-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_1507

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Couldn't classify 1704, 1942
Sorry, prediction snap_scaffold_1507-snap.1-T1 fails validation.
(GAG)	 AG	1704-1942	GT	GGG
-recovered snap_scaffold_1507-snap.1-T1, internal, 1704, 1942
Valid prediction for GeneMark_model.109411_t

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Couldn't classify 34, 248
Sorry, prediction snap_scaffold_1507-snap.2-T1 fails validation.
(GAG)	 AG	34-248	GT	GGG
-recovered snap_scaffold_1507-snap.2-T1, internal, 34, 248
Couldn't classify 1751, 1765
Sorry, prediction GeneMark_model.109410_t fails validation.
(ATG)	 GG	1362-1394	GT	CAG
(GGG)	 AG	1460-1470	GT	GAG
(TCT)	 AG	1501-1515	GT	CAG
(GGG)	 AG	1660-1716	GT	GGG
(TGA)	 AG	1751-1765	GT	AGG
-recovered GeneMark_model.109410_t, initial, 1362, 1394
-recovered GeneMark_model.109410_t, internal, 1460, 1470
-recovered GeneMark_model.109410_t, internal, 1501, 1515
-recovered GeneMark_model.109410_t, internal, 1660, 1716
-recovered GeneMark_model.109410_t, internal, 1751, 1765

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 2302
-exon list size: 18


building trellis

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50.0    
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-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support