-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_16/scaffold_16_11777193-11978329

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for GlimmerHMM_glimmerT_39985-T1
Couldn't classify 140, 994
Sorry, prediction pasa_asmbl_17408.p1 fails validation.
(CAG)	 TG	140-994	CC	GAC
Valid prediction for GeneMark_model.68587_t
Valid prediction for snap_scaffold_16-snap.2265-T1
Valid prediction for GeneMark_model.68571_t
Valid prediction for CodingQuarry_transcript_20063-T1
Valid prediction for GeneMark_model.68598_t
Valid prediction for snap_scaffold_16-snap.2260-T1
Valid prediction for GeneMark_model.68554_t
Valid prediction for HiQ_model.g26880.t1
Valid prediction for Augustus_model.g26876.t1
Valid prediction for snap_scaffold_16-snap.2272-T1
Valid prediction for Augustus_model.g26864.t1
Couldn't classify 176847, 177492
Sorry, prediction pasa_asmbl_17420.p1 fails validation.
(ATG)	 CC	176268-176413	GT	AGG
(ATG)	 AG	176847-177492	TG	ACT
-recovered pasa_asmbl_17420.p1, initial, 176268, 176413
Valid prediction for snap_scaffold_16-snap.2247-T1
Valid prediction for GlimmerHMM_glimmerT_39986-T1
Valid prediction for snap_scaffold_16-snap.2234-T1
Valid prediction for Augustus_model.g26863.t1
Valid prediction for Augustus_model.g26885.t1
Valid prediction for GeneMark_model.68600_t
Valid prediction for Augustus_model.g26873.t1
Valid prediction for Augustus_model.g26874.t1
Valid prediction for GeneMark_model.68593_t
Valid prediction for GlimmerHMM_glimmerT_39987-T1
Valid prediction for snap_scaffold_16-snap.2257-T1
Valid prediction for GeneMark_model.68584_t
Valid prediction for Augustus_model.g26882.t1
Valid prediction for Augustus_model.g26877.t1
Valid prediction for snap_scaffold_16-snap.2253-T1
Valid prediction for GlimmerHMM_glimmerT_39988-T1
Valid prediction for GlimmerHMM_glimmerT_39982-T1
Valid prediction for GlimmerHMM_glimmerT_39975-T1
Valid prediction for GlimmerHMM_glimmerT_39984-T1
Valid prediction for GlimmerHMM_glimmerT_39999-T1
Valid prediction for snap_scaffold_16-snap.2244-T1
Couldn't classify 139117, 139199
Couldn't classify 139948, 140094
Sorry, prediction pasa_asmbl_17415.p1 fails validation.
(GGG)	 AT	139117-139199	GT	AGG
(TGG)	 AG	139376-139569	GT	AGG
(ATG)	 AG	139687-139748	GT	CGG
(TAC)	 AG	139948-140094	TA	CCT
add_exon() Sorry, pasa_asmbl_17415.p1 139687-139748-initial-1 is invalid.
-recovered pasa_asmbl_17415.p1, initial, 139687, 139748
-recovered pasa_asmbl_17415.p1, internal, 139376, 139569
-recovered pasa_asmbl_17415.p1, internal, 139687, 139748
Valid prediction for GlimmerHMM_glimmerT_39993-T1
Valid prediction for GeneMark_model.68579_t
Valid prediction for GeneMark_model.68573_t
Valid prediction for GlimmerHMM_glimmerT_39973-T1
Valid prediction for GeneMark_model.68541_t
Valid prediction for GeneMark_model.68539_t
Couldn't classify 40396, 40471
Sorry, prediction pasa_asmbl_17412.p1 fails validation.
(TTT)	 TG	40396-40471	GT	CGG
(ATT)	 AG	40613-40674	GT	CAG
(TAT)	 AG	41893-41949	GT	AGG
(TTC)	 AG	42809-42916	GC	AGG
(GCT)	 AG	45406-45494	GT	GCG
(GGG)	 AG	45598-45702	GT	AGG
(GCC)	 AG	45990-46017	TG	AAT
-recovered pasa_asmbl_17412.p1, terminal, 45990, 46017
-recovered pasa_asmbl_17412.p1, internal, 40613, 40674
-recovered pasa_asmbl_17412.p1, internal, 41893, 41949
-recovered pasa_asmbl_17412.p1, internal, 42809, 42916
-recovered pasa_asmbl_17412.p1, internal, 45406, 45494
-recovered pasa_asmbl_17412.p1, internal, 45598, 45702
Valid prediction for snap_scaffold_16-snap.2278-T1
Valid prediction for GeneMark_model.68543_t
Couldn't classify 192817, 192962
Couldn't classify 194939, 195092
Sorry, prediction pasa_asmbl_17608.p1 fails validation.
