-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_16/scaffold_16_12579729-12821592

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for GeneMark_model.68783_t
Valid prediction for GeneMark_model.68816_t
Valid prediction for GeneMark_model.68775_t
Valid prediction for GeneMark_model.68805_t
Valid prediction for GeneMark_model.68772_t
Valid prediction for GeneMark_model.68825_t
Valid prediction for GlimmerHMM_glimmerT_40105-T1
Valid prediction for GeneMark_model.68829_t
Valid prediction for GlimmerHMM_glimmerT_40069-T1
Valid prediction for GlimmerHMM_glimmerT_40095-T1
Valid prediction for GeneMark_model.68765_t
Valid prediction for GeneMark_model.68786_t
Valid prediction for snap_scaffold_16-snap.2439-T1
Valid prediction for GlimmerHMM_glimmerT_40083-T1
Couldn't classify 76538, 76792
Couldn't classify 77482, 77634
Sorry, prediction pasa_asmbl_17447.p1 fails validation.
(ACA)	 GA	76538-76792	GT	AGG
(GAG)	 AG	77482-77634	GA	TAG
Valid prediction for snap_scaffold_16-snap.2422-T1
Valid prediction for GeneMark_model.68818_t
Valid prediction for GlimmerHMM_glimmerT_40071-T1
Valid prediction for GeneMark_model.68774_t
Valid prediction for GeneMark_model.68758_t
Valid prediction for snap_scaffold_16-snap.2426-T1
Valid prediction for GeneMark_model.68823_t
Valid prediction for GeneMark_model.68760_t
Valid prediction for GlimmerHMM_glimmerT_40100-T1
Valid prediction for GlimmerHMM_glimmerT_40078-T1
Valid prediction for Augustus_model.g26931.t1
Valid prediction for GeneMark_model.68763_t
Valid prediction for GlimmerHMM_glimmerT_40080-T1
Valid prediction for Augustus_model.g26932.t1
Valid prediction for GeneMark_model.68768_t
Valid prediction for GlimmerHMM_glimmerT_40094-T1
Valid prediction for Augustus_model.g26923.t1
Valid prediction for snap_scaffold_16-snap.2424-T1
Valid prediction for snap_scaffold_16-snap.2400-T1
Valid prediction for CodingQuarry_transcript_20077-T1
Valid prediction for GeneMark_model.68811_t
Valid prediction for snap_scaffold_16-snap.2402-T1
Valid prediction for GlimmerHMM_glimmerT_40106-T1
Valid prediction for snap_scaffold_16-snap.2398-T1
Valid prediction for Augustus_model.g26943.t1
Valid prediction for Augustus_model.g26941.t1
Valid prediction for snap_scaffold_16-snap.2407-T1
Valid prediction for GeneMark_model.68785_t
Valid prediction for Augustus_model.g26944.t1
Valid prediction for GeneMark_model.68789_t
Valid prediction for GeneMark_model.68797_t
Valid prediction for GeneMark_model.68795_t
Valid prediction for GlimmerHMM_glimmerT_40081-T1
Valid prediction for GeneMark_model.68769_t
Valid prediction for GlimmerHMM_glimmerT_40108-T1
Valid prediction for snap_scaffold_16-snap.2440-T1
Valid prediction for GeneMark_model.68791_t
Valid prediction for snap_scaffold_16-snap.2414-T1
Valid prediction for snap_scaffold_16-snap.2421-T1
Valid prediction for GeneMark_model.68800_t
Valid prediction for GlimmerHMM_glimmerT_40079-T1
Valid prediction for GeneMark_model.68807_t
Valid prediction for Augustus_model.g26930.t1
Valid prediction for GeneMark_model.68820_t
Valid prediction for snap_scaffold_16-snap.2431-T1
Valid prediction for GeneMark_model.68793_t
Valid prediction for snap_scaffold_16-snap.2428-T1
Sorry, intron length (7) is less than minimum required (10)
Valid prediction for GlimmerHMM_glimmerT_40085-T1
Valid prediction for snap_scaffold_16-snap.2394-T1
Valid prediction for GlimmerHMM_glimmerT_40110-T1
Valid prediction for GlimmerHMM_glimmerT_40107-T1
Valid prediction for GeneMark_model.68777_t
Valid prediction for GlimmerHMM_glimmerT_40091-T1
Valid prediction for snap_scaffold_16-snap.2434-T1
Valid prediction for GeneMark_model.68762_t
Valid prediction for snap_scaffold_16-snap.2425-T1
Valid prediction for Augustus_model.g26937.t1
Valid prediction for GeneMark_model.68756_t
Valid prediction for snap_scaffold_16-snap.2433-T1
Valid prediction for GlimmerHMM_glimmerT_40104-T1
Valid prediction for GeneMark_model.68798_t
Valid prediction for Augustus_model.g26939.t1
Valid prediction for snap_scaffold_16-snap.2408-T1
Couldn't classify 72555, 72716
Sorry, prediction pasa_asmbl_17445.p1 fails validation.
