-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_15/scaffold_15_11295381-11580333 -reading genomic sequence. ** Processing features (+) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: +) -loading gene prediction evidence. (strand: +)Valid prediction for snap_scaffold_15-snap.2336-T1 Valid prediction for GeneMark_model.65028_t Valid prediction for GlimmerHMM_glimmerT_37786-T1 Valid prediction for Augustus_model.g25324.t1 Valid prediction for snap_scaffold_15-snap.2347-T1 Valid prediction for snap_scaffold_15-snap.2374-T1 Valid prediction for snap_scaffold_15-snap.2370-T1 Valid prediction for snap_scaffold_15-snap.2325-T1 Valid prediction for GlimmerHMM_glimmerT_37801-T1 Valid prediction for GlimmerHMM_glimmerT_37768-T1 Valid prediction for GeneMark_model.65074_t Valid prediction for pasa_asmbl_14444.p1 Valid prediction for GeneMark_model.65034_t Valid prediction for GeneMark_model.65059_t Valid prediction for snap_scaffold_15-snap.2353-T1 Valid prediction for GlimmerHMM_glimmerT_37803-T1 Valid prediction for snap_scaffold_15-snap.2333-T1 Valid prediction for GeneMark_model.65077_t Valid prediction for GeneMark_model.65032_t Valid prediction for snap_scaffold_15-snap.2328-T1 Valid prediction for GlimmerHMM_glimmerT_37773-T1 Valid prediction for GeneMark_model.65072_t Valid prediction for GlimmerHMM_glimmerT_37777-T1 Valid prediction for snap_scaffold_15-snap.2339-T1 Valid prediction for GlimmerHMM_glimmerT_37774-T1 Valid prediction for snap_scaffold_15-snap.2351-T1 Valid prediction for Augustus_model.g25331.t1 Valid prediction for snap_scaffold_15-snap.2331-T1 Valid prediction for snap_scaffold_15-snap.2363-T1 Valid prediction for GeneMark_model.65023_t Couldn't classify 140869, 141225 Sorry, prediction pasa_asmbl_15527.p1 fails validation. (ATG) TC 140869-141225 CT AGC Valid prediction for snap_scaffold_15-snap.2364-T1 Valid prediction for GlimmerHMM_glimmerT_37761-T1 Valid prediction for Augustus_model.g25328.t1 Valid prediction for Augustus_model.g25340.t1 Valid prediction for GeneMark_model.65037_t Valid prediction for GeneMark_model.65089_t Valid prediction for GeneMark_model.65052_t Valid prediction for GeneMark_model.65043_t Valid prediction for GeneMark_model.65045_t Valid prediction for snap_scaffold_15-snap.2380-T1 Valid prediction for snap_scaffold_15-snap.2373-T1 Valid prediction for GeneMark_model.65087_t Valid prediction for Augustus_model.g25329.t1 Valid prediction for GeneMark_model.65017_t Valid prediction for GeneMark_model.65082_t Valid prediction for snap_scaffold_15-snap.2326-T1 Valid prediction for GeneMark_model.65075_t Valid prediction for GeneMark_model.65047_t Valid prediction for GeneMark_model.65049_t Valid prediction for GeneMark_model.65068_t Valid prediction for GeneMark_model.65085_t Valid prediction for GeneMark_model.65024_t Valid prediction for GlimmerHMM_glimmerT_37790-T1 Valid prediction for GeneMark_model.65036_t Valid prediction for snap_scaffold_15-snap.2366-T1 Valid prediction for CodingQuarry_transcript_18104-T1 Valid prediction for GeneMark_model.65062_t Valid prediction for GeneMark_model.65091_t Valid prediction for snap_scaffold_15-snap.2369-T1 Valid prediction for