-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_15/scaffold_15_2916449-3174630 -reading genomic sequence. ** Processing features (+) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: +) -loading gene prediction evidence. (strand: +)Valid prediction for snap_scaffold_15-snap.668-T1 Valid prediction for GeneMark_model.62939_t Valid prediction for Augustus_model.g24567.t1 Valid prediction for GlimmerHMM_glimmerT_36594-T1 Valid prediction for GeneMark_model.62930_t Valid prediction for GeneMark_model.62999_t Valid prediction for GeneMark_model.62974_t Valid prediction for GlimmerHMM_glimmerT_36602-T1 Valid prediction for GeneMark_model.62962_t Valid prediction for Augustus_model.g24574.t1 Valid prediction for GlimmerHMM_glimmerT_36581-T1 Valid prediction for snap_scaffold_15-snap.689-T1 Valid prediction for GeneMark_model.62986_t Valid prediction for snap_scaffold_15-snap.635-T1 Valid prediction for GeneMark_model.62957_t Valid prediction for snap_scaffold_15-snap.656-T1 Valid prediction for GeneMark_model.62941_t Valid prediction for snap_scaffold_15-snap.691-T1 Valid prediction for snap_scaffold_15-snap.645-T1 Valid prediction for GeneMark_model.62932_t Valid prediction for GeneMark_model.62955_t Valid prediction for GeneMark_model.62982_t Valid prediction for snap_scaffold_15-snap.670-T1 Valid prediction for snap_scaffold_15-snap.682-T1 Valid prediction for GeneMark_model.62935_t Valid prediction for CodingQuarry_transcript_17906-T1 Couldn't classify 172406, 172411 Sorry, prediction GeneMark_model.62975_t fails validation. (AGT) AG 172406-172411 GT GAG (AGA) AG 172437-172514 GC GAG (AGG) AG 172538-172624 GT AGG (TCC) AG 172729-172758 GT GTG (GAC) AG 172977-173105 GT AAG (AGA) AG 173131-173190 GT AGG (AAT) AG 174831-174854 GT AGG (GAG) AG 174882-174968 GT ATG (AGA) AG 175055-175177 GT GGG (AGA) AG 175208-175213 GT GGG (AGG) AG 175247-175326 GT AGG (TGC) AG 175615-175646 CA AGC -recovered GeneMark_model.62975_t, terminal, 175615, 175646 -recovered GeneMark_model.62975_t, internal, 172406, 172411 -recovered GeneMark_model.62975_t, internal, 172437, 172514 -recovered GeneMark_model.62975_t, internal, 172538, 172624 -recovered GeneMark_model.62975_t, internal, 172729, 172758 -recovered GeneMark_model.62975_t, internal, 172977, 173105 -recovered GeneMark_model.62975_t, internal, 173131, 173190 -recovered GeneMark_model.62975_t, internal, 174831, 174854 -recovered GeneMark_model.62975_t, internal, 174882, 174968 -recovered GeneMark_model.62975_t, internal, 175055, 175177 -recovered GeneMark_model.62975_t, internal, 175208, 175213 -recovered GeneMark_model.62975_t, internal, 175247, 175326 Valid prediction for GeneMark_model.62968_t Valid prediction for snap_scaffold_15-snap.674-T1 Sorry, intron length (8) is less than minimum required (10) Valid prediction for GlimmerHMM_glimmerT_36584-T1 Valid prediction for GeneMark_model.62946_t Valid prediction for GeneMark_model.62965_t Valid prediction for GeneMark_model.62972_t Valid prediction for snap_scaffold_15-snap.677-T1 Valid prediction for Augustus_model.g24575.t1 Valid prediction for snap_scaffold_15-snap.687-T1 Valid prediction for snap_scaffold_15-snap.637-T1 Valid prediction for Augustus_model.g24579.t1 Valid prediction for