-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_15/scaffold_15_2741280-2917956

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for snap_scaffold_15-snap.604-T1
Valid prediction for Augustus_model.g24553.t1
Valid prediction for GlimmerHMM_glimmerT_36560-T1
Valid prediction for snap_scaffold_15-snap.609-T1
Valid prediction for GlimmerHMM_glimmerT_36562-T1
Valid prediction for Augustus_model.g24560.t1
Valid prediction for GlimmerHMM_glimmerT_36573-T1
Valid prediction for snap_scaffold_15-snap.616-T1
Valid prediction for snap_scaffold_15-snap.593-T1
Valid prediction for snap_scaffold_15-snap.622-T1
Valid prediction for Augustus_model.g24561.t1
Couldn't classify 126153, 126304
Couldn't classify 126327, 126339
Sorry, prediction CodingQuarry_transcript_17904-T1 fails validation.
(ATG)	 TT	124335-124418	GT	AGG
(GTG)	 AG	124525-124686	GT	TGG
(CTG)	 AG	125042-125239	GT	AGG
(GAG)	 AG	125490-125630	GT	AGG
(ATC)	 AG	126153-126304	CC	GAC
(CCA)	 AC	126327-126339	CG	AGC
-recovered CodingQuarry_transcript_17904-T1, initial, 124335, 124418
-recovered CodingQuarry_transcript_17904-T1, internal, 124525, 124686
-recovered CodingQuarry_transcript_17904-T1, internal, 125042, 125239
-recovered CodingQuarry_transcript_17904-T1, internal, 125490, 125630
Valid prediction for GlimmerHMM_glimmerT_36554-T1
Valid prediction for HiQ_model.g24552.t1
Valid prediction for GeneMark_model.62889_t
Valid prediction for Augustus_model.g24554.t1
Valid prediction for GeneMark_model.62876_t
Valid prediction for snap_scaffold_15-snap.588-T1
Valid prediction for GeneMark_model.62925_t
Valid prediction for snap_scaffold_15-snap.624-T1
Valid prediction for Augustus_model.g24562.t1
Couldn't classify 123080, 123224
Sorry, prediction pasa_asmbl_14026.p1 fails validation.
(ATG)	 TA	120897-121051	GT	AGG
(TGA)	 AG	122349-122489	GT	AGG
(GTT)	 AG	123080-123224	GC	TCG
-recovered pasa_asmbl_14026.p1, initial, 120897, 121051
-recovered pasa_asmbl_14026.p1, internal, 122349, 122489
-recovered pasa_asmbl_14026.p1, internal, 123080, 123224
Valid prediction for GeneMark_model.62902_t
Valid prediction for snap_scaffold_15-snap.620-T1
Valid prediction for GeneMark_model.62890_t
Valid prediction for GeneMark_model.62895_t
Valid prediction for GeneMark_model.62910_t
Valid prediction for snap_scaffold_15-snap.608-T1
Valid prediction for snap_scaffold_15-snap.591-T1
Valid prediction for GlimmerHMM_glimmerT_36561-T1
Valid prediction for GeneMark_model.62921_t
Valid prediction for GeneMark_model.62923_t
Valid prediction for GlimmerHMM_glimmerT_36575-T1
Valid prediction for CodingQuarry_transcript_17900-T1
Valid prediction for GeneMark_model.62901_t
Valid prediction for snap_scaffold_15-snap.634-T1
Valid prediction for snap_scaffold_15-snap.612-T1
Valid prediction for GeneMark_model.62894_t
Valid prediction for snap_scaffold_15-snap.595-T1
Valid prediction for GeneMark_model.62920_t
Valid prediction for GlimmerHMM_glimmerT_36555-T1
Valid prediction for GeneMark_model.62885_t
Valid prediction for snap_scaffold_15-snap.623-T1
