-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_16/scaffold_16_13764328-13964989

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for GeneMark_model.69168_t
Valid prediction for snap_scaffold_16-snap.2672-T1
Couldn't classify 151467, 151565
Sorry, prediction pasa_asmbl_17464.p1 fails validation.
(GAG)	 CT	151467-151565	GT	ATG
(GCC)	 AG	154440-154553	GT	AGG
(TTC)	 AG	155377-155617	GT	CAG
(GTG)	 AG	155885-155988	GT	GGG
(GCA)	 AG	156240-156320	CC	AGC
-recovered pasa_asmbl_17464.p1, terminal, 156240, 156320
-recovered pasa_asmbl_17464.p1, internal, 154440, 154553
-recovered pasa_asmbl_17464.p1, internal, 155377, 155617
-recovered pasa_asmbl_17464.p1, internal, 155885, 155988
Valid prediction for GlimmerHMM_glimmerT_40241-T1
Valid prediction for GeneMark_model.69164_t
Valid prediction for GeneMark_model.69165_t
Valid prediction for snap_scaffold_16-snap.2670-T1
Valid prediction for GeneMark_model.69151_t
Valid prediction for GeneMark_model.69195_t
Valid prediction for GlimmerHMM_glimmerT_40252-T1
Valid prediction for GeneMark_model.69197_t
Valid prediction for snap_scaffold_16-snap.2692-T1
Valid prediction for snap_scaffold_16-snap.2666-T1
Valid prediction for GeneMark_model.69181_t
Valid prediction for snap_scaffold_16-snap.2685-T1
Valid prediction for GeneMark_model.69171_t
Valid prediction for GlimmerHMM_glimmerT_40259-T1
Valid prediction for GeneMark_model.69167_t
Valid prediction for snap_scaffold_16-snap.2682-T1
Valid prediction for GeneMark_model.69144_t
Valid prediction for GeneMark_model.69199_t
Valid prediction for snap_scaffold_16-snap.2696-T1
Valid prediction for snap_scaffold_16-snap.2675-T1
Valid prediction for GlimmerHMM_glimmerT_40240-T1
Valid prediction for GlimmerHMM_glimmerT_40245-T1
Valid prediction for snap_scaffold_16-snap.2684-T1
Valid prediction for snap_scaffold_16-snap.2680-T1
Valid prediction for Augustus_model.g27007.t1
Valid prediction for GeneMark_model.69193_t
Valid prediction for snap_scaffold_16-snap.2689-T1
Valid prediction for snap_scaffold_16-snap.2673-T1
Valid prediction for GeneMark_model.69187_t
Valid prediction for GeneMark_model.69162_t
Valid prediction for snap_scaffold_16-snap.2691-T1
Valid prediction for GeneMark_model.69207_t
Valid prediction for GeneMark_model.69154_t
Valid prediction for snap_scaffold_16-snap.2687-T1
Valid prediction for snap_scaffold_16-snap.2664-T1
Sorry, intron length (3) is less than minimum required (10)
Valid prediction for GeneMark_model.69189_t
Valid prediction for GeneMark_model.69174_t
Valid prediction for GeneMark_model.69142_t
Valid prediction for GeneMark_model.69157_t
Valid prediction for GeneMark_model.69160_t
Valid prediction for GeneMark_model.69179_t
Valid prediction for GlimmerHMM_glimmerT_40239-T1
Valid prediction for GeneMark_model.69191_t
Valid prediction for snap_scaffold_16-snap.2660-T1
Valid prediction for snap_scaffold_16-snap.2665-T1
Valid prediction for GlimmerHMM_glimmerT_40237-T1
Valid prediction for snap_scaffold_16-snap.2655-T1
Valid prediction for snap_scaffold_16-snap.2659-T1
Valid prediction for GeneMark_model.69202_t
Valid prediction for Augustus_model.g27002.t1
Valid prediction for GeneMark_model.69139_t
Valid prediction for GeneMark_model.69150_t
Valid prediction for GlimmerHMM_glimmerT_40253-T1
Valid prediction for GeneMark_model.69172_t
Valid prediction for GeneMark_model.69178_t
Valid prediction for GeneMark_model.69146_t
Valid prediction for snap_scaffold_16-snap.2654-T1
Valid prediction for GeneMark_model.69200_t
Valid prediction for GlimmerHMM_glimmerT_40238-T1
Valid prediction for snap_scaffold_16-snap.2688-T1
Valid prediction for HiQ_model.g27008.t1
Valid prediction for GeneMark_model.69204_t
Valid prediction for GeneMark_model.69183_t
Valid prediction for GeneMark_model.69205_t
Valid prediction for GeneMark_model.69141_t
Valid prediction for GeneMark_model.69177_t
Valid prediction for snap_scaffold_16-snap.2668-T1
Valid prediction for GlimmerHMM_glimmerT_40250-T1
Valid prediction for GeneMark_model.69148_t
Valid prediction for GeneMark_model.69152_t
Valid prediction for GlimmerHMM_glimmerT_40254-T1
Valid prediction for snap_scaffold_16-snap.2678-T1
Valid prediction for GeneMark_model.69175_t