GeneMark_model.62960_t Valid prediction for snap_scaffold_15-snap.639-T1 Valid prediction for GeneMark_model.62997_t Valid prediction for GlimmerHMM_glimmerT_36593-T1 Valid prediction for GlimmerHMM_glimmerT_36590-T1 Valid prediction for GlimmerHMM_glimmerT_36591-T1 Valid prediction for GeneMark_model.62991_t Valid prediction for snap_scaffold_15-snap.654-T1 Valid prediction for snap_scaffold_15-snap.647-T1 Valid prediction for pasa_asmbl_14035.p1 Valid prediction for GeneMark_model.62951_t Valid prediction for GeneMark_model.62948_t Valid prediction for snap_scaffold_15-snap.684-T1 Valid prediction for snap_scaffold_15-snap.644-T1 Valid prediction for GeneMark_model.62979_t Valid prediction for GeneMark_model.62981_t Valid prediction for GlimmerHMM_glimmerT_36586-T1 Valid prediction for GeneMark_model.62937_t Valid prediction for snap_scaffold_15-snap.666-T1 Valid prediction for snap_scaffold_15-snap.676-T1 Valid prediction for GeneMark_model.62959_t Valid prediction for GeneMark_model.62964_t Valid prediction for snap_scaffold_15-snap.651-T1 Valid prediction for snap_scaffold_15-snap.661-T1 Valid prediction for snap_scaffold_15-snap.642-T1 Valid prediction for GeneMark_model.62988_t Valid prediction for GeneMark_model.62990_t Valid prediction for snap_scaffold_15-snap.659-T1 Valid prediction for snap_scaffold_15-snap.686-T1 Valid prediction for GeneMark_model.62944_t Valid prediction for snap_scaffold_15-snap.679-T1 Valid prediction for GeneMark_model.62984_t Valid prediction for GlimmerHMM_glimmerT_36604-T1 Valid prediction for GeneMark_model.62950_t Valid prediction for GeneMark_model.62995_t Valid prediction for GlimmerHMM_glimmerT_36596-T1 Valid prediction for GlimmerHMM_glimmerT_36582-T1 Valid prediction for GeneMark_model.62977_t Valid prediction for HiQ_model.g24568.t1 Valid prediction for snap_scaffold_15-snap.657-T1 Valid prediction for snap_scaffold_15-snap.688-T1 Valid prediction for pasa_asmbl_14027.p1 Valid prediction for GeneMark_model.62993_t Valid prediction for Augustus_model.g24580.t1 Valid prediction for GeneMark_model.62970_t Valid prediction for GlimmerHMM_glimmerT_36580-T1 Valid prediction for snap_scaffold_15-snap.669-T1 Valid prediction for snap_scaffold_15-snap.662-T1 Valid prediction for GeneMark_model.62966_t Valid prediction for GeneMark_model.62927_t Valid prediction for GeneMark_model.62953_t Valid prediction for snap_scaffold_15-snap.672-T1 -loading the search evidence (protein and EST search results, strand: +) -scoring exons (strand: +) ** Processing features (-) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: -) -loading gene prediction evidence. (strand: -)Valid prediction for snap_scaffold_15-snap.667-T1 Sorry, intron length (7) is less than minimum required (10) Valid prediction for GeneMark_model.62956_t Valid prediction for snap_scaffold_15-snap.655-T1 Valid prediction for GlimmerHMM_glimmerT_36588-T1 Valid prediction for Augustus_model.g24571.t1 Valid prediction for snap_scaffold_15-snap.673-T1 Valid prediction for snap_scaffold_15-snap.685-T1 Valid prediction for GlimmerHMM_glimmerT_36600-T1 Valid prediction for GeneMark_model.62983_t Couldn't classify 29952, 30066 Sorry, prediction pasa_asmbl_15085.p1 fails validation. (GGC) CC 29952-30066 