(ATG)	 CA	69832-69950	GT	TCG
(TGA)	 AG	70120-70222	GT	AGG
(AAG)	 AG	70320-70414	GT	AGG
(GTA)	 AG	70550-70655	GT	AGG
(CTG)	 AG	70824-70906	GT	AAG
(TGA)	 AG	71033-71129	GT	AGG
(TTT)	 AG	71317-71427	GT	AGG
(GTG)	 AG	72555-72716	GG	AGG
-recovered pasa_asmbl_17445.p1, initial, 69832, 69950
-recovered pasa_asmbl_17445.p1, internal, 70120, 70222
-recovered pasa_asmbl_17445.p1, internal, 70320, 70414
-recovered pasa_asmbl_17445.p1, internal, 70550, 70655
-recovered pasa_asmbl_17445.p1, internal, 70824, 70906
-recovered pasa_asmbl_17445.p1, internal, 71033, 71129
-recovered pasa_asmbl_17445.p1, internal, 71317, 71427
Valid prediction for GlimmerHMM_glimmerT_40075-T1
Valid prediction for GeneMark_model.68814_t
Valid prediction for snap_scaffold_16-snap.2395-T1
Valid prediction for snap_scaffold_16-snap.2412-T1
Valid prediction for Augustus_model.g26935.t1
Valid prediction for snap_scaffold_16-snap.2430-T1
Valid prediction for GeneMark_model.68776_t
Valid prediction for Augustus_model.g26940.t1
Valid prediction for GlimmerHMM_glimmerT_40070-T1
Valid prediction for GeneMark_model.68803_t
Valid prediction for snap_scaffold_16-snap.2403-T1
Valid prediction for Augustus_model.g26929.t1
Valid prediction for GeneMark_model.68779_t
Valid prediction for GlimmerHMM_glimmerT_40084-T1
Valid prediction for GlimmerHMM_glimmerT_40089-T1
Valid prediction for Augustus_model.g26924.t1
Valid prediction for GlimmerHMM_glimmerT_40109-T1
Valid prediction for Augustus_model.g26938.t1
Valid prediction for snap_scaffold_16-snap.2392-T1
Valid prediction for snap_scaffold_16-snap.2413-T1
Valid prediction for Augustus_model.g26942.t1
Valid prediction for GeneMark_model.68827_t
Valid prediction for snap_scaffold_16-snap.2405-T1
Valid prediction for GlimmerHMM_glimmerT_40077-T1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for GlimmerHMM_glimmerT_40082-T1
Valid prediction for snap_scaffold_16-snap.2438-T1
Valid prediction for GeneMark_model.68759_t
Valid prediction for GeneMark_model.68804_t
Valid prediction for GeneMark_model.68826_t
Valid prediction for snap_scaffold_16-snap.2391-T1
Valid prediction for GlimmerHMM_glimmerT_40092-T1
Valid prediction for snap_scaffold_16-snap.2417-T1
Valid prediction for GlimmerHMM_glimmerT_40088-T1
Valid prediction for snap_scaffold_16-snap.2418-T1
Valid prediction for GeneMark_model.68809_t
Valid prediction for snap_scaffold_16-snap.2436-T1
Valid prediction for GlimmerHMM_glimmerT_40097-T1
Valid prediction for GeneMark_model.68812_t
Valid prediction for CodingQuarry_transcript_20076-T1
Valid prediction for Augustus_model.g26934.t1
Valid prediction for GeneMark_model.68787_t
Valid prediction for GeneMark_model.68782_t
Valid prediction for GeneMark_model.68821_t
Valid prediction for GeneMark_model.68771_t
Valid prediction for GlimmerHMM_glimmerT_40099-T1
Valid prediction for snap_scaffold_16-snap.2396-T1
Valid prediction for snap_scaffold_16-snap.2399-T1
Valid prediction for GeneMark_model.68824_t
Valid prediction for GeneMark_model.68767_t
Valid prediction for GeneMark_model.68757_t
Valid prediction for Augustus_model.g26933.t1
Valid prediction for GeneMark_model.68819_t
Valid prediction for snap_scaffold_16-snap.2404-T1
Valid prediction for snap_scaffold_16-snap.2401-T1
Valid prediction for GeneMark_model.68796_t
Valid prediction for Augustus_model.g26927.t1
Valid prediction for GlimmerHMM_glimmerT_40076-T1
Valid prediction for GeneMark_model.68801_t
Valid prediction for GeneMark_model.68808_t
Valid prediction for GeneMark_model.68806_t
Valid prediction for GeneMark_model.68817_t
Valid prediction for Augustus_model.g26926.t1
Valid prediction for Augustus_model.g26928.t1
Valid prediction for GeneMark_model.68792_t
Valid prediction for snap_scaffold_16-snap.2441-T1
Valid prediction for GeneMark_model.68828_t
Valid prediction for GlimmerHMM_glimmerT_40096-T1
