-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_16/scaffold_16_14682616-14867666

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Couldn't classify 102273, 102405
Couldn't classify 105019, 105145
Sorry, prediction pasa_asmbl_17515.p1 fails validation.
(CTG)	 AG	102273-102405	GT	AGG
(TGG)	 AG	102600-102709	GT	AGG
(GCG)	 AG	103147-103272	GT	TGG
(GTG)	 AG	103799-103848	GT	AGG
(GTG)	 AG	103997-104090	GT	AGG
(GCC)	 AG	104273-104379	GT	CAG
(GCT)	 AG	104583-104717	GT	AAG
(GTT)	 AG	105019-105145	GT	AGG
-recovered pasa_asmbl_17515.p1, internal, 102273, 102405
-recovered pasa_asmbl_17515.p1, internal, 102600, 102709
-recovered pasa_asmbl_17515.p1, internal, 103147, 103272
-recovered pasa_asmbl_17515.p1, internal, 103799, 103848
-recovered pasa_asmbl_17515.p1, internal, 103997, 104090
-recovered pasa_asmbl_17515.p1, internal, 104273, 104379
-recovered pasa_asmbl_17515.p1, internal, 104583, 104717
-recovered pasa_asmbl_17515.p1, internal, 105019, 105145
Valid prediction for GeneMark_model.69466_t
Valid prediction for GeneMark_model.69478_t
Valid prediction for Augustus_model.g27074.t1
Valid prediction for GeneMark_model.69454_t
Couldn't classify 20299, 20362
Sorry, prediction pasa_asmbl_17507.p1 fails validation.
(AGG)	 CC	20299-20362	GT	CGG
(GCA)	 AG	23347-23391	GT	ATG
(CCA)	 AG	24183-24341	GT	TGG
(GGT)	 AG	25471-25580	GT	AGG
(AGG)	 AG	26149-26247	TA	AGT
-recovered pasa_asmbl_17507.p1, terminal, 26149, 26247
-recovered pasa_asmbl_17507.p1, internal, 23347, 23391
-recovered pasa_asmbl_17507.p1, internal, 24183, 24341
-recovered pasa_asmbl_17507.p1, internal, 25471, 25580
Valid prediction for GeneMark_model.69461_t
Valid prediction for snap_scaffold_16-snap.2849-T1
Valid prediction for GlimmerHMM_glimmerT_40354-T1
Valid prediction for GlimmerHMM_glimmerT_40362-T1
Valid prediction for snap_scaffold_16-snap.2880-T1
Valid prediction for GeneMark_model.69448_t
Valid prediction for GlimmerHMM_glimmerT_40361-T1
Valid prediction for GlimmerHMM_glimmerT_40360-T1
Valid prediction for Augustus_model.g27082.t1
Valid prediction for GeneMark_model.69442_t
Valid prediction for Augustus_model.g27072.t1
Valid prediction for GeneMark_model.69428_t
Valid prediction for snap_scaffold_16-snap.2847-T1
Couldn't classify 133068, 133475
Sorry, prediction pasa_asmbl_16684.p1 fails validation.
(CTC)	 CC	133068-133475	TG	AGT
Valid prediction for GeneMark_model.69445_t
Valid prediction for GeneMark_model.69460_t
Valid prediction for GeneMark_model.69473_t
Valid prediction for snap_scaffold_16-snap.2876-T1
Valid prediction for GeneMark_model.69434_t
Valid prediction for GeneMark_model.69440_t
Valid prediction for snap_scaffold_16-snap.2867-T1
Valid prediction for GeneMark_model.69477_t
Valid prediction for Augustus_model.g27076.t1
Valid prediction for GlimmerHMM_glimmerT_40363-T1
Valid prediction for snap_scaffold_16-snap.2846-T1
Valid prediction for snap_scaffold_16-snap.2844-T1
Valid prediction for GeneMark_model.69463_t
Valid prediction for GeneMark_model.69458_t
Valid prediction for Augustus_model.g27077.t1
Valid prediction for snap_scaffold_16-snap.2856-T1
Valid prediction for Augustus_model.g27088.t1
Valid prediction for GlimmerHMM_glimmerT_40366-T1
Valid prediction for snap_scaffold_16-snap.2871-T1
Valid prediction for GeneMark_model.69431_t
Couldn't classify 31807, 31950
Sorry, prediction pasa_asmbl_17512.p2 fails validation.