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for GlimmerHMM_glimmerT_40255-T1
Valid prediction for GeneMark_model.69206_t
Valid prediction for snap_scaffold_16-snap.2658-T1
Valid prediction for snap_scaffold_16-snap.2697-T1
Valid prediction for GeneMark_model.69184_t
Valid prediction for GlimmerHMM_glimmerT_40243-T1
Valid prediction for snap_scaffold_16-snap.2667-T1
Valid prediction for CodingQuarry_transcript_20082-T1
Valid prediction for GeneMark_model.69159_t
Valid prediction for snap_scaffold_16-snap.2677-T1
Valid prediction for GlimmerHMM_glimmerT_40248-T1
Valid prediction for Augustus_model.g27000.t1
Valid prediction for Augustus_model.g27006.t1
Valid prediction for HiQ_model.g27010.t1
Valid prediction for snap_scaffold_16-snap.2695-T1
Valid prediction for snap_scaffold_16-snap.2698-T1
Valid prediction for snap_scaffold_16-snap.2681-T1
Valid prediction for CodingQuarry_transcript_20083-T1
Valid prediction for snap_scaffold_16-snap.2663-T1
Valid prediction for GeneMark_model.69153_t
Valid prediction for snap_scaffold_16-snap.2679-T1
Valid prediction for CodingQuarry_transcript_20081-T1
Valid prediction for HiQ_model.g27003.t1
Valid prediction for GlimmerHMM_glimmerT_40258-T1
Valid prediction for GlimmerHMM_glimmerT_40244-T1
Valid prediction for pasa_asmbl_16762.p1
Valid prediction for snap_scaffold_16-snap.2656-T1
Valid prediction for snap_scaffold_16-snap.2699-T1
Valid prediction for GeneMark_model.69209_t
Valid prediction for GeneMark_model.69201_t
Valid prediction for GeneMark_model.69173_t
Valid prediction for GeneMark_model.69145_t
Valid prediction for snap_scaffold_16-snap.2674-T1
Valid prediction for GlimmerHMM_glimmerT_40236-T1
Couldn't classify 22860, 22875
Sorry, prediction pasa_asmbl_16597.p1 fails validation.
(GAA)	 TA	22860-22875	GT	ATG
(TTT)	 AG	23238-23334	GT	AGG
(GTC)	 AG	23656-23711	GT	AGG
(ATG)	 AG	24082-24132	GT	TGG
(CTA)	 AG	25336-25444	GT	AAG
(AAC)	 AG	25875-25920	GT	AGG
(GCC)	 AG	26739-26837	GT	AGG
(GTT)	 AG	27341-27421	GT	GGG
(AAC)	 AG	28106-28420	CC	GAC
add_exon() Sorry, pasa_asmbl_16597.p1 24082-24132-initial-1 is invalid.
-recovered pasa_asmbl_16597.p1, initial, 24082, 24132
-recovered pasa_asmbl_16597.p1, terminal, 28106, 28420
-recovered pasa_asmbl_16597.p1, internal, 23238, 23334
-recovered pasa_asmbl_16597.p1, internal, 23656, 23711
-recovered pasa_asmbl_16597.p1, internal, 24082, 24132
-recovered pasa_asmbl_16597.p1, internal, 25336, 25444
-recovered pasa_asmbl_16597.p1, internal, 25875, 25920
-recovered pasa_asmbl_16597.p1, internal, 26739, 26837
-recovered pasa_asmbl_16597.p1, internal, 27341, 27421
Valid prediction for GeneMark_model.69188_t
Valid prediction for snap_scaffold_16-snap.2669-T1
Valid prediction for Augustus_model.g27005.t1
Valid prediction for GeneMark_model.69176_t
Valid prediction for snap_scaffold_16-snap.2671-T1
Valid prediction for GeneMark_model.69190_t
Valid prediction for GeneMark_model.69170_t
Valid prediction for GeneMark_model.69140_t
Valid prediction for GlimmerHMM_glimmerT_40246-T1
Valid prediction for GeneMark_model.69143_t
Valid prediction for snap_scaffold_16-snap.2683-T1
Valid prediction for HiQ_model.g27011.t1
Valid prediction for GlimmerHMM_glimmerT_40233-T1
Valid prediction for GeneMark_model.69182_t
Valid prediction for GeneMark_model.69163_t
Valid prediction for snap_scaffold_16-snap.2686-T1
Valid prediction for GeneMark_model.69166_t