(GAG)	 AC	192817-192962	GT	AGG
(GCT)	 AG	194939-195092	AC	GTA
Valid prediction for snap_scaffold_16-snap.2269-T1
Valid prediction for snap_scaffold_16-snap.2268-T1
Valid prediction for snap_scaffold_16-snap.2275-T1
Valid prediction for GeneMark_model.68545_t
Valid prediction for GlimmerHMM_glimmerT_39995-T1
Valid prediction for GeneMark_model.68595_t
Valid prediction for GeneMark_model.68590_t
Valid prediction for GeneMark_model.68549_t
Couldn't classify 17376, 17447
Couldn't classify 23752, 23816
Sorry, prediction pasa_asmbl_17411.p1 fails validation.
(AGC)	 AC	17376-17447	GT	AGG
(GGT)	 AG	17911-18038	GT	AAG
(TGC)	 AG	18348-18459	GT	AGG
(AAC)	 AG	18603-18771	GT	AGG
(GTG)	 AG	19044-19171	GT	GGG
(GAT)	 AG	19324-19401	GT	AGG
(GTG)	 AG	19627-19715	GT	GGG
(GCA)	 AG	19827-19871	GT	AGG
(TCA)	 AG	20332-20404	GT	ACG
(CCC)	 AG	20593-20698	GT	AGG
(ACG)	 AG	20831-20913	GT	CTG
(AGA)	 AG	21034-21083	GT	AGG
(CAA)	 AG	21248-21317	GT	CGG
(GAT)	 AG	21444-21528	GT	GGG
(GCC)	 AG	21819-21958	GT	AGG
(AAC)	 AG	23357-23495	GT	CGG
(GTT)	 AG	23752-23816	GT	ACG
-recovered pasa_asmbl_17411.p1, internal, 17911, 18038
-recovered pasa_asmbl_17411.p1, internal, 18348, 18459
-recovered pasa_asmbl_17411.p1, internal, 18603, 18771
-recovered pasa_asmbl_17411.p1, internal, 19044, 19171
-recovered pasa_asmbl_17411.p1, internal, 19324, 19401
-recovered pasa_asmbl_17411.p1, internal, 19627, 19715
-recovered pasa_asmbl_17411.p1, internal, 19827, 19871
-recovered pasa_asmbl_17411.p1, internal, 20332, 20404
-recovered pasa_asmbl_17411.p1, internal, 20593, 20698
-recovered pasa_asmbl_17411.p1, internal, 20831, 20913
-recovered pasa_asmbl_17411.p1, internal, 21034, 21083
-recovered pasa_asmbl_17411.p1, internal, 21248, 21317
-recovered pasa_asmbl_17411.p1, internal, 21444, 21528
-recovered pasa_asmbl_17411.p1, internal, 21819, 21958
-recovered pasa_asmbl_17411.p1, internal, 23357, 23495
-recovered pasa_asmbl_17411.p1, internal, 23752, 23816
Couldn't classify 159413, 159601
Sorry, prediction pasa_asmbl_17541.p1 fails validation.