Valid prediction for snap_scaffold_15-snap.631-T1
Valid prediction for GeneMark_model.62909_t
Valid prediction for snap_scaffold_15-snap.606-T1
Valid prediction for GeneMark_model.62913_t
Valid prediction for pasa_asmbl_14901.p1
Valid prediction for GeneMark_model.62887_t
Valid prediction for GeneMark_model.62912_t
Valid prediction for GeneMark_model.62893_t
Valid prediction for snap_scaffold_15-snap.630-T1
Valid prediction for GeneMark_model.62917_t
Valid prediction for snap_scaffold_15-snap.611-T1
Valid prediction for GeneMark_model.62878_t
Valid prediction for snap_scaffold_15-snap.614-T1
Valid prediction for snap_scaffold_15-snap.598-T1
Valid prediction for Augustus_model.g24548.t1
Valid prediction for GeneMark_model.62882_t
Valid prediction for GeneMark_model.62884_t
Valid prediction for snap_scaffold_15-snap.602-T1
Valid prediction for GlimmerHMM_glimmerT_36577-T1
Valid prediction for GeneMark_model.62892_t
Valid prediction for GlimmerHMM_glimmerT_36574-T1
Valid prediction for GeneMark_model.62905_t
Valid prediction for snap_scaffold_15-snap.619-T1
Valid prediction for pasa_asmbl_14021.p2
Valid prediction for GlimmerHMM_glimmerT_36563-T1
Valid prediction for snap_scaffold_15-snap.596-T1
Valid prediction for GeneMark_model.62899_t
Valid prediction for GeneMark_model.62891_t
Valid prediction for CodingQuarry_transcript_17901-T1
Valid prediction for CodingQuarry_transcript_17899-T1
Valid prediction for GeneMark_model.62873_t
Valid prediction for Augustus_model.g24551.t1
Valid prediction for GeneMark_model.62915_t

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for snap_scaffold_15-snap.626-T1
Valid prediction for pasa_asmbl_15070.p1
Valid prediction for GeneMark_model.62888_t
Valid prediction for GlimmerHMM_glimmerT_36576-T1
Valid prediction for GeneMark_model.62916_t
Valid prediction for GeneMark_model.62914_t
Valid prediction for snap_scaffold_15-snap.600-T1
Valid prediction for HiQ_model.g24550.t1
Valid prediction for GeneMark_model.62907_t
Valid prediction for GeneMark_model.62874_t
Couldn't classify 155910, 155990
Sorry, prediction pasa_asmbl_15048.p1 fails validation.
(AAC)	 AG	155910-155990	GT	TGG
(CGG)	 AG	156674-156781	GT	CGG
(ATC)	 AG	157966-158175	AA	AGA
-recovered pasa_asmbl_15048.p1, terminal, 157966, 158175
-recovered pasa_asmbl_15048.p1, internal, 155910, 155990
-recovered pasa_asmbl_15048.p1, internal, 156674, 156781
Valid prediction for snap_scaffold_15-snap.621-T1
Valid prediction for GeneMark_model.62881_t
Valid prediction for GlimmerHMM_glimmerT_36578-T1
Valid prediction for snap_scaffold_15-snap.617-T1
Valid prediction for GeneMark_model.62879_t
Valid prediction for snap_scaffold_15-snap.610-T1
Valid prediction for snap_scaffold_15-snap.628-T1
Valid prediction for snap_scaffold_15-snap.597-T1
Valid prediction for snap_scaffold_15-snap.632-T1
Valid prediction for GlimmerHMM_glimmerT_36569-T1
Valid prediction for GeneMark_model.62898_t
Valid prediction for GeneMark_model.62906_t
Couldn't classify 144237, 144587
Sorry, prediction pasa_asmbl_15056.p1 fails validation.
