-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_15/scaffold_15_13144321-13506754

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for CodingQuarry_transcript_18156-T1
Valid prediction for GlimmerHMM_glimmerT_38040-T1
Valid prediction for snap_scaffold_15-snap.2663-T1
Couldn't classify 204471, 204491
Sorry, prediction pasa_asmbl_14585.p1 fails validation.
(CCA)	 CG	204471-204491	GT	AGG
(GTA)	 AG	204792-205006	GT	AGG
(GTT)	 AG	205274-205361	GT	AGG
(CTG)	 AG	205646-205748	GT	AGG
(ACG)	 AG	206184-206263	AG	AAA
-recovered pasa_asmbl_14585.p1, terminal, 206184, 206263
-recovered pasa_asmbl_14585.p1, internal, 204792, 205006
-recovered pasa_asmbl_14585.p1, internal, 205274, 205361
-recovered pasa_asmbl_14585.p1, internal, 205646, 205748
Valid prediction for GeneMark_model.65371_t
Valid prediction for GlimmerHMM_glimmerT_38026-T1
Valid prediction for snap_scaffold_15-snap.2687-T1
Valid prediction for GeneMark_model.65365_t
Valid prediction for Augustus_model.g25505.t1
Valid prediction for GeneMark_model.65358_t
Valid prediction for GlimmerHMM_glimmerT_38041-T1
Valid prediction for snap_scaffold_15-snap.2665-T1
Valid prediction for Augustus_model.g25504.t1
Valid prediction for Augustus_model.g25514.t1
Valid prediction for GeneMark_model.65379_t
Valid prediction for snap_scaffold_15-snap.2670-T1
Valid prediction for snap_scaffold_15-snap.2657-T1
Valid prediction for HiQ_model.g25498.t1
Valid prediction for GeneMark_model.65351_t
Valid prediction for Augustus_model.g25500.t1
Valid prediction for snap_scaffold_15-snap.2668-T1
Valid prediction for snap_scaffold_15-snap.2674-T1
Valid prediction for snap_scaffold_15-snap.2685-T1
Valid prediction for HiQ_model.g25493.t1
Valid prediction for HiQ_model.g25503.t1
Valid prediction for snap_scaffold_15-snap.2653-T1
Valid prediction for GlimmerHMM_glimmerT_38042-T1
Valid prediction for snap_scaffold_15-snap.2654-T1
Valid prediction for Augustus_model.g25506.t1
Valid prediction for snap_scaffold_15-snap.2644-T1
Valid prediction for Augustus_model.g25518.t1
Valid prediction for pasa_asmbl_14571.p1
Valid prediction for GeneMark_model.65377_t
Valid prediction for Augustus_model.g25501.t1
Valid prediction for GlimmerHMM_glimmerT_38038-T1
Valid prediction for snap_scaffold_15-snap.2694-T1
Valid prediction for Augustus_model.g25488.t1
Valid prediction for GlimmerHMM_glimmerT_38024-T1
Valid prediction for GeneMark_model.65383_t
Valid prediction for snap_scaffold_15-snap.2673-T1
Valid prediction for Augustus_model.g25516.t1
Couldn't classify 167646, 167685
Couldn't classify 169736, 169804
Sorry, prediction pasa_asmbl_14569.p1 fails validation.
(AAG)	 AG	167646-167685	GT	TGG
(AAA)	 AG	168408-168547	GT	AGG
(ATA)	 AG	169099-169160	GT	TGG
(CTC)	 AG	169343-169445	GT	AGG
(ATT)	 AG	169736-169804	CT	AGC
-recovered pasa_asmbl_14569.p1, internal, 167646, 167685
-recovered pasa_asmbl_14569.p1, internal, 168408, 168547
-recovered pasa_asmbl_14569.p1, internal, 169099, 169160
-recovered pasa_asmbl_14569.p1, internal, 169343, 169445
Valid prediction for Augustus_model.g25497.t1
Valid prediction for GlimmerHMM_glimmerT_38023-T1
Valid prediction for GlimmerHMM_glimmerT_38028-T1
Valid prediction for GlimmerHMM_glimmerT_38056-T1
Valid prediction for GeneMark_model.65370_t
Valid prediction for snap_scaffold_15-snap.2691-T1
Valid prediction for GeneMark_model.65366_t
Valid prediction for Augustus_model.g25512.t1
Valid prediction for snap_scaffold_15-snap.2686-T1
Valid prediction for snap_scaffold_15-snap.2652-T1
Valid prediction for snap_scaffold_15-snap.2675-T1
Couldn't classify 140093, 140137
Couldn't classify 141314, 141386
Sorry, prediction pasa_asmbl_14837.p1 fails validation.
