-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_15/scaffold_15_3698970-3978003 -reading genomic sequence. ** Processing features (+) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: +) -loading gene prediction evidence. (strand: +)Valid prediction for GeneMark_model.63196_t Valid prediction for snap_scaffold_15-snap.833-T1 Couldn't classify 202927, 203006 Couldn't classify 204157, 204176 Sorry, prediction pasa_asmbl_14813.p1 fails validation. (GAT) AG 202927-203006 GT AGG (TAA) AG 203442-203526 GT CAG (ATC) AG 203635-203725 GT GAG (AAC) AG 203850-203945 GT CTG (GTG) AG 204157-204176 AT GGA -recovered pasa_asmbl_14813.p1, internal, 202927, 203006 -recovered pasa_asmbl_14813.p1, internal, 203442, 203526 -recovered pasa_asmbl_14813.p1, internal, 203635, 203725 -recovered pasa_asmbl_14813.p1, internal, 203850, 203945 Valid prediction for GeneMark_model.63159_t Valid prediction for snap_scaffold_15-snap.831-T1 Valid prediction for GeneMark_model.63211_t Valid prediction for Augustus_model.g24642.t1 Valid prediction for GlimmerHMM_glimmerT_36695-T1 Valid prediction for GeneMark_model.63186_t Valid prediction for snap_scaffold_15-snap.846-T1 Valid prediction for GlimmerHMM_glimmerT_36696-T1 Valid prediction for Augustus_model.g24640.t1 Valid prediction for GeneMark_model.63168_t Valid prediction for GeneMark_model.63139_t Valid prediction for GeneMark_model.63214_t Valid prediction for GeneMark_model.63218_t Valid prediction for snap_scaffold_15-snap.848-T1 Valid prediction for GeneMark_model.63150_t Valid prediction for snap_scaffold_15-snap.842-T1 Valid prediction for snap_scaffold_15-snap.800-T1 Valid prediction for GeneMark_model.63221_t Valid prediction for snap_scaffold_15-snap.815-T1 Valid prediction for Augustus_model.g24626.t1 Valid prediction for snap_scaffold_15-snap.813-T1 Valid prediction for Augustus_model.g24631.t1 Valid prediction for GlimmerHMM_glimmerT_36712-T1 Valid prediction for GeneMark_model.63220_t Valid prediction for GlimmerHMM_glimmerT_36694-T1 Valid prediction for HiQ_model.g24628.t1 Valid prediction for GeneMark_model.63222_t Valid prediction for snap_scaffold_15-snap.853-T1 Valid prediction for snap_scaffold_15-snap.843-T1 Valid prediction for Augustus_model.g24650.t1 Valid prediction for GeneMark_model.63157_t Valid prediction for GlimmerHMM_glimmerT_36697-T1 Valid prediction for GeneMark_model.63135_t Valid prediction for snap_scaffold_15-snap.802-T1 Valid prediction for GlimmerHMM_glimmerT_36689-T1 Valid prediction for GlimmerHMM_glimmerT_36698-T1 Valid prediction for GlimmerHMM_glimmerT_36708-T1 Valid prediction for snap_scaffold_15-snap.822-T1 Valid prediction for Augustus_model.g24627.t1 Valid prediction for snap_scaffold_15-snap.836-T1 Valid prediction for GeneMark_model.63198_t Valid prediction for snap_scaffold_15-snap.810-T1 Couldn't classify 144764, 144938 Couldn't classify 146807, 146846 Sorry, prediction pasa_asmbl_14049.p1 fails validation. (CTG) AG 144764-144938 GT AGG (GCT) AG 145906-145992 GT AGG (GAG) AG 146115-146185 GT ATG (GGG) AG 146299-146395 GT ACG (AGA) AG 146559-146643 GT GAG (ATA) AG 146807-146846 AC GTA -recovered pasa_asmbl_14049.p1, terminal, 145906, 145992 -recovered pasa_asmbl_14049.p1, internal, 144764, 144938 -recovered pasa_asmbl_14049.p1, internal, 145906, 145992 -recovered pasa_asmbl_14049.p1, internal, 146115, 