Valid prediction for GeneMark_model.68780_t
Valid prediction for GlimmerHMM_glimmerT_40090-T1
Valid prediction for snap_scaffold_16-snap.2432-T1
Valid prediction for GeneMark_model.68788_t
Valid prediction for snap_scaffold_16-snap.2429-T1
Valid prediction for GeneMark_model.68815_t
Valid prediction for GlimmerHMM_glimmerT_40072-T1
Valid prediction for GeneMark_model.68766_t
Valid prediction for GeneMark_model.68813_t
Valid prediction for snap_scaffold_16-snap.2416-T1
Valid prediction for snap_scaffold_16-snap.2420-T1
Valid prediction for GlimmerHMM_glimmerT_40102-T1
Valid prediction for GeneMark_model.68773_t
Valid prediction for GeneMark_model.68790_t
Valid prediction for GeneMark_model.68770_t
Valid prediction for GeneMark_model.68781_t
Valid prediction for snap_scaffold_16-snap.2393-T1
Valid prediction for GlimmerHMM_glimmerT_40074-T1
Valid prediction for snap_scaffold_16-snap.2410-T1
Valid prediction for GeneMark_model.68784_t
Valid prediction for snap_scaffold_16-snap.2427-T1
Valid prediction for GlimmerHMM_glimmerT_40086-T1
Valid prediction for GlimmerHMM_glimmerT_40087-T1
Valid prediction for Augustus_model.g26925.t1
Valid prediction for GlimmerHMM_glimmerT_40103-T1
Valid prediction for GlimmerHMM_glimmerT_40098-T1
Valid prediction for snap_scaffold_16-snap.2415-T1
Valid prediction for GeneMark_model.68822_t
Valid prediction for GeneMark_model.68764_t
Valid prediction for snap_scaffold_16-snap.2419-T1
Valid prediction for snap_scaffold_16-snap.2409-T1
Valid prediction for GlimmerHMM_glimmerT_40101-T1
Valid prediction for Augustus_model.g26936.t1
Valid prediction for GeneMark_model.68761_t
Valid prediction for snap_scaffold_16-snap.2406-T1
Valid prediction for GlimmerHMM_glimmerT_40073-T1
Valid prediction for GlimmerHMM_glimmerT_40093-T1
Valid prediction for snap_scaffold_16-snap.2437-T1
Valid prediction for snap_scaffold_16-snap.2411-T1
Valid prediction for snap_scaffold_16-snap.2435-T1
Valid prediction for GeneMark_model.68802_t
Valid prediction for GeneMark_model.68810_t
Valid prediction for snap_scaffold_16-snap.2397-T1
Valid prediction for snap_scaffold_16-snap.2423-T1
Valid prediction for pasa_asmbl_16578.p1
Valid prediction for GeneMark_model.68778_t
Valid prediction for GeneMark_model.68799_t
Valid prediction for GeneMark_model.68794_t

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 10757, rend_intergenic: 9107  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 13608, rend_intergenic: 11005  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 32048, rend_intergenic: 30853  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 36208, rend_intergenic: 32942  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 37595, rend_intergenic: 36809  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 46422, rend_intergenic: 37720  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 51402, rend_intergenic: 47692  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 78210, rend_intergenic: 71284  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 88645, rend_intergenic: 86216  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 102115, rend_intergenic: 97966  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 144533, rend_intergenic: 106734  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 157092, rend_intergenic: 145075  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 158639, rend_intergenic: 157098  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 173778, rend_intergenic: 159053  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 177459, rend_intergenic: 174841  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 181015, rend_intergenic: 177897  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 186433, rend_intergenic: 181474  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 192795, rend_intergenic: 188391  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 200578, rend_intergenic: 196239  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 205006, rend_intergenic: 201655  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 229782, rend_intergenic: 208921  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 237044, rend_intergenic: 229870  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: GlimmerHMM lend_intergenic: 147499, rend_intergenic: 147496  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 241864