(CTC)	 TG	140093-140137	GT	TGG
(GCT)	 AG	140265-140382	GT	AGG
(GTG)	 AG	140570-140661	GT	AGG
(TTG)	 AG	140941-141035	GT	AGG
(GTA)	 AG	141314-141386	CA	CGC
-recovered pasa_asmbl_14837.p1, internal, 140265, 140382
-recovered pasa_asmbl_14837.p1, internal, 140570, 140661
-recovered pasa_asmbl_14837.p1, internal, 140941, 141035
Valid prediction for snap_scaffold_15-snap.2651-T1
Valid prediction for Augustus_model.g25495.t1
Valid prediction for GeneMark_model.65349_t
Valid prediction for GeneMark_model.65348_t
Valid prediction for snap_scaffold_15-snap.2658-T1
Couldn't classify 25592, 25735
Sorry, prediction pasa_asmbl_14861.p2 fails validation.
(GAG)	 AG	25592-25735	GT	CGG
(CTG)	 AG	26031-26189	GA	GAG
-recovered pasa_asmbl_14861.p2, terminal, 26031, 26189
-recovered pasa_asmbl_14861.p2, internal, 25592, 25735
Valid prediction for snap_scaffold_15-snap.2672-T1
Valid prediction for GeneMark_model.65378_t
Valid prediction for GlimmerHMM_glimmerT_38054-T1
Valid prediction for snap_scaffold_15-snap.2645-T1
Valid prediction for snap_scaffold_15-snap.2677-T1
Valid prediction for GlimmerHMM_glimmerT_38025-T1
Valid prediction for snap_scaffold_15-snap.2671-T1
Valid prediction for Augustus_model.g25513.t1
Valid prediction for GeneMark_model.65357_t
Valid prediction for Augustus_model.g25515.t1
Valid prediction for snap_scaffold_15-snap.2666-T1
Sorry, intron length (3) is less than minimum required (10)
Valid prediction for GeneMark_model.65380_t
Valid prediction for Augustus_model.g25492.t1
Valid prediction for GlimmerHMM_glimmerT_38043-T1
Valid prediction for GeneMark_model.65369_t
Valid prediction for GlimmerHMM_glimmerT_38052-T1
Valid prediction for GeneMark_model.65362_t
Couldn't classify 134879, 134938
Sorry, prediction pasa_asmbl_14567.p1 fails validation.
(ATG)	 AC	134373-134669	GT	CGG
(GAA)	 AG	134879-134938	GA	GGG
-recovered pasa_asmbl_14567.p1, initial, 134373, 134669
Valid prediction for snap_scaffold_15-snap.2664-T1
Couldn't classify 170179, 170247
Sorry, prediction pasa_asmbl_14570.p1 fails validation.
(TTG)	 GT	170179-170247	GT	ACG
(GGG)	 AG	170396-170503	GT	AGG
(GAG)	 AG	170684-170754	GT	GGG
(AGT)	 AG	170854-170977	GT	AGG
(GGC)	 AG	171192-171356	GT	AGG
(GAC)	 AG	171493-171595	GT	AAG
(TCC)	 AG	171854-172006	GT	TGG
(AGT)	 AG	172124-172645	GT	AGG
(ATA)	 AG	173028-173083	GG	GAG
-recovered pasa_asmbl_14570.p1, terminal, 171493, 171595
-recovered pasa_asmbl_14570.p1, terminal, 173028, 173083
-recovered pasa_asmbl_14570.p1, internal, 170396, 170503
-recovered pasa_asmbl_14570.p1, internal, 170684, 170754
-recovered pasa_asmbl_14570.p1, internal, 170854, 170977
-recovered pasa_asmbl_14570.p1, internal, 171192, 171356
-recovered pasa_asmbl_14570.p1, internal, 171493, 171595
-recovered pasa_asmbl_14570.p1, internal, 171854, 172006
-recovered pasa_asmbl_14570.p1, internal, 172124, 172645
Couldn't classify 201430, 201508
Couldn't classify 203524, 203577
Sorry, prediction pasa_asmbl_14584.p1 fails validation.