GT AGG (CCT) AG 30236-30396 GT AGG (GAG) AG 30501-30617 GT AGG (CCA) AG 30709-30804 GG GAG -recovered pasa_asmbl_15085.p1, terminal, 30709, 30804 -recovered pasa_asmbl_15085.p1, internal, 30236, 30396 -recovered pasa_asmbl_15085.p1, internal, 30501, 30617 Valid prediction for Augustus_model.g24565.t1 Valid prediction for snap_scaffold_15-snap.653-T1 Valid prediction for GeneMark_model.62942_t Couldn't classify 18450, 18532 Couldn't classify 21825, 22036 Sorry, prediction pasa_asmbl_15090.p1 fails validation. (CGC) CT 18450-18532 GT AGG (GAG) AG 18803-18902 GT AGG (GTC) AG 19051-19185 GT AGG (GGC) AG 19388-19491 GT AGG (TGA) AG 19777-19984 GT AGG (AGG) AG 20061-20171 GT AGG (GTG) AG 20315-20422 GT GGG (GAG) AG 20554-20678 GT AAG (GTA) AG 20870-20952 GT AGG (GAG) AG 21265-21376 GT TGG (CTG) AG 21584-21645 GT GGG (CAG) AG 21825-22036 TG ACT add_exon() Sorry, pasa_asmbl_15090.p1 20870-20952-terminal-2 is invalid. -recovered pasa_asmbl_15090.p1, terminal, 20870, 20952 -recovered pasa_asmbl_15090.p1, internal, 18803, 18902 -recovered pasa_asmbl_15090.p1, internal, 19051, 19185 -recovered pasa_asmbl_15090.p1, internal, 19388, 19491 -recovered pasa_asmbl_15090.p1, internal, 19777, 19984 -recovered pasa_asmbl_15090.p1, internal, 20061, 20171 -recovered pasa_asmbl_15090.p1, internal, 20315, 20422 -recovered pasa_asmbl_15090.p1, internal, 20554, 20678 -recovered pasa_asmbl_15090.p1, internal, 20870, 20952 -recovered pasa_asmbl_15090.p1, internal, 21265, 21376 -recovered pasa_asmbl_15090.p1, internal, 21584, 21645 Valid prediction for snap_scaffold_15-snap.675-T1 Valid prediction for GeneMark_model.62931_t Valid prediction for snap_scaffold_15-snap.646-T1 Valid prediction for snap_scaffold_15-snap.680-T1 Couldn't classify 25155, 25188 Sorry, prediction pasa_asmbl_15087.p1 fails validation. (CAC) CA 25155-25188 GT AGG (ATC) AG 25319-25474 GT TGG (CCT) AG 25566-26278 CG AAC -recovered pasa_asmbl_15087.p1, terminal, 25566, 26278 -recovered pasa_asmbl_15087.p1, internal, 25319, 25474 Valid prediction for snap_scaffold_15-snap.641-T1 Valid prediction for snap_scaffold_15-snap.665-T1 Valid prediction for GeneMark_model.62949_t Valid prediction for snap_scaffold_15-snap.658-T1 Couldn't classify 146912, 148888 Sorry, prediction pasa_asmbl_15082.p1 fails validation. (GAA) AA 146912-148888 CA GAC Valid prediction for GeneMark_model.62992_t Couldn't classify 14718, 14762 Couldn't classify 16841, 16951 Sorry, prediction pasa_asmbl_15092.p1 fails validation. (AAG) TG 14718-14762 GT TGG (GGT) AG 14863-14997 GT TGG (ATT) AG 15988-16116 GT AGG (ATT) AG 16841-16951 TT CCT -recovered pasa_asmbl_15092.p1, internal, 14863, 14997 -recovered pasa_asmbl_15092.p1, internal, 15988, 16116 Valid prediction for Augustus_model.g24576.t1 Valid prediction for GeneMark_model.63000_t Valid prediction for GeneMark_model.62928_t Valid prediction for GeneMark_model.62936_t Valid prediction for GeneMark_model.62989_t Valid prediction for snap_scaffold_15-snap.660-T1 Valid prediction for GeneMark_model.62985_t Couldn't classify 24208, 24330 Couldn't classify 24938, 24953 Sorry, prediction pasa_asmbl_15088.p1 fails validation. (GAC) TG 24208-24330 GT GGG (ATC) AG 24558-24766 GT AGG (TCC) AG 24938-24953 CG AGC -recovered