-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_16/scaffold_16_11614771-11779108

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for GlimmerHMM_glimmerT_39951-T1
Valid prediction for GlimmerHMM_glimmerT_39955-T1
Valid prediction for GlimmerHMM_glimmerT_39969-T1
Valid prediction for GlimmerHMM_glimmerT_39972-T1
Valid prediction for Augustus_model.g26859.t1
Valid prediction for CodingQuarry_transcript_20059-T1
Valid prediction for GlimmerHMM_glimmerT_39967-T1
Valid prediction for snap_scaffold_16-snap.2210-T1
Valid prediction for snap_scaffold_16-snap.2191-T1
Valid prediction for GeneMark_model.68532_t
Valid prediction for snap_scaffold_16-snap.2199-T1
Valid prediction for snap_scaffold_16-snap.2219-T1
Valid prediction for GeneMark_model.68514_t
Valid prediction for GeneMark_model.68512_t
Valid prediction for snap_scaffold_16-snap.2229-T1
Valid prediction for snap_scaffold_16-snap.2228-T1
Valid prediction for Augustus_model.g26862.t1
Valid prediction for pasa_asmbl_17399.p1
Couldn't classify 57019, 57067
Sorry, prediction pasa_asmbl_17587.p1 fails validation.
(TCC)	 CC	57019-57067	GT	AGG
(ATG)	 AG	58373-58672	GT	AGG
(TCC)	 AG	60632-60778	GT	TGG
(GTA)	 AG	60943-61074	GT	GAG
(ATA)	 AG	63043-63149	GT	AGG
(CCA)	 AG	63519-63654	GT	AGG
(AGA)	 AG	64421-64525	GT	AGG
(AGG)	 AG	64847-64960	GT	AGG
(GAC)	 AG	65367-65455	GT	GGG
(GTG)	 AG	66230-66332	GT	GGG
(GTT)	 AG	66684-66775	GT	AGG
(TGT)	 AG	66898-67020	GT	ACG
(GCC)	 AG	67517-67628	GT	GGG
(GTG)	 AG	68247-68346	GT	ATG
(TTA)	 AG	68596-68701	GT	AGG
(GAT)	 AG	68915-69021	GT	GGG
(TTA)	 AG	69280-69355	GT	AGG
(GAT)	 AG	69447-69538	GT	AGG
(GTT)	 AG	69844-70012	AG	AAA
add_exon() Sorry, pasa_asmbl_17587.p1 58373-58672-initial-1 is invalid.
-recovered pasa_asmbl_17587.p1, initial, 58373, 58672
-recovered pasa_asmbl_17587.p1, terminal, 60943, 61074
-recovered pasa_asmbl_17587.p1, terminal, 63519, 63654
-recovered pasa_asmbl_17587.p1, terminal, 69844, 70012
-recovered pasa_asmbl_17587.p1, internal, 58373, 58672
-recovered pasa_asmbl_17587.p1, internal, 60632, 60778
-recovered pasa_asmbl_17587.p1, internal, 60943, 61074
-recovered pasa_asmbl_17587.p1, internal, 63043, 63149
-recovered pasa_asmbl_17587.p1, internal, 63519, 63654
-recovered pasa_asmbl_17587.p1, internal, 64421, 64525
-recovered pasa_asmbl_17587.p1, internal, 64847, 64960
-recovered pasa_asmbl_17587.p1, internal, 65367, 65455
-recovered pasa_asmbl_17587.p1, internal, 66230, 66332
-recovered pasa_asmbl_17587.p1, internal, 66684, 66775
-recovered pasa_asmbl_17587.p1, internal, 66898, 67020
-recovered pasa_asmbl_17587.p1, internal, 67517, 67628
-recovered pasa_asmbl_17587.p1, internal, 68247, 68346
-recovered pasa_asmbl_17587.p1, internal, 68596, 68701
-recovered pasa_asmbl_17587.p1, internal, 68915, 69021
-recovered pasa_asmbl_17587.p1, internal, 69280, 69355
-recovered pasa_asmbl_17587.p1, internal, 69447, 69538
Valid prediction for GlimmerHMM_glimmerT_39966-T1
Valid prediction for GlimmerHMM_glimmerT_39960-T1
Valid prediction for GeneMark_model.68490_t
Valid prediction for GeneMark_model.68519_t
Valid prediction for snap_scaffold_16-snap.2224-T1
Valid prediction for HiQ_model.g26858.t1
Valid prediction for CodingQuarry_transcript_20061-T1
Valid prediction for GeneMark_model.68526_t
Valid prediction for GlimmerHMM_glimmerT_39968-T1
Valid prediction for GeneMark_model.68517_t
Valid prediction for snap_scaffold_16-snap.2194-T1
Valid prediction for GlimmerHMM_glimmerT_39959-T1
Valid prediction for GlimmerHMM_glimmerT_39949-T1
Couldn't classify 162562, 163416
Sorry, prediction pasa_asmbl_17408.p1 fails validation.
