-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_14/scaffold_14_8036240-8255564 -reading genomic sequence. ** Processing features (+) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: +) -loading gene prediction evidence. (strand: +)Valid prediction for GeneMark_model.59998_t Valid prediction for snap_scaffold_14-snap.1677-T1 Valid prediction for Augustus_model.g23540.t1 Valid prediction for GlimmerHMM_glimmerT_35017-T1 Valid prediction for snap_scaffold_14-snap.1687-T1 Valid prediction for snap_scaffold_14-snap.1680-T1 Valid prediction for GeneMark_model.60015_t Couldn't classify 1564, 1597 Sorry, prediction pasa_asmbl_12179.p1 fails validation. (CAG) GG 1564-1597 GT TGG (GTG) AG 1713-1806 GT AGG (CAC) AG 2035-2159 GT TGG (GGA) AG 3067-3124 GT AAG (AAA) AG 3342-3494 GT AGG (GGT) AG 3629-3683 GT ATG (AGT) AG 3803-3933 GT CGG (AGC) AG 4046-4102 GT TTG (AAT) AG 4338-4344 GT AGG -recovered pasa_asmbl_12179.p1, terminal, 4338, 4344 -recovered pasa_asmbl_12179.p1, internal, 1713, 1806 -recovered pasa_asmbl_12179.p1, internal, 2035, 2159 -recovered pasa_asmbl_12179.p1, internal, 3067, 3124 -recovered pasa_asmbl_12179.p1, internal, 3342, 3494 -recovered pasa_asmbl_12179.p1, internal, 3629, 3683 -recovered pasa_asmbl_12179.p1, internal, 3803, 3933 -recovered pasa_asmbl_12179.p1, internal, 4046, 4102 -recovered pasa_asmbl_12179.p1, internal, 4338, 4344 Valid prediction for GeneMark_model.60027_t Valid prediction for snap_scaffold_14-snap.1671-T1 Valid prediction for Augustus_model.g23537.t1 Valid prediction for snap_scaffold_14-snap.1691-T1 Valid prediction for snap_scaffold_14-snap.1696-T1 Valid prediction for GeneMark_model.60034_t Valid prediction for Augustus_model.g23551.t1 Valid prediction for Augustus_model.g23538.t1 Valid prediction for GlimmerHMM_glimmerT_35019-T1 Valid prediction for GlimmerHMM_glimmerT_35026-T1 Valid prediction for GlimmerHMM_glimmerT_35021-T1 Valid prediction for GeneMark_model.60014_t Valid prediction for GeneMark_model.60025_t Valid prediction for GlimmerHMM_glimmerT_35023-T1 Valid prediction for snap_scaffold_14-snap.1674-T1 Valid prediction for GlimmerHMM_glimmerT_35032-T1 Valid prediction for GeneMark_model.60009_t Valid prediction for HiQ_model.g23561.t1 Valid prediction for GeneMark_model.60044_t Valid prediction for snap_scaffold_14-snap.1705-T1 Valid prediction for snap_scaffold_14-snap.1689-T1 Valid prediction for GeneMark_model.59994_t Valid prediction for GeneMark_model.60023_t Valid prediction for GeneMark_model.60007_t Valid prediction for GeneMark_model.60017_t Valid prediction for snap_scaffold_14-snap.1667-T1 Valid prediction for Augustus_model.g23549.t1 Valid prediction for GeneMark_model.60011_t Valid prediction for GlimmerHMM_glimmerT_35037-T1 Valid prediction for GeneMark_model.60032_t Valid prediction for GlimmerHMM_glimmerT_35039-T1 Valid prediction for snap_scaffold_14-snap.1694-T1 Valid prediction for snap_scaffold_14-snap.1670-T1 Couldn't classify 7113, 7162 Sorry, prediction pasa_asmbl_12181.p1 fails validation. (ATG) GT 5799-5912 GT AGG (GCA) AG 6002-6094 GT AGG (CTG) AG 6181-6345 GT AGG (GAC) AG 6443-6614 GT AGG (GAG) AG 6735-6950 GT AGG (AGT) AG 7113-7162 AG