(GGT)	 AC	201430-201508	GT	TCG
(AAT)	 AG	201979-202090	GT	AGG
(GGA)	 AG	202580-202706	GT	TGG
(ACT)	 AG	203202-203333	GT	AAG
(GAT)	 AG	203524-203577	CC	ACC
-recovered pasa_asmbl_14584.p1, internal, 201979, 202090
-recovered pasa_asmbl_14584.p1, internal, 202580, 202706
-recovered pasa_asmbl_14584.p1, internal, 203202, 203333
Valid prediction for snap_scaffold_15-snap.2655-T1
Valid prediction for GlimmerHMM_glimmerT_38045-T1
Valid prediction for Augustus_model.g25502.t1
Valid prediction for GlimmerHMM_glimmerT_38022-T1
Valid prediction for snap_scaffold_15-snap.2676-T1
Valid prediction for snap_scaffold_15-snap.2690-T1
Valid prediction for snap_scaffold_15-snap.2643-T1
Valid prediction for snap_scaffold_15-snap.2688-T1
Couldn't classify 101442, 101484
Sorry, prediction pasa_asmbl_14565.p1 fails validation.
(GGC)	 AA	101442-101484	GT	TGG
(TAA)	 AG	101925-102021	GT	AGG
(ACA)	 AG	102207-102406	GT	TGG
(CCC)	 AG	103015-103190	GT	AGG
(GAG)	 AG	103473-103625	GT	GGG
(TAT)	 AG	104203-104350	GT	AGG
(GGA)	 AG	105315-105452	GT	TGG
(TGG)	 AG	106087-106179	GT	AGG
(AGA)	 AG	108215-108327	GT	AGG
(GGT)	 AG	109160-109286	GT	AGG
(GTT)	 AG	109715-109842	GT	TGG
(AAC)	 AG	110103-110166	GT	AGG
(GGG)	 AG	110298-110419	GT	AGG
(ATG)	 AG	111158-111337	TC	AGT
-recovered pasa_asmbl_14565.p1, terminal, 111158, 111337
-recovered pasa_asmbl_14565.p1, internal, 101925, 102021
-recovered pasa_asmbl_14565.p1, internal, 102207, 102406
-recovered pasa_asmbl_14565.p1, internal, 103015, 103190
-recovered pasa_asmbl_14565.p1, internal, 103473, 103625
-recovered pasa_asmbl_14565.p1, internal, 104203, 104350
-recovered pasa_asmbl_14565.p1, internal, 105315, 105452
-recovered pasa_asmbl_14565.p1, internal, 106087, 106179
-recovered pasa_asmbl_14565.p1, internal, 108215, 108327
-recovered pasa_asmbl_14565.p1, internal, 109160, 109286
-recovered pasa_asmbl_14565.p1, internal, 109715, 109842
-recovered pasa_asmbl_14565.p1, internal, 110103, 110166
-recovered pasa_asmbl_14565.p1, internal, 110298, 110419
Valid prediction for GeneMark_model.65350_t
Valid prediction for GlimmerHMM_glimmerT_38037-T1
Valid prediction for snap_scaffold_15-snap.2667-T1
Valid prediction for snap_scaffold_15-snap.2689-T1
Valid prediction for GlimmerHMM_glimmerT_38033-T1
Valid prediction for GlimmerHMM_glimmerT_38053-T1
Valid prediction for GlimmerHMM_glimmerT_38051-T1
Valid prediction for GlimmerHMM_glimmerT_38050-T1
Valid prediction for GeneMark_model.65346_t
Valid prediction for snap_scaffold_15-snap.2660-T1
Valid prediction for GeneMark_model.65381_t
Valid prediction for snap_scaffold_15-snap.2661-T1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for GeneMark_model.65368_t
Valid prediction for GlimmerHMM_glimmerT_38047-T1
Valid prediction for GlimmerHMM_glimmerT_38044-T1
Couldn't classify 245113, 245300
Sorry, prediction pasa_asmbl_15642.p1 fails validation.