146185 -recovered pasa_asmbl_14049.p1, internal, 146299, 146395 -recovered pasa_asmbl_14049.p1, internal, 146559, 146643 Valid prediction for GeneMark_model.63180_t Valid prediction for GlimmerHMM_glimmerT_36692-T1 Valid prediction for GlimmerHMM_glimmerT_36693-T1 Valid prediction for Augustus_model.g24646.t1 Valid prediction for Augustus_model.g24647.t1 Valid prediction for Augustus_model.g24644.t1 Valid prediction for Augustus_model.g24638.t1 Valid prediction for snap_scaffold_15-snap.806-T1 Sorry, intron length (7) is less than minimum required (10) Valid prediction for snap_scaffold_15-snap.850-T1 Valid prediction for GeneMark_model.63216_t Valid prediction for snap_scaffold_15-snap.824-T1 Valid prediction for GeneMark_model.63178_t Valid prediction for GeneMark_model.63187_t Couldn't classify 148113, 148140 Couldn't classify 154381, 154401 Sorry, prediction pasa_asmbl_14050.p1 fails validation. (AAG) TG 148113-148140 GT AGG (ATG) AG 148465-148580 GT AGG (GTT) AG 150076-150214 GT AGG (GCC) AG 150452-150505 GT AGG (ATG) AG 150889-151108 GT AGG (CAG) AG 151914-152082 GT AGG (CTG) AG 152967-153043 GT AAG (AGA) AG 153226-153315 GT GAG (GGA) AG 153428-153485 GT GGG (CTG) AG 153710-153796 GT AGG (GAG) AG 154381-154401 CT ACC add_exon() Sorry, pasa_asmbl_14050.p1 148465-148580-initial-1 is invalid. -recovered pasa_asmbl_14050.p1, initial, 148465, 148580 add_exon() Sorry, pasa_asmbl_14050.p1 150889-151108-initial-1 is invalid. -recovered pasa_asmbl_14050.p1, initial, 150889, 151108 -recovered pasa_asmbl_14050.p1, internal, 148465, 148580 -recovered pasa_asmbl_14050.p1, internal, 150076, 150214 -recovered pasa_asmbl_14050.p1, internal, 150452, 150505 -recovered pasa_asmbl_14050.p1, internal, 150889, 151108 -recovered pasa_asmbl_14050.p1, internal, 151914, 152082 -recovered pasa_asmbl_14050.p1, internal, 152967, 153043 -recovered pasa_asmbl_14050.p1, internal, 153226, 153315 -recovered pasa_asmbl_14050.p1, internal, 153428, 153485 -recovered pasa_asmbl_14050.p1, internal, 153710, 153796 Couldn't classify 210067, 210135 Couldn't classify 213751, 213839 Sorry, prediction pasa_asmbl_14055.p1 fails validation. (GAC) CA 210067-210135 GT AGG (GTT) AG 210313-210477 GT AAG (GTG) AG 212971-213175 GT AGG (CTA) AG 213751-213839 GT CGG -recovered pasa_asmbl_14055.p1, internal, 210313, 210477 -recovered pasa_asmbl_14055.p1, internal, 212971, 213175 -recovered pasa_asmbl_14055.p1, internal, 213751, 213839 Valid prediction for GlimmerHMM_glimmerT_36714-T1 Valid prediction for GeneMark_model.63153_t Couldn't classify 215993, 216048 Sorry, prediction pasa_asmbl_14057.p1 fails validation. (GAC) AC 215993-216048 GT GGG (GGA) AG 216241-216316 GT AGG (GTG) AG 216413-216588 GT CGG (ACA) AG 217313-217414 GT AGG (GAG) AG 217533-217590 GT GGG (CTG) AG 217710-217796 GT AGG (CTT) AG 218413-218443 GT AGG (GCC) AG 220044-220120 GG GAG -recovered pasa_asmbl_14057.p1, terminal, 220044, 220120 -recovered pasa_asmbl_14057.p1, internal, 216241, 216316 -recovered pasa_asmbl_14057.p1, internal, 216413, 216588 -recovered pasa_asmbl_14057.p1, internal, 217313, 217414 -recovered pasa_asmbl_14057.p1, internal, 217533, 217590 -recovered pasa_asmbl_14057.p1, internal, 217710, 217796 -recovered pasa_asmbl_14057.p1, internal, 218413, 218443 Couldn't classify 197361, 197495 Couldn't classify 201697, 201819 Sorry, prediction