-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_1596

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for Augustus_model.g41754.t1
Couldn't classify 1951, 2084
Sorry, prediction snap_scaffold_1596-snap.1-T1 fails validation.
(ATG)	 CC	1130-1336	GT	ATG
(ATA)	 AG	1508-1595	GT	AGG
(GTA)	 AG	1951-2084	GT	CGG
-recovered snap_scaffold_1596-snap.1-T1, initial, 1130, 1336
-recovered snap_scaffold_1596-snap.1-T1, internal, 1508, 1595
-recovered snap_scaffold_1596-snap.1-T1, internal, 1951, 2084

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)
-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 2172
-exon list size: 8


building trellis

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-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 1 predictions persist after filtering for low support