-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_1564

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Couldn't classify 667, 780
Sorry, prediction GeneMark_model.109483_t fails validation.
(AGG)	 AG	667-780	GT	AGG
(GGA)	 AG	873-920	GT	GGG
(AGA)	 AG	1050-1116	CG	AGC
-recovered GeneMark_model.109483_t, terminal, 1050, 1116
-recovered GeneMark_model.109483_t, internal, 667, 780
-recovered GeneMark_model.109483_t, internal, 873, 920

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for snap_scaffold_1564-snap.1-T1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 2212
-exon list size: 8


building trellis

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-found 1 predictions from path traversal

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support