pasa_asmbl_14053.p1 fails validation. (ATC) AG 197361-197495 GT GGG (AAA) AG 199126-199205 GT CAG (TTG) AG 199326-199379 GT GGG (AAT) AG 199509-199590 GT AGG (AAC) AG 199898-199998 GT ATG (CAA) AG 200329-200386 GT AAG (AAC) AG 201697-201819 GG GAG -recovered pasa_asmbl_14053.p1, internal, 197361, 197495 -recovered pasa_asmbl_14053.p1, internal, 199126, 199205 -recovered pasa_asmbl_14053.p1, internal, 199326, 199379 -recovered pasa_asmbl_14053.p1, internal, 199509, 199590 -recovered pasa_asmbl_14053.p1, internal, 199898, 199998 -recovered pasa_asmbl_14053.p1, internal, 200329, 200386 Valid prediction for snap_scaffold_15-snap.819-T1 Valid prediction for GeneMark_model.63141_t Valid prediction for GeneMark_model.63146_t Valid prediction for GlimmerHMM_glimmerT_36679-T1 Valid prediction for GlimmerHMM_glimmerT_36699-T1 Valid prediction for GeneMark_model.63151_t Valid prediction for GlimmerHMM_glimmerT_36684-T1 Valid prediction for GeneMark_model.63204_t Valid prediction for GlimmerHMM_glimmerT_36707-T1 Valid prediction for snap_scaffold_15-snap.851-T1 Valid prediction for snap_scaffold_15-snap.844-T1 Valid prediction for GeneMark_model.63163_t Valid prediction for GeneMark_model.63172_t Valid prediction for snap_scaffold_15-snap.820-T1 Valid prediction for snap_scaffold_15-snap.852-T1 Valid prediction for GeneMark_model.63156_t Valid prediction for GeneMark_model.63206_t Valid prediction for Augustus_model.g24632.t1 Valid prediction for GeneMark_model.63170_t Valid prediction for GlimmerHMM_glimmerT_36680-T1 Valid prediction for snap_scaffold_15-snap.826-T1 Valid prediction for GeneMark_model.63213_t Valid prediction for Augustus_model.g24643.t1 Valid prediction for GeneMark_model.63189_t Valid prediction for GlimmerHMM_glimmerT_36685-T1 Valid prediction for snap_scaffold_15-snap.817-T1 Valid prediction for snap_scaffold_15-snap.814-T1 Valid prediction for Augustus_model.g24637.t1 Valid prediction for GlimmerHMM_glimmerT_36705-T1 Valid prediction for GeneMark_model.63166_t Valid prediction for GlimmerHMM_glimmerT_36681-T1 Valid prediction for snap_scaffold_15-snap.804-T1 Valid prediction for GlimmerHMM_glimmerT_36710-T1 Valid prediction for snap_scaffold_15-snap.828-T1 Valid prediction for GlimmerHMM_glimmerT_36701-T1 Valid prediction for GeneMark_model.63174_t Valid prediction for GeneMark_model.63209_t Valid prediction for GeneMark_model.63148_t Valid prediction for GeneMark_model.63136_t Valid prediction for GeneMark_model.63176_t Valid prediction for GeneMark_model.63202_t Valid prediction for GeneMark_model.63200_t Valid prediction for snap_scaffold_15-snap.835-T1 -loading the search evidence (protein and EST search results, strand: +) -scoring exons (strand: +) ** Processing features (-) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: -) -loading gene prediction evidence. (strand: -)Couldn't classify 40830, 40958 Sorry, prediction pasa_asmbl_15126.p1 fails validation. (AGA) TC 40830-40958 GT GGG (ATA) AG 43500-43625 GT AGG (GTG) AG 44055-44189 GT AGG (GTG) AG 44469-44624 CC GAC -recovered pasa_asmbl_15126.p1, terminal, 44469, 44624 -recovered pasa_asmbl_15126.p1, internal, 43500, 43625 -recovered pasa_asmbl_15126.p1, internal, 44055, 44189 Valid prediction for GeneMark_model.63183_t Valid prediction for snap_scaffold_15-snap.807-T1 Valid prediction for GeneMark_model.63138_t