pasa_asmbl_15088.p1, internal, 24558, 24766 Valid prediction for Augustus_model.g24570.t1 Valid prediction for GeneMark_model.62971_t Valid prediction for GeneMark_model.62943_t Valid prediction for Augustus_model.g24577.t1 Valid prediction for snap_scaffold_15-snap.640-T1 Valid prediction for snap_scaffold_15-snap.652-T1 Valid prediction for GeneMark_model.62947_t Valid prediction for snap_scaffold_15-snap.650-T1 Valid prediction for GeneMark_model.62973_t Valid prediction for Augustus_model.g24569.t1 Valid prediction for GlimmerHMM_glimmerT_36603-T1 Valid prediction for GeneMark_model.62958_t Valid prediction for GlimmerHMM_glimmerT_36601-T1 Valid prediction for GeneMark_model.62987_t Couldn't classify 18450, 18532 Couldn't classify 23597, 23644 Sorry, prediction pasa_asmbl_15089.p1 fails validation. (CGC) CT 18450-18532 GT AGG (GAG) AG 18803-18902 GT AGG (GTC) AG 19051-19185 GT AGG (GGC) AG 19388-19491 GT AGG (TGA) AG 19777-19984 GT AGG (AGG) AG 20061-20171 GT AGG (GTG) AG 20315-20422 GT GGG (GAG) AG 20554-20678 GT AAG (GTA) AG 20870-20952 GT AGG (GAG) AG 21265-21376 GT TGG (CTG) AG 21584-21645 GT GGG (CAG) AG 21825-21980 GT AGG (ATG) AG 22478-22598 GC AGG (ACG) AG 22959-23084 GT AAG (GGA) AG 23228-23303 GT AGG (GAT) AG 23448-23513 GT AAG (ACG) AG 23597-23644 GA ACG add_exon() Sorry, pasa_asmbl_15089.p1 22478-22598-initial-1 is invalid. -recovered pasa_asmbl_15089.p1, initial, 22478, 22598 add_exon() Sorry, pasa_asmbl_15089.p1 20870-20952-terminal-2 is invalid. -recovered pasa_asmbl_15089.p1, terminal, 20870, 20952 add_exon() Sorry, pasa_asmbl_15089.p1 21825-21980-terminal-1 is invalid. -recovered pasa_asmbl_15089.p1, terminal, 21825, 21980 -recovered pasa_asmbl_15089.p1, internal, 18803, 18902 -recovered pasa_asmbl_15089.p1, internal, 19051, 19185 -recovered pasa_asmbl_15089.p1, internal, 19388, 19491 -recovered pasa_asmbl_15089.p1, internal, 19777, 19984 -recovered pasa_asmbl_15089.p1, internal, 20061, 20171 -recovered pasa_asmbl_15089.p1, internal, 20315, 20422 -recovered pasa_asmbl_15089.p1, internal, 20554, 20678 -recovered pasa_asmbl_15089.p1, internal, 20870, 20952 -recovered pasa_asmbl_15089.p1, internal, 21265, 21376 -recovered pasa_asmbl_15089.p1, internal, 21584, 21645 -recovered pasa_asmbl_15089.p1, internal, 21825, 21980 -recovered pasa_asmbl_15089.p1, internal, 22478, 22598 -recovered pasa_asmbl_15089.p1, internal, 22959, 23084 -recovered pasa_asmbl_15089.p1, internal, 23228, 23303 -recovered pasa_asmbl_15089.p1, internal, 23448, 23513 Valid prediction for GlimmerHMM_glimmerT_36585-T1 Valid prediction for GlimmerHMM_glimmerT_36587-T1 Valid prediction for GeneMark_model.62945_t Valid prediction for snap_scaffold_15-snap.683-T1 Valid prediction for snap_scaffold_15-snap.643-T1 Valid prediction for snap_scaffold_15-snap.638-T1 Valid prediction for GeneMark_model.62998_t Valid prediction for GeneMark_model.62940_t Valid prediction for GlimmerHMM_glimmerT_36599-T1 Valid prediction for Augustus_model.g24581.t1 Valid prediction for snap_scaffold_15-snap.678-T1 Valid prediction for GlimmerHMM_glimmerT_36595-T1 Valid prediction for GeneMark_model.62978_t Valid prediction for snap_scaffold_15-snap.692-T1 Valid prediction for GlimmerHMM_glimmerT_36598-T1 Valid prediction for GeneMark_model.62976_t