(ATG)	 CC	136007-136103	GT	AGG
(TTG)	 AG	136335-136390	GT	GGG
(AAT)	 AG	137266-137324	GT	AGG
(GTA)	 AG	137532-137806	GT	CGG
(ATT)	 AG	138015-138098	GT	AGG
(TTC)	 AG	138380-138595	GT	AGG
(GCA)	 AG	139443-139567	GT	TGG
(ACA)	 AG	139819-139905	GT	TGG
(CCG)	 AG	141481-141579	GT	AGG
(GGC)	 AG	141725-141892	GT	CGG
(GTG)	 AG	142072-142269	GT	AGG
(CTG)	 AG	142716-142817	GT	AGG
(GGT)	 AG	143110-143172	GT	GGG
(GGT)	 AG	143873-143971	GT	AGG
(GAC)	 AG	144237-144587	CC	AAC
-recovered pasa_asmbl_15056.p1, initial, 136007, 136103
-recovered pasa_asmbl_15056.p1, internal, 136335, 136390
-recovered pasa_asmbl_15056.p1, internal, 137266, 137324
-recovered pasa_asmbl_15056.p1, internal, 137532, 137806
-recovered pasa_asmbl_15056.p1, internal, 138015, 138098
-recovered pasa_asmbl_15056.p1, internal, 138380, 138595
-recovered pasa_asmbl_15056.p1, internal, 139443, 139567
-recovered pasa_asmbl_15056.p1, internal, 139819, 139905
-recovered pasa_asmbl_15056.p1, internal, 141481, 141579
-recovered pasa_asmbl_15056.p1, internal, 141725, 141892
-recovered pasa_asmbl_15056.p1, internal, 142072, 142269
-recovered pasa_asmbl_15056.p1, internal, 142716, 142817
-recovered pasa_asmbl_15056.p1, internal, 143110, 143172
-recovered pasa_asmbl_15056.p1, internal, 143873, 143971
Valid prediction for GlimmerHMM_glimmerT_36566-T1
Valid prediction for GeneMark_model.62922_t
Valid prediction for snap_scaffold_15-snap.589-T1
Sorry, intron length (7) is less than minimum required (10)
Valid prediction for GlimmerHMM_glimmerT_36567-T1
Valid prediction for HiQ_model.g24556.t1
Valid prediction for GeneMark_model.62911_t
Valid prediction for snap_scaffold_15-snap.599-T1
Valid prediction for snap_scaffold_15-snap.592-T1
Valid prediction for HiQ_model.g24559.t1
Couldn't classify 101541, 101649
Sorry, prediction CodingQuarry_transcript_17902-T1 fails validation.
(ATG)	 TC	99106-99413	GT	GAG
(GGT)	 AG	101541-101649	TA	AGT
(CTT)	 AG	101828-101944	GT	AGG
(GTG)	 AG	102251-102365	GT	CCG
(GGC)	 AG	103147-103409	GT	CGG
(TAC)	 AG	105688-105757	GT	GAG
(TCC)	 AG	105837-105902	GT	AGG
(TTC)	 AG	108275-108291	AC	AAA
-recovered CodingQuarry_transcript_17902-T1, initial, 99106, 99413
-recovered CodingQuarry_transcript_17902-T1, terminal, 108275, 108291
-recovered CodingQuarry_transcript_17902-T1, internal, 101828, 101944
-recovered CodingQuarry_transcript_17902-T1, internal, 102251, 102365
-recovered CodingQuarry_transcript_17902-T1, internal, 103147, 103409
-recovered CodingQuarry_transcript_17902-T1, internal, 105688, 105757
-recovered CodingQuarry_transcript_17902-T1, internal, 105837, 105902
Valid prediction for GlimmerHMM_glimmerT_36565-T1
Valid prediction for GeneMark_model.62904_t
Valid prediction for GlimmerHMM_glimmerT_36568-T1
Valid prediction for GeneMark_model.62880_t
Valid prediction for GlimmerHMM_glimmerT_36557-T1
Valid prediction for CodingQuarry_transcript_17898-T1
Valid prediction for GeneMark_model.62886_t
Valid prediction for snap_scaffold_15-snap.607-T1
Couldn't classify 58252, 58916
Sorry, prediction pasa_asmbl_15066.p1 fails validation.
(ATG)	 CG	57527-57545	GT	GGG
(GTG)	 AG	58252-58916	GA	CAG
-recovered pasa_asmbl_15066.p1, initial, 57527, 57545
Valid prediction for Augustus_model.g24549.t1
Valid prediction for GlimmerHMM_glimmerT_36570-T1
Valid prediction for GlimmerHMM_glimmerT_36559-T1
Valid prediction for snap_scaffold_15-snap.633-T1
Valid prediction for GeneMark_model.62924_t
Valid prediction for snap_scaffold_15-snap.605-T1
Valid prediction for snap_scaffold_15-snap.594-T1
Valid prediction for GlimmerHMM_glimmerT_36558-T1
Valid prediction for GeneMark_model.62877_t
Valid prediction for CodingQuarry_transcript_17905-T1
Valid prediction for snap_scaffold_15-snap.615-T1
Valid prediction for Augustus_model.g24564.t1
Valid prediction for GeneMark_model.62919_t
Valid prediction for GeneMark_model.62883_t
Valid prediction for Augustus_model.g24563.t1
Valid prediction for GlimmerHMM_glimmerT_36556-T1
Valid prediction for snap_scaffold_15-snap.625-T1
Valid prediction for Augustus_model.g24557.t1
Valid prediction for GeneMark_model.62903_t
Couldn't classify 59148, 59504
Sorry, prediction pasa_asmbl_15065.p1 fails validation.