Valid prediction for GeneMark_model.63217_t Valid prediction for GlimmerHMM_glimmerT_36682-T1 Valid prediction for pasa_asmbl_15123.p1 Valid prediction for snap_scaffold_15-snap.801-T1 Valid prediction for GeneMark_model.63215_t Valid prediction for snap_scaffold_15-snap.838-T1 Valid prediction for CodingQuarry_transcript_17920-T1 Valid prediction for snap_scaffold_15-snap.837-T1 Valid prediction for GeneMark_model.63160_t Valid prediction for GeneMark_model.63144_t Couldn't classify 29766, 30308 Sorry, prediction pasa_asmbl_15128.p1 fails validation. (TAC) AC 29766-30308 CC TCC Valid prediction for GeneMark_model.63201_t Valid prediction for snap_scaffold_15-snap.825-T1 Couldn't classify 35050, 35097 Couldn't classify 37146, 37277 Sorry, prediction pasa_asmbl_15127.p1 fails validation. (CCC) CC 35050-35097 GT AGG (GGG) AG 35174-35315 GT AGG (GTG) AG 35749-35903 GT AGG (GTG) AG 37146-37277 AG CGA -recovered pasa_asmbl_15127.p1, internal, 35174, 35315 -recovered pasa_asmbl_15127.p1, internal, 35749, 35903 Valid prediction for GlimmerHMM_glimmerT_36703-T1 Valid prediction for GeneMark_model.63137_t Valid prediction for Augustus_model.g24656.t1 Valid prediction for snap_scaffold_15-snap.854-T1 Valid prediction for GeneMark_model.63147_t Valid prediction for snap_scaffold_15-snap.797-T1 Valid prediction for Augustus_model.g24654.t1 Valid prediction for snap_scaffold_15-snap.809-T1 Valid prediction for Augustus_model.g24645.t1 Valid prediction for snap_scaffold_15-snap.799-T1 Valid prediction for snap_scaffold_15-snap.805-T1 Valid prediction for snap_scaffold_15-snap.821-T1 Valid prediction for GeneMark_model.63142_t Valid prediction for snap_scaffold_15-snap.818-T1 Valid prediction for HiQ_model.g24629.t1 Valid prediction for snap_scaffold_15-snap.840-T1 Valid prediction for GeneMark_model.63212_t Valid prediction for GeneMark_model.63181_t Valid prediction for GeneMark_model.63169_t Valid prediction for GeneMark_model.63197_t Valid prediction for GeneMark_model.63219_t Valid prediction for GeneMark_model.63195_t Valid prediction for GeneMark_model.63190_t Valid prediction for GeneMark_model.63185_t Valid prediction for snap_scaffold_15-snap.808-T1 Valid prediction for Augustus_model.g24633.t1 Valid prediction for snap_scaffold_15-snap.829-T1 Valid prediction for GeneMark_model.63203_t Valid prediction for GeneMark_model.63175_t Valid prediction for GeneMark_model.63208_t Valid prediction for Augustus_model.g24649.t1 Valid prediction for snap_scaffold_15-snap.847-T1 Valid prediction for GeneMark_model.63167_t Valid prediction for GlimmerHMM_glimmerT_36706-T1 Valid prediction for snap_scaffold_15-snap.834-T1 Valid prediction for Augustus_model.g24655.t1 Valid prediction for Augustus_model.g24634.t1 Valid prediction for Augustus_model.g24648.t1 Valid prediction for GlimmerHMM_glimmerT_36704-T1 Valid prediction for GlimmerHMM_glimmerT_36700-T1 Valid prediction for GeneMark_model.63165_t Valid prediction for snap_scaffold_15-snap.841-T1 Valid prediction for GeneMark_model.63152_t Valid prediction for GeneMark_model.63210_t Valid prediction for GlimmerHMM_glimmerT_36687-T1 Valid prediction for GlimmerHMM_glimmerT_36688-T1 Valid prediction for GlimmerHMM_glimmerT_36715-T1 Valid prediction for GeneMark_model.63205_t Valid prediction for GlimmerHMM_glimmerT_36690-T1 Valid prediction for