GlimmerHMM_glimmerT_37804-T1 Valid prediction for GlimmerHMM_glimmerT_37760-T1 Valid prediction for HiQ_model.g25317.t1 Valid prediction for GlimmerHMM_glimmerT_37770-T1 Valid prediction for snap_scaffold_15-snap.2342-T1 Valid prediction for GeneMark_model.65026_t Valid prediction for Augustus_model.g25333.t1 Valid prediction for GlimmerHMM_glimmerT_37793-T1 Valid prediction for snap_scaffold_15-snap.2338-T1 Valid prediction for GeneMark_model.65064_t Valid prediction for GeneMark_model.65057_t Valid prediction for Augustus_model.g25334.t1 Valid prediction for snap_scaffold_15-snap.2329-T1 Valid prediction for GeneMark_model.65054_t Valid prediction for GlimmerHMM_glimmerT_37775-T1 Valid prediction for GeneMark_model.65061_t Valid prediction for snap_scaffold_15-snap.2357-T1 Valid prediction for GeneMark_model.65021_t Valid prediction for GeneMark_model.65039_t Valid prediction for HiQ_model.g25335.t1 Valid prediction for Augustus_model.g25318.t1 Valid prediction for snap_scaffold_15-snap.2350-T1 Valid prediction for GeneMark_model.65066_t Valid prediction for snap_scaffold_15-snap.2360-T1 Valid prediction for snap_scaffold_15-snap.2379-T1 Valid prediction for GeneMark_model.65080_t Valid prediction for snap_scaffold_15-snap.2341-T1 Valid prediction for GlimmerHMM_glimmerT_37787-T1 Valid prediction for GeneMark_model.65070_t Couldn't classify 8896, 9016 Couldn't classify 9537, 9711 Couldn't classify 10080, 10140 Sorry, prediction pasa_asmbl_14435.p1 fails validation. (ATG) GA 2116-2285 GT AGG (GAA) AG 5250-5313 GT AGG (AAA) AG 5770-5880 GT AGG (AAA) AG 6114-6174 GT CCG (ACG) AG 6628-6752 GT AGG (GTC) AG 7039-7106 GT GAG (CGT) AG 7882-7984 GT AGG (GTT) AG 8615-8725 GT GGG (GAC) AG 8896-9016 AT AAA (CGC) AC 9537-9711 GT AAG (CGT) AG 10080-10140 TT TGT -recovered pasa_asmbl_14435.p1, initial, 2116, 2285 add_exon() Sorry, pasa_asmbl_14435.p1 7039-7106-terminal-2 is invalid. -recovered pasa_asmbl_14435.p1, terminal, 7039, 7106 -recovered pasa_asmbl_14435.p1, internal, 5250, 5313 -recovered pasa_asmbl_14435.p1, internal, 5770, 5880 -recovered pasa_asmbl_14435.p1, internal, 6114, 6174 -recovered pasa_asmbl_14435.p1, internal, 6628, 6752 -recovered pasa_asmbl_14435.p1, internal, 7039, 7106 -recovered pasa_asmbl_14435.p1, internal, 7882, 7984 -recovered pasa_asmbl_14435.p1, internal, 8615, 8725 Valid prediction for GlimmerHMM_glimmerT_37795-T1 Valid prediction for snap_scaffold_15-snap.2323-T1 Valid prediction for snap_scaffold_15-snap.2355-T1 Valid prediction for GlimmerHMM_glimmerT_37784-T1 Valid prediction for GeneMark_model.65083_t -loading the search evidence (protein and EST search results, strand: +) -scoring exons (strand: +) ** Processing features (-) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: -) -loading gene prediction evidence. (strand: -)Valid prediction for GeneMark_model.65060_t Valid prediction for GeneMark_model.65088_t Valid prediction for snap_scaffold_15-snap.2354-T1 Valid prediction for snap_scaffold_15-snap.2340-T1 Valid prediction for GlimmerHMM_glimmerT_37797-T1 Valid prediction for Augustus_model.g25322.t1 Valid prediction for GlimmerHMM_glimmerT_37771-T1 Valid prediction for GeneMark_model.65063_t Valid prediction for