(CTG)	 GA	159413-159601	GT	GCG
(GTT)	 AG	159896-160033	GT	CAG
(GAC)	 AG	160325-160476	GT	CCG
(GTG)	 AG	160823-160985	GT	AGG
(CTG)	 AG	161127-161235	GT	AGG
(GTA)	 AG	161659-161781	GT	CGG
(ACA)	 AG	161945-162059	GT	GCG
(TGT)	 AG	162252-162315	GT	AGG
(GTC)	 AG	162690-162893	GT	AGG
(GCT)	 AG	163019-163113	GT	AGG
(GTT)	 AG	163237-163408	GT	AGG
(GAC)	 AG	163867-163959	GC	GAG
-recovered pasa_asmbl_17541.p1, terminal, 163867, 163959
-recovered pasa_asmbl_17541.p1, internal, 159896, 160033
-recovered pasa_asmbl_17541.p1, internal, 160325, 160476
-recovered pasa_asmbl_17541.p1, internal, 160823, 160985
-recovered pasa_asmbl_17541.p1, internal, 161127, 161235
-recovered pasa_asmbl_17541.p1, internal, 161659, 161781
-recovered pasa_asmbl_17541.p1, internal, 161945, 162059
-recovered pasa_asmbl_17541.p1, internal, 162252, 162315
-recovered pasa_asmbl_17541.p1, internal, 162690, 162893
-recovered pasa_asmbl_17541.p1, internal, 163019, 163113
-recovered pasa_asmbl_17541.p1, internal, 163237, 163408
-recovered pasa_asmbl_17541.p1, internal, 163867, 163959
Valid prediction for GeneMark_model.68563_t
Valid prediction for Augustus_model.g26886.t1
Valid prediction for snap_scaffold_16-snap.2250-T1
Valid prediction for GeneMark_model.68547_t
Valid prediction for GeneMark_model.68560_t
Valid prediction for GeneMark_model.68558_t
Valid prediction for snap_scaffold_16-snap.2267-T1
Valid prediction for GeneMark_model.68580_t
Valid prediction for GeneMark_model.68565_t
Valid prediction for GeneMark_model.68550_t
Valid prediction for Augustus_model.g26871.t1
Valid prediction for GlimmerHMM_glimmerT_39978-T1
Valid prediction for GeneMark_model.68577_t
Valid prediction for snap_scaffold_16-snap.2235-T1
Valid prediction for GlimmerHMM_glimmerT_39994-T1
Valid prediction for GeneMark_model.68537_t
Valid prediction for GeneMark_model.68567_t
Valid prediction for GeneMark_model.68602_t
Valid prediction for GeneMark_model.68594_t
Valid prediction for Augustus_model.g26875.t1
Valid prediction for GeneMark_model.68582_t
Valid prediction for Augustus_model.g26868.t1
Valid prediction for snap_scaffold_16-snap.2258-T1
Valid prediction for Augustus_model.g26881.t1
Valid prediction for GlimmerHMM_glimmerT_39977-T1
Valid prediction for GeneMark_model.68569_t
Valid prediction for GeneMark_model.68552_t
Valid prediction for GlimmerHMM_glimmerT_40001-T1
Valid prediction for GeneMark_model.68538_t
Valid prediction for HiQ_model.g26866.t1
Valid prediction for GeneMark_model.68592_t
Valid prediction for GeneMark_model.68556_t
Valid prediction for snap_scaffold_16-snap.2259-T1
Couldn't classify 50483, 50932
Sorry, prediction pasa_asmbl_17414.p1 fails validation.
(ATG)	 AC	50483-50932	CT	GAC
Valid prediction for snap_scaffold_16-snap.2254-T1
Valid prediction for GlimmerHMM_glimmerT_39974-T1
Valid prediction for GlimmerHMM_glimmerT_39989-T1
Couldn't classify 177882, 178048
Sorry, prediction pasa_asmbl_17424.p1 fails validation.
