-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_15/scaffold_15_15211502-15455443

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for Augustus_model.g25708.t1
Valid prediction for GlimmerHMM_glimmerT_38288-T1
Valid prediction for snap_scaffold_15-snap.3057-T1
Valid prediction for Augustus_model.g25699.t1
Valid prediction for CodingQuarry_transcript_18214-T1
Valid prediction for pasa_asmbl_14746.p1
Valid prediction for Augustus_model.g25713.t1
Valid prediction for CodingQuarry_transcript_18222-T1
Valid prediction for snap_scaffold_15-snap.3040-T1
Valid prediction for GlimmerHMM_glimmerT_38308-T1
Valid prediction for GeneMark_model.65757_t
Valid prediction for pasa_asmbl_14698.p1
Valid prediction for CodingQuarry_transcript_18215-T1
Valid prediction for snap_scaffold_15-snap.3054-T1
Valid prediction for GlimmerHMM_glimmerT_38320-T1
Valid prediction for GlimmerHMM_glimmerT_38312-T1
Valid prediction for GlimmerHMM_glimmerT_38303-T1
Couldn't classify 134185, 134316
Couldn't classify 136489, 136538
Sorry, prediction pasa_asmbl_14704.p1 fails validation.
(CGT)	 AT	134185-134316	GT	ACG
(ATT)	 AG	136291-136414	GT	AGG
(GGC)	 AG	136489-136538	CC	GAC
-recovered pasa_asmbl_14704.p1, internal, 136291, 136414
Valid prediction for snap_scaffold_15-snap.3034-T1
Valid prediction for GeneMark_model.65768_t
Valid prediction for pasa_asmbl_14737.p3
Valid prediction for snap_scaffold_15-snap.3065-T1
Valid prediction for Augustus_model.g25695.t1
Valid prediction for snap_scaffold_15-snap.3053-T1
Valid prediction for snap_scaffold_15-snap.3062-T1
Valid prediction for snap_scaffold_15-snap.3037-T1
Valid prediction for snap_scaffold_15-snap.3064-T1
Valid prediction for Augustus_model.g25715.t1
Valid prediction for GeneMark_model.65764_t
Valid prediction for GeneMark_model.65760_t
Valid prediction for GlimmerHMM_glimmerT_38301-T1
Valid prediction for snap_scaffold_15-snap.3069-T1
Valid prediction for Augustus_model.g25705.t1
Valid prediction for snap_scaffold_15-snap.3050-T1
Valid prediction for GlimmerHMM_glimmerT_38298-T1
Valid prediction for GlimmerHMM_glimmerT_38306-T1
Valid prediction for snap_scaffold_15-snap.3032-T1
Valid prediction for snap_scaffold_15-snap.3048-T1
Valid prediction for snap_scaffold_15-snap.3051-T1
Valid prediction for snap_scaffold_15-snap.3066-T1
Valid prediction for snap_scaffold_15-snap.3033-T1
Couldn't classify 185622, 185681
Couldn't classify 188520, 188681
Sorry, prediction pasa_asmbl_14714.p1 fails validation.
(GTA)	 AC	185622-185681	GT	AGG
(GTG)	 AG	186848-187062	GT	TAG
(TCT)	 AG	188028-188412	GT	AGG
(TCT)	 AG	188520-188681	CC	CCC
-recovered pasa_asmbl_14714.p1, internal, 186848, 187062
-recovered pasa_asmbl_14714.p1, internal, 188028, 188412
Valid prediction for GlimmerHMM_glimmerT_38315-T1
Valid prediction for Augustus_model.g25693.t1
Valid prediction for GlimmerHMM_glimmerT_38290-T1
Valid prediction for Augustus_model.g25702.t1
Valid prediction for snap_scaffold_15-snap.3067-T1
Valid prediction for Augustus_model.g25704.t1
Valid prediction for GlimmerHMM_glimmerT_38313-T1
Valid prediction for HiQ_model.g25701.t1
Valid prediction for HiQ_model.g25720.t1
Valid prediction for GeneMark_model.65766_t
Valid prediction for snap_scaffold_15-snap.3070-T1
Valid prediction for GeneMark_model.65754_t
Couldn't classify 198076, 198299
Sorry, prediction pasa_asmbl_14718.p1 fails validation.
