-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_1452

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Couldn't classify 964, 1108
Couldn't classify 1551, 1584
Sorry, prediction GeneMark_model.109350_t fails validation.
(GCC)	 AG	964-1108	GT	ATG
(GGG)	 AG	1551-1584	GT	AGG
-recovered GeneMark_model.109350_t, internal, 964, 1108
-recovered GeneMark_model.109350_t, internal, 1551, 1584
Couldn't classify 848, 926
Couldn't classify 964, 1108
Sorry, prediction snap_scaffold_1452-snap.1-T1 fails validation.
(GGA)	 AG	848-926	GT	AGG
(GCC)	 AG	964-1108	GT	ATG
-recovered snap_scaffold_1452-snap.1-T1, terminal, 848, 926
-recovered snap_scaffold_1452-snap.1-T1, internal, 848, 926
-recovered snap_scaffold_1452-snap.1-T1, internal, 964, 1108

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)
-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 2401
-exon list size: 4


building trellis

16.7    
33.3    
50.0    
66.7    
83.3    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support