GCA -recovered pasa_asmbl_12181.p1, initial, 5799, 5912 -recovered pasa_asmbl_12181.p1, internal, 6002, 6094 -recovered pasa_asmbl_12181.p1, internal, 6181, 6345 -recovered pasa_asmbl_12181.p1, internal, 6443, 6614 -recovered pasa_asmbl_12181.p1, internal, 6735, 6950 Valid prediction for pasa_asmbl_12191.p1 Valid prediction for snap_scaffold_14-snap.1710-T1 Couldn't classify 8011, 8090 Sorry, prediction pasa_asmbl_12182.p1 fails validation. (GTG) GT 8011-8090 GT GTG (GCA) AG 9278-9345 GT TGG (ACG) AG 9440-9588 GT AGG (AAA) AG 9825-9996 GT GGG (GTA) AG 10081-10194 GT GAG (CAG) AG 10293-10472 GT AGG (GTC) AG 10788-10913 GT GGG (GTG) AG 11280-11398 GG GAG -recovered pasa_asmbl_12182.p1, terminal, 11280, 11398 -recovered pasa_asmbl_12182.p1, internal, 9278, 9345 -recovered pasa_asmbl_12182.p1, internal, 9440, 9588 -recovered pasa_asmbl_12182.p1, internal, 9825, 9996 -recovered pasa_asmbl_12182.p1, internal, 10081, 10194 -recovered pasa_asmbl_12182.p1, internal, 10293, 10472 -recovered pasa_asmbl_12182.p1, internal, 10788, 10913 Valid prediction for CodingQuarry_transcript_15693-T1 Valid prediction for Augustus_model.g23546.t1 Valid prediction for snap_scaffold_14-snap.1707-T1 Valid prediction for snap_scaffold_14-snap.1690-T1 Valid prediction for GlimmerHMM_glimmerT_35038-T1 Valid prediction for GeneMark_model.60020_t Valid prediction for GlimmerHMM_glimmerT_35027-T1 Valid prediction for GeneMark_model.60041_t Valid prediction for GeneMark_model.59997_t Valid prediction for GeneMark_model.60000_t Valid prediction for GeneMark_model.60039_t Valid prediction for GeneMark_model.59992_t Valid prediction for snap_scaffold_14-snap.1666-T1 Valid prediction for GeneMark_model.59990_t Valid prediction for GlimmerHMM_glimmerT_35031-T1 Valid prediction for snap_scaffold_14-snap.1681-T1 Valid prediction for GlimmerHMM_glimmerT_35024-T1 Valid prediction for GeneMark_model.60005_t Valid prediction for Augustus_model.g23542.t1 Valid prediction for GlimmerHMM_glimmerT_35049-T1 Valid prediction for GeneMark_model.60029_t Valid prediction for Augustus_model.g23545.t1 Valid prediction for GeneMark_model.60021_t Valid prediction for GlimmerHMM_glimmerT_35034-T1 -loading the search evidence (protein and EST search results, strand: +) -scoring exons (strand: +) ** Processing features (-) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: -) -loading gene prediction evidence. (strand: -)Valid prediction for GeneMark_model.60038_t Couldn't classify 2867, 3208 Sorry, prediction pasa_asmbl_13255.p1 fails validation. (ATG) AG 2867-3208 AA ATA Couldn't classify 159608, 159727 Sorry, prediction pasa_asmbl_13232.p1 fails validation. (ACA) GC 159608-159727 GT GGG (GTA) AG 159834-160103 GC GAG -recovered pasa_asmbl_13232.p1, terminal, 159834, 160103 -recovered pasa_asmbl_13232.p1, internal, 159834, 160103 Valid prediction for Augustus_model.g23564.t1 Valid prediction for GeneMark_model.59989_t Valid prediction for GeneMark_model.60042_t Valid prediction for GeneMark_model.60006_t Valid prediction for GeneMark_model.60012_t Valid prediction for Augustus_model.g23539.t1 Valid prediction for CodingQuarry_transcript_15689-T1 Valid prediction for