(ATA)	 GG	177882-178048	GT	AGG
(TTC)	 AG	179071-179347	AG	AGA
-recovered pasa_asmbl_17424.p1, terminal, 179071, 179347
Valid prediction for GeneMark_model.68575_t
Valid prediction for Augustus_model.g26865.t1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for GeneMark_model.68546_t
Valid prediction for snap_scaffold_16-snap.2262-T1
Valid prediction for GeneMark_model.68601_t
Valid prediction for Augustus_model.g26883.t1
Valid prediction for Augustus_model.g26870.t1
Valid prediction for GlimmerHMM_glimmerT_39976-T1
Valid prediction for snap_scaffold_16-snap.2256-T1
Valid prediction for GeneMark_model.68578_t
Valid prediction for snap_scaffold_16-snap.2237-T1
Valid prediction for GeneMark_model.68562_t
Valid prediction for GlimmerHMM_glimmerT_40000-T1
Valid prediction for GeneMark_model.68566_t
Valid prediction for GlimmerHMM_glimmerT_39979-T1
Valid prediction for GeneMark_model.68599_t
Valid prediction for snap_scaffold_16-snap.2270-T1
Valid prediction for snap_scaffold_16-snap.2245-T1
Valid prediction for GeneMark_model.68559_t
Valid prediction for GeneMark_model.68548_t
Valid prediction for GlimmerHMM_glimmerT_39992-T1
Valid prediction for snap_scaffold_16-snap.2239-T1
Valid prediction for GeneMark_model.68544_t
Valid prediction for snap_scaffold_16-snap.2236-T1
Valid prediction for snap_scaffold_16-snap.2261-T1
Valid prediction for GeneMark_model.68555_t
Valid prediction for snap_scaffold_16-snap.2242-T1
Valid prediction for CodingQuarry_transcript_20065-T1
Valid prediction for GlimmerHMM_glimmerT_39997-T1
Valid prediction for snap_scaffold_16-snap.2276-T1
Valid prediction for snap_scaffold_16-snap.2264-T1
Valid prediction for GeneMark_model.68551_t
Valid prediction for GlimmerHMM_glimmerT_39996-T1
Valid prediction for snap_scaffold_16-snap.2240-T1
Valid prediction for GeneMark_model.68581_t
Valid prediction for pasa_asmbl_16553.p1
Valid prediction for GeneMark_model.68596_t
Valid prediction for snap_scaffold_16-snap.2266-T1
Valid prediction for snap_scaffold_16-snap.2277-T1
Valid prediction for GeneMark_model.68574_t
Valid prediction for GeneMark_model.68553_t
Valid prediction for GeneMark_model.68570_t
Valid prediction for GlimmerHMM_glimmerT_39991-T1
Valid prediction for GeneMark_model.68585_t
Valid prediction for GeneMark_model.68588_t
Valid prediction for Augustus_model.g26884.t1
Valid prediction for snap_scaffold_16-snap.2273-T1
Valid prediction for GlimmerHMM_glimmerT_39998-T1
Valid prediction for snap_scaffold_16-snap.2241-T1
Valid prediction for Augustus_model.g26878.t1
Valid prediction for GlimmerHMM_glimmerT_39980-T1
Valid prediction for GeneMark_model.68586_t
Valid prediction for GlimmerHMM_glimmerT_39983-T1
Valid prediction for snap_scaffold_16-snap.2249-T1
Valid prediction for GlimmerHMM_glimmerT_39981-T1
Valid prediction for GeneMark_model.68568_t
Valid prediction for snap_scaffold_16-snap.2243-T1
Valid prediction for snap_scaffold_16-snap.2246-T1
Valid prediction for CodingQuarry_transcript_20066-T1
Valid prediction for GeneMark_model.68583_t
Valid prediction for Augustus_model.g26867.t1
Valid prediction for snap_scaffold_16-snap.2255-T1
Valid prediction for Augustus_model.g26872.t1
Valid prediction for snap_scaffold_16-snap.2274-T1
Valid prediction for GeneMark_model.68564_t
Valid prediction for snap_scaffold_16-snap.2271-T1
Valid prediction for snap_scaffold_16-snap.2238-T1
Valid prediction for snap_scaffold_16-snap.2251-T1
Valid prediction for GeneMark_model.68540_t
Valid prediction for Augustus_model.g26869.t1
Valid prediction for snap_scaffold_16-snap.2263-T1
Valid prediction for snap_scaffold_16-snap.2248-T1
Valid prediction for HiQ_model.g26879.t1
Valid prediction for snap_scaffold_16-snap.2252-T1
Sorry, intron length (3) is less than minimum required (10)
Valid prediction for GeneMark_model.68561_t
Valid prediction for GeneMark_model.68576_t
Valid prediction for GeneMark_model.68589_t
