-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_1516

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Couldn't classify 1590, 1619
Couldn't classify 2097, 2270
Sorry, prediction GeneMark_model.109420_t fails validation.
(GAG)	 AG	1590-1619	GT	GGG
(AGA)	 AG	1677-1715	GT	GAG
(AGA)	 AG	1858-1943	GT	ATG
(CAA)	 AG	2097-2270	GT	GAG
-recovered GeneMark_model.109420_t, internal, 1590, 1619
-recovered GeneMark_model.109420_t, internal, 1677, 1715
-recovered GeneMark_model.109420_t, internal, 1858, 1943
-recovered GeneMark_model.109420_t, internal, 2097, 2270

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Couldn't classify 63, 246
Sorry, prediction snap_scaffold_1516-snap.1-T1 fails validation.
(CTC)	 AG	63-246	GT	ACG
-recovered snap_scaffold_1516-snap.1-T1, internal, 63, 246

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 2286
-exon list size: 9


building trellis

9.1    
18.2    
27.3    
36.4    
45.5    
54.5    
63.6    
72.7    
81.8    
90.9    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support