(CTC)	 TA	59148-59504	GG	TCG
Valid prediction for CodingQuarry_transcript_17903-T1
Valid prediction for Augustus_model.g24558.t1
Valid prediction for snap_scaffold_15-snap.629-T1
Valid prediction for snap_scaffold_15-snap.603-T1
Valid prediction for GeneMark_model.62875_t
Valid prediction for snap_scaffold_15-snap.601-T1
Valid prediction for snap_scaffold_15-snap.627-T1
Valid prediction for snap_scaffold_15-snap.618-T1
Valid prediction for GeneMark_model.62926_t
Valid prediction for GlimmerHMM_glimmerT_36572-T1
Valid prediction for snap_scaffold_15-snap.613-T1
Valid prediction for GlimmerHMM_glimmerT_36564-T1
Valid prediction for GeneMark_model.62900_t
Valid prediction for snap_scaffold_15-snap.590-T1
Valid prediction for GlimmerHMM_glimmerT_36571-T1
Couldn't classify 153739, 153754
Couldn't classify 155763, 155837
Sorry, prediction pasa_asmbl_15049.p1 fails validation.
(GCT)	 CA	153739-153754	GT	TGG
(GCA)	 AG	154059-154203	GT	AGG
(TGG)	 AG	154624-154785	GT	ACG
(GTA)	 AG	154980-155067	GT	GGG
(AGC)	 AG	155166-155291	GT	ACG
(CCG)	 AG	155763-155837	GG	GAG
-recovered pasa_asmbl_15049.p1, internal, 154059, 154203
-recovered pasa_asmbl_15049.p1, internal, 154624, 154785
-recovered pasa_asmbl_15049.p1, internal, 154980, 155067
-recovered pasa_asmbl_15049.p1, internal, 155166, 155291
Valid prediction for GeneMark_model.62897_t
Valid prediction for Augustus_model.g24555.t1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 8656, rend_intergenic: 5810  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 12936, rend_intergenic: 8715  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 22189, rend_intergenic: 18503  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 28236, rend_intergenic: 22448  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 37342, rend_intergenic: 31719  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 50288, rend_intergenic: 45229  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 54631, rend_intergenic: 50865  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 65637, rend_intergenic: 61936  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 77572, rend_intergenic: 68309  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 92922, rend_intergenic: 82443  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 99486, rend_intergenic: 96535  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 101929, rend_intergenic: 99555  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 108500, rend_intergenic: 106572  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 114696, rend_intergenic: 108910  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 127240, rend_intergenic: 120897  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 139298, rend_intergenic: 127425  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 146980, rend_intergenic: 143262  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 174844, rend_intergenic: 169565  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 176677
-exon list size: 735


building trellis

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52.6    
52.8    
52.9    
53.1    
53.2    
53.3    
53.5    
53.6    
53.7    
53.9    
54.0    
54.1    
54.3    
54.4    
54.5    
54.7    
54.8    
55.0    
55.1    
55.2    
55.4    
55.5    
55.6    
55.8    
55.9    
56.0    
56.2    
56.3    
56.4    
56.6    
56.7    
56.9    
57.0    
57.1    
57.3    
57.4    
57.5    
57.7    
57.8    
57.9    
58.1    
58.2    
58.3    
58.5    
58.6    
58.8    
58.9    
59.0    
59.2    
59.3    
59.4    
59.6    
59.7    
59.8    
60.0    
60.1    
60.2    
60.4    
60.5    
60.7    
60.8    
60.9    
61.1    
61.2    
61.3    
61.5    
61.6    
61.7    
61.9    
62.0    
62.1    
62.3    
62.4    
62.6    
62.7    
62.8    
63.0    
63.1    
63.2    
63.4    
63.5    
63.6    
63.8    
63.9    
64.0    
64.2    
64.3    
64.5    
64.6    
64.7    
64.9    
65.0    
65.1    
65.3    
65.4    
65.5    
65.7    