GeneMark_model.63193_t Valid prediction for GeneMark_model.63194_t Valid prediction for GlimmerHMM_glimmerT_36709-T1 Valid prediction for snap_scaffold_15-snap.816-T1 Valid prediction for snap_scaffold_15-snap.849-T1 Valid prediction for GeneMark_model.63140_t Valid prediction for GlimmerHMM_glimmerT_36711-T1 Valid prediction for snap_scaffold_15-snap.830-T1 Valid prediction for GeneMark_model.63179_t Valid prediction for GeneMark_model.63158_t Valid prediction for Augustus_model.g24636.t1 Valid prediction for snap_scaffold_15-snap.845-T1 Valid prediction for GeneMark_model.63177_t Valid prediction for Augustus_model.g24653.t1 Valid prediction for GeneMark_model.63207_t Valid prediction for GlimmerHMM_glimmerT_36683-T1 Valid prediction for snap_scaffold_15-snap.839-T1 Valid prediction for GeneMark_model.63161_t Valid prediction for snap_scaffold_15-snap.812-T1 Valid prediction for GlimmerHMM_glimmerT_36702-T1 Valid prediction for snap_scaffold_15-snap.832-T1 Valid prediction for snap_scaffold_15-snap.811-T1 Valid prediction for Augustus_model.g24639.t1 Valid prediction for Augustus_model.g24651.t1 Valid prediction for GeneMark_model.63143_t Valid prediction for Augustus_model.g24635.t1 Valid prediction for GeneMark_model.63171_t Valid prediction for GeneMark_model.63145_t Valid prediction for GlimmerHMM_glimmerT_36713-T1 Valid prediction for GeneMark_model.63154_t Valid prediction for GeneMark_model.63149_t Valid prediction for GlimmerHMM_glimmerT_36686-T1 Valid prediction for GeneMark_model.63199_t Valid prediction for GeneMark_model.63164_t Valid prediction for GeneMark_model.63192_t Valid prediction for snap_scaffold_15-snap.803-T1 Couldn't classify 265952, 266067 Sorry, prediction pasa_asmbl_15124.p1 fails validation. (ATG) GA 264192-264298 GT AAG (GAA) AG 264543-264670 GT CGG (ATG) AG 264868-264977 GT AGG (GAA) AG 265076-265167 GT AAG (GTA) AG 265252-265335 GT CTG (CCA) AG 265485-265609 GT AGG (GGT) AG 265952-266067 GT ACG -recovered pasa_asmbl_15124.p1, initial, 264192, 264298 add_exon() Sorry, pasa_asmbl_15124.p1 264868-264977-initial-1 is invalid. -recovered pasa_asmbl_15124.p1, initial, 264868, 264977 -recovered pasa_asmbl_15124.p1, internal, 264543, 264670 -recovered pasa_asmbl_15124.p1, internal, 264868, 264977 -recovered pasa_asmbl_15124.p1, internal, 265076, 265167 -recovered pasa_asmbl_15124.p1, internal, 265252, 265335 -recovered pasa_asmbl_15124.p1, internal, 265485, 265609 -recovered pasa_asmbl_15124.p1, internal, 265952, 266067 Valid prediction for Augustus_model.g24630.t1 Valid prediction for GeneMark_model.63162_t Valid prediction for GeneMark_model.63188_t Valid prediction for Augustus_model.g24652.t1 Valid prediction for GeneMark_model.63184_t Valid prediction for Augustus_model.g24641.t1 Valid prediction for GeneMark_model.63155_t Valid prediction for snap_scaffold_15-snap.827-T1 Valid prediction for snap_scaffold_15-snap.823-T1 Couldn't classify 117168, 117518 Sorry, prediction pasa_asmbl_14051.p1 fails validation. (CCG) TG 117168-117518 AG TCA Valid prediction for snap_scaffold_15-snap.798-T1 Valid prediction for GlimmerHMM_glimmerT_36691-T1 Valid prediction for GeneMark_model.63191_t Valid prediction for GeneMark_model.63173_t -loading the search evidence (protein and EST search results, strand: -) -scoring exons (strand: -)Error with prediction: snap