(TCT)	 CG	245113-245300	GT	CCG
(AGA)	 AG	245407-245523	GT	AGG
(CAC)	 AG	245785-245910	GT	AGG
(GTT)	 AG	246072-246122	GT	AGG
(AGC)	 AG	246279-246373	GT	CAG
(TTG)	 AG	246508-246629	GT	AGG
(AAT)	 AG	247262-247353	GT	AGG
(GAT)	 AG	247484-247573	GT	AGG
(TGA)	 AG	247925-248127	GT	TGG
(GGT)	 AG	248533-248624	GT	AGG
(GTG)	 AG	248902-248938	GT	AGG
(GCT)	 AG	249115-249164	GT	TGG
(TCG)	 AG	249263-249315	GT	TGG
(GTA)	 AG	249550-249626	GT	AGG
(TGC)	 AG	250025-250140	GT	AGG
(TAT)	 AG	250457-250528	TT	GAT
-recovered pasa_asmbl_15642.p1, terminal, 250457, 250528
-recovered pasa_asmbl_15642.p1, internal, 245407, 245523
-recovered pasa_asmbl_15642.p1, internal, 245785, 245910
-recovered pasa_asmbl_15642.p1, internal, 246072, 246122
-recovered pasa_asmbl_15642.p1, internal, 246279, 246373
-recovered pasa_asmbl_15642.p1, internal, 246508, 246629
-recovered pasa_asmbl_15642.p1, internal, 247262, 247353
-recovered pasa_asmbl_15642.p1, internal, 247484, 247573
-recovered pasa_asmbl_15642.p1, internal, 247925, 248127
-recovered pasa_asmbl_15642.p1, internal, 248533, 248624
-recovered pasa_asmbl_15642.p1, internal, 248902, 248938
-recovered pasa_asmbl_15642.p1, internal, 249115, 249164
-recovered pasa_asmbl_15642.p1, internal, 249263, 249315
-recovered pasa_asmbl_15642.p1, internal, 249550, 249626
-recovered pasa_asmbl_15642.p1, internal, 250025, 250140
Valid prediction for GlimmerHMM_glimmerT_38035-T1
Valid prediction for Augustus_model.g25490.t1
Valid prediction for GeneMark_model.65353_t
Valid prediction for GlimmerHMM_glimmerT_38030-T1
Valid prediction for GlimmerHMM_glimmerT_38039-T1
Valid prediction for Augustus_model.g25510.t1
Couldn't classify 8298, 10268
Sorry, prediction pasa_asmbl_15652.p1 fails validation.
(CAC)	 CC	8298-10268	GA	GAG
Valid prediction for GlimmerHMM_glimmerT_38031-T1
Valid prediction for snap_scaffold_15-snap.2650-T1
Valid prediction for snap_scaffold_15-snap.2659-T1
Valid prediction for CodingQuarry_transcript_18154-T1
Valid prediction for GlimmerHMM_glimmerT_38029-T1
Couldn't classify 117441, 117953
Sorry, prediction pasa_asmbl_15651.p1 fails validation.
(GAG)	 TA	117441-117953	TC	TGT
Valid prediction for GeneMark_model.65374_t
Valid prediction for snap_scaffold_15-snap.2693-T1
Valid prediction for GeneMark_model.65367_t
Valid prediction for snap_scaffold_15-snap.2683-T1
Valid prediction for GlimmerHMM_glimmerT_38048-T1
Valid prediction for snap_scaffold_15-snap.2646-T1
Valid prediction for pasa_asmbl_15643.p1
Valid prediction for Augustus_model.g25508.t1
Couldn't classify 118728, 118950
Couldn't classify 119105, 119406
Sorry, prediction pasa_asmbl_15650.p1 fails validation.
(AGA)	 CC	118728-118950	GT	AGG
(GTA)	 AG	119105-119406	CG	GGC
Valid prediction for GeneMark_model.65363_t
Valid prediction for GlimmerHMM_glimmerT_38027-T1
Valid prediction for snap_scaffold_15-snap.2648-T1
Valid prediction for snap_scaffold_15-snap.2680-T1
Valid prediction for GeneMark_model.65375_t
Valid prediction for snap_scaffold_15-snap.2678-T1
Valid prediction for snap_scaffold_15-snap.2692-T1
Sorry, intron length (8) is less than minimum required (10)
Valid prediction for GlimmerHMM_glimmerT_38049-T1
Valid prediction for Augustus_model.g25507.t1
Valid prediction for HiQ_model.g25494.t1
Valid prediction for Augustus_model.g25517.t1
Valid prediction for snap_scaffold_15-snap.2647-T1
Couldn't classify 214239, 214341
Sorry, prediction pasa_asmbl_15645.p1 fails validation.