(ATG)	 CG	27463-27604	GT	GGG
(TCT)	 AG	28208-28378	GT	TGG
(GAG)	 AG	29983-30080	GT	TGG
(GGC)	 AG	31807-31950	GG	TTG
-recovered pasa_asmbl_17512.p2, initial, 27463, 27604
-recovered pasa_asmbl_17512.p2, internal, 28208, 28378
-recovered pasa_asmbl_17512.p2, internal, 29983, 30080
Valid prediction for snap_scaffold_16-snap.2869-T1
Valid prediction for Augustus_model.g27081.t1
Valid prediction for GlimmerHMM_glimmerT_40352-T1
Valid prediction for snap_scaffold_16-snap.2866-T1
Valid prediction for snap_scaffold_16-snap.2873-T1
Valid prediction for Augustus_model.g27071.t1
Valid prediction for GeneMark_model.69464_t
Valid prediction for snap_scaffold_16-snap.2881-T1
Valid prediction for GlimmerHMM_glimmerT_40369-T1
Valid prediction for snap_scaffold_16-snap.2858-T1
Valid prediction for GeneMark_model.69437_t
Valid prediction for snap_scaffold_16-snap.2861-T1
Valid prediction for snap_scaffold_16-snap.2863-T1
Valid prediction for GeneMark_model.69450_t
Couldn't classify 101443, 101568
Sorry, prediction pasa_asmbl_17540.p1 fails validation.
(ATG)	 AT	96296-96319	GT	AGG
(GTG)	 AG	97510-97629	GT	GGG
(ATC)	 AG	99500-99662	GT	AGG
(GGT)	 AG	99959-100116	GT	AGG
(GTG)	 AG	100827-100955	GT	AGG
(GCT)	 AG	101443-101568	TC	CCT
-recovered pasa_asmbl_17540.p1, initial, 96296, 96319
-recovered pasa_asmbl_17540.p1, internal, 97510, 97629
-recovered pasa_asmbl_17540.p1, internal, 99500, 99662
-recovered pasa_asmbl_17540.p1, internal, 99959, 100116
-recovered pasa_asmbl_17540.p1, internal, 100827, 100955
Valid prediction for snap_scaffold_16-snap.2879-T1
Valid prediction for GlimmerHMM_glimmerT_40358-T1
Valid prediction for GeneMark_model.69469_t
Valid prediction for GlimmerHMM_glimmerT_40349-T1
Valid prediction for GeneMark_model.69467_t
Valid prediction for snap_scaffold_16-snap.2870-T1
Valid prediction for snap_scaffold_16-snap.2851-T1
Valid prediction for GeneMark_model.69456_t
Valid prediction for GeneMark_model.69482_t
Valid prediction for GeneMark_model.69474_t
Valid prediction for Augustus_model.g27084.t1
Valid prediction for GeneMark_model.69479_t
Valid prediction for GeneMark_model.69476_t
Valid prediction for GeneMark_model.69452_t

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for GeneMark_model.69432_t
Valid prediction for snap_scaffold_16-snap.2855-T1
Valid prediction for HiQ_model.g27080.t1
Valid prediction for CodingQuarry_transcript_20100-T1
Valid prediction for GeneMark_model.69438_t
Valid prediction for GlimmerHMM_glimmerT_40347-T1
Valid prediction for Augustus_model.g27085.t1
Valid prediction for snap_scaffold_16-snap.2868-T1
Valid prediction for snap_scaffold_16-snap.2864-T1
Valid prediction for GlimmerHMM_glimmerT_40350-T1
Valid prediction for Augustus_model.g27075.t1
Valid prediction for snap_scaffold_16-snap.2854-T1