lend_intergenic: 39917, rend_intergenic: 36855 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 46838, rend_intergenic: 45890 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 56897, rend_intergenic: 54524 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 71884, rend_intergenic: 64810 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 84203, rend_intergenic: 77818 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 90865, rend_intergenic: 84988 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 99605, rend_intergenic: 93634 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 100936, rend_intergenic: 100764 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 103656, rend_intergenic: 101504 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 106549, rend_intergenic: 104710 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 112993, rend_intergenic: 107139 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 119746, rend_intergenic: 114885 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 131610, rend_intergenic: 121203 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 149535, rend_intergenic: 132311 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 149825, rend_intergenic: 149740 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 163204, rend_intergenic: 150463 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 179139, rend_intergenic: 174466 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 182656, rend_intergenic: 179248 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 220472, rend_intergenic: 187967 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 254097, rend_intergenic: 235847 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 259488, rend_intergenic: 256370 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 261180, rend_intergenic: 259488 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 271909, rend_intergenic: 261195 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 274983, rend_intergenic: 272865 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -building DP trellis -building trellis in range 1 - 279034 -exon list size: 1144 building trellis 0.1 0.2 0.3 0.3 0.4 0.5 0.6 0.7 0.8 0.9 1.0 1.0 1.1 1.2 1.3 1.4 1.5 1.6 1.7 1.7 1.8 1.9 2.0 2.1 2.2 2.3 2.4 2.4 2.5 2.6 2.7 2.8 2.9 3.0 3.1 3.1 3.2 3.3 3.4 3.5 3.6 3.7 3.8 3.8 3.9 4.0 4.1 4.2 4.3 4.4 4.5 4.5 4.6 4.7 4.8 4.9 5.0 5.1 5.1 5.2 5.3 5.4 5.5 5.6 5.7 5.8 5.8 5.9 6.0 6.1 6.2 6.3 6.4 6.5 6.5 6.6 6.7 6.8 6.9 7.0 7.1 7.2 7.2 7.3 7.4 7.5 7.6 7.7 7.8 7.9 7.9 8.0 8.1 8.2 8.3 8.4 8.5 8.6 8.6 8.7 8.8 8.9 9.0 9.1 9.2 9.2 9.3 9.4 9.5 9.6 9.7 9.8 9.9 9.9 10.0 10.1 10.2 10.3 10.4 10.5 10.6 10.6 10.7 10.8 10.9 11.0 11.1 11.2 11.3 11.3 11.4 11.5 11.6 11.7 11.8 11.9 12.0 12.0 12.1 12.2 12.3 12.4 12.5 12.6 12.7 12.7 12.8 12.9 13.0 13.1 13.2 13.3 13.4 13.4 13.5 13.6 13.7 13.8 13.9 14.0 14.0 14.1 14.2 14.3 14.4 14.5 14.6 14.7 14.7 14.8 14.9 15.0 15.1 15.2 15.3 15.4 15.4 15.5 15.6 15.7 15.8 15.9 16.0 16.1 16.1 16.2 16.3 16.4 16.5 16.6 16.7 16.8 16.8 16.9 17.0 17.1 17.2 17.3 17.4 17.5 17.5 17.6 17.7 17.8 17.9 18.0 18.1 18.2 18.2 18.3 18.4 18.5 18.6 18.7 18.8 18.8 18.9 19.0 19.1 19.2 19.3 19.4 19.5 19.5 19.6 19.7 19.8 19.9 20.0 20.1 20.2 20.2 20.3 20.4 20.5 20.6 20.7 20.8 20.9 20.9 21.0 21.1 21.2 21.3 21.4 21.5 21.6 21.6 21.7 21.8 21.9 22.0 22.1 22.2 22.3 22.3 22.4 22.5 