-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_1424

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for snap_scaffold_1424-snap.1-T1
Valid prediction for GlimmerHMM_glimmerT_62638-T1
Couldn't classify 2103, 2248
Sorry, prediction GeneMark_model.109322_t fails validation.
(ATG)	 AG	482-527	GT	CGG
(AGC)	 AG	714-800	GT	CGG
(CTG)	 AG	2103-2248	GT	TGG
-recovered GeneMark_model.109322_t, initial, 482, 527
-recovered GeneMark_model.109322_t, internal, 482, 527
-recovered GeneMark_model.109322_t, internal, 714, 800
-recovered GeneMark_model.109322_t, internal, 2103, 2248
Valid prediction for Augustus_model.g41670.t1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)
-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 2444
-exon list size: 9


building trellis

9.1    
18.2    
27.3    
36.4    
45.5    
54.5    
63.6    
72.7    
81.8    
90.9    
-found 1 predictions from path traversal

-reporting highest scoring path thru the trellis.
-found 1 predictions persist after filtering for low support