-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_1443

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Couldn't classify 832, 852
Couldn't classify 2180, 2200
Sorry, prediction GeneMark_model.109343_t fails validation.
(AAA)	 AG	832-852	GT	GAG
(GGA)	 AG	997-1035	GT	AGG
(GAG)	 AG	1061-1180	GT	CGG
(TTA)	 AG	2097-2156	GT	AAG
(GGG)	 AG	2180-2200	GT	CAG
-recovered GeneMark_model.109343_t, internal, 832, 852
-recovered GeneMark_model.109343_t, internal, 997, 1035
-recovered GeneMark_model.109343_t, internal, 1061, 1180
-recovered GeneMark_model.109343_t, internal, 2097, 2156
-recovered GeneMark_model.109343_t, internal, 2180, 2200

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)
-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 2413
-exon list size: 13


building trellis

6.7    
13.3    
20.0    
26.7    
33.3    
40.0    
46.7    
53.3    
60.0    
66.7    
73.3    
80.0    
86.7    
93.3    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support