22.6 22.7 22.8 22.9 22.9 23.0 23.1 23.2 23.3 23.4 23.5 23.6 23.6 23.7 23.8 23.9 24.0 24.1 24.2 24.3 24.3 24.4 24.5 24.6 24.7 24.8 24.9 25.0 25.0 25.1 25.2 25.3 25.4 25.5 25.6 25.7 25.7 25.8 25.9 26.0 26.1 26.2 26.3 26.4 26.4 26.5 26.6 26.7 26.8 26.9 27.0 27.1 27.1 27.2 27.3 27.4 27.5 27.6 27.7 27.7 27.8 27.9 28.0 28.1 28.2 28.3 28.4 28.4 28.5 28.6 28.7 28.8 28.9 29.0 29.1 29.1 29.2 29.3 29.4 29.5 29.6 29.7 29.8 29.8 29.9 30.0 30.1 30.2 30.3 30.4 30.5 30.5 30.6 30.7 30.8 30.9 31.0 31.1 31.2 31.2 31.3 31.4 31.5 31.6 31.7 31.8 31.8 31.9 32.0 32.1 32.2 32.3 32.4 32.5 32.5 32.6 32.7 32.8 32.9 33.0 33.1 33.2 33.2 33.3 33.4 33.5 33.6 33.7 33.8 33.9 33.9 34.0 34.1 34.2 34.3 34.4 34.5 34.6 34.6 34.7 34.8 34.9 35.0 35.1 35.2 35.3 35.3 35.4 35.5 35.6 35.7 35.8 35.9 36.0 36.0 36.1 36.2 36.3 36.4 36.5 36.6 36.6 36.7 36.8 36.9 37.0 37.1 37.2 37.3 37.3 37.4 37.5 37.6 37.7 37.8 37.9 38.0 38.0 38.1 38.2 38.3 38.4 38.5 38.6 38.7 38.7 38.8 38.9 39.0 39.1 39.2 39.3 39.4 39.4 39.5 39.6 39.7 39.8 39.9 40.0 40.1 40.1 40.2 40.3 40.4 40.5 40.6 40.7 40.8 40.8 40.9 41.0 41.1 41.2 41.3 41.4 41.4 41.5 41.6 41.7 41.8 41.9 42.0 42.1 42.1 42.2 42.3 42.4 42.5 42.6 42.7 42.8 42.8 42.9 43.0 43.1 43.2 43.3 43.4 43.5 43.5 43.6 43.7 43.8 43.9 44.0 44.1 44.2 44.2 44.3 44.4 44.5 44.6 44.7 44.8 44.9 44.9 45.0 45.1 45.2 45.3 45.4 45.5 45.5 45.6 45.7 45.8 45.9 46.0 46.1 46.2 46.2 46.3 46.4 46.5 46.6 46.7 46.8 46.9 46.9 47.0 47.1 47.2 47.3 47.4 47.5 47.6 47.6 47.7 47.8 47.9 48.0 48.1 48.2 48.3 48.3 48.4 48.5 48.6 48.7 48.8 48.9 49.0 49.0 49.1 49.2 49.3 49.4 49.5 49.6 49.7 49.7 49.8 49.9 50.0 50.1 50.2 50.3 50.3 50.4 50.5 50.6 50.7 50.8 50.9 51.0 51.0 51.1 51.2 51.3 51.4 51.5 51.6 51.7 51.7 51.8 51.9 52.0 52.1 52.2 52.3 52.4 52.4 52.5 52.6 52.7 52.8 52.9 53.0 53.1 53.1 53.2 53.3 53.4 53.5 53.6 53.7 53.8 53.8 53.9 54.0 54.1 54.2 54.3 54.4 54.5 54.5 54.6 54.7 54.8 54.9 55.0 55.1 55.1 55.2 55.3 55.4 55.5 55.6 55.7 55.8 55.8 55.9 56.0 56.1 56.2 56.3 56.4 56.5 56.5 56.6 56.7 56.8 56.9 57.0 57.1 57.2 57.2 57.3 57.4 57.5 57.6 57.7 57.8 57.9 57.9 58.0 58.1 58.2 58.3 58.4 58.5 58.6 58.6 58.7 58.8 58.9 59.0 59.1 59.2 59.2 59.3 59.4 59.5 59.6 59.7 59.8 59.9 59.9 60.0 60.1 60.2 60.3 60.4 60.5 60.6 60.6 60.7 60.8 60.9 61.0 61.1 61.2 61.3 61.3 61.4 61.5 61.6 61.7 61.8 61.9 62.0 62.0 62.1 62.2 62.3 62.4 62.5 62.6 62.7 62.7 62.8 62.9 63.0 63.1 63.2 63.3 63.4 63.4 63.5 63.6 63.7 63.8 63.9 64.0 64.0 64.1 64.2 64.3 64.4 64.5 64.6 64.7 64.7 64.8 64.9 65.0 65.1 65.2 65.3 65.4 65.4 65.5 65.6 65.7 65.8 65.9 66.0 66.1 66.1 66.2 66.3 66.4 66.5 66.6 66.7 66.8 66.8 66.9 67.0 67.1 67.2 67.3 67.4 67.5 67.5 67.6 67.7 67.8 67.9 68.0 68.1 68.2 68.2 68.3 68.4 68.5 68.6 68.7 68.8 68.8 68.9 69.0 69.1 69.2 69.3 69.4 69.5 69.5 69.6 69.7 69.8 69.9 70.0 70.1 70.2 70.2 70.3 70.4 70.5 70.6 70.7 70.8 70.9 70.9 71.0 71.1 71.2 71.3 71.4 71.5 71.6 71.6 71.7 71.8 71.9 72.0 72.1 72.2 72.3 72.3 72.4 72.5 72.6 72.7 72.8 72.9 72.9 73.0 73.1 73.2 73.3 73.4 73.5 73.6 73.6 73.7 73.8 73.9 74.0 74.1 74.2 74.3 74.3 74.4 74.5 74.6 74.7 74.8 74.9 75.0 75.0 75.1 75.2 75.3 75.4 75.5 75.6 75.7 75.7 75.8 75.9 76.0 76.1 76.2 76.3 76.4 76.4 76.5 76.6 76.7 76.8 76.9 77.0 77.1 77.1 77.2 77.3 77.4 77.5 77.6 77.7 77.7 77.8 77.9 78.0 78.1 78.2 78.3 78.4 78.4 78.5 78.6 78.7 78.8 78.9 79.0 79.1 79.1 79.2 79.3 79.4 79.5 79.6 79.7 79.8 79.8 79.9 80.0 80.1 80.2 80.3 80.4 80.5 80.5 80.6 80.7 80.8 