GlimmerHMM_glimmerT_35020-T1 Valid prediction for snap_scaffold_14-snap.1682-T1 Valid prediction for snap_scaffold_14-snap.1698-T1 Valid prediction for snap_scaffold_14-snap.1697-T1 Valid prediction for GlimmerHMM_glimmerT_35036-T1 Valid prediction for snap_scaffold_14-snap.1675-T1 Valid prediction for GeneMark_model.60004_t Valid prediction for GeneMark_model.60045_t Valid prediction for snap_scaffold_14-snap.1686-T1 Valid prediction for snap_scaffold_14-snap.1673-T1 Valid prediction for Augustus_model.g23565.t1 Valid prediction for HiQ_model.g23557.t1 Valid prediction for GeneMark_model.60033_t Valid prediction for GlimmerHMM_glimmerT_35045-T1 Valid prediction for CodingQuarry_transcript_15690-T1 Valid prediction for GeneMark_model.60013_t Valid prediction for Augustus_model.g23541.t1 Valid prediction for Augustus_model.g23562.t1 Valid prediction for snap_scaffold_14-snap.1679-T1 Valid prediction for HiQ_model.g23563.t1 Valid prediction for GlimmerHMM_glimmerT_35028-T1 Valid prediction for Augustus_model.g23553.t1 Valid prediction for pasa_asmbl_13245.p1 Valid prediction for GlimmerHMM_glimmerT_35040-T1 Valid prediction for GlimmerHMM_glimmerT_35051-T1 Valid prediction for GlimmerHMM_glimmerT_35030-T1 Valid prediction for GlimmerHMM_glimmerT_35047-T1 Valid prediction for snap_scaffold_14-snap.1708-T1 Valid prediction for GeneMark_model.60010_t Valid prediction for snap_scaffold_14-snap.1703-T1 Valid prediction for GeneMark_model.60002_t Valid prediction for snap_scaffold_14-snap.1683-T1 Valid prediction for snap_scaffold_14-snap.1699-T1 Valid prediction for GeneMark_model.60018_t Couldn't classify 183823, 183937 Sorry, prediction pasa_asmbl_13226.p1 fails validation. (ATG) AG 182964-183361 GT AGG (GGT) AG 183638-183730 GT AGG (AGA) AG 183823-183937 AT GCA -recovered pasa_asmbl_13226.p1, initial, 182964, 183361 -recovered pasa_asmbl_13226.p1, internal, 182964, 183361 -recovered pasa_asmbl_13226.p1, internal, 183638, 183730 Valid prediction for HiQ_model.g23559.t1 Valid prediction for snap_scaffold_14-snap.1702-T1 Valid prediction for GeneMark_model.60031_t Valid prediction for CodingQuarry_transcript_15691-T1 Valid prediction for snap_scaffold_14-snap.1692-T1 Valid prediction for Augustus_model.g23544.t1 Valid prediction for snap_scaffold_14-snap.1676-T1 Valid prediction for GeneMark_model.60019_t Valid prediction for GlimmerHMM_glimmerT_35035-T1 Valid prediction for Augustus_model.g23555.t1 Valid prediction for snap_scaffold_14-snap.1706-T1 Valid prediction for snap_scaffold_14-snap.1688-T1 Sorry, intron length (9) is less than minimum required (10) Valid prediction for CodingQuarry_transcript_15694-T1 Valid prediction for CodingQuarry_transcript_15697-T1 Valid prediction for GlimmerHMM_glimmerT_35018-T1 Valid prediction for snap_scaffold_14-snap.1693-T1 Valid prediction for GeneMark_model.60026_t Valid prediction for Augustus_model.g23554.t1 Valid prediction for GlimmerHMM_glimmerT_35046-T1 Valid prediction for GeneMark_model.60030_t Valid prediction for GlimmerHMM_glimmerT_35048-T1 Valid prediction for snap_scaffold_14-snap.1704-T1 Valid prediction for GlimmerHMM_glimmerT_35044-T1 Valid prediction for pasa_asmbl_13243.p1 