GeneMark_model.65035_t Valid prediction for GeneMark_model.65079_t Valid prediction for GeneMark_model.65069_t Valid prediction for snap_scaffold_15-snap.2332-T1 Valid prediction for snap_scaffold_15-snap.2371-T1 Valid prediction for GeneMark_model.65044_t Valid prediction for GeneMark_model.65065_t Valid prediction for GlimmerHMM_glimmerT_37800-T1 Valid prediction for GeneMark_model.65053_t Valid prediction for GeneMark_model.65073_t Valid prediction for GlimmerHMM_glimmerT_37785-T1 Valid prediction for GeneMark_model.65090_t Valid prediction for snap_scaffold_15-snap.2358-T1 Valid prediction for Augustus_model.g25326.t1 Valid prediction for Augustus_model.g25338.t1 Valid prediction for snap_scaffold_15-snap.2377-T1 Couldn't classify 13362, 13468 Sorry, prediction pasa_asmbl_15538.p1 fails validation. (GCT) CA 13362-13468 GT AGG (CCT) AG 13649-13890 GT AGG (GCC) AG 14402-14567 GT AGG (AGG) AG 14707-14824 GT AGG (GCG) AG 15585-15731 GT AGG (GTG) AG 15841-15915 GT AGG (GAC) AG 16037-16154 GT CGG (ATT) AG 16745-16813 GT AGG (ACC) AG 16935-17039 GT AGG (GCA) AG 17525-17615 GT AAG (TGT) AG 17756-17864 GT CTG (GTA) AG 18021-18121 GT AAG (GTG) AG 20131-20275 GT AGG (ATT) AG 20804-20815 CG AAC add_exon() Sorry, pasa_asmbl_15538.p1 13649-13890-terminal-2 is invalid. -recovered pasa_asmbl_15538.p1, terminal, 13649, 13890 -recovered pasa_asmbl_15538.p1, terminal, 20804, 20815 -recovered pasa_asmbl_15538.p1, internal, 13649, 13890 -recovered pasa_asmbl_15538.p1, internal, 14402, 14567 -recovered pasa_asmbl_15538.p1, internal, 14707, 14824 -recovered pasa_asmbl_15538.p1, internal, 15585, 15731 -recovered pasa_asmbl_15538.p1, internal, 15841, 15915 -recovered pasa_asmbl_15538.p1, internal, 16037, 16154 -recovered pasa_asmbl_15538.p1, internal, 16745, 16813 -recovered pasa_asmbl_15538.p1, internal, 16935, 17039 -recovered pasa_asmbl_15538.p1, internal, 17525, 17615 -recovered pasa_asmbl_15538.p1, internal, 17756, 17864 -recovered pasa_asmbl_15538.p1, internal, 18021, 18121 -recovered pasa_asmbl_15538.p1, internal, 20131, 20275 Valid prediction for GlimmerHMM_glimmerT_37791-T1 Valid prediction for GlimmerHMM_glimmerT_37805-T1 Valid prediction for GlimmerHMM_glimmerT_37772-T1 Valid prediction for GeneMark_model.65031_t Valid prediction for snap_scaffold_15-snap.2362-T1 Couldn't classify 75782, 75971 Couldn't classify 76176, 76306 Sorry, prediction CodingQuarry_transcript_18107-T1 fails validation. (ATG) GA 75078-75133 GT CAG (CCC) AG 75379-75454 GT CTG (CCC) AG 75782-75971 TG GGT (AGA) GG 76176-76306 GT AGG (TTG) AG 77118-77354 GT AGG (TAC) AG 77512-77607 GT TGG (CCT) AG 77810-77965 GT TTG (ACT) AG 78081-78170 GT TGG (ACG) AG 78300-78467 GA AGG -recovered CodingQuarry_transcript_18107-T1, initial, 75078, 75133 -recovered CodingQuarry_transcript_18107-T1, terminal, 78300, 78467 -recovered CodingQuarry_transcript_18107-T1, internal, 75379, 75454 -recovered CodingQuarry_transcript_18107-T1, internal, 77118, 77354 -recovered CodingQuarry_transcript_18107-T1, internal, 77512, 77607 -recovered CodingQuarry_transcript_18107-T1, internal, 77810, 77965 -recovered CodingQuarry_transcript_18107-T1, internal, 78081, 78170 Valid prediction for Augustus_model.g25320.t1 