(TTG)	 GC	198076-198299	GT	TTG
(GTA)	 AG	198403-198491	GT	GGG
(CAG)	 AG	198682-198704	CT	AGC
-recovered pasa_asmbl_14718.p1, terminal, 198682, 198704
-recovered pasa_asmbl_14718.p1, internal, 198403, 198491
Valid prediction for snap_scaffold_15-snap.3052-T1
Valid prediction for GlimmerHMM_glimmerT_38300-T1
Valid prediction for snap_scaffold_15-snap.3068-T1
Valid prediction for GlimmerHMM_glimmerT_38302-T1
Valid prediction for snap_scaffold_15-snap.3076-T1
Valid prediction for GeneMark_model.65770_t
Couldn't classify 188931, 189178
Sorry, prediction pasa_asmbl_14715.p1 fails validation.
(CCC)	 TC	188931-189178	GT	AGG
(GCG)	 AG	189317-189635	CT	GAC
-recovered pasa_asmbl_14715.p1, terminal, 189317, 189635
Valid prediction for GlimmerHMM_glimmerT_38299-T1
Valid prediction for GeneMark_model.65747_t
Valid prediction for GlimmerHMM_glimmerT_38292-T1
Valid prediction for Augustus_model.g25717.t1
Valid prediction for GeneMark_model.65763_t
Valid prediction for GlimmerHMM_glimmerT_38318-T1
Valid prediction for GlimmerHMM_glimmerT_38296-T1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for GeneMark_model.65746_t
Valid prediction for GeneMark_model.65765_t
Valid prediction for GlimmerHMM_glimmerT_38304-T1
Valid prediction for snap_scaffold_15-snap.3038-T1
Valid prediction for snap_scaffold_15-snap.3059-T1
Valid prediction for GlimmerHMM_glimmerT_38307-T1
Couldn't classify 99993, 100105
Couldn't classify 100603, 100658
Sorry, prediction pasa_asmbl_15785.p1 fails validation.
(GTG)	 AG	99993-100105	GT	GGG
(CTG)	 AG	100193-100331	GT	TGG
(GTA)	 AG	100446-100536	GT	AGG
(GTC)	 AG	100603-100658	AT	CCA
-recovered pasa_asmbl_15785.p1, internal, 99993, 100105
-recovered pasa_asmbl_15785.p1, internal, 100193, 100331
-recovered pasa_asmbl_15785.p1, internal, 100446, 100536
Valid prediction for Augustus_model.g25706.t1
Valid prediction for snap_scaffold_15-snap.3073-T1
Valid prediction for GlimmerHMM_glimmerT_38305-T1
Valid prediction for Augustus_model.g25703.t1
Valid prediction for Augustus_model.g25697.t1
Valid prediction for snap_scaffold_15-snap.3060-T1
Valid prediction for GlimmerHMM_glimmerT_38310-T1
Valid prediction for Augustus_model.g25712.t1
Valid prediction for GeneMark_model.65748_t
Valid prediction for snap_scaffold_15-snap.3039-T1
Valid prediction for snap_scaffold_15-snap.3036-T1
Valid prediction for GeneMark_model.65744_t
Valid prediction for GeneMark_model.65761_t
Valid prediction for GlimmerHMM_glimmerT_38297-T1
Valid prediction for Augustus_model.g25692.t1
Valid prediction for snap_scaffold_15-snap.3046-T1
Valid prediction for GlimmerHMM_glimmerT_38319-T1
Valid prediction for Augustus_model.g25700.t1
Valid prediction for GeneMark_model.65762_t
Valid prediction for Augustus_model.g25707.t1
Couldn't classify 65955, 67049
Sorry, prediction pasa_asmbl_15788.p1 fails validation.
(GCT)	 GA	65955-67049	GT	AGG
Valid prediction for Augustus_model.g25698.t1
Valid prediction for GeneMark_model.65752_t
Couldn't classify 201093, 201731
Sorry, prediction pasa_asmbl_15784.p1 fails validation.