Valid prediction for Augustus_model.g23547.t1 Valid prediction for Augustus_model.g23543.t1 Valid prediction for GeneMark_model.60003_t Valid prediction for GlimmerHMM_glimmerT_35025-T1 Valid prediction for GeneMark_model.59996_t Valid prediction for snap_scaffold_14-snap.1701-T1 Couldn't classify 842, 1306 Sorry, prediction pasa_asmbl_13257.p1 fails validation. (TCA) AA 842-1306 GG CAG Couldn't classify 3537, 3666 Couldn't classify 5776, 5796 Sorry, prediction pasa_asmbl_13253.p1 fails validation. (AGT) CC 3537-3666 GT TGG (CAG) AG 3775-3974 GT AGG (GGT) AG 4081-4149 GT TCG (GGA) AG 4284-4484 GT AGG (GGT) AG 5232-5360 GT AGG (GTG) AG 5776-5796 CA AGC -recovered pasa_asmbl_13253.p1, internal, 3775, 3974 -recovered pasa_asmbl_13253.p1, internal, 4081, 4149 -recovered pasa_asmbl_13253.p1, internal, 4284, 4484 -recovered pasa_asmbl_13253.p1, internal, 5232, 5360 Valid prediction for snap_scaffold_14-snap.1669-T1 Couldn't classify 13930, 14158 Couldn't classify 15112, 15126 Sorry, prediction pasa_asmbl_13250.p1 fails validation. (ATC) AG 13930-14158 GT CGG (AGC) AG 14449-14619 GT TTG (CTG) AG 14838-14986 GT TTG (GGG) AG 15112-15126 GC CAG -recovered pasa_asmbl_13250.p1, internal, 13930, 14158 -recovered pasa_asmbl_13250.p1, internal, 14449, 14619 -recovered pasa_asmbl_13250.p1, internal, 14838, 14986 -recovered pasa_asmbl_13250.p1, internal, 15112, 15126 Valid prediction for snap_scaffold_14-snap.1668-T1 Valid prediction for GeneMark_model.60037_t Valid prediction for GeneMark_model.59991_t Couldn't classify 45723, 45779 Sorry, prediction pasa_asmbl_13235.p1 fails validation. (CGT) CA 45723-45779 GT AGG (GTG) AG 46135-46271 GT ATG (TCC) AG 46500-46638 GT AGG (GTG) AG 47036-47184 GT AAG (GGA) AG 47584-47685 GT TGG (CAT) AG 48019-48112 GT TGG (AAA) AG 48224-48349 GT AGG (AAG) AG 48466-48588 GT AGG (ACA) AG 48740-48886 TG AAT -recovered pasa_asmbl_13235.p1, terminal, 48740, 48886 -recovered pasa_asmbl_13235.p1, internal, 46135, 46271 -recovered pasa_asmbl_13235.p1, internal, 46500, 46638 -recovered pasa_asmbl_13235.p1, internal, 47036, 47184 -recovered pasa_asmbl_13235.p1, internal, 47584, 47685 -recovered pasa_asmbl_13235.p1, internal, 48019, 48112 -recovered pasa_asmbl_13235.p1, internal, 48224, 48349 -recovered pasa_asmbl_13235.p1, internal, 48466, 48588 Couldn't classify 159608, 159727 Sorry, prediction pasa_asmbl_13229.p1 fails validation. (ACA) GC 159608-159727 GT GGG (GTA) AG 159834-160086 GT AGG (GCA) AG 161771-161850 AC GAA -recovered pasa_asmbl_13229.p1, terminal, 161771, 161850 -recovered pasa_asmbl_13229.p1, internal, 159834, 160086 Couldn't classify 6895, 7012 Couldn't classify 9035, 9464 Sorry, prediction pasa_asmbl_13252.p1 fails validation. (CCA) CA 6895-7012 GT AGG (AGT) AG 7305-7448 GT TGG (ATT) AG 7533-7625 GT AGG (CAA) AG 7933-8160 GT TGG (GCA) AG 8627-8697 GT AGG (ATT) AG 8785-8924 GT ATG (GTG) AG 9035-9464 GC GGG -recovered pasa_asmbl_13252.p1, internal, 7305, 7448 -recovered pasa_asmbl_13252.p1, internal, 7533, 7625 -recovered pasa_asmbl_13252.p1, internal, 7933, 8160 -recovered pasa_asmbl_13252.p1, internal, 8627, 8697 -recovered pasa_asmbl_13252.p1, internal, 8785, 8924 -recovered pasa_asmbl_13252.p1, internal, 