Valid prediction for GlimmerHMM_glimmerT_37778-T1 Couldn't classify 265718, 266104 Sorry, prediction pasa_asmbl_15509.p1 fails validation. (CTC) CC 265718-266104 CA CTC Valid prediction for GeneMark_model.65067_t Valid prediction for snap_scaffold_15-snap.2346-T1 Valid prediction for snap_scaffold_15-snap.2365-T1 Valid prediction for Augustus_model.g25339.t1 Valid prediction for GlimmerHMM_glimmerT_37762-T1 Valid prediction for Augustus_model.g25325.t1 Valid prediction for snap_scaffold_15-snap.2368-T1 Valid prediction for GeneMark_model.65084_t Valid prediction for Augustus_model.g25332.t1 Valid prediction for snap_scaffold_15-snap.2359-T1 Valid prediction for GlimmerHMM_glimmerT_37802-T1 Valid prediction for GeneMark_model.65071_t Valid prediction for GeneMark_model.65019_t Valid prediction for GlimmerHMM_glimmerT_37776-T1 Valid prediction for snap_scaffold_15-snap.2327-T1 Valid prediction for GeneMark_model.65058_t Valid prediction for GlimmerHMM_glimmerT_37789-T1 Valid prediction for GeneMark_model.65050_t Valid prediction for CodingQuarry_transcript_18105-T1 Valid prediction for snap_scaffold_15-snap.2335-T1 Valid prediction for snap_scaffold_15-snap.2343-T1 Valid prediction for CodingQuarry_transcript_18106-T1 Valid prediction for Augustus_model.g25323.t1 Valid prediction for snap_scaffold_15-snap.2324-T1 Valid prediction for GeneMark_model.65020_t Valid prediction for GlimmerHMM_glimmerT_37806-T1 Valid prediction for GeneMark_model.65086_t Valid prediction for GeneMark_model.65038_t Valid prediction for GeneMark_model.65022_t Valid prediction for GlimmerHMM_glimmerT_37764-T1 Valid prediction for snap_scaffold_15-snap.2344-T1 Valid prediction for GeneMark_model.65056_t Valid prediction for GlimmerHMM_glimmerT_37794-T1 Valid prediction for GlimmerHMM_glimmerT_37780-T1 Valid prediction for GeneMark_model.65025_t Valid prediction for CodingQuarry_transcript_18102-T1 Valid prediction for snap_scaffold_15-snap.2375-T1 Valid prediction for GlimmerHMM_glimmerT_37781-T1 Valid prediction for GeneMark_model.65055_t Valid prediction for snap_scaffold_15-snap.2349-T1 Valid prediction for GeneMark_model.65029_t Valid prediction for pasa_asmbl_15532.p1 Valid prediction for GeneMark_model.65046_t Valid prediction for HiQ_model.g25343.t1 Couldn't classify 22582, 22641 Couldn't classify 25582, 25710 Sorry, prediction pasa_asmbl_15536.p1 fails validation. (TCA) AC 22582-22641 GT AGG (GTG) AG 23190-23337 GT AGG (GGA) AG 23852-24007 GT GGG (CTG) AG 24218-24367 GT CGG (GCA) AG 24561-24817 GT AGG (GGC) AG 25178-25339 GT AGG (GTG) AG 25582-25710 GT GCG -recovered pasa_asmbl_15536.p1, internal, 23190, 23337 -recovered pasa_asmbl_15536.p1, internal, 23852, 24007 -recovered pasa_asmbl_15536.p1, internal, 24218, 24367 -recovered pasa_asmbl_15536.p1, internal, 24561, 24817 -recovered pasa_asmbl_15536.p1, internal, 25178, 25339 -recovered pasa_asmbl_15536.p1, internal, 25582, 25710 Valid prediction for GlimmerHMM_glimmerT_37769-T1 Valid prediction for GlimmerHMM_glimmerT_37766-T1 Valid prediction for snap_scaffold_15-snap.2367-T1 Valid prediction for GeneMark_model.65042_t Valid prediction for GlimmerHMM_glimmerT_37796-T1 Valid prediction for