(CTC)	 CA	201093-201731	AA	CCA
Valid prediction for GlimmerHMM_glimmerT_38291-T1
Couldn't classify 215232, 215325
Sorry, prediction pasa_asmbl_15779.p1 fails validation.
(CTG)	 CC	215232-215325	GT	CGG
(CTG)	 AG	216468-216764	GT	AGG
(TAT)	 AG	216981-217208	GT	GGG
(GCG)	 AG	217297-217564	GT	AGG
(GTT)	 AG	217903-218032	GT	AGG
(TTT)	 AG	218180-218314	GT	TTG
(AGT)	 AG	218522-218659	GT	AGG
(GTG)	 AG	219635-219760	GT	AGG
(GAT)	 AG	220977-221098	GT	AGG
(CAA)	 AG	221960-222152	GT	AGG
(ATT)	 AG	222304-222435	GC	AGG
-recovered pasa_asmbl_15779.p1, terminal, 222304, 222435
-recovered pasa_asmbl_15779.p1, internal, 216468, 216764
-recovered pasa_asmbl_15779.p1, internal, 216981, 217208
-recovered pasa_asmbl_15779.p1, internal, 217297, 217564
-recovered pasa_asmbl_15779.p1, internal, 217903, 218032
-recovered pasa_asmbl_15779.p1, internal, 218180, 218314
-recovered pasa_asmbl_15779.p1, internal, 218522, 218659
-recovered pasa_asmbl_15779.p1, internal, 219635, 219760
-recovered pasa_asmbl_15779.p1, internal, 220977, 221098
-recovered pasa_asmbl_15779.p1, internal, 221960, 222152
-recovered pasa_asmbl_15779.p1, internal, 222304, 222435
Valid prediction for GlimmerHMM_glimmerT_38317-T1
Valid prediction for snap_scaffold_15-snap.3030-T1
Couldn't classify 71509, 71880
Sorry, prediction pasa_asmbl_14713.p1 fails validation.
(ATG)	 AG	71509-71880	GA	GAG
Valid prediction for snap_scaffold_15-snap.3035-T1
Valid prediction for Augustus_model.g25696.t1
Valid prediction for snap_scaffold_15-snap.3071-T1
Valid prediction for GlimmerHMM_glimmerT_38311-T1
Valid prediction for Augustus_model.g25710.t1
Valid prediction for Augustus_model.g25694.t1
Valid prediction for Augustus_model.g25691.t1
Valid prediction for snap_scaffold_15-snap.3043-T1
Valid prediction for HiQ_model.g25718.t1
Valid prediction for CodingQuarry_transcript_18218-T1
Valid prediction for GeneMark_model.65749_t
Valid prediction for Augustus_model.g25716.t1
Valid prediction for HiQ_model.g25709.t1
Couldn't classify 211781, 211951
Sorry, prediction pasa_asmbl_15958.p1 fails validation.
(ATG)	 GA	209491-209844	GT	AGG
(GTT)	 AG	210731-210799	GT	AGG
(CTG)	 AG	211067-211172	GT	TCG
(ATC)	 AG	211422-211609	GT	ATG
(TGT)	 AG	211781-211951	AA	TCA
-recovered pasa_asmbl_15958.p1, initial, 209491, 209844
-recovered pasa_asmbl_15958.p1, internal, 210731, 210799
-recovered pasa_asmbl_15958.p1, internal, 211067, 211172
-recovered pasa_asmbl_15958.p1, internal, 211422, 211609
Valid prediction for GeneMark_model.65767_t
Valid prediction for GeneMark_model.65756_t
Valid prediction for GlimmerHMM_glimmerT_38316-T1
Valid prediction for snap_scaffold_15-snap.3049-T1
Valid prediction for snap_scaffold_15-snap.3042-T1
Couldn't classify 30637, 30805
Couldn't classify 31219, 31431
Sorry, prediction CodingQuarry_transcript_18221-T1 fails validation.