-exon list size: 1033


building trellis

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47.7    
47.8    
47.9    
48.0    
48.1    
48.2    
48.3    
48.4    
48.5    
48.6    
48.7    
48.8    
48.9    
49.0    
49.1    
49.2    
49.3    
49.4    
49.5    
49.6    
49.7    
49.8    
49.9    
50.0    
50.0    
50.1    
50.2    
50.3    
50.4    
50.5    
50.6    
50.7    
50.8    
50.9    
51.0    
51.1    
51.2    
51.3    
51.4    
51.5    
51.6    
51.7    
51.8    
51.9    
52.0    
52.1    
52.2    
52.3    
52.4    
52.5    
52.6    
52.7    
52.8    
52.9    
52.9    
53.0    
53.1    
53.2    
53.3    
53.4    
53.5    
53.6    
53.7    
53.8    
53.9    
54.0    
54.1    
54.2    
54.3    
54.4    
54.5    
54.6    
54.7    
54.8    
54.9    
55.0    
55.1    
55.2    
55.3    
55.4    
55.5    
55.6    
55.7    
55.7    
55.8    
55.9    
56.0    
56.1    
56.2    
56.3    
56.4    
56.5    
56.6    
56.7    
56.8    
56.9    
57.0    
57.1    
57.2    
57.3    
57.4    
57.5    
57.6    
57.7    
57.8    
57.9    
58.0    
58.1    
58.2    
58.3    
58.4    
58.5    
58.6    
58.6    
58.7    
58.8    
58.9    
59.0    
59.1    
59.2    
59.3    
59.4    
59.5    
59.6    
59.7    
59.8    
59.9    
60.0    
60.1    
60.2    
60.3    
60.4    
60.5    
60.6    
60.7    
60.8    
60.9    
61.0    
61.1    
61.2    
61.3    
61.4    
61.4    
61.5    
61.6    
61.7    
61.8    
61.9    
62.0    
62.1    
62.2    
62.3    
62.4    
62.5    
62.6    
62.7    
62.8    
62.9    
63.0    
63.1    
63.2    
63.3    
63.4    
63.5    
63.6    
63.7    
63.8    
63.9    
64.0    
64.1    
64.2    
64.3    
64.3    
64.4    
64.5    
64.6    
64.7    
64.8    
64.9    
65.0    
65.1    
65.2    
65.3    
65.4    
65.5    
65.6    
65.7    
65.8    
65.9    
66.0    
66.1    
66.2    
66.3    
66.4    
66.5    
66.6    
66.7    
66.8    
66.9    
67.0    
67.1    
67.1    
67.2    
67.3    
67.4    
67.5    
67.6    
67.7    
67.8    
67.9    
68.0    
68.1    
68.2    
68.3    
68.4    
68.5    
68.6    
68.7    
68.8    
68.9    
69.0    
69.1    
69.2    
69.3    
69.4    
69.5    
69.6    
69.7    
69.8    
69.9    
70.0    
70.0    
70.1    
70.2    
70.3    
70.4    
70.5    
70.6    
70.7    
70.8    
70.9    
71.0    
71.1    
71.2    
71.3    
71.4    
71.5    
71.6    
71.7    
71.8    
71.9    
72.0    
72.1    
72.2    
72.3    
72.4    
72.5    
72.6    
72.7    
72.8    
72.9    
72.9    
73.0    
73.1    
73.2    
73.3    
73.4    
73.5    
73.6    
73.7    
73.8    
73.9    
74.0    
74.1    
74.2    
74.3    
74.4    
74.5    
74.6    
74.7    
74.8    
74.9    
75.0    
75.1    
75.2    
75.3    
75.4    
75.5    
75.6    
75.7    
75.7    
75.8    
75.9    
76.0    
76.1    
76.2    
76.3    
76.4    
76.5    
76.6    
76.7    
76.8    
76.9    
77.0    
77.1    
77.2    
77.3    
77.4    
77.5    
77.6    
77.7    
77.8    
77.9    
78.0    
78.1    
78.2    
78.3    
78.4    
78.5    
78.6    
78.6    
78.7    
78.8    
78.9    
79.0    
79.1    
79.2    
79.3    
79.4    
79.5    
79.6    
79.7    
79.8    
79.9    
80.0    
80.1    
80.2    
80.3    
80.4    
80.5    
80.6    
80.7    
80.8    
80.9    
81.0    
81.1    
81.2    
81.3    
81.4    
81.4    
81.5    
81.6    
81.7    
81.8    
81.9    