(CAG)	 TG	162562-163416	CC	GAC
Valid prediction for GeneMark_model.68508_t
Valid prediction for snap_scaffold_16-snap.2233-T1
Valid prediction for pasa_asmbl_17405.p1
Valid prediction for GeneMark_model.68496_t
Valid prediction for GeneMark_model.68536_t
Valid prediction for Augustus_model.g26846.t1
Valid prediction for snap_scaffold_16-snap.2204-T1
Valid prediction for snap_scaffold_16-snap.2231-T1
Valid prediction for snap_scaffold_16-snap.2195-T1
Valid prediction for snap_scaffold_16-snap.2212-T1
Valid prediction for snap_scaffold_16-snap.2202-T1
Valid prediction for snap_scaffold_16-snap.2225-T1
Valid prediction for GeneMark_model.68523_t
Couldn't classify 159222, 159258
Couldn't classify 161567, 161712
Sorry, prediction pasa_asmbl_17406.p1 fails validation.
(GAG)	 AG	159222-159258	GT	AGG
(CGG)	 AG	160520-160675	GT	TGG
(GGG)	 AG	161213-161335	GT	TGG
(GGG)	 AG	161567-161712	GG	GCG
-recovered pasa_asmbl_17406.p1, internal, 159222, 159258
-recovered pasa_asmbl_17406.p1, internal, 160520, 160675
-recovered pasa_asmbl_17406.p1, internal, 161213, 161335
Valid prediction for CodingQuarry_transcript_20057-T1
Couldn't classify 94199, 94244
Sorry, prediction pasa_asmbl_17404.p1 fails validation.
(GAC)	 GT	94199-94244	GT	GGG
(GAG)	 AG	94399-94498	GT	GTG
(GTA)	 AG	95010-95115	GT	AGG
(CTA)	 AG	95269-95460	TG	GAT
-recovered pasa_asmbl_17404.p1, terminal, 95269, 95460
-recovered pasa_asmbl_17404.p1, internal, 94399, 94498
-recovered pasa_asmbl_17404.p1, internal, 95010, 95115
Valid prediction for snap_scaffold_16-snap.2232-T1
Valid prediction for GeneMark_model.68531_t
Valid prediction for GeneMark_model.68518_t
Valid prediction for GeneMark_model.68499_t
Valid prediction for GlimmerHMM_glimmerT_39952-T1
Valid prediction for Augustus_model.g26852.t1
Valid prediction for Augustus_model.g26848.t1
Valid prediction for GeneMark_model.68506_t
Valid prediction for snap_scaffold_16-snap.2198-T1
Valid prediction for HiQ_model.g26850.t1
Couldn't classify 14567, 14900
Couldn't classify 15027, 15088
Sorry, prediction pasa_asmbl_17626.p1 fails validation.
(GGG)	 CC	14567-14900	GT	GGG
(GTA)	 AG	15027-15088	GG	AGG
Couldn't classify 41198, 41304
Couldn't classify 43878, 44002
Sorry, prediction pasa_asmbl_17607.p1 fails validation.