Valid prediction for GeneMark_model.69149_t
Valid prediction for GlimmerHMM_glimmerT_40249-T1
Valid prediction for snap_scaffold_16-snap.2690-T1
Valid prediction for GeneMark_model.69208_t
Valid prediction for GeneMark_model.69147_t
Valid prediction for HiQ_model.g27004.t1
Valid prediction for GeneMark_model.69155_t
Valid prediction for GeneMark_model.69203_t
Valid prediction for GlimmerHMM_glimmerT_40256-T1
Valid prediction for snap_scaffold_16-snap.2694-T1
Valid prediction for snap_scaffold_16-snap.2676-T1
Valid prediction for GeneMark_model.69196_t
Valid prediction for CodingQuarry_transcript_20084-T1
Valid prediction for Augustus_model.g27001.t1
Valid prediction for pasa_asmbl_16598.p1
Valid prediction for Augustus_model.g27009.t1
Valid prediction for GeneMark_model.69192_t
Valid prediction for GeneMark_model.69180_t
Valid prediction for GlimmerHMM_glimmerT_40234-T1
Valid prediction for GlimmerHMM_glimmerT_40251-T1
Valid prediction for GeneMark_model.69198_t
Valid prediction for GlimmerHMM_glimmerT_40257-T1
Valid prediction for GeneMark_model.69194_t
Valid prediction for GlimmerHMM_glimmerT_40235-T1
Valid prediction for GeneMark_model.69186_t
Valid prediction for snap_scaffold_16-snap.2693-T1
Valid prediction for snap_scaffold_16-snap.2657-T1
Valid prediction for GeneMark_model.69158_t
Valid prediction for GlimmerHMM_glimmerT_40247-T1
Valid prediction for GlimmerHMM_glimmerT_40242-T1
Valid prediction for snap_scaffold_16-snap.2662-T1
Valid prediction for GeneMark_model.69156_t
Valid prediction for GeneMark_model.69161_t
Valid prediction for GeneMark_model.69169_t
Valid prediction for snap_scaffold_16-snap.2661-T1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 25358, rend_intergenic: 13263  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 31688, rend_intergenic: 26529  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 37012, rend_intergenic: 31774  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 48562, rend_intergenic: 43777  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 73536, rend_intergenic: 60648  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 91776, rend_intergenic: 89247  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 95852, rend_intergenic: 92763  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 99009, rend_intergenic: 97360  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 101430, rend_intergenic: 99787  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 104135, rend_intergenic: 102233  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 111425, rend_intergenic: 106076  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 115213, rend_intergenic: 112297  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 119392, rend_intergenic: 115859  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 123093, rend_intergenic: 121150  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 133178, rend_intergenic: 123495  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 156320, rend_intergenic: 140855  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 157646, rend_intergenic: 156768  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 167886, rend_intergenic: 163291  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 174626, rend_intergenic: 172303  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 200662
-exon list size: 831