Valid prediction for GeneMark_model.62996_t Valid prediction for Augustus_model.g24573.t1 Valid prediction for GeneMark_model.62961_t Valid prediction for snap_scaffold_15-snap.663-T1 Valid prediction for Augustus_model.g24582.t1 Couldn't classify 189194, 189263 Sorry, prediction pasa_asmbl_15077.p1 fails validation. (ATG) GA 184500-184600 GT AAG (TGA) AG 184741-184847 GT AGG (GTT) AG 184954-185050 GT AGG (TGC) AG 185662-185757 GT AAG (CAT) AG 185876-185948 GT AGG (GAA) AG 186308-186413 GT AGG (TGA) AG 186878-186967 GT TGG (ACC) AG 187147-187232 GT ACG (GCT) AG 187726-187807 GT ATG (GCT) AG 188331-188481 GT ATG (ATA) AG 189194-189263 AT CAA -recovered pasa_asmbl_15077.p1, initial, 184500, 184600 -recovered pasa_asmbl_15077.p1, internal, 184741, 184847 -recovered pasa_asmbl_15077.p1, internal, 184954, 185050 -recovered pasa_asmbl_15077.p1, internal, 185662, 185757 -recovered pasa_asmbl_15077.p1, internal, 185876, 185948 -recovered pasa_asmbl_15077.p1, internal, 186308, 186413 -recovered pasa_asmbl_15077.p1, internal, 186878, 186967 -recovered pasa_asmbl_15077.p1, internal, 187147, 187232 -recovered pasa_asmbl_15077.p1, internal, 187726, 187807 -recovered pasa_asmbl_15077.p1, internal, 188331, 188481 Valid prediction for GeneMark_model.62952_t Valid prediction for GlimmerHMM_glimmerT_36592-T1 Valid prediction for GlimmerHMM_glimmerT_36583-T1 Valid prediction for snap_scaffold_15-snap.690-T1 Couldn't classify 145499, 146680 Sorry, prediction pasa_asmbl_15083.p1 fails validation. (CCG) GC 145499-146680 AT TCA Valid prediction for snap_scaffold_15-snap.664-T1 Valid prediction for GeneMark_model.62963_t Valid prediction for snap_scaffold_15-snap.648-T1 Valid prediction for GeneMark_model.62929_t Valid prediction for GeneMark_model.62933_t Valid prediction for snap_scaffold_15-snap.671-T1 Valid prediction for Augustus_model.g24566.t1 Valid prediction for Augustus_model.g24572.t1 Valid prediction for snap_scaffold_15-snap.681-T1 Valid prediction for Augustus_model.g24578.t1 Valid prediction for CodingQuarry_transcript_17907-T1 Valid prediction for GlimmerHMM_glimmerT_36597-T1 Valid prediction for GeneMark_model.62994_t Valid prediction for GeneMark_model.62980_t Valid prediction for GeneMark_model.62967_t Valid prediction for GlimmerHMM_glimmerT_36605-T1 Valid prediction for snap_scaffold_15-snap.649-T1 Valid prediction for snap_scaffold_15-snap.636-T1 Valid prediction for GeneMark_model.62938_t Valid prediction for GlimmerHMM_glimmerT_36589-T1 Valid prediction for GeneMark_model.62954_t Valid prediction for CodingQuarry_transcript_17909-T1 -loading the search evidence (protein and EST search results, strand: -) -scoring exons (strand: -)Error with prediction: snap lend_intergenic: 3605, rend_intergenic: 1509 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 4291, rend_intergenic: 3810 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 11549, rend_intergenic: 5370 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 21224, rend_intergenic: 12479 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 28761, rend_intergenic: 23162 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 32603, rend_intergenic: 30190 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 41043, rend_intergenic: 