(GGT)	 CA	41198-41304	GT	AGG
(AGG)	 AG	41658-41869	GT	AGG
(ACA)	 AG	43878-44002	GT	AGG
-recovered pasa_asmbl_17607.p1, internal, 41658, 41869
-recovered pasa_asmbl_17607.p1, internal, 43878, 44002
Couldn't classify 11232, 11306
Couldn't classify 13737, 13820
Sorry, prediction pasa_asmbl_17395.p1 fails validation.
(GAG)	 AG	11232-11306	GT	AGG
(TGG)	 AG	12129-12308	GT	GGG
(GTG)	 AG	12866-13045	GT	AGG
(GGT)	 AG	13415-13594	GT	AGG
(GGA)	 AG	13737-13820	CG	GAC
-recovered pasa_asmbl_17395.p1, internal, 11232, 11306
-recovered pasa_asmbl_17395.p1, internal, 12129, 12308
-recovered pasa_asmbl_17395.p1, internal, 12866, 13045
-recovered pasa_asmbl_17395.p1, internal, 13415, 13594
Valid prediction for GlimmerHMM_glimmerT_39963-T1
Valid prediction for GeneMark_model.68504_t
Valid prediction for Augustus_model.g26855.t1
Valid prediction for snap_scaffold_16-snap.2217-T1
Valid prediction for Augustus_model.g26849.t1
Valid prediction for snap_scaffold_16-snap.2214-T1
Valid prediction for GlimmerHMM_glimmerT_39958-T1
Valid prediction for GeneMark_model.68515_t
Valid prediction for snap_scaffold_16-snap.2227-T1
Valid prediction for GeneMark_model.68494_t
Valid prediction for snap_scaffold_16-snap.2215-T1
Valid prediction for snap_scaffold_16-snap.2211-T1
Valid prediction for snap_scaffold_16-snap.2223-T1
Valid prediction for GeneMark_model.68497_t
Valid prediction for snap_scaffold_16-snap.2206-T1
Valid prediction for GeneMark_model.68528_t
Valid prediction for GeneMark_model.68509_t
Valid prediction for Augustus_model.g26847.t1
Valid prediction for GeneMark_model.68533_t
Valid prediction for GeneMark_model.68492_t
Valid prediction for GeneMark_model.68500_t

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for snap_scaffold_16-snap.2213-T1
Valid prediction for pasa_asmbl_16535.p1
Couldn't classify 9853, 9886
Sorry, prediction pasa_asmbl_16546.p1 fails validation.
(GGG)	 TG	9853-9886	GT	TGG
(CCG)	 AG	9992-10123	GT	CGG
(ACA)	 AG	10250-10393	GT	AGG
(ATA)	 AG	10808-10877	GT	ACG
(GTA)	 AG	10990-11062	GT	TGG
(CTA)	 AG	11171-11268	GT	GAG
(TGT)	 AG	11711-11798	GT	ATG
(AAG)	 AG	12026-12187	GT	AGG
(CGC)	 AG	12558-12683	CC	GAC
-recovered pasa_asmbl_16546.p1, terminal, 12558, 12683
-recovered pasa_asmbl_16546.p1, internal, 9992, 10123
-recovered pasa_asmbl_16546.p1, internal, 10250, 10393
-recovered pasa_asmbl_16546.p1, internal, 10808, 10877
-recovered pasa_asmbl_16546.p1, internal, 10990, 11062
-recovered pasa_asmbl_16546.p1, internal, 11171, 11268
-recovered pasa_asmbl_16546.p1, internal, 11711, 11798
-recovered pasa_asmbl_16546.p1, internal, 12026, 12187
Valid prediction for GeneMark_model.68529_t
Valid prediction for GeneMark_model.68502_t
Valid prediction for snap_scaffold_16-snap.2203-T1
Valid prediction for GlimmerHMM_glimmerT_39970-T1
Valid prediction for Augustus_model.g26860.t1
Valid prediction for GeneMark_model.68524_t
Valid prediction for snap_scaffold_16-snap.2209-T1
Couldn't classify 60693, 61328
Sorry, prediction pasa_asmbl_16537.p1 fails validation.