HiQ_model.g25327.t1 Valid prediction for snap_scaffold_15-snap.2376-T1 Couldn't classify 110718, 111059 Sorry, prediction pasa_asmbl_15531.p2 fails validation. (ATG) TC 110718-111059 GA TGG Valid prediction for snap_scaffold_15-snap.2334-T1 Valid prediction for GeneMark_model.65040_t Valid prediction for GeneMark_model.65018_t Valid prediction for GeneMark_model.65078_t Valid prediction for snap_scaffold_15-snap.2337-T1 Valid prediction for CodingQuarry_transcript_18103-T1 Valid prediction for GeneMark_model.65051_t Valid prediction for GlimmerHMM_glimmerT_37788-T1 Valid prediction for GlimmerHMM_glimmerT_37782-T1 Valid prediction for GeneMark_model.65041_t Valid prediction for GlimmerHMM_glimmerT_37767-T1 Valid prediction for GeneMark_model.65027_t Valid prediction for HiQ_model.g25341.t1 Valid prediction for snap_scaffold_15-snap.2330-T1 Valid prediction for GlimmerHMM_glimmerT_37765-T1 Valid prediction for snap_scaffold_15-snap.2378-T1 Valid prediction for GeneMark_model.65048_t Valid prediction for snap_scaffold_15-snap.2348-T1 Sorry, intron length (9) is less than minimum required (10) Valid prediction for pasa_asmbl_15518.p1 Valid prediction for GeneMark_model.65081_t Valid prediction for GlimmerHMM_glimmerT_37798-T1 Couldn't classify 266198, 266395 Sorry, prediction pasa_asmbl_15508.p1 fails validation. (GGT) GG 266198-266395 GT GGG (ACG) AG 267630-267767 GT GGG (TGT) AG 268781-268999 GT AGG (GTG) AG 269748-269876 GT AGG (GAG) AG 270452-270686 GT CTG (CGT) AG 270847-271010 GT AGG (AGG) AG 271159-271287 CC GAC -recovered pasa_asmbl_15508.p1, terminal, 271159, 271287 -recovered pasa_asmbl_15508.p1, internal, 267630, 267767 -recovered pasa_asmbl_15508.p1, internal, 268781, 268999 -recovered pasa_asmbl_15508.p1, internal, 269748, 269876 -recovered pasa_asmbl_15508.p1, internal, 270452, 270686 -recovered pasa_asmbl_15508.p1, internal, 270847, 271010 Valid prediction for GlimmerHMM_glimmerT_37783-T1 Valid prediction for GlimmerHMM_glimmerT_37779-T1 Valid prediction for GeneMark_model.65030_t Valid prediction for GlimmerHMM_glimmerT_37763-T1 Valid prediction for Augustus_model.g25330.t1 Couldn't classify 179905, 179993 Sorry, prediction pasa_asmbl_15514.p1 fails validation. (AAC) CC 179905-179993 GT GGG (CAT) AG 180788-180961 GT AAG (GCA) AG 181136-181184 GT AGG (GCG) AG 181321-181486 GT TGG (CCA) AG 181647-181852 AG GAA -recovered pasa_asmbl_15514.p1, terminal, 181647, 181852 -recovered pasa_asmbl_15514.p1, internal, 180788, 180961 -recovered pasa_asmbl_15514.p1, internal, 181136, 181184 -recovered pasa_asmbl_15514.p1, internal, 181321, 181486 Valid prediction for Augustus_model.g25321.t1 Valid prediction for snap_scaffold_15-snap.2361-T1 Valid prediction for GeneMark_model.65033_t Valid prediction for snap_scaffold_15-snap.2372-T1 Valid prediction for Augustus_model.g25319.t1 Couldn't classify 6617, 6738 Sorry, prediction pasa_asmbl_15541.p1 fails validation. (ATG) AA 4459-4501 GT AGG (ACT) AG 5267-5332 GT AGG (CGG) AG 5491-5622 GT GGG (GCA) AG 6141-6392 GT AGG (GAG) AG 6617-6738 CT AAC -recovered pasa_asmbl_15541.p1, initial, 4459, 4501 -recovered pasa_asmbl_15541.p1, internal, 5267, 5332 -recovered pasa_asmbl_15541.p1, internal, 5491, 