38879 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 43035, rend_intergenic: 41158 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 61918, rend_intergenic: 49736 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 73408, rend_intergenic: 67596 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 87379, rend_intergenic: 83899 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 110840, rend_intergenic: 106547 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 118812, rend_intergenic: 113739 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 119142, rend_intergenic: 119048 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 136419, rend_intergenic: 120531 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 142233, rend_intergenic: 138860 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 145883, rend_intergenic: 143688 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 153819, rend_intergenic: 146690 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 159385, rend_intergenic: 153824 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 183265, rend_intergenic: 159701 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 187458, rend_intergenic: 183324 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 192778, rend_intergenic: 187550 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 202642, rend_intergenic: 193923 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 213856, rend_intergenic: 207568 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 223532, rend_intergenic: 214008 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 249330, rend_intergenic: 229749 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -building DP trellis -building trellis in range 1 - 258182 -exon list size: 1128 building trellis 0.1 0.2 0.3 0.4 0.4 0.5 0.6 0.7 0.8 0.9 1.0 1.1 1.2 1.2 1.3 1.4 1.5 1.6 1.7 1.8 1.9 1.9 2.0 2.1 2.2 2.3 2.4 2.5 2.6 2.7 2.7 2.8 2.9 3.0 3.1 3.2 3.3 3.4 3.5 3.5 3.6 3.7 3.8 3.9 4.0 4.1 4.2 4.2 4.3 4.4 4.5 4.6 4.7 4.8 4.9 5.0 5.0 5.1 5.2 5.3 5.4 5.5 5.6 5.7 5.8 5.8 5.9 6.0 6.1 6.2 6.3 6.4 6.5 6.5 6.6 6.7 6.8 6.9 7.0 7.1 7.2 7.3 7.3 7.4 7.5 7.6 7.7 7.8 7.9 8.0 8.1 8.1 8.2 8.3 8.4 8.5 8.6 8.7 8.8 8.8 8.9 9.0 9.1 9.2 9.3 9.4 9.5 9.6 9.6 9.7 9.8 9.9 10.0 10.1 10.2 10.3 10.4 10.4 10.5 10.6 10.7 10.8 10.9 11.0 11.1 11.2 11.2 11.3 11.4 11.5 11.6 11.7 11.8 11.9 11.9 12.0 12.1 12.2 12.3 12.4 12.5 12.6 12.7 12.7 12.8 12.9 13.0 13.1 13.2 13.3 13.4 13.5 13.5 13.6 13.7 13.8 13.9 14.0 14.1 14.2 14.2 14.3 14.4 14.5 14.6 14.7 14.8 14.9 15.0 15.0 15.1 15.2 15.3 15.4 15.5 15.6 15.7 15.8 15.8 15.9 16.0 16.1 16.2 16.3 16.4 16.5 16.5 16.6 16.7 16.8 16.9 17.0 17.1 17.2 17.3 17.3 17.4 17.5 17.6 17.7 17.8 17.9 18.0 18.1 18.1 18.2 18.3 18.4 18.5 18.6 18.7 18.8 18.8 18.9 19.0 19.1 19.2 19.3 19.4 19.5 19.6 19.6 19.7 19.8 19.9 20.0 20.1 20.2 20.3 20.4 20.4 20.5 20.6 20.7 20.8 20.9 21.0 21.1 21.2 21.2 21.3 21.4 21.5 21.6 21.7 21.8 21.9 21.9 22.0 22.1 22.2 22.3 22.4 22.5 22.6 22.7 22.7 22.8 22.9 23.0 23.1 23.2 23.3 23.4 23.5 23.5 23.6 23.7 23.8 23.9 24.0 24.1 24.2 24.2 24.3 24.4 24.5 24.6 24.7 24.8 24.9 25.0 25.0 25.1 25.2 25.3 25.4 25.5 25.6 25.7 25.8 25.8 25.9 26.0 26.1 26.2 26.3 26.4 26.5 26.5 26.6 26.7 26.8 26.9 27.0 27.1 27.2 27.3 27.3 27.4 27.5 27.6 27.7 