80.9 81.0 81.1 81.2 81.2 81.3 81.4 81.5 81.6 81.7 81.8 81.8 81.9 82.0 82.1 82.2 82.3 82.4 82.5 82.5 82.6 82.7 82.8 82.9 83.0 83.1 83.2 83.2 83.3 83.4 83.5 83.6 83.7 83.8 83.9 83.9 84.0 84.1 84.2 84.3 84.4 84.5 84.6 84.6 84.7 84.8 84.9 85.0 85.1 85.2 85.3 85.3 85.4 85.5 85.6 85.7 85.8 85.9 86.0 86.0 86.1 86.2 86.3 86.4 86.5 86.6 86.6 86.7 86.8 86.9 87.0 87.1 87.2 87.3 87.3 87.4 87.5 87.6 87.7 87.8 87.9 88.0 88.0 88.1 88.2 88.3 88.4 88.5 88.6 88.7 88.7 88.8 88.9 89.0 89.1 89.2 89.3 89.4 89.4 89.5 89.6 89.7 89.8 89.9 90.0 90.1 90.1 90.2 90.3 90.4 90.5 90.6 90.7 90.8 90.8 90.9 91.0 91.1 91.2 91.3 91.4 91.4 91.5 91.6 91.7 91.8 91.9 92.0 92.1 92.1 92.2 92.3 92.4 92.5 92.6 92.7 92.8 92.8 92.9 93.0 93.1 93.2 93.3 93.4 93.5 93.5 93.6 93.7 93.8 93.9 94.0 94.1 94.2 94.2 94.3 94.4 94.5 94.6 94.7 94.8 94.9 94.9 95.0 95.1 95.2 95.3 95.4 95.5 95.5 95.6 95.7 95.8 95.9 96.0 96.1 96.2 96.2 96.3 96.4 96.5 96.6 96.7 96.8 96.9 96.9 97.0 97.1 97.2 97.3 97.4 97.5 97.6 97.6 97.7 97.8 97.9 98.0 98.1 98.2 98.3 98.3 98.4 98.5 98.6 98.7 98.8 98.9 99.0 99.0 99.1 99.2 99.3 99.4 99.5 99.6 99.7 99.7 99.8 99.9 -found 49 predictions from path traversal Error with prediction: snap lend_intergenic: 39917, rend_intergenic: 36855 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 46838, rend_intergenic: 45890 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 56897, rend_intergenic: 54524 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 71884, rend_intergenic: 64810 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 84203, rend_intergenic: 77818 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 90865, rend_intergenic: 84988 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 99605, rend_intergenic: 93634 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 100936, rend_intergenic: 100764 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 103656, rend_intergenic: 101504 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 106549, rend_intergenic: 104710 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 112993, rend_intergenic: 107139 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 119746, rend_intergenic: 114885 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 131610, rend_intergenic: 121203 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 149535, rend_intergenic: 132311 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 149825, rend_intergenic: 149740 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 163204, rend_intergenic: 150463 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 179139, rend_intergenic: 174466 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 182656, rend_intergenic: 179248 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 220472, rend_intergenic: 187967 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 254097, rend_intergenic: 235847 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 259488, rend_intergenic: 256370 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 261180, rend_intergenic: 259488 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 271909, rend_intergenic: 261195 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 274983, rend_intergenic: 272865 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -reporting highest scoring path thru the trellis. -found 24 predictions persist after filtering for low support