Valid prediction for GeneMark_model.68542_t
Valid prediction for GeneMark_model.68597_t
Valid prediction for CodingQuarry_transcript_20064-T1
Valid prediction for GeneMark_model.68591_t
Valid prediction for GlimmerHMM_glimmerT_39990-T1
Valid prediction for GeneMark_model.68572_t

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 52711, rend_intergenic: 13455  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 56596, rend_intergenic: 54693  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 74604, rend_intergenic: 71475  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 96984, rend_intergenic: 80500  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 108713, rend_intergenic: 97310  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 112877, rend_intergenic: 109928  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 131668, rend_intergenic: 117747  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 140620, rend_intergenic: 133326  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 163959, rend_intergenic: 158932  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 179347, rend_intergenic: 176865  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 184673, rend_intergenic: 180191  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 199030, rend_intergenic: 198478  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 201137
-exon list size: 938


building trellis

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39.0    
39.1    
39.3    
39.4    
39.5    
39.6    
39.7    
39.8    
39.9    
40.0    
40.1    
40.2    
40.3    
40.4    
40.5    
40.6    
40.7    
40.9    
41.0    
41.1    
41.2    
41.3    
41.4    
41.5    
41.6    
41.7    
41.8    
41.9    
42.0    
42.1    
42.2    
42.3    
42.4    
42.6    
42.7    
42.8    
42.9    
43.0    
43.1    
43.2    
43.3    
43.4    
43.5    
43.6    
43.7    
43.8    
43.9    
44.0    
44.1    
44.3    
44.4    
44.5    
44.6    
44.7    
44.8    
44.9    
45.0    
45.1    
45.2    
45.3    
45.4    
45.5    
45.6    
45.7    
45.9    
46.0    
46.1    
46.2    
46.3    
46.4    
46.5    
46.6    
46.7    
46.8    
46.9    
47.0    
47.1    
47.2    
47.3    
47.4    
47.6    
47.7    
47.8    
47.9    
48.0    
48.1    
48.2    
48.3    
48.4    
48.5    
48.6    
48.7    
48.8    
48.9    
49.0    
49.1    
49.3    
49.4    
49.5    
49.6    
49.7    
49.8    
49.9    
50.0    
50.1    
50.2    
50.3    
50.4    
50.5    
50.6    
50.7    
50.9    
51.0    
51.1    
51.2    
51.3    
51.4    
51.5    
51.6    
51.7    
51.8    
51.9    
52.0    
52.1    
52.2    
52.3    
52.4    
52.6    
52.7    
52.8    
52.9    
53.0    
53.1    
53.2    
53.3    
53.4    
53.5    
53.6    
53.7    
53.8    
53.9    
54.0    
54.1    
54.3    
54.4    
54.5    
54.6    
54.7    
54.8    
54.9    
55.0    
55.1    
55.2    
55.3    
55.4    
55.5    
55.6    
55.7    
55.9    
56.0    
56.1    
56.2    
56.3    
56.4    
56.5    
56.6    
56.7    
56.8    
56.9    
57.0    
57.1    
57.2    
57.3    
57.4    
57.6    
57.7    
57.8    
57.9    
58.0    
58.1    
58.2    
58.3    
58.4    
58.5    
58.6    
58.7    
58.8    
58.9    
59.0    
59.1    
59.3    
59.4    
59.5    
59.6    
59.7    
59.8    
59.9    
60.0    
60.1    
60.2    
60.3    
60.4    
60.5    
60.6    
60.7    
60.9    
61.0    
61.1    
61.2    
61.3    
61.4    
61.5    
61.6    
61.7    
61.8    
61.9    
62.0    
62.1    
62.2    
62.3    
62.4    
62.6    
62.7    
62.8    
62.9    
63.0    
63.1    
63.2    
63.3    
63.4    
63.5    
63.6    
63.7    
63.8    
63.9    
64.0    
64.1    
64.3    
64.4    
64.5    
64.6    
64.7    
64.8    
64.9    
65.0    
65.1    
65.2    
65.3    
65.4    
65.5    
65.6    
65.7    
65.9    
66.0    
66.1    
66.2    
66.3    
66.4    
66.5    
66.6    
66.7    
66.8    
66.9    
67.0    
67.1    
67.2    
67.3    
67.4    
67.6    
67.7    
67.8    