(ATG)	 CA	23976-24230	GT	CGG
(GAA)	 AG	26504-26573	GT	TGG
(GTG)	 AG	27209-27327	GT	AGG
(TTC)	 AG	27552-27685	GT	AAG
(GTT)	 AG	27762-27930	GT	ATG
(GTG)	 AG	28321-28401	GT	AGG
(TGT)	 AG	29693-29784	GT	AAG
(AGC)	 AG	29903-29980	GT	TGG
(GAT)	 AG	30134-30294	GT	AGG
(ACA)	 AG	30637-30805	AT	TCA
(GCA)	 CT	31219-31431	GT	GAG
(GGA)	 AG	31672-31708	GT	TGG
(CCA)	 AG	32598-32693	GT	AGG
(CCC)	 AG	33247-33321	GT	ATG
(GAT)	 AG	33447-33504	GT	ATG
(ATA)	 AG	33580-33644	GT	ATG
(ACA)	 AG	33841-33996	TA	GAT
-recovered CodingQuarry_transcript_18221-T1, initial, 23976, 24230
-recovered CodingQuarry_transcript_18221-T1, terminal, 33841, 33996
-recovered CodingQuarry_transcript_18221-T1, internal, 26504, 26573
-recovered CodingQuarry_transcript_18221-T1, internal, 27209, 27327
-recovered CodingQuarry_transcript_18221-T1, internal, 27552, 27685
-recovered CodingQuarry_transcript_18221-T1, internal, 27762, 27930
-recovered CodingQuarry_transcript_18221-T1, internal, 28321, 28401
-recovered CodingQuarry_transcript_18221-T1, internal, 29693, 29784
-recovered CodingQuarry_transcript_18221-T1, internal, 29903, 29980
-recovered CodingQuarry_transcript_18221-T1, internal, 30134, 30294
-recovered CodingQuarry_transcript_18221-T1, internal, 31672, 31708
-recovered CodingQuarry_transcript_18221-T1, internal, 32598, 32693
-recovered CodingQuarry_transcript_18221-T1, internal, 33247, 33321
-recovered CodingQuarry_transcript_18221-T1, internal, 33447, 33504
-recovered CodingQuarry_transcript_18221-T1, internal, 33580, 33644
Valid prediction for GeneMark_model.65753_t
Valid prediction for GlimmerHMM_glimmerT_38293-T1
Valid prediction for GlimmerHMM_glimmerT_38289-T1
Valid prediction for snap_scaffold_15-snap.3075-T1
Valid prediction for GeneMark_model.65769_t
Valid prediction for GeneMark_model.65758_t
Valid prediction for GlimmerHMM_glimmerT_38314-T1
Valid prediction for snap_scaffold_15-snap.3074-T1
Couldn't classify 30637, 30805
Couldn't classify 31219, 31431
Sorry, prediction CodingQuarry_transcript_18220-T1 fails validation.
(ATG)	 CA	23976-24230	GT	CGG
(GAA)	 AG	26504-26573	GT	TGG
(GTG)	 AG	27209-27327	GT	AGG
(TTC)	 AG	27552-27685	GT	AAG
(GTT)	 AG	27762-27930	GT	ATG
(GTG)	 AG	28321-28401	GT	AGG
(TGT)	 AG	29693-29784	GT	AAG
(AGC)	 AG	29903-29980	GT	TGG
(GAT)	 AG	30134-30294	GT	AGG
(ACA)	 AG	30637-30805	AT	TCA
(GCA)	 CT	31219-31431	GT	GAG
(GGA)	 AG	31672-31807	TT	AAT
-recovered CodingQuarry_transcript_18220-T1, initial, 23976, 24230
-recovered CodingQuarry_transcript_18220-T1, terminal, 31672, 31807
-recovered CodingQuarry_transcript_18220-T1, internal, 26504, 26573
-recovered CodingQuarry_transcript_18220-T1, internal, 27209, 27327
-recovered CodingQuarry_transcript_18220-T1, internal, 27552, 27685
-recovered CodingQuarry_transcript_18220-T1, internal, 27762, 27930
-recovered CodingQuarry_transcript_18220-T1, internal, 28321, 28401
-recovered CodingQuarry_transcript_18220-T1, internal, 29693, 29784
-recovered CodingQuarry_transcript_18220-T1, internal, 29903, 29980
-recovered CodingQuarry_transcript_18220-T1, internal, 30134, 30294
Valid prediction for GeneMark_model.65755_t
Couldn't classify 73911, 74108
Sorry, prediction pasa_asmbl_15786.p1 fails validation.