9035, 9464 Valid prediction for GlimmerHMM_glimmerT_35050-T1 Valid prediction for snap_scaffold_14-snap.1700-T1 Valid prediction for GeneMark_model.60008_t Valid prediction for GeneMark_model.59999_t Valid prediction for Augustus_model.g23548.t1 Valid prediction for CodingQuarry_transcript_15698-T1 Valid prediction for GeneMark_model.59993_t Valid prediction for Augustus_model.g23552.t1 Valid prediction for GlimmerHMM_glimmerT_35041-T1 Valid prediction for GeneMark_model.60040_t Valid prediction for snap_scaffold_14-snap.1709-T1 Valid prediction for GeneMark_model.60024_t Valid prediction for snap_scaffold_14-snap.1695-T1 Sorry, intron length (9) is less than minimum required (10) Valid prediction for GlimmerHMM_glimmerT_35022-T1 Valid prediction for GeneMark_model.60043_t Couldn't classify 2081, 2461 Sorry, prediction pasa_asmbl_13256.p1 fails validation. (CAG) AG 2081-2461 GG GAG Valid prediction for GeneMark_model.60028_t Valid prediction for snap_scaffold_14-snap.1684-T1 Valid prediction for HiQ_model.g23560.t1 Valid prediction for snap_scaffold_14-snap.1665-T1 Valid prediction for CodingQuarry_transcript_15696-T1 Valid prediction for Augustus_model.g23550.t1 Valid prediction for snap_scaffold_14-snap.1711-T1 Valid prediction for HiQ_model.g23558.t1 Valid prediction for HiQ_model.g23556.t1 Valid prediction for GeneMark_model.60001_t Valid prediction for GlimmerHMM_glimmerT_35029-T1 Valid prediction for pasa_asmbl_13240.p1 Valid prediction for GeneMark_model.60022_t Valid prediction for snap_scaffold_14-snap.1678-T1 Valid prediction for GlimmerHMM_glimmerT_35033-T1 Couldn't classify 184171, 184521 Sorry, prediction pasa_asmbl_13225.p2 fails validation. (CTG) CC 184171-184521 GC CCG Valid prediction for snap_scaffold_14-snap.1672-T1 Valid prediction for GeneMark_model.60036_t Valid prediction for GlimmerHMM_glimmerT_35043-T1 Valid prediction for GeneMark_model.59995_t Valid prediction for GlimmerHMM_glimmerT_35042-T1 Valid prediction for snap_scaffold_14-snap.1685-T1 Valid prediction for GeneMark_model.60035_t Valid prediction for CodingQuarry_transcript_15688-T1 Valid prediction for GeneMark_model.60016_t Valid prediction for CodingQuarry_transcript_15695-T1 -loading the search evidence (protein and EST search results, strand: -) -scoring exons (strand: -)Error with prediction: GlimmerHMM lend_intergenic: 190586, rend_intergenic: 190583 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 22810, rend_intergenic: 20306 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 32598, rend_intergenic: 25977 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 47740, rend_intergenic: 41710 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 56374, rend_intergenic: 51737 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 61293, rend_intergenic: 56381 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 74715, rend_intergenic: 71840 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 92492, rend_intergenic: 77272 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 124198, rend_intergenic: 120911 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 143395, rend_intergenic: 131097 