5622 -recovered pasa_asmbl_15541.p1, internal, 6141, 6392 Valid prediction for GlimmerHMM_glimmerT_37792-T1 Valid prediction for GeneMark_model.65092_t Valid prediction for GeneMark_model.65093_t Valid prediction for snap_scaffold_15-snap.2356-T1 Valid prediction for Augustus_model.g25337.t1 Valid prediction for GlimmerHMM_glimmerT_37799-T1 Valid prediction for HiQ_model.g25342.t1 Valid prediction for snap_scaffold_15-snap.2352-T1 Valid prediction for GeneMark_model.65016_t Valid prediction for HiQ_model.g25336.t1 Valid prediction for snap_scaffold_15-snap.2345-T1 -loading the search evidence (protein and EST search results, strand: -) -scoring exons (strand: -)Error with prediction: snap lend_intergenic: 9081, rend_intergenic: 3287 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 17906, rend_intergenic: 13667 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 25860, rend_intergenic: 19262 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 27942, rend_intergenic: 26490 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 33993, rend_intergenic: 27990 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 43991, rend_intergenic: 38812 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 77965, rend_intergenic: 75534 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 117046, rend_intergenic: 111319 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 131047, rend_intergenic: 121354 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 145262, rend_intergenic: 134350 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 168791, rend_intergenic: 161281 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 184471, rend_intergenic: 176176 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 209217, rend_intergenic: 206487 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 226114, rend_intergenic: 212853 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 244282, rend_intergenic: 226146 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 253709, rend_intergenic: 247085 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 260457, rend_intergenic: 254004 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 276349, rend_intergenic: 269181 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: GlimmerHMM lend_intergenic: 154492, rend_intergenic: 154489 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -building DP trellis -building trellis in range 1 - 284953 -exon list size: 1075 building trellis 0.1 0.2 0.3 0.4 0.5 0.6 0.6 0.7 0.8 0.9 1.0 1.1 1.2 1.3 1.4 1.5 1.6 1.7 1.8 1.9 1.9 2.0 2.1 2.2 2.3 2.4 2.5 2.6 2.7 2.8 2.9 3.0 3.1 3.2 3.2 3.3 3.4 3.5 3.6 3.7 3.8 3.9 4.0 4.1 4.2 4.3 4.4 4.5 4.5 4.6 4.7 4.8 4.9 5.0 5.1 5.2 5.3 5.4 5.5 5.6 5.7 5.8 5.8 5.9 6.0 6.1 6.2 6.3 6.4 6.5 6.6 6.7 6.8 6.9 7.0 7.1 7.1 7.2 7.3 7.4 7.5 7.6 7.7 7.8 7.9 8.0 8.1 8.2 8.3 8.4 8.4 8.5 8.6 8.7 8.8 8.9 9.0 9.1 9.2 9.3 9.4 9.5 9.6 9.7 9.7 9.8 9.9 10.0 10.1 10.2 10.3 10.4 10.5 10.6 10.7 10.8 10.9 11.0 11.0 11.1 11.2 11.3 11.4 11.5 11.6 11.7 11.8 11.9 12.0 12.1 12.2 12.3 12.3 12.4 12.5 12.6 12.7 12.8 12.9 13.0 13.1 13.2 13.3 13.4 13.5 13.6 13.6 13.7 13.8 13.9 14.0 14.1 14.2 14.3 14.4 14.5 14.6 14.7 14.8 14.9 14.9 15.0 15.1 15.2 15.3 15.4 15.5 15.6 