(CAT)	 CC	73911-74108	GT	AGG
(GAT)	 AG	74396-74741	GT	TTG
(GCA)	 AG	75159-75225	GT	CCG
(GCG)	 AG	75478-75620	GT	AGG
(TGG)	 AG	75707-75810	GT	TTG
(GAG)	 AG	75933-76008	GT	AGG
(GGT)	 AG	77104-77192	GT	TGG
(GTG)	 AG	77288-77431	GT	AGG
(AAC)	 AG	77539-77655	GT	ACG
(ACT)	 AG	77786-77952	GT	AGG
(AGT)	 AG	80165-80432	AA	GAA
add_exon() Sorry, pasa_asmbl_15786.p1 77786-77952-terminal-2 is invalid.
-recovered pasa_asmbl_15786.p1, terminal, 77786, 77952
-recovered pasa_asmbl_15786.p1, terminal, 80165, 80432
-recovered pasa_asmbl_15786.p1, internal, 74396, 74741
-recovered pasa_asmbl_15786.p1, internal, 75159, 75225
-recovered pasa_asmbl_15786.p1, internal, 75478, 75620
-recovered pasa_asmbl_15786.p1, internal, 75707, 75810
-recovered pasa_asmbl_15786.p1, internal, 75933, 76008
-recovered pasa_asmbl_15786.p1, internal, 77104, 77192
-recovered pasa_asmbl_15786.p1, internal, 77288, 77431
-recovered pasa_asmbl_15786.p1, internal, 77539, 77655
-recovered pasa_asmbl_15786.p1, internal, 77786, 77952
Valid prediction for GeneMark_model.65745_t
Valid prediction for CodingQuarry_transcript_18212-T1
Valid prediction for GlimmerHMM_glimmerT_38287-T1
Valid prediction for GlimmerHMM_glimmerT_38294-T1
Valid prediction for snap_scaffold_15-snap.3072-T1
Couldn't classify 213360, 213469
Sorry, prediction pasa_asmbl_15781.p1 fails validation.
(ATG)	 AC	212301-212423	GT	AGG
(TTG)	 AG	212520-212613	GT	TGG
(CAG)	 AG	213035-213139	GT	AGG
(GGC)	 AG	213360-213469	GC	AGG
-recovered pasa_asmbl_15781.p1, initial, 212301, 212423
-recovered pasa_asmbl_15781.p1, internal, 212520, 212613
-recovered pasa_asmbl_15781.p1, internal, 213035, 213139
-recovered pasa_asmbl_15781.p1, internal, 213360, 213469
Valid prediction for snap_scaffold_15-snap.3047-T1
Valid prediction for snap_scaffold_15-snap.3045-T1
Valid prediction for GeneMark_model.65750_t
Valid prediction for snap_scaffold_15-snap.3055-T1
Valid prediction for snap_scaffold_15-snap.3041-T1
Valid prediction for snap_scaffold_15-snap.3058-T1
Valid prediction for snap_scaffold_15-snap.3056-T1
Valid prediction for Augustus_model.g25714.t1
Valid prediction for snap_scaffold_15-snap.3044-T1
Valid prediction for snap_scaffold_15-snap.3061-T1
Valid prediction for snap_scaffold_15-snap.3063-T1
Valid prediction for GlimmerHMM_glimmerT_38295-T1
Valid prediction for CodingQuarry_transcript_18211-T1
Valid prediction for CodingQuarry_transcript_18219-T1
Valid prediction for Augustus_model.g25711.t1
Valid prediction for GlimmerHMM_glimmerT_38309-T1
Valid prediction for Augustus_model.g25719.t1
Valid prediction for snap_scaffold_15-snap.3031-T1
Sorry, intron length (9) is less than minimum required (10)

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 29209, rend_intergenic: 27406  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 243942
-exon list size: 589


building trellis

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44.0    
44.2    
44.3    
44.5    
44.7    
44.8    
45.0    
45.2    
45.3    
45.5    
45.7    
45.9    
46.0    
46.2    
46.4    
46.5    
46.7    
46.9    