27.8 27.9 28.0 28.1 28.1 28.2 28.3 28.4 28.5 28.6 28.7 28.8 28.8 28.9 29.0 29.1 29.2 29.3 29.4 29.5 29.6 29.6 29.7 29.8 29.9 30.0 30.1 30.2 30.3 30.4 30.4 30.5 30.6 30.7 30.8 30.9 31.0 31.1 31.2 31.2 31.3 31.4 31.5 31.6 31.7 31.8 31.9 31.9 32.0 32.1 32.2 32.3 32.4 32.5 32.6 32.7 32.7 32.8 32.9 33.0 33.1 33.2 33.3 33.4 33.5 33.5 33.6 33.7 33.8 33.9 34.0 34.1 34.2 34.2 34.3 34.4 34.5 34.6 34.7 34.8 34.9 35.0 35.0 35.1 35.2 35.3 35.4 35.5 35.6 35.7 35.8 35.8 35.9 36.0 36.1 36.2 36.3 36.4 36.5 36.5 36.6 36.7 36.8 36.9 37.0 37.1 37.2 37.3 37.3 37.4 37.5 37.6 37.7 37.8 37.9 38.0 38.1 38.1 38.2 38.3 38.4 38.5 38.6 38.7 38.8 38.8 38.9 39.0 39.1 39.2 39.3 39.4 39.5 39.6 39.6 39.7 39.8 39.9 40.0 40.1 40.2 40.3 40.4 40.4 40.5 40.6 40.7 40.8 40.9 41.0 41.1 41.2 41.2 41.3 41.4 41.5 41.6 41.7 41.8 41.9 41.9 42.0 42.1 42.2 42.3 42.4 42.5 42.6 42.7 42.7 42.8 42.9 43.0 43.1 43.2 43.3 43.4 43.5 43.5 43.6 43.7 43.8 43.9 44.0 44.1 44.2 44.2 44.3 44.4 44.5 44.6 44.7 44.8 44.9 45.0 45.0 45.1 45.2 45.3 45.4 45.5 45.6 45.7 45.8 45.8 45.9 46.0 46.1 46.2 46.3 46.4 46.5 46.5 46.6 46.7 46.8 46.9 47.0 47.1 47.2 47.3 47.3 47.4 47.5 47.6 47.7 47.8 47.9 48.0 48.1 48.1 48.2 48.3 48.4 48.5 48.6 48.7 48.8 48.8 48.9 49.0 49.1 49.2 49.3 49.4 49.5 49.6 49.6 49.7 49.8 49.9 50.0 50.1 50.2 50.3 50.4 50.4 50.5 50.6 50.7 50.8 50.9 51.0 51.1 51.2 51.2 51.3 51.4 51.5 51.6 51.7 51.8 51.9 51.9 52.0 52.1 52.2 52.3 52.4 52.5 52.6 52.7 52.7 52.8 52.9 53.0 53.1 53.2 53.3 53.4 53.5 53.5 53.6 53.7 53.8 53.9 54.0 54.1 54.2 54.2 54.3 54.4 54.5 54.6 54.7 54.8 54.9 55.0 55.0 55.1 55.2 55.3 55.4 55.5 55.6 55.7 55.8 55.8 55.9 56.0 56.1 56.2 56.3 56.4 56.5 56.5 56.6 56.7 56.8 56.9 57.0 57.1 57.2 57.3 57.3 57.4 57.5 57.6 57.7 57.8 57.9 58.0 58.1 58.1 58.2 58.3 58.4 58.5 58.6 58.7 58.8 58.8 58.9 59.0 59.1 59.2 59.3 59.4 59.5 59.6 59.6 59.7 59.8 59.9 60.0 60.1 60.2 60.3 60.4 60.4 60.5 60.6 60.7 60.8 60.9 61.0 61.1 61.2 61.2 61.3 61.4 61.5 61.6 61.7 61.8 61.9 61.9 62.0 62.1 62.2 62.3 62.4 62.5 62.6 62.7 62.7 62.8 62.9 63.0 63.1 63.2 63.3 63.4 63.5 63.5 63.6 63.7 63.8 63.9 64.0 64.1 64.2 64.2 64.3 64.4 64.5 64.6 64.7 64.8 64.9 65.0 65.0 65.1 65.2 65.3 65.4 65.5 65.6 65.7 65.8 65.8 65.9 66.0 66.1 66.2 66.3 66.4 66.5 66.5 66.6 66.7 66.8 66.9 67.0 67.1 67.2 67.3 67.3 67.4 67.5 67.6 67.7 67.8 67.9 68.0 68.1 68.1 68.2 68.3 68.4 68.5 68.6 68.7 68.8 68.8 68.9 69.0 69.1 69.2 69.3 69.4 69.5 69.6 69.6 69.7 69.8 69.9 70.0 70.1 70.2 70.3 70.4 70.4 70.5 70.6 70.7 70.8 70.9 71.0 71.1 71.2 71.2 71.3 71.4 71.5 71.6 71.7 71.8 71.9 71.9 72.0 72.1 72.2 72.3 72.4 72.5 72.6 72.7 72.7 72.8 72.9 73.0 73.1 73.2 73.3 73.4 73.5 73.5 73.6 73.7 73.8 73.9 74.0 74.1 74.2 74.2 74.3 74.4 74.5 74.6 74.7 74.8 74.9 75.0 75.0 75.1 75.2 75.3 75.4 75.5 75.6 75.7 75.8 75.8 75.9 76.0 76.1 76.2 76.3 76.4 76.5 76.5 76.6 76.7 76.8 76.9 77.0 77.1 77.2 77.3 77.3 77.4 77.5 77.6 77.7 77.8 77.9 78.0 78.1 78.1 78.2 78.3 78.4 78.5 78.6 78.7 78.8 78.8 78.9 79.0 79.1 79.2 79.3 79.4 79.5 79.6 79.6 79.7 79.8 79.9 80.0 80.1 80.2 80.3 80.4 80.4 80.5 80.6 80.7 80.8 80.9 81.0 81.1 81.2 81.2 81.3 81.4 81.5 81.6 81.7 81.8 81.9 81.9 82.0 82.1 82.2 82.3 82.4 82.5 82.6 82.7 82.7 82.8 82.9 83.0 83.1 83.2 83.3 83.4 83.5 83.5 83.6 83.7 83.8 83.9 84.0 84.1 84.2 84.2 84.3 84.4 84.5 84.6 84.7 84.8 84.9 85.0 85.0 85.1 