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 146169, rend_intergenic: 143740 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 153747, rend_intergenic: 148971 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 155324, rend_intergenic: 153909 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 165095, rend_intergenic: 155613 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 200865, rend_intergenic: 196778 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 215929, rend_intergenic: 209251 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -building DP trellis -building trellis in range 1 - 219325 -exon list size: 837 building trellis 0.1 0.2 0.4 0.5 0.6 0.7 0.8 1.0 1.1 1.2 1.3 1.4 1.5 1.7 1.8 1.9 2.0 2.1 2.3 2.4 2.5 2.6 2.7 2.9 3.0 3.1 3.2 3.3 3.5 3.6 3.7 3.8 3.9 4.1 4.2 4.3 4.4 4.5 4.6 4.8 4.9 5.0 5.1 5.2 5.4 5.5 5.6 5.7 5.8 6.0 6.1 6.2 6.3 6.4 6.6 6.7 6.8 6.9 7.0 7.2 7.3 7.4 7.5 7.6 7.7 7.9 8.0 8.1 8.2 8.3 8.5 8.6 8.7 8.8 8.9 9.1 9.2 9.3 9.4 9.5 9.7 9.8 9.9 10.0 10.1 10.3 10.4 10.5 10.6 10.7 10.8 11.0 11.1 11.2 11.3 11.4 11.6 11.7 11.8 11.9 12.0 12.2 12.3 12.4 12.5 12.6 12.8 12.9 13.0 13.1 13.2 13.3 13.5 13.6 13.7 13.8 13.9 14.1 14.2 14.3 14.4 14.5 14.7 14.8 14.9 15.0 15.1 15.3 15.4 15.5 15.6 15.7 15.9 16.0 16.1 16.2 16.3 16.4 16.6 16.7 16.8 16.9 17.0 17.2 17.3 17.4 17.5 17.6 17.8 17.9 18.0 18.1 18.2 18.4 18.5 18.6 18.7 18.8 19.0 19.1 19.2 19.3 19.4 19.5 19.7 19.8 19.9 20.0 20.1 20.3 20.4 20.5 20.6 20.7 20.9 21.0 21.1 21.2 21.3 21.5 21.6 21.7 21.8 21.9 22.1 22.2 22.3 22.4 22.5 22.6 22.8 22.9 23.0 23.1 23.2 23.4 23.5 23.6 23.7 23.8 24.0 24.1 24.2 24.3 24.4 24.6 24.7 24.8 24.9 25.0 25.1 25.3 25.4 25.5 25.6 25.7 25.9 26.0 26.1 26.2 26.3 26.5 26.6 26.7 26.8 26.9 27.1 27.2 27.3 27.4 27.5 27.7 27.8 27.9 28.0 28.1 28.2 28.4 28.5 28.6 28.7 28.8 29.0 29.1 29.2 29.3 29.4 29.6 29.7 29.8 29.9 30.0 30.2 30.3 30.4 30.5 30.6 30.8 30.9 31.0 31.1 31.2 31.3 31.5 31.6 31.7 31.8 31.9 32.1 32.2 32.3 32.4 32.5 32.7 32.8 32.9 33.0 33.1 33.3 33.4 33.5 33.6 33.7 33.8 34.0 34.1 34.2 34.3 34.4 34.6 34.7 34.8 34.9 35.0 35.2 35.3 35.4 35.5 35.6 35.8 35.9 36.0 36.1 36.2 36.4 36.5 36.6 36.7 36.8 36.9 37.1 37.2 37.3 37.4 37.5 37.7 37.8 37.9 38.0 38.1 38.3 38.4 38.5 38.6 38.7 38.9 39.0 39.1 39.2 39.3 39.5 39.6 39.7 39.8 39.9 40.0 40.2 40.3 40.4 40.5 40.6 40.8 40.9 41.0 41.1 41.2 41.4 41.5 41.6 41.7 41.8 42.0 42.1 42.2 42.3 42.4 42.6 42.7 42.8 42.9 43.0 43.1 43.3 43.4 43.5 43.6 43.7 43.9 44.0 44.1 44.2 44.3 44.5 44.6 44.7 44.8 44.9 45.1 45.2 45.3 45.4 45.5 45.6 45.8 45.9 46.0 46.1 46.2 46.4 46.5 46.6 46.7 46.8 47.0 47.1 47.2 47.3 47.4 47.6 47.7 47.8 47.9 48.0 48.2 48.3 48.4 48.5 48.6 48.7 48.9 49.0 49.1 49.2 49.3 49.5 49.6 49.7 49.8 49.9 50.1 50.2 50.3 50.4 50.5 50.7 50.8 50.9 51.0 51.1 51.3 51.4 51.5 51.6 51.7 51.8 52.0 52.1 52.2 52.3 52.4 52.6 52.7 52.8 52.9 53.0 53.2 53.3 53.4 53.5 53.6 53.8 53.9 54.0 54.1 54.2 54.4 54.5 54.6 54.7 54.8 54.9 55.1 55.2 55.3 55.4 55.5 55.7 55.8 55.9 56.0 56.1 56.3 56.4 56.5 56.6 56.7 56.9 57.0 57.1 57.2 57.3 57.4 57.6 57.7 57.8 57.9 58.0 58.2 58.3 58.4 58.5 58.6 58.8 58.9 59.0 59.1 59.2 59.4 59.5 59.6 59.7 59.8 60.0 60.1 60.2 60.3 60.4 60.5 60.7 60.8 60.9 61.0 61.1 61.3 61.4 61.5 61.6 61.7 61.9 62.0 62.1 62.2 