47.0    
47.2    
47.4    
47.5    
47.7    
47.9    
48.1    
48.2    
48.4    
48.6    
48.7    
48.9    
49.1    
49.2    
49.4    
49.6    
49.7    
49.9    
50.1    
50.3    
50.4    
50.6    
50.8    
50.9    
51.1    
51.3    
51.4    
51.6    
51.8    
51.9    
52.1    
52.3    
52.5    
52.6    
52.8    
53.0    
53.1    
53.3    
53.5    
53.6    
53.8    
54.0    
54.1    
54.3    
54.5    
54.7    
54.8    
55.0    
55.2    
55.3    
55.5    
55.7    
55.8    
56.0    
56.2    
56.3    
56.5    
56.7    
56.9    
57.0    
57.2    
57.4    
57.5    
57.7    
57.9    
58.0    
58.2    
58.4    
58.5    
58.7    
58.9    
59.1    
59.2    
59.4    
59.6    
59.7    
59.9    
60.1    
60.2    
60.4    
60.6    
60.7    
60.9    
61.1    
61.3    
61.4    
61.6    
61.8    
61.9    
62.1    
62.3    
62.4    
62.6    
62.8    
62.9    
63.1    
63.3    
63.5    
63.6    
63.8    
64.0    
64.1    
64.3    
64.5    
64.6    
64.8    
65.0    
65.1    
65.3    
65.5    
65.7    
65.8    
66.0    
66.2    
66.3    
66.5    
66.7    
66.8    
67.0    
67.2    
67.3    
67.5    
67.7    
67.9    
68.0    
68.2    
68.4    
68.5    
68.7    
68.9    
69.0    
69.2    
69.4    
69.5    
69.7    
69.9    
70.1    
70.2    
70.4    
70.6    
70.7    
70.9    
71.1    
71.2    
71.4    
71.6    
71.7    
71.9    
72.1    
72.3    
72.4    
72.6    
72.8    
72.9    
73.1    
73.3    
73.4    
73.6    
73.8    
73.9    
74.1    
74.3    
74.5    
74.6    
74.8    
75.0    
75.1    
75.3    
75.5    
75.6    
75.8    
76.0    
76.1    
76.3    
76.5    
76.6    
76.8    
77.0    
77.2    
77.3    
77.5    
77.7    
77.8    
78.0    
78.2    
78.3    
78.5    
78.7    
78.8    
79.0    
79.2    
79.4    
79.5    
79.7    
79.9    
80.0    
80.2    
80.4    
80.5    
80.7    
80.9    
81.0    
81.2    
81.4    
81.6    
81.7    
81.9    
82.1    
82.2    
82.4    
82.6    
82.7    
82.9    
83.1    
83.2    
83.4    
83.6    
83.8    
83.9    
84.1    
84.3    
84.4    
84.6    
84.8    
84.9    
85.1    
85.3    
85.4    
85.6    
85.8    
86.0    
86.1    
86.3    
86.5    
86.6    
86.8    
87.0    
87.1    
87.3    
87.5    
87.6    
87.8    
88.0    
88.2    
88.3    
88.5    
88.7    
88.8    
89.0    
89.2    
89.3    
89.5    
89.7    
89.8    
90.0    
90.2    
90.4    
90.5    
90.7    
90.9    
91.0    
91.2    
91.4    
91.5    
91.7    
91.9    
92.0    
92.2    
92.4    
92.6    
92.7    
92.9    
93.1    
93.2    
93.4    
93.6    
93.7    
93.9    
94.1    
94.2    
94.4    
94.6    
94.8    
94.9    
95.1    
95.3    
95.4    
95.6    
95.8    
95.9    
96.1    
96.3    
96.4    
96.6    
96.8    
97.0    
97.1    
97.3    
97.5    
97.6    
97.8    
98.0    
98.1    
98.3    
98.5    
98.6    
98.8    
99.0    
99.2    
99.3    
99.5    
99.7    
99.8    
-found 41 predictions from path traversal
Error with prediction: snap lend_intergenic: 29209, rend_intergenic: 27406  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 40 predictions persist after filtering for low support