15.7 15.8 15.9 16.0 16.1 16.2 16.2 16.3 16.4 16.5 16.6 16.7 16.8 16.9 17.0 17.1 17.2 17.3 17.4 17.5 17.5 17.6 17.7 17.8 17.9 18.0 18.1 18.2 18.3 18.4 18.5 18.6 18.7 18.8 18.8 18.9 19.0 19.1 19.2 19.3 19.4 19.5 19.6 19.7 19.8 19.9 20.0 20.1 20.1 20.2 20.3 20.4 20.5 20.6 20.7 20.8 20.9 21.0 21.1 21.2 21.3 21.4 21.4 21.5 21.6 21.7 21.8 21.9 22.0 22.1 22.2 22.3 22.4 22.5 22.6 22.7 22.7 22.8 22.9 23.0 23.1 23.2 23.3 23.4 23.5 23.6 23.7 23.8 23.9 24.0 24.0 24.1 24.2 24.3 24.4 24.5 24.6 24.7 24.8 24.9 25.0 25.1 25.2 25.3 25.3 25.4 25.5 25.6 25.7 25.8 25.9 26.0 26.1 26.2 26.3 26.4 26.5 26.6 26.6 26.7 26.8 26.9 27.0 27.1 27.2 27.3 27.4 27.5 27.6 27.7 27.8 27.9 27.9 28.0 28.1 28.2 28.3 28.4 28.5 28.6 28.7 28.8 28.9 29.0 29.1 29.2 29.2 29.3 29.4 29.5 29.6 29.7 29.8 29.9 30.0 30.1 30.2 30.3 30.4 30.5 30.5 30.6 30.7 30.8 30.9 31.0 31.1 31.2 31.3 31.4 31.5 31.6 31.7 31.8 31.8 31.9 32.0 32.1 32.2 32.3 32.4 32.5 32.6 32.7 32.8 32.9 33.0 33.1 33.1 33.2 33.3 33.4 33.5 33.6 33.7 33.8 33.9 34.0 34.1 34.2 34.3 34.4 34.4 34.5 34.6 34.7 34.8 34.9 35.0 35.1 35.2 35.3 35.4 35.5 35.6 35.7 35.7 35.8 35.9 36.0 36.1 36.2 36.3 36.4 36.5 36.6 36.7 36.8 36.9 37.0 37.0 37.1 37.2 37.3 37.4 37.5 37.6 37.7 37.8 37.9 38.0 38.1 38.2 38.3 38.3 38.4 38.5 38.6 38.7 38.8 38.9 39.0 39.1 39.2 39.3 39.4 39.5 39.6 39.6 39.7 39.8 39.9 40.0 40.1 40.2 40.3 40.4 40.5 40.6 40.7 40.8 40.9 40.9 41.0 41.1 41.2 41.3 41.4 41.5 41.6 41.7 41.8 41.9 42.0 42.1 42.2 42.2 42.3 42.4 42.5 42.6 42.7 42.8 42.9 43.0 43.1 43.2 43.3 43.4 43.5 43.5 43.6 43.7 43.8 43.9 44.0 44.1 44.2 44.3 44.4 44.5 44.6 44.7 44.8 44.8 44.9 45.0 45.1 45.2 45.3 45.4 45.5 45.6 45.7 45.8 45.9 46.0 46.1 46.1 46.2 46.3 46.4 46.5 46.6 46.7 46.8 46.9 47.0 47.1 47.2 47.3 47.4 47.4 47.5 47.6 47.7 47.8 47.9 48.0 48.1 48.2 48.3 48.4 48.5 48.6 48.7 48.7 48.8 48.9 49.0 49.1 49.2 49.3 49.4 49.5 49.6 49.7 49.8 49.9 50.0 50.0 50.1 50.2 50.3 50.4 50.5 50.6 50.7 50.8 50.9 51.0 51.1 51.2 51.3 51.3 51.4 51.5 51.6 51.7 51.8 51.9 52.0 52.1 52.2 52.3 52.4 52.5 52.6 52.6 52.7 52.8 52.9 53.0 53.1 53.2 53.3 53.4 53.5 53.6 53.7 53.8 53.9 53.9 54.0 54.1 54.2 54.3 54.4 54.5 54.6 54.7 54.8 54.9 55.0 55.1 55.2 55.2 55.3 55.4 55.5 55.6 55.7 55.8 55.9 56.0 56.1 56.2 56.3 56.4 56.5 56.5 56.6 56.7 56.8 56.9 57.0 57.1 57.2 57.3 57.4 57.5 57.6 57.7 57.8 57.8 57.9 58.0 58.1 58.2 58.3 58.4 58.5 58.6 58.7 58.8 58.9 59.0 59.1 59.1 59.2 59.3 59.4 59.5 59.6 59.7 59.8 59.9 60.0 60.1 60.2 60.3 60.4 60.4 60.5 60.6 60.7 60.8 60.9 61.0 61.1 61.2 61.3 61.4 61.5 61.6 61.7 61.7 61.8 61.9 62.0 62.1 62.2 62.3 62.4 62.5 62.6 62.7 62.8 62.9 63.0 63.0 63.1 63.2 63.3 63.4 63.5 63.6 63.7 63.8 63.9 64.0 64.1 64.2 64.3 64.3 64.4 64.5 64.6 64.7 64.8 64.9 65.0 65.1 65.2 65.3 65.4 65.5 65.6 65.6 65.7 65.8 65.9 66.0 66.1 66.2 66.3 66.4 66.5 66.6 66.7 66.8 66.9 66.9 67.0 67.1 67.2 67.3 67.4 67.5 67.6 67.7 67.8 67.9 68.0 68.1 68.2 68.2 68.3 68.4 68.5 68.6 68.7 68.8 68.9 69.0 69.1 69.2 69.3 69.4 69.5 69.5 69.6 69.7 69.8 69.9 70.0 70.1 70.2 70.3 70.4 70.5 70.6 70.7 70.8 70.8 70.9 71.0 71.1 71.2 71.3 71.4 71.5 71.6 71.7 71.8 71.9 72.0 72.1 72.1 72.2 72.3 72.4 72.5 72.6 72.7 72.8 72.9 73.0 73.1 73.2 73.3 73.4 73.4 73.5 73.6 73.7 73.8 73.9 74.0 74.1 74.2 74.3 74.4 74.5 74.6 74.7 74.7 74.8 74.9 