85.2 85.3 85.4 85.5 85.6 85.7 85.8 85.8 85.9 86.0 86.1 86.2 86.3 86.4 86.5 86.5 86.6 86.7 86.8 86.9 87.0 87.1 87.2 87.3 87.3 87.4 87.5 87.6 87.7 87.8 87.9 88.0 88.1 88.1 88.2 88.3 88.4 88.5 88.6 88.7 88.8 88.8 88.9 89.0 89.1 89.2 89.3 89.4 89.5 89.6 89.6 89.7 89.8 89.9 90.0 90.1 90.2 90.3 90.4 90.4 90.5 90.6 90.7 90.8 90.9 91.0 91.1 91.2 91.2 91.3 91.4 91.5 91.6 91.7 91.8 91.9 91.9 92.0 92.1 92.2 92.3 92.4 92.5 92.6 92.7 92.7 92.8 92.9 93.0 93.1 93.2 93.3 93.4 93.5 93.5 93.6 93.7 93.8 93.9 94.0 94.1 94.2 94.2 94.3 94.4 94.5 94.6 94.7 94.8 94.9 95.0 95.0 95.1 95.2 95.3 95.4 95.5 95.6 95.7 95.8 95.8 95.9 96.0 96.1 96.2 96.3 96.4 96.5 96.5 96.6 96.7 96.8 96.9 97.0 97.1 97.2 97.3 97.3 97.4 97.5 97.6 97.7 97.8 97.9 98.0 98.1 98.1 98.2 98.3 98.4 98.5 98.6 98.7 98.8 98.8 98.9 99.0 99.1 99.2 99.3 99.4 99.5 99.6 99.6 99.7 99.8 99.9 -found 57 predictions from path traversal Error with prediction: snap lend_intergenic: 3605, rend_intergenic: 1509 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 4291, rend_intergenic: 3810 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 11549, rend_intergenic: 5370 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 21224, rend_intergenic: 12479 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 28761, rend_intergenic: 23162 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 32603, rend_intergenic: 30190 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 41043, rend_intergenic: 38879 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 43035, rend_intergenic: 41158 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 61918, rend_intergenic: 49736 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 73408, rend_intergenic: 67596 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 87379, rend_intergenic: 83899 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 110840, rend_intergenic: 106547 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 118812, rend_intergenic: 113739 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 119142, rend_intergenic: 119048 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 136419, rend_intergenic: 120531 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 142233, rend_intergenic: 138860 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 145883, rend_intergenic: 143688 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 153819, rend_intergenic: 146690 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 159385, rend_intergenic: 153824 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 183265, rend_intergenic: 159701 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 187458, rend_intergenic: 183324 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 192778, rend_intergenic: 187550 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 202642, rend_intergenic: 193923 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 213856, rend_intergenic: 207568 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 223532, rend_intergenic: 214008 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 249330, rend_intergenic: 229749 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -reporting highest scoring path thru the trellis. -found 20 predictions persist after filtering for low support