82.0    
82.1    
82.2    
82.3    
82.4    
82.5    
82.6    
82.7    
82.8    
82.9    
83.0    
83.1    
83.2    
83.3    
83.4    
83.5    
83.6    
83.7    
83.8    
83.9    
84.0    
84.1    
84.2    
84.3    
84.3    
84.4    
84.5    
84.6    
84.7    
84.8    
84.9    
85.0    
85.1    
85.2    
85.3    
85.4    
85.5    
85.6    
85.7    
85.8    
85.9    
86.0    
86.1    
86.2    
86.3    
86.4    
86.5    
86.6    
86.7    
86.8    
86.9    
87.0    
87.1    
87.1    
87.2    
87.3    
87.4    
87.5    
87.6    
87.7    
87.8    
87.9    
88.0    
88.1    
88.2    
88.3    
88.4    
88.5    
88.6    
88.7    
88.8    
88.9    
89.0    
89.1    
89.2    
89.3    
89.4    
89.5    
89.6    
89.7    
89.8    
89.9    
90.0    
90.0    
90.1    
90.2    
90.3    
90.4    
90.5    
90.6    
90.7    
90.8    
90.9    
91.0    
91.1    
91.2    
91.3    
91.4    
91.5    
91.6    
91.7    
91.8    
91.9    
92.0    
92.1    
92.2    
92.3    
92.4    
92.5    
92.6    
92.7    
92.8    
92.9    
92.9    
93.0    
93.1    
93.2    
93.3    
93.4    
93.5    
93.6    
93.7    
93.8    
93.9    
94.0    
94.1    
94.2    
94.3    
94.4    
94.5    
94.6    
94.7    
94.8    
94.9    
95.0    
95.1    
95.2    
95.3    
95.4    
95.5    
95.6    
95.7    
95.7    
95.8    
95.9    
96.0    
96.1    
96.2    
96.3    
96.4    
96.5    
96.6    
96.7    
96.8    
96.9    
97.0    
97.1    
97.2    
97.3    
97.4    
97.5    
97.6    
97.7    
97.8    
97.9    
98.0    
98.1    
98.2    
98.3    
98.4    
98.5    
98.6    
98.6    
98.7    
98.8    
98.9    
99.0    
99.1    
99.2    
99.3    
99.4    
99.5    
99.6    
99.7    
99.8    
99.9    
-found 47 predictions from path traversal
Error with prediction: snap lend_intergenic: 10757, rend_intergenic: 9107  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 13608, rend_intergenic: 11005  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 32048, rend_intergenic: 30853  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 36208, rend_intergenic: 32942  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 37595, rend_intergenic: 36809  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 46422, rend_intergenic: 37720  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 51402, rend_intergenic: 47692  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 78210, rend_intergenic: 71284  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 88645, rend_intergenic: 86216  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 102115, rend_intergenic: 97966  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 144533, rend_intergenic: 106734  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 157092, rend_intergenic: 145075  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 158639, rend_intergenic: 157098  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 173778, rend_intergenic: 159053  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 177459, rend_intergenic: 174841  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 181015, rend_intergenic: 177897  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 186433, rend_intergenic: 181474  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 192795, rend_intergenic: 188391  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 200578, rend_intergenic: 196239  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 205006, rend_intergenic: 201655  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 229782, rend_intergenic: 208921  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 237044, rend_intergenic: 229870  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: GlimmerHMM lend_intergenic: 147499, rend_intergenic: 147496  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 21 predictions persist after filtering for low support