Valid prediction for GeneMark_model.69462_t
Valid prediction for GeneMark_model.69425_t
Valid prediction for Augustus_model.g27083.t1
Valid prediction for GlimmerHMM_glimmerT_40359-T1
Valid prediction for GeneMark_model.69459_t
Valid prediction for snap_scaffold_16-snap.2852-T1
Valid prediction for GeneMark_model.69447_t
Valid prediction for GeneMark_model.69436_t
Valid prediction for GlimmerHMM_glimmerT_40364-T1
Valid prediction for snap_scaffold_16-snap.2865-T1
Valid prediction for GeneMark_model.69481_t
Valid prediction for HiQ_model.g27078.t1
Valid prediction for GlimmerHMM_glimmerT_40370-T1
Valid prediction for Augustus_model.g27087.t1
Valid prediction for snap_scaffold_16-snap.2857-T1
Sorry, intron length (9) is less than minimum required (10)
Valid prediction for GlimmerHMM_glimmerT_40368-T1
Valid prediction for GeneMark_model.69444_t
Valid prediction for GlimmerHMM_glimmerT_40348-T1
Valid prediction for GlimmerHMM_glimmerT_40356-T1
Valid prediction for GeneMark_model.69472_t
Valid prediction for HiQ_model.g27089.t1
Valid prediction for GeneMark_model.69426_t
Valid prediction for Augustus_model.g27086.t1
Valid prediction for GeneMark_model.69439_t
Valid prediction for GeneMark_model.69453_t
Valid prediction for GeneMark_model.69468_t
Valid prediction for snap_scaffold_16-snap.2859-T1
Valid prediction for GlimmerHMM_glimmerT_40365-T1
Valid prediction for pasa_asmbl_16686.p1
Valid prediction for GeneMark_model.69449_t
Valid prediction for Augustus_model.g27079.t1
Valid prediction for GlimmerHMM_glimmerT_40353-T1
Valid prediction for GlimmerHMM_glimmerT_40355-T1
Valid prediction for GeneMark_model.69446_t
Valid prediction for GlimmerHMM_glimmerT_40367-T1
Valid prediction for GeneMark_model.69455_t
Valid prediction for GeneMark_model.69480_t
Valid prediction for GeneMark_model.69470_t
Couldn't classify 50905, 51021
Sorry, prediction pasa_asmbl_16685.p1 fails validation.
(ATG)	 AA	46183-46266	GT	AGG
(CTC)	 AG	47012-47209	GT	AGG
(GAC)	 AG	50171-50266	GT	TCG
(GTG)	 AG	50905-51021	AG	ACA
-recovered pasa_asmbl_16685.p1, initial, 46183, 46266
-recovered pasa_asmbl_16685.p1, internal, 47012, 47209
-recovered pasa_asmbl_16685.p1, internal, 50171, 50266
Valid prediction for snap_scaffold_16-snap.2862-T1
Valid prediction for Augustus_model.g27073.t1
Valid prediction for snap_scaffold_16-snap.2848-T1
Valid prediction for GeneMark_model.69483_t
Valid prediction for GlimmerHMM_glimmerT_40346-T1
Valid prediction for GeneMark_model.69451_t
Valid prediction for GeneMark_model.69475_t
Valid prediction for HiQ_model.g27069.t1
Valid prediction for GlimmerHMM_glimmerT_40357-T1
Valid prediction for Augustus_model.g27070.t1
Couldn't classify 101684, 101883
Sorry, prediction pasa_asmbl_16680.p1 fails validation.