62.3 62.5 62.6 62.7 62.8 62.9 63.1 63.2 63.3 63.4 63.5 63.6 63.8 63.9 64.0 64.1 64.2 64.4 64.5 64.6 64.7 64.8 65.0 65.1 65.2 65.3 65.4 65.6 65.7 65.8 65.9 66.0 66.2 66.3 66.4 66.5 66.6 66.7 66.9 67.0 67.1 67.2 67.3 67.5 67.6 67.7 67.8 67.9 68.1 68.2 68.3 68.4 68.5 68.7 68.8 68.9 69.0 69.1 69.2 69.4 69.5 69.6 69.7 69.8 70.0 70.1 70.2 70.3 70.4 70.6 70.7 70.8 70.9 71.0 71.2 71.3 71.4 71.5 71.6 71.8 71.9 72.0 72.1 72.2 72.3 72.5 72.6 72.7 72.8 72.9 73.1 73.2 73.3 73.4 73.5 73.7 73.8 73.9 74.0 74.1 74.3 74.4 74.5 74.6 74.7 74.9 75.0 75.1 75.2 75.3 75.4 75.6 75.7 75.8 75.9 76.0 76.2 76.3 76.4 76.5 76.6 76.8 76.9 77.0 77.1 77.2 77.4 77.5 77.6 77.7 77.8 77.9 78.1 78.2 78.3 78.4 78.5 78.7 78.8 78.9 79.0 79.1 79.3 79.4 79.5 79.6 79.7 79.9 80.0 80.1 80.2 80.3 80.5 80.6 80.7 80.8 80.9 81.0 81.2 81.3 81.4 81.5 81.6 81.8 81.9 82.0 82.1 82.2 82.4 82.5 82.6 82.7 82.8 83.0 83.1 83.2 83.3 83.4 83.6 83.7 83.8 83.9 84.0 84.1 84.3 84.4 84.5 84.6 84.7 84.9 85.0 85.1 85.2 85.3 85.5 85.6 85.7 85.8 85.9 86.1 86.2 86.3 86.4 86.5 86.7 86.8 86.9 87.0 87.1 87.2 87.4 87.5 87.6 87.7 87.8 88.0 88.1 88.2 88.3 88.4 88.6 88.7 88.8 88.9 89.0 89.2 89.3 89.4 89.5 89.6 89.7 89.9 90.0 90.1 90.2 90.3 90.5 90.6 90.7 90.8 90.9 91.1 91.2 91.3 91.4 91.5 91.7 91.8 91.9 92.0 92.1 92.3 92.4 92.5 92.6 92.7 92.8 93.0 93.1 93.2 93.3 93.4 93.6 93.7 93.8 93.9 94.0 94.2 94.3 94.4 94.5 94.6 94.8 94.9 95.0 95.1 95.2 95.4 95.5 95.6 95.7 95.8 95.9 96.1 96.2 96.3 96.4 96.5 96.7 96.8 96.9 97.0 97.1 97.3 97.4 97.5 97.6 97.7 97.9 98.0 98.1 98.2 98.3 98.5 98.6 98.7 98.8 98.9 99.0 99.2 99.3 99.4 99.5 99.6 99.8 99.9 -found 47 predictions from path traversal Error with prediction: GlimmerHMM lend_intergenic: 190586, rend_intergenic: 190583 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 22810, rend_intergenic: 20306 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 32598, rend_intergenic: 25977 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 47740, rend_intergenic: 41710 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 56374, rend_intergenic: 51737 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 61293, rend_intergenic: 56381 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 74715, rend_intergenic: 71840 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 92492, rend_intergenic: 77272 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 124198, rend_intergenic: 120911 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 143395, rend_intergenic: 131097 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 146169, rend_intergenic: 143740 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 153747, rend_intergenic: 148971 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 155324, rend_intergenic: 153909 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 165095, rend_intergenic: 155613 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 200865, rend_intergenic: 196778 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 215929, rend_intergenic: 209251 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. GOT 5prime partial gene. -reporting highest scoring path thru the trellis. -found 31 predictions persist after filtering for low support