75.0 75.1 75.2 75.3 75.4 75.5 75.6 75.7 75.8 75.9 76.0 76.0 76.1 76.2 76.3 76.4 76.5 76.6 76.7 76.8 76.9 77.0 77.1 77.2 77.3 77.3 77.4 77.5 77.6 77.7 77.8 77.9 78.0 78.1 78.2 78.3 78.4 78.5 78.6 78.6 78.7 78.8 78.9 79.0 79.1 79.2 79.3 79.4 79.5 79.6 79.7 79.8 79.9 79.9 80.0 80.1 80.2 80.3 80.4 80.5 80.6 80.7 80.8 80.9 81.0 81.1 81.2 81.2 81.3 81.4 81.5 81.6 81.7 81.8 81.9 82.0 82.1 82.2 82.3 82.4 82.5 82.5 82.6 82.7 82.8 82.9 83.0 83.1 83.2 83.3 83.4 83.5 83.6 83.7 83.8 83.8 83.9 84.0 84.1 84.2 84.3 84.4 84.5 84.6 84.7 84.8 84.9 85.0 85.1 85.1 85.2 85.3 85.4 85.5 85.6 85.7 85.8 85.9 86.0 86.1 86.2 86.3 86.4 86.4 86.5 86.6 86.7 86.8 86.9 87.0 87.1 87.2 87.3 87.4 87.5 87.6 87.7 87.7 87.8 87.9 88.0 88.1 88.2 88.3 88.4 88.5 88.6 88.7 88.8 88.9 89.0 89.0 89.1 89.2 89.3 89.4 89.5 89.6 89.7 89.8 89.9 90.0 90.1 90.2 90.3 90.3 90.4 90.5 90.6 90.7 90.8 90.9 91.0 91.1 91.2 91.3 91.4 91.5 91.6 91.6 91.7 91.8 91.9 92.0 92.1 92.2 92.3 92.4 92.5 92.6 92.7 92.8 92.9 92.9 93.0 93.1 93.2 93.3 93.4 93.5 93.6 93.7 93.8 93.9 94.0 94.1 94.2 94.2 94.3 94.4 94.5 94.6 94.7 94.8 94.9 95.0 95.1 95.2 95.3 95.4 95.5 95.5 95.6 95.7 95.8 95.9 96.0 96.1 96.2 96.3 96.4 96.5 96.6 96.7 96.8 96.8 96.9 97.0 97.1 97.2 97.3 97.4 97.5 97.6 97.7 97.8 97.9 98.0 98.1 98.1 98.2 98.3 98.4 98.5 98.6 98.7 98.8 98.9 99.0 99.1 99.2 99.3 99.4 99.4 99.5 99.6 99.7 99.8 99.9 -found 56 predictions from path traversal Error with prediction: snap lend_intergenic: 9081, rend_intergenic: 3287 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 17906, rend_intergenic: 13667 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 25860, rend_intergenic: 19262 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 27942, rend_intergenic: 26490 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 33993, rend_intergenic: 27990 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 43991, rend_intergenic: 38812 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 77965, rend_intergenic: 75534 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 117046, rend_intergenic: 111319 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 131047, rend_intergenic: 121354 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 145262, rend_intergenic: 134350 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 168791, rend_intergenic: 161281 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 184471, rend_intergenic: 176176 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 209217, rend_intergenic: 206487 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 226114, rend_intergenic: 212853 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 244282, rend_intergenic: 226146 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 253709, rend_intergenic: 247085 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 260457, rend_intergenic: 254004 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 276349, rend_intergenic: 269181 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: GlimmerHMM lend_intergenic: 154492, rend_intergenic: 154489 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -reporting highest scoring path thru the trellis. -found 31 predictions persist after filtering for low support