building trellis

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69.7    
69.9    
70.0    
70.1    
70.2    
70.3    
70.5    
70.6    
70.7    
70.8    
70.9    
71.1    
71.2    
71.3    
71.4    
71.5    
71.7    
71.8    
71.9    
72.0    
72.1    
72.3    
72.4    
72.5    
72.6    
72.7    
72.9    
73.0    
73.1    
73.2    
73.3    
73.5    
73.6    
73.7    
73.8    
73.9    
74.1    
74.2    
74.3    
74.4    
74.5    
74.7    
74.8    
74.9    
75.0    
75.2    
75.3    
75.4    
75.5    
75.6    
75.8    
75.9    
76.0    
76.1    
76.2    
76.4    
76.5    
76.6    
76.7    
76.8    
77.0    
77.1    
77.2    
77.3    
77.4    
77.6    
77.7    
77.8    
77.9    
78.0    
78.2    
78.3    
78.4    
78.5    
78.6    
78.8    
78.9    
79.0    
79.1    
79.2    
79.4    
79.5    
79.6    
79.7    
79.8    
80.0    
80.1    
80.2    
80.3    
80.4    
80.6    
80.7    
80.8    
80.9    
81.0    
81.2    
81.3    
81.4    
81.5    
81.6    
81.8    
81.9    
82.0    
82.1    
82.2    
82.4    
82.5    
82.6    
82.7    
82.8    
83.0    
83.1    
83.2    
83.3    
83.4    
83.6    
83.7    
83.8    
83.9    
84.0    
84.2    
84.3    
84.4    
84.5    
84.6    
84.8    
84.9    
85.0    
85.1    
85.2    
85.4    
85.5    
85.6    
85.7    
85.8    
86.0    
86.1    
86.2    
86.3    
86.4    
86.6    
86.7    
86.8    
86.9    
87.0    
87.2    
87.3    
87.4    
87.5    
87.6    
87.8    
87.9    
88.0    
88.1    
88.2    
88.4    
88.5    
88.6    
88.7    
88.8    
89.0    
89.1    
89.2    
89.3    
89.4    
89.6    
89.7    
89.8    
89.9    
90.0    
90.2    
90.3    
90.4    
90.5    
90.6    
90.8    
90.9    
91.0    
91.1    
91.2    
91.4    
91.5    
91.6    
91.7    
91.8    
92.0    
92.1    
92.2    
92.3    
92.4    
92.6    
92.7    
92.8    
92.9    
93.0    
93.2    
93.3    
93.4    
93.5    
93.6    
93.8    
93.9    
94.0    
94.1    
94.2    
94.4    
94.5    
94.6    
94.7    
94.8    
95.0    
95.1    
95.2    
95.3    
95.4    
95.6    
95.7    
95.8    
95.9    
96.0    
96.2    
96.3    
96.4    
96.5    
96.6    
96.8    
96.9    
97.0    
97.1    
97.2    
97.4    
97.5    
97.6    
97.7    
97.8    
98.0    
98.1    
98.2    
98.3    
98.4    
98.6    
98.7    
98.8    
98.9    
99.0    
99.2    
99.3    
99.4    
99.5    
99.6    
99.8    
99.9    
-found 35 predictions from path traversal
Error with prediction: snap lend_intergenic: 25358, rend_intergenic: 13263  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 31688, rend_intergenic: 26529  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 37012, rend_intergenic: 31774  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 48562, rend_intergenic: 43777  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 73536, rend_intergenic: 60648  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 91776, rend_intergenic: 89247  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 95852, rend_intergenic: 92763  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 99009, rend_intergenic: 97360  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 101430, rend_intergenic: 99787  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 104135, rend_intergenic: 102233  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 111425, rend_intergenic: 106076  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 115213, rend_intergenic: 112297  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 119392, rend_intergenic: 115859  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 123093, rend_intergenic: 121150  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 133178, rend_intergenic: 123495  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 156320, rend_intergenic: 140855  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 157646, rend_intergenic: 156768  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 167886, rend_intergenic: 163291  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 174626, rend_intergenic: 172303  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 17 predictions persist after filtering for low support