(CCG)	 TT	60693-61328	AT	GAA
Couldn't classify 19448, 19610
Couldn't classify 24038, 24125
Sorry, prediction pasa_asmbl_16543.p1 fails validation.
(AGT)	 AG	19448-19610	GT	GAG
(GTA)	 AG	21533-21667	GT	AGG
(TCT)	 AG	22083-22236	GT	AGG
(GGA)	 AG	22343-22460	GT	AGG
(GAG)	 AG	22834-23015	GT	AGG
(GGG)	 AG	23387-23653	GT	AGG
(TAT)	 AG	24038-24125	GG	GGG
add_exon() Sorry, pasa_asmbl_16543.p1 19448-19610-terminal-3 is invalid.
-recovered pasa_asmbl_16543.p1, terminal, 19448, 19610
-recovered pasa_asmbl_16543.p1, internal, 19448, 19610
-recovered pasa_asmbl_16543.p1, internal, 21533, 21667
-recovered pasa_asmbl_16543.p1, internal, 22083, 22236
-recovered pasa_asmbl_16543.p1, internal, 22343, 22460
-recovered pasa_asmbl_16543.p1, internal, 22834, 23015
-recovered pasa_asmbl_16543.p1, internal, 23387, 23653
Valid prediction for snap_scaffold_16-snap.2207-T1
Valid prediction for GeneMark_model.68513_t
Valid prediction for snap_scaffold_16-snap.2200-T1
Valid prediction for GlimmerHMM_glimmerT_39962-T1
Valid prediction for GeneMark_model.68507_t
Valid prediction for GeneMark_model.68522_t
Valid prediction for GlimmerHMM_glimmerT_39961-T1
Valid prediction for snap_scaffold_16-snap.2226-T1
Valid prediction for GeneMark_model.68511_t
Valid prediction for snap_scaffold_16-snap.2222-T1
Valid prediction for GlimmerHMM_glimmerT_39956-T1
Valid prediction for GeneMark_model.68510_t
Valid prediction for snap_scaffold_16-snap.2197-T1
Valid prediction for snap_scaffold_16-snap.2201-T1
Valid prediction for GeneMark_model.68535_t
Valid prediction for CodingQuarry_transcript_20060-T1
Valid prediction for GeneMark_model.68491_t
Valid prediction for GlimmerHMM_glimmerT_39953-T1
Valid prediction for GlimmerHMM_glimmerT_39950-T1
Valid prediction for GeneMark_model.68516_t
Valid prediction for HiQ_model.g26851.t1
Valid prediction for GeneMark_model.68521_t
Valid prediction for snap_scaffold_16-snap.2205-T1
Valid prediction for GlimmerHMM_glimmerT_39954-T1
Couldn't classify 47082, 47085
Sorry, prediction pasa_asmbl_16538.p1 fails validation.