(AAA)	 GC	101684-101883	GT	TGG
(GTG)	 AG	102900-103052	GT	ACG
(ACT)	 AG	103318-103423	GT	AGG
(GAG)	 AG	103878-103974	GT	AGG
(GAT)	 AG	104625-104740	GT	AGG
(GTG)	 AG	105665-105751	GT	AGG
(ACA)	 AG	105983-106135	GT	AGG
(ACA)	 AG	106587-106669	GT	TGG
(GTG)	 AG	106774-106903	GT	CGG
(GTC)	 AG	108332-108454	CA	AGC
-recovered pasa_asmbl_16680.p1, terminal, 108332, 108454
-recovered pasa_asmbl_16680.p1, internal, 102900, 103052
-recovered pasa_asmbl_16680.p1, internal, 103318, 103423
-recovered pasa_asmbl_16680.p1, internal, 103878, 103974
-recovered pasa_asmbl_16680.p1, internal, 104625, 104740
-recovered pasa_asmbl_16680.p1, internal, 105665, 105751
-recovered pasa_asmbl_16680.p1, internal, 105983, 106135
-recovered pasa_asmbl_16680.p1, internal, 106587, 106669
-recovered pasa_asmbl_16680.p1, internal, 106774, 106903
Valid prediction for snap_scaffold_16-snap.2877-T1
Valid prediction for CodingQuarry_transcript_20099-T1
Valid prediction for GeneMark_model.69457_t
Valid prediction for pasa_asmbl_16682.p1
Valid prediction for snap_scaffold_16-snap.2853-T1
Valid prediction for snap_scaffold_16-snap.2872-T1
Valid prediction for snap_scaffold_16-snap.2843-T1
Valid prediction for GeneMark_model.69430_t
Valid prediction for GeneMark_model.69427_t
Valid prediction for GeneMark_model.69435_t
Valid prediction for snap_scaffold_16-snap.2882-T1
Valid prediction for snap_scaffold_16-snap.2874-T1
Valid prediction for GeneMark_model.69443_t
Valid prediction for GeneMark_model.69441_t
Valid prediction for GeneMark_model.69471_t
Valid prediction for GeneMark_model.69429_t
Valid prediction for snap_scaffold_16-snap.2860-T1
Valid prediction for snap_scaffold_16-snap.2875-T1
Valid prediction for snap_scaffold_16-snap.2845-T1
Valid prediction for snap_scaffold_16-snap.2878-T1
Valid prediction for snap_scaffold_16-snap.2850-T1
Valid prediction for GeneMark_model.69465_t
Valid prediction for GlimmerHMM_glimmerT_40351-T1
Couldn't classify 180271, 180320
Sorry, prediction pasa_asmbl_16679.p1 fails validation.
(CAG)	 AC	180271-180320	GT	GAG
(GTC)	 AG	180793-181022	GT	AGG
(AGG)	 AG	181939-182027	TG	GAT
-recovered pasa_asmbl_16679.p1, terminal, 181939, 182027
-recovered pasa_asmbl_16679.p1, internal, 180793, 181022

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 7965, rend_intergenic: 3708  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 9599, rend_intergenic: 9071  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 15329, rend_intergenic: 9615  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 26247, rend_intergenic: 21193  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 35431, rend_intergenic: 28116  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 41521, rend_intergenic: 37413  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 50044, rend_intergenic: 48474  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 54990, rend_intergenic: 50245  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 74143, rend_intergenic: 62591  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 82256, rend_intergenic: 78137  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 111595, rend_intergenic: 97480  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 130695, rend_intergenic: 124391  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 137938, rend_intergenic: 134004  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 148786, rend_intergenic: 140626  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 167696, rend_intergenic: 148847  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 175681, rend_intergenic: 167854  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 179587, rend_intergenic: 175968  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 185051
-exon list size: 769


building trellis

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56.7    
56.8    
56.9    
57.1    
57.2    
57.3    
57.5    
57.6    
57.7    
57.8    
58.0    
58.1    
58.2    
58.4    
58.5    
58.6    
58.8    
58.9    
59.0    
59.1    
59.3    
59.4    
59.5    
59.7    
59.8    
59.9    
60.1    
60.2    
60.3    
60.4    
60.6    
60.7    
60.8    
61.0    
61.1    
61.2    
61.3    
61.5    
61.6    
61.7    
61.9    
62.0    
62.1    