-building DP trellis

-building trellis in range 1 - 22291
-exon list size: 85


building trellis

1.1    
2.3    
3.4    
4.6    
5.7    
6.9    
8.0    
9.2    
10.3    
11.5    
12.6    
13.8    
14.9    
16.1    
17.2    
18.4    
19.5    
20.7    
21.8    
23.0    
24.1    
25.3    
26.4    
27.6    
28.7    
29.9    
31.0    
32.2    
33.3    
34.5    
35.6    
36.8    
37.9    
39.1    
40.2    
41.4    
42.5    
43.7    
44.8    
46.0    
47.1    
48.3    
49.4    
50.6    
51.7    
52.9    
54.0    
55.2    
56.3    
57.5    
58.6    
59.8    
60.9    
62.1    
63.2    
64.4    
65.5    
66.7    
67.8    
69.0    
70.1    
71.3    
72.4    
73.6    
74.7    
75.9    
77.0    
78.2    
79.3    
80.5    
81.6    
82.8    
83.9    
85.1    
86.2    
87.4    
88.5    
89.7    
90.8    
92.0    
93.1    
94.3    
95.4    
96.6    
97.7    
98.9    
-found 7 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support

-building DP trellis

-building trellis in range 1 - 13765
-exon list size: 39


building trellis

2.4    
4.9    
7.3    
9.8    
12.2    
14.6    
17.1    
19.5    
22.0    
24.4    
26.8    
29.3    
31.7    
34.1    
36.6    
39.0    
41.5    
43.9    
46.3    
48.8    
51.2    
53.7    
56.1    
58.5    
61.0    
63.4    
65.9    
68.3    
70.7    
73.2    
75.6    
78.0    
80.5    
82.9    
85.4    
87.8    
90.2    
92.7    
95.1    
97.6    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support

-building DP trellis

-building trellis in range 1 - 11885
-exon list size: 34


building trellis

2.8    
5.6    
8.3    
11.1    
13.9    
16.7    
19.4    
22.2    
25.0    
27.8    
30.6    
33.3    
36.1    
38.9    
41.7    
44.4    
47.2    
50.0    
52.8    
55.6    
58.3    
61.1    
63.9    
66.7    
69.4    
72.2    
75.0    
77.8    
80.6    
83.3    
86.1    
88.9    
91.7    
94.4    
97.2    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support

-building DP trellis

-building trellis in range 187660 - 200662
-exon list size: 32


building trellis

2.9    
5.9    
8.8    
11.8    
14.7    
17.6    
20.6    
23.5    
26.5    
29.4    
32.4    
35.3    
38.2    
41.2    
44.1    
47.1    
50.0    
52.9    
55.9    
58.8    
61.8    
64.7    
67.6    
70.6    
73.5    
76.5    
79.4    
82.4    
85.3    
88.2    
91.2    
94.1    
97.1    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support

-building DP trellis

-building trellis in range 187660 - 198277
-exon list size: 23


building trellis

4.0    
8.0    
12.0    
16.0    
20.0    
24.0    
28.0    
32.0    
36.0    
40.0    
44.0    
48.0    
52.0    
56.0    
60.0    
64.0    
68.0    
72.0    
76.0    
80.0    
84.0    
88.0    
92.0    
96.0    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support

-building DP trellis

-building trellis in range 187660 - 198248
-exon list size: 22


building trellis

4.2    
8.3    
12.5    
16.7    
20.8    
25.0    
29.2    
33.3    
37.5    
41.7    
45.8    
50.0    
54.2    
58.3    
62.5    
66.7    
70.8    
75.0    
79.2    
83.3    
87.5    
91.7    
95.8    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support

-building DP trellis

-building trellis in range 187660 - 197983
-exon list size: 19


building trellis

4.8    
9.5    
14.3    
19.0    
23.8    
28.6    
33.3    
38.1    
42.9    
47.6    
52.4    
57.1    
61.9    
66.7    
71.4    
76.2    
81.0    
85.7    
90.5    
95.2    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support