(AGG)	 AC	47082-47085	GT	GGG
(TCC)	 AG	47264-47496	GT	AGG
(GAG)	 AG	47570-47629	GT	AGG
(AAA)	 AG	47732-47842	TG	GAT
-recovered pasa_asmbl_16538.p1, terminal, 47732, 47842
-recovered pasa_asmbl_16538.p1, internal, 47264, 47496
-recovered pasa_asmbl_16538.p1, internal, 47570, 47629
Valid prediction for GeneMark_model.68501_t
Valid prediction for snap_scaffold_16-snap.2208-T1
Valid prediction for snap_scaffold_16-snap.2220-T1
Valid prediction for pasa_asmbl_16539.p2
Valid prediction for snap_scaffold_16-snap.2230-T1
Valid prediction for GlimmerHMM_glimmerT_39957-T1
Valid prediction for snap_scaffold_16-snap.2193-T1
Valid prediction for GeneMark_model.68534_t
Valid prediction for snap_scaffold_16-snap.2192-T1
Valid prediction for GeneMark_model.68505_t
Valid prediction for GeneMark_model.68525_t
Valid prediction for snap_scaffold_16-snap.2196-T1
Valid prediction for GlimmerHMM_glimmerT_39965-T1
Valid prediction for GeneMark_model.68495_t
Valid prediction for CodingQuarry_transcript_20058-T1
Valid prediction for HiQ_model.g26857.t1
Valid prediction for snap_scaffold_16-snap.2216-T1
Valid prediction for GeneMark_model.68493_t
Valid prediction for GeneMark_model.68498_t
Valid prediction for GeneMark_model.68530_t
Valid prediction for GeneMark_model.68503_t
Valid prediction for snap_scaffold_16-snap.2218-T1
Valid prediction for Augustus_model.g26856.t1
Valid prediction for Augustus_model.g26854.t1
Valid prediction for GlimmerHMM_glimmerT_39971-T1
Valid prediction for Augustus_model.g26853.t1
Valid prediction for GeneMark_model.68520_t
Valid prediction for GlimmerHMM_glimmerT_39964-T1
Valid prediction for HiQ_model.g26861.t1
Valid prediction for snap_scaffold_16-snap.2221-T1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 7923, rend_intergenic: 3359  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 14018, rend_intergenic: 9161  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 25008, rend_intergenic: 17734  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 35852, rend_intergenic: 26799  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 51460, rend_intergenic: 42413  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 55024, rend_intergenic: 51935  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 60952, rend_intergenic: 55398  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 70012, rend_intergenic: 61405  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 76925, rend_intergenic: 73543  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 93614, rend_intergenic: 91068  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 115420, rend_intergenic: 110090  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 148762, rend_intergenic: 138792  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 157853, rend_intergenic: 152168  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 164338
-exon list size: 752


building trellis

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44.8    
45.0    
45.1    
45.2    
45.4    
45.5    
45.6    
45.8    
45.9    
46.0    
46.2    
46.3    
46.4    
46.6    
46.7    
46.8    
46.9    
47.1    
47.2    
47.3    
47.5    
47.6    
47.7    
47.9    
48.0    
48.1    
48.3    
48.4    
48.5    
48.7    
48.8    
48.9    
49.1    
49.2    
49.3    
49.5    
49.6    
49.7    
49.9    
50.0    
50.1    
50.3    
50.4    
50.5    
50.7    
50.8    
50.9    
51.1    
51.2    
51.3    
51.5    
51.6    
51.7    
51.9    
52.0    
52.1    
52.3    
52.4    
52.5    
52.7    
52.8    
52.9    
53.1    
53.2    
53.3    
53.4    
53.6    
53.7    
53.8    
54.0    
54.1    
54.2    
54.4    
54.5    
54.6    
54.8    
54.9    
55.0    
55.2    
55.3    
55.4    
55.6    
55.7    
55.8    
56.0    
56.1    
56.2    
56.4    
56.5    
56.6    
56.8    
56.9    
57.0    
57.2    
57.3    
57.4    
57.6    
57.7    
57.8    
58.0    
58.1    
58.2    
58.4    
58.5    
58.6    
58.8    
58.9    
59.0    
59.2    
59.3    
59.4    
59.5    
59.7    