(AGA)	 CG	214239-214341	GT	AGG
(AGG)	 AG	215047-215236	GT	AAG
(AAA)	 AG	215520-215666	GT	GGG
(GTA)	 AG	215916-216249	GT	AGG
(TAT)	 AG	216459-216561	GT	AGG
(GTC)	 AG	216852-216912	GT	TGG
(GTT)	 AG	217055-217130	GT	AGG
(GAA)	 AG	217262-217339	GT	AGG
(GTT)	 AG	217503-217601	GT	AGG
(GCT)	 AG	217830-217883	GT	AGG
(TGT)	 AG	217982-218062	GT	AAG
(GAG)	 AG	218234-218320	GA	AGG
-recovered pasa_asmbl_15645.p1, terminal, 218234, 218320
-recovered pasa_asmbl_15645.p1, internal, 215047, 215236
-recovered pasa_asmbl_15645.p1, internal, 215520, 215666
-recovered pasa_asmbl_15645.p1, internal, 215916, 216249
-recovered pasa_asmbl_15645.p1, internal, 216459, 216561
-recovered pasa_asmbl_15645.p1, internal, 216852, 216912
-recovered pasa_asmbl_15645.p1, internal, 217055, 217130
-recovered pasa_asmbl_15645.p1, internal, 217262, 217339
-recovered pasa_asmbl_15645.p1, internal, 217503, 217601
-recovered pasa_asmbl_15645.p1, internal, 217830, 217883
-recovered pasa_asmbl_15645.p1, internal, 217982, 218062
Valid prediction for GeneMark_model.65361_t
Valid prediction for GeneMark_model.65373_t
Valid prediction for GlimmerHMM_glimmerT_38036-T1
Valid prediction for GeneMark_model.65359_t
Valid prediction for GeneMark_model.65352_t
Valid prediction for GlimmerHMM_glimmerT_38032-T1
Valid prediction for snap_scaffold_15-snap.2681-T1
Valid prediction for snap_scaffold_15-snap.2682-T1
Valid prediction for snap_scaffold_15-snap.2679-T1
Valid prediction for GeneMark_model.65360_t
Valid prediction for HiQ_model.g25496.t1
Valid prediction for GeneMark_model.65354_t
Valid prediction for CodingQuarry_transcript_18153-T1
Valid prediction for Augustus_model.g25511.t1
Valid prediction for GeneMark_model.65376_t
Valid prediction for Augustus_model.g25489.t1
Valid prediction for snap_scaffold_15-snap.2662-T1
Valid prediction for GlimmerHMM_glimmerT_38055-T1
Valid prediction for GlimmerHMM_glimmerT_38021-T1
Valid prediction for snap_scaffold_15-snap.2656-T1
Valid prediction for GlimmerHMM_glimmerT_38034-T1
Valid prediction for GlimmerHMM_glimmerT_38046-T1
Valid prediction for HiQ_model.g25499.t1
Valid prediction for snap_scaffold_15-snap.2649-T1
Valid prediction for snap_scaffold_15-snap.2684-T1
Valid prediction for GeneMark_model.65356_t
Couldn't classify 119581, 120045
Sorry, prediction pasa_asmbl_15649.p1 fails validation.
(CTT)	 AT	119581-120045	GC	GAG
Valid prediction for Augustus_model.g25491.t1
Valid prediction for snap_scaffold_15-snap.2669-T1
Valid prediction for Augustus_model.g25509.t1
Valid prediction for GeneMark_model.65347_t
Valid prediction for GeneMark_model.65355_t

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 195024, rend_intergenic: 192888  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 333031, rend_intergenic: 327284  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 362434
-exon list size: 607


building trellis

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35.5    
35.6    
35.8    
36.0    
36.1    
36.3    
36.5    
36.6    
36.8    
36.9    
37.1    
37.3    
37.4    
37.6    
37.8    
37.9    
38.1    
38.3    
38.4    
38.6    
38.8    
38.9    
39.1    
39.2    
39.4    
39.6    
39.7    
39.9    
40.1    
40.2    
40.4    
40.6    
40.7    
40.9    
41.1    
41.2    
41.4    
41.5    
41.7    
41.9    
42.0    
42.2    
42.4    
42.5    
42.7    
42.9    
43.0    
43.2    
43.3    
43.5    
43.7    
43.8    
44.0    
44.2    
44.3    
44.5    
44.7    
44.8    
45.0    
45.2    
45.3    
45.5    
45.6    
45.8    
46.0    
46.1    
46.3    
46.5    