62.3    
62.4    
62.5    
62.6    
62.8    
62.9    
63.0    
63.2    
63.3    
63.4    
63.6    
63.7    
63.8    
63.9    
64.1    
64.2    
64.3    
64.5    
64.6    
64.7    
64.9    
65.0    
65.1    
65.2    
65.4    
65.5    
65.6    
65.8    
65.9    
66.0    
66.1    
66.3    
66.4    
66.5    
66.7    
66.8    
66.9    
67.1    
67.2    
67.3    
67.4    
67.6    
67.7    
67.8    
68.0    
68.1    
68.2    
68.4    
68.5    
68.6    
68.7    
68.9    
69.0    
69.1    
69.3    
69.4    
69.5    
69.6    
69.8    
69.9    
70.0    
70.2    
70.3    
70.4    
70.6    
70.7    
70.8    
70.9    
71.1    
71.2    
71.3    
71.5    
71.6    
71.7    
71.9    
72.0    
72.1    
72.2    
72.4    
72.5    
72.6    
72.8    
72.9    
73.0    
73.2    
73.3    
73.4    
73.5    
73.7    
73.8    
73.9    
74.1    
74.2    
74.3    
74.4    
74.6    
74.7    
74.8    
75.0    
75.1    
75.2    
75.4    
75.5    
75.6    
75.7    
75.9    
76.0    
76.1    
76.3    
76.4    
76.5    
76.7    
76.8    
76.9    
77.0    
77.2    
77.3    
77.4    
77.6    
77.7    
77.8    
78.0    
78.1    
78.2    
78.3    
78.5    
78.6    
78.7    
78.9    
79.0    
79.1    
79.2    
79.4    
79.5    
79.6    
79.8    
79.9    
80.0    
80.2    
80.3    
80.4    
80.5    
80.7    
80.8    
80.9    
81.1    
81.2    
81.3    
81.5    
81.6    
81.7    
81.8    
82.0    
82.1    
82.2    
82.4    
82.5    
82.6    
82.7    
82.9    
83.0    
83.1    
83.3    
83.4    
83.5    
83.7    
83.8    
83.9    
84.0    
84.2    
84.3    
84.4    
84.6    
84.7    
84.8    
85.0    
85.1    
85.2    
85.3    
85.5    
85.6    
85.7    
85.9    
86.0    
86.1    
86.3    
86.4    
86.5    
86.6    
86.8    
86.9    
87.0    
87.2    
87.3    
87.4    
87.5    
87.7    
87.8    
87.9    
88.1    
88.2    
88.3    
88.5    
88.6    
88.7    
88.8    
89.0    
89.1    
89.2    
89.4    
89.5    
89.6    
89.8    
89.9    
90.0    
90.1    
90.3    
90.4    
90.5    
90.7    
90.8    
90.9    
91.1    
91.2    
91.3    
91.4    
91.6    
91.7    
91.8    
92.0    
92.1    
92.2    
92.3    
92.5    
92.6    
92.7    
92.9    
93.0    
93.1    
93.3    
93.4    
93.5    
93.6    
93.8    
93.9    
94.0    
94.2    
94.3    
94.4    
94.6    
94.7    
94.8    
94.9    
95.1    
95.2    
95.3    
95.5    
95.6    
95.7    
95.8    
96.0    
96.1    
96.2    
96.4    
96.5    
96.6    
96.8    
96.9    
97.0    
97.1    
97.3    
97.4    
97.5    
97.7    
97.8    
97.9    
98.1    
98.2    
98.3    
98.4    
98.6    
98.7    
98.8    
99.0    
99.1    
99.2    
99.4    
99.5    
99.6    
99.7    
99.9    
-found 34 predictions from path traversal
Error with prediction: snap lend_intergenic: 7965, rend_intergenic: 3708  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 9599, rend_intergenic: 9071  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 15329, rend_intergenic: 9615  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 26247, rend_intergenic: 21193  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 35431, rend_intergenic: 28116  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 41521, rend_intergenic: 37413  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 50044, rend_intergenic: 48474  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 54990, rend_intergenic: 50245  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 74143, rend_intergenic: 62591  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 82256, rend_intergenic: 78137  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 111595, rend_intergenic: 97480  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 130695, rend_intergenic: 124391  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 137938, rend_intergenic: 134004  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 148786, rend_intergenic: 140626  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 167696, rend_intergenic: 148847  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 175681, rend_intergenic: 167854  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 179587, rend_intergenic: 175968  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 19 predictions persist after filtering for low support