59.8    
59.9    
60.1    
60.2    
60.3    
60.5    
60.6    
60.7    
60.9    
61.0    
61.1    
61.3    
61.4    
61.5    
61.7    
61.8    
61.9    
62.1    
62.2    
62.3    
62.5    
62.6    
62.7    
62.9    
63.0    
63.1    
63.3    
63.4    
63.5    
63.7    
63.8    
63.9    
64.1    
64.2    
64.3    
64.5    
64.6    
64.7    
64.9    
65.0    
65.1    
65.3    
65.4    
65.5    
65.6    
65.8    
65.9    
66.0    
66.2    
66.3    
66.4    
66.6    
66.7    
66.8    
67.0    
67.1    
67.2    
67.4    
67.5    
67.6    
67.8    
67.9    
68.0    
68.2    
68.3    
68.4    
68.6    
68.7    
68.8    
69.0    
69.1    
69.2    
69.4    
69.5    
69.6    
69.8    
69.9    
70.0    
70.2    
70.3    
70.4    
70.6    
70.7    
70.8    
71.0    
71.1    
71.2    
71.4    
71.5    
71.6    
71.8    
71.9    
72.0    
72.1    
72.3    
72.4    
72.5    
72.7    
72.8    
72.9    
73.1    
73.2    
73.3    
73.5    
73.6    
73.7    
73.9    
74.0    
74.1    
74.3    
74.4    
74.5    
74.7    
74.8    
74.9    
75.1    
75.2    
75.3    
75.5    
75.6    
75.7    
75.9    
76.0    
76.1    
76.3    
76.4    
76.5    
76.7    
76.8    
76.9    
77.1    
77.2    
77.3    
77.5    
77.6    
77.7    
77.9    
78.0    
78.1    
78.2    
78.4    
78.5    
78.6    
78.8    
78.9    
79.0    
79.2    
79.3    
79.4    
79.6    
79.7    
79.8    
80.0    
80.1    
80.2    
80.4    
80.5    
80.6    
80.8    
80.9    
81.0    
81.2    
81.3    
81.4    
81.6    
81.7    
81.8    
82.0    
82.1    
82.2    
82.4    
82.5    
82.6    
82.8    
82.9    
83.0    
83.2    
83.3    
83.4    
83.6    
83.7    
83.8    
84.0    
84.1    
84.2    
84.4    
84.5    
84.6    
84.7    
84.9    
85.0    
85.1    
85.3    
85.4    
85.5    
85.7    
85.8    
85.9    
86.1    
86.2    
86.3    
86.5    
86.6    
86.7    
86.9    
87.0    
87.1    
87.3    
87.4    
87.5    
87.7    
87.8    
87.9    
88.1    
88.2    
88.3    
88.5    
88.6    
88.7    
88.9    
89.0    
89.1    
89.3    
89.4    
89.5    
89.7    
89.8    
89.9    
90.1    
90.2    
90.3    
90.5    
90.6    
90.7    
90.8    
91.0    
91.1    
91.2    
91.4    
91.5    
91.6    
91.8    
91.9    
92.0    
92.2    
92.3    
92.4    
92.6    
92.7    
92.8    
93.0    
93.1    
93.2    
93.4    
93.5    
93.6    
93.8    
93.9    
94.0    
94.2    
94.3    
94.4    
94.6    
94.7    
94.8    
95.0    
95.1    
95.2    
95.4    
95.5    
95.6    
95.8    
95.9    
96.0    
96.2    
96.3    
96.4    
96.6    
96.7    
96.8    
96.9    
97.1    
97.2    
97.3    
97.5    
97.6    
97.7    
97.9    
98.0    
98.1    
98.3    
98.4    
98.5    
98.7    
98.8    
98.9    
99.1    
99.2    
99.3    
99.5    
99.6    
99.7    
99.9    
-found 30 predictions from path traversal
Error with prediction: snap lend_intergenic: 7923, rend_intergenic: 3359  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 14018, rend_intergenic: 9161  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 25008, rend_intergenic: 17734  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 35852, rend_intergenic: 26799  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 51460, rend_intergenic: 42413  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 55024, rend_intergenic: 51935  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 60952, rend_intergenic: 55398  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 70012, rend_intergenic: 61405  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 76925, rend_intergenic: 73543  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 93614, rend_intergenic: 91068  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 115420, rend_intergenic: 110090  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 148762, rend_intergenic: 138792  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 157853, rend_intergenic: 152168  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 22 predictions persist after filtering for low support