65.8    
65.9    
66.1    
66.2    
66.4    
66.5    
66.6    
66.8    
66.9    
67.0    
67.2    
67.3    
67.4    
67.6    
67.7    
67.8    
68.0    
68.1    
68.2    
68.4    
68.5    
68.7    
68.8    
68.9    
69.1    
69.2    
69.3    
69.5    
69.6    
69.7    
69.9    
70.0    
70.1    
70.3    
70.4    
70.6    
70.7    
70.8    
71.0    
71.1    
71.2    
71.4    
71.5    
71.6    
71.8    
71.9    
72.0    
72.2    
72.3    
72.5    
72.6    
72.7    
72.9    
73.0    
73.1    
73.3    
73.4    
73.5    
73.7    
73.8    
73.9    
74.1    
74.2    
74.4    
74.5    
74.6    
74.8    
74.9    
75.0    
75.2    
75.3    
75.4    
75.6    
75.7    
75.8    
76.0    
76.1    
76.3    
76.4    
76.5    
76.7    
76.8    
76.9    
77.1    
77.2    
77.3    
77.5    
77.6    
77.7    
77.9    
78.0    
78.2    
78.3    
78.4    
78.6    
78.7    
78.8    
79.0    
79.1    
79.2    
79.4    
79.5    
79.6    
79.8    
79.9    
80.1    
80.2    
80.3    
80.5    
80.6    
80.7    
80.9    
81.0    
81.1    
81.3    
81.4    
81.5    
81.7    
81.8    
82.0    
82.1    
82.2    
82.4    
82.5    
82.6    
82.8    
82.9    
83.0    
83.2    
83.3    
83.4    
83.6    
83.7    
83.9    
84.0    
84.1    
84.3    
84.4    
84.5    
84.7    
84.8    
84.9    
85.1    
85.2    
85.3    
85.5    
85.6    
85.8    
85.9    
86.0    
86.2    
86.3    
86.4    
86.6    
86.7    
86.8    
87.0    
87.1    
87.2    
87.4    
87.5    
87.7    
87.8    
87.9    
88.1    
88.2    
88.3    
88.5    
88.6    
88.7    
88.9    
89.0    
89.1    
89.3    
89.4    
89.6    
89.7    
89.8    
90.0    
90.1    
90.2    
90.4    
90.5    
90.6    
90.8    
90.9    
91.0    
91.2    
91.3    
91.5    
91.6    
91.7    
91.9    
92.0    
92.1    
92.3    
92.4    
92.5    
92.7    
92.8    
92.9    
93.1    
93.2    
93.4    
93.5    
93.6    
93.8    
93.9    
94.0    
94.2    
94.3    
94.4    
94.6    
94.7    
94.8    
95.0    
95.1    
95.3    
95.4    
95.5    
95.7    
95.8    
95.9    
96.1    
96.2    
96.3    
96.5    
96.6    
96.7    
96.9    
97.0    
97.2    
97.3    
97.4    
97.6    
97.7    
97.8    
98.0    
98.1    
98.2    
98.4    
98.5    
98.6    
98.8    
98.9    
99.1    
99.2    
99.3    
99.5    
99.6    
99.7    
99.9    
-found 31 predictions from path traversal
Error with prediction: snap lend_intergenic: 8656, rend_intergenic: 5810  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 12936, rend_intergenic: 8715  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 22189, rend_intergenic: 18503  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 28236, rend_intergenic: 22448  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 37342, rend_intergenic: 31719  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 50288, rend_intergenic: 45229  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 54631, rend_intergenic: 50865  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 65637, rend_intergenic: 61936  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 77572, rend_intergenic: 68309  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 92922, rend_intergenic: 82443  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 99486, rend_intergenic: 96535  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 101929, rend_intergenic: 99555  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 108500, rend_intergenic: 106572  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 114696, rend_intergenic: 108910  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 127240, rend_intergenic: 120897  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 139298, rend_intergenic: 127425  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 146980, rend_intergenic: 143262  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 174844, rend_intergenic: 169565  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 25 predictions persist after filtering for low support