46.6    
46.8    
47.0    
47.1    
47.3    
47.5    
47.6    
47.8    
47.9    
48.1    
48.3    
48.4    
48.6    
48.8    
48.9    
49.1    
49.3    
49.4    
49.6    
49.8    
49.9    
50.1    
50.2    
50.4    
50.6    
50.7    
50.9    
51.1    
51.2    
51.4    
51.6    
51.7    
51.9    
52.1    
52.2    
52.4    
52.5    
52.7    
52.9    
53.0    
53.2    
53.4    
53.5    
53.7    
53.9    
54.0    
54.2    
54.4    
54.5    
54.7    
54.8    
55.0    
55.2    
55.3    
55.5    
55.7    
55.8    
56.0    
56.2    
56.3    
56.5    
56.7    
56.8    
57.0    
57.1    
57.3    
57.5    
57.6    
57.8    
58.0    
58.1    
58.3    
58.5    
58.6    
58.8    
58.9    
59.1    
59.3    
59.4    
59.6    
59.8    
59.9    
60.1    
60.3    
60.4    
60.6    
60.8    
60.9    
61.1    
61.2    
61.4    
61.6    
61.7    
61.9    
62.1    
62.2    
62.4    
62.6    
62.7    
62.9    
63.1    
63.2    
63.4    
63.5    
63.7    
63.9    
64.0    
64.2    
64.4    
64.5    
64.7    
64.9    
65.0    
65.2    
65.4    
65.5    
65.7    
65.8    
66.0    
66.2    
66.3    
66.5    
66.7    
66.8    
67.0    
67.2    
67.3    
67.5    
67.7    
67.8    
68.0    
68.1    
68.3    
68.5    
68.6    
68.8    
69.0    
69.1    
69.3    
69.5    
69.6    
69.8    
70.0    
70.1    
70.3    
70.4    
70.6    
70.8    
70.9    
71.1    
71.3    
71.4    
71.6    
71.8    
71.9    
72.1    
72.2    
72.4    
72.6    
72.7    
72.9    
73.1    
73.2    
73.4    
73.6    
73.7    
73.9    
74.1    
74.2    
74.4    
74.5    
74.7    
74.9    
75.0    
75.2    
75.4    
75.5    
75.7    
75.9    
76.0    
76.2    
76.4    
76.5    
76.7    
76.8    
77.0    
77.2    
77.3    
77.5    
77.7    
77.8    
78.0    
78.2    
78.3    
78.5    
78.7    
78.8    
79.0    
79.1    
79.3    
79.5    
79.6    
79.8    
80.0    
80.1    
80.3    
80.5    
80.6    
80.8    
81.0    
81.1    
81.3    
81.4    
81.6    
81.8    
81.9    
82.1    
82.3    
82.4    
82.6    
82.8    
82.9    
83.1    
83.3    
83.4    
83.6    
83.7    
83.9    
84.1    
84.2    
84.4    
84.6    
84.7    
84.9    
85.1    
85.2    
85.4    
85.6    
85.7    
85.9    
86.0    
86.2    
86.4    
86.5    
86.7    
86.9    
87.0    
87.2    
87.4    
87.5    
87.7    
87.8    
88.0    
88.2    
88.3    
88.5    
88.7    
88.8    
89.0    
89.2    
89.3    
89.5    
89.7    
89.8    
90.0    
90.1    
90.3    
90.5    
90.6    
90.8    
91.0    
91.1    
91.3    
91.5    
91.6    
91.8    
92.0    
92.1    
92.3    
92.4    
92.6    
92.8    
92.9    
93.1    
93.3    
93.4    
93.6    
93.8    
93.9    
94.1    
94.3    
94.4    
94.6    
94.7    
94.9    
95.1    
95.2    
95.4    
95.6    
95.7    
95.9    
96.1    
96.2    
96.4    
96.6    
96.7    
96.9    
97.0    
97.2    
97.4    
97.5    
97.7    
97.9    
98.0    
98.2    
98.4    
98.5    
98.7    
98.9    
99.0    
99.2    
99.3    
99.5    
99.7    
99.8    
-found 44 predictions from path traversal
Error with prediction: snap lend_intergenic: 195024, rend_intergenic: 192888  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 333031, rend_intergenic: 327284  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 41 predictions persist after filtering for low support

-building DP trellis

-building trellis in range 1 - 10043
-exon list size: 9


building trellis

9.1    
18.2    
27.3    
36.4    
45.5    
54.5    
63.6    
72.7    
81.8    
90.9    
-found 1 predictions from path traversal

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support