67.9    
68.0    
68.1    
68.2    
68.3    
68.4    
68.5    
68.6    
68.7    
68.8    
68.9    
69.0    
69.1    
69.3    
69.4    
69.5    
69.6    
69.7    
69.8    
69.9    
70.0    
70.1    
70.2    
70.3    
70.4    
70.5    
70.6    
70.7    
70.9    
71.0    
71.1    
71.2    
71.3    
71.4    
71.5    
71.6    
71.7    
71.8    
71.9    
72.0    
72.1    
72.2    
72.3    
72.4    
72.6    
72.7    
72.8    
72.9    
73.0    
73.1    
73.2    
73.3    
73.4    
73.5    
73.6    
73.7    
73.8    
73.9    
74.0    
74.1    
74.3    
74.4    
74.5    
74.6    
74.7    
74.8    
74.9    
75.0    
75.1    
75.2    
75.3    
75.4    
75.5    
75.6    
75.7    
75.9    
76.0    
76.1    
76.2    
76.3    
76.4    
76.5    
76.6    
76.7    
76.8    
76.9    
77.0    
77.1    
77.2    
77.3    
77.4    
77.6    
77.7    
77.8    
77.9    
78.0    
78.1    
78.2    
78.3    
78.4    
78.5    
78.6    
78.7    
78.8    
78.9    
79.0    
79.1    
79.3    
79.4    
79.5    
79.6    
79.7    
79.8    
79.9    
80.0    
80.1    
80.2    
80.3    
80.4    
80.5    
80.6    
80.7    
80.9    
81.0    
81.1    
81.2    
81.3    
81.4    
81.5    
81.6    
81.7    
81.8    
81.9    
82.0    
82.1    
82.2    
82.3    
82.4    
82.6    
82.7    
82.8    
82.9    
83.0    
83.1    
83.2    
83.3    
83.4    
83.5    
83.6    
83.7    
83.8    
83.9    
84.0    
84.1    
84.3    
84.4    
84.5    
84.6    
84.7    
84.8    
84.9    
85.0    
85.1    
85.2    
85.3    
85.4    
85.5    
85.6    
85.7    
85.9    
86.0    
86.1    
86.2    
86.3    
86.4    
86.5    
86.6    
86.7    
86.8    
86.9    
87.0    
87.1    
87.2    
87.3    
87.4    
87.6    
87.7    
87.8    
87.9    
88.0    
88.1    
88.2    
88.3    
88.4    
88.5    
88.6    
88.7    
88.8    
88.9    
89.0    
89.1    
89.3    
89.4    
89.5    
89.6    
89.7    
89.8    
89.9    
90.0    
90.1    
90.2    
90.3    
90.4    
90.5    
90.6    
90.7    
90.9    
91.0    
91.1    
91.2    
91.3    
91.4    
91.5    
91.6    
91.7    
91.8    
91.9    
92.0    
92.1    
92.2    
92.3    
92.4    
92.6    
92.7    
92.8    
92.9    
93.0    
93.1    
93.2    
93.3    
93.4    
93.5    
93.6    
93.7    
93.8    
93.9    
94.0    
94.1    
94.3    
94.4    
94.5    
94.6    
94.7    
94.8    
94.9    
95.0    
95.1    
95.2    
95.3    
95.4    
95.5    
95.6    
95.7    
95.9    
96.0    
96.1    
96.2    
96.3    
96.4    
96.5    
96.6    
96.7    
96.8    
96.9    
97.0    
97.1    
97.2    
97.3    
97.4    
97.6    
97.7    
97.8    
97.9    
98.0    
98.1    
98.2    
98.3    
98.4    
98.5    
98.6    
98.7    
98.8    
98.9    
99.0    
99.1    
99.3    
99.4    
99.5    
99.6    
99.7    
99.8    
99.9    
-found 37 predictions from path traversal
Error with prediction: snap lend_intergenic: 52711, rend_intergenic: 13455  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 56596, rend_intergenic: 54693  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 74604, rend_intergenic: 71475  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 96984, rend_intergenic: 80500  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 108713, rend_intergenic: 97310  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 112877, rend_intergenic: 109928  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 131668, rend_intergenic: 117747  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 140620, rend_intergenic: 133326  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 163959, rend_intergenic: 158932  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 179347, rend_intergenic: 176865  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 184673, rend_intergenic: 180191  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 199030, rend_intergenic: 198478  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 27 predictions persist after filtering for low support