-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_14/scaffold_14_6526434-6805155 -reading genomic sequence. ** Processing features (+) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: +) -loading gene prediction evidence. (strand: +)Valid prediction for Augustus_model.g23411.t1 Couldn't classify 253713, 254570 Sorry, prediction pasa_asmbl_12083.p1 fails validation. (GAA) AG 253713-254570 AC AGA Valid prediction for GlimmerHMM_glimmerT_34814-T1 Valid prediction for GeneMark_model.59615_t Valid prediction for snap_scaffold_14-snap.1364-T1 Valid prediction for GeneMark_model.59632_t Valid prediction for GeneMark_model.59628_t Valid prediction for CodingQuarry_transcript_15633-T1 Valid prediction for Augustus_model.g23408.t1 Valid prediction for snap_scaffold_14-snap.1393-T1 Valid prediction for snap_scaffold_14-snap.1380-T1 Valid prediction for snap_scaffold_14-snap.1399-T1 Valid prediction for Augustus_model.g23398.t1 Valid prediction for GlimmerHMM_glimmerT_34800-T1 Valid prediction for GlimmerHMM_glimmerT_34824-T1 Valid prediction for snap_scaffold_14-snap.1390-T1 Valid prediction for GlimmerHMM_glimmerT_34805-T1 Valid prediction for GeneMark_model.59613_t Valid prediction for Augustus_model.g23390.t1 Valid prediction for snap_scaffold_14-snap.1405-T1 Valid prediction for GlimmerHMM_glimmerT_34829-T1 Valid prediction for GeneMark_model.59638_t Couldn't classify 235903, 236188 Sorry, prediction pasa_asmbl_12081.p1 fails validation. (GCC) CC 235903-236188 GT AGG (ATG) AG 236602-236724 GT ACG (GAC) AG 236997-237151 AC AAA add_exon() Sorry, pasa_asmbl_12081.p1 236602-236724-initial-1 is invalid. -recovered pasa_asmbl_12081.p1, initial, 236602, 236724 -recovered pasa_asmbl_12081.p1, terminal, 236997, 237151 -recovered pasa_asmbl_12081.p1, internal, 236602, 236724 Valid prediction for GeneMark_model.59602_t Valid prediction for GlimmerHMM_glimmerT_34816-T1 Valid prediction for GeneMark_model.59619_t Valid prediction for snap_scaffold_14-snap.1373-T1 Valid prediction for pasa_asmbl_12071.p1 Valid prediction for snap_scaffold_14-snap.1359-T1 Valid prediction for GlimmerHMM_glimmerT_34810-T1 Valid prediction for Augustus_model.g23394.t1 Valid prediction for Augustus_model.g23396.t1 Valid prediction for GlimmerHMM_glimmerT_34822-T1 Valid prediction for GlimmerHMM_glimmerT_34803-T1 Valid prediction for snap_scaffold_14-snap.1397-T1 Valid prediction for snap_scaffold_14-snap.1389-T1 Valid prediction for HiQ_model.g23392.t1 Valid prediction for GeneMark_model.59635_t Valid prediction for snap_scaffold_14-snap.1382-T1 Valid prediction for CodingQuarry_transcript_15638-T1 Valid prediction for Augustus_model.g23395.t1 Valid prediction for GeneMark_model.59641_t Valid prediction for snap_scaffold_14-snap.1403-T1 Valid prediction for GeneMark_model.59633_t Valid prediction for GeneMark_model.59610_t Valid prediction for GeneMark_model.59630_t Valid prediction for pasa_asmbl_12063.p1 Valid prediction for GeneMark_model.59604_t Valid prediction for snap_scaffold_14-snap.1407-T1 Valid prediction for Augustus_model.g23409.t1 Valid prediction for CodingQuarry_transcript_15628-T1 Valid prediction for snap_scaffold_14-snap.1369-T1 Valid prediction for GlimmerHMM_glimmerT_34818-T1 Valid prediction for CodingQuarry_transcript_15629-T1 Valid prediction for GeneMark_model.59608_t Valid prediction for snap_scaffold_14-snap.1388-T1 Valid prediction for Augustus_model.g23397.t1 Valid prediction for snap_scaffold_14-snap.1366-T1 Valid prediction for snap_scaffold_14-snap.1396-T1 Valid prediction for pasa_asmbl_12064.p1 Valid prediction for GeneMark_model.59617_t Valid prediction for snap_scaffold_14-snap.1401-T1 Valid prediction for snap_scaffold_14-snap.1391-T1 Couldn't classify 147876, 147941 Sorry, prediction pasa_asmbl_12077.p1 fails validation. (GGA) AA 147876-147941 GT TAG (AAA) AG 148184-148302 GT AAG (AAT) AG 148428-148562 GT AGG (TTC) AG 149230-149305 GT AGG (GTC) AG 149504-149536 GT AGG (TCT) AG 149748-149816 GT AGG (GAA) AG 150352-150450 GT TGG (GGA) AG 150729-150764 GT TGG (GCA) AG 150956-151054 GT AGG (ACG) AG 151607-151671 GT GTG (ATT) AG 151798-151860 GT GTG (GGC) AG 151952-152065 GT AGG (ACT) AG 152738-152845 GT AGG (GAA) AG 152974-153069 GT TGG (TGT) AG 153463-153598 GT AGG (GTG) AG 153715-153783 TC GAT -recovered pasa_asmbl_12077.p1, terminal, 148184, 148302 -recovered pasa_asmbl_12077.p1, terminal, 153715, 153783 -recovered pasa_asmbl_12077.p1, internal, 148184, 148302 -recovered pasa_asmbl_12077.p1, internal, 148428, 148562 -recovered pasa_asmbl_12077.p1, internal, 149230, 149305 -recovered pasa_asmbl_12077.p1, internal, 149504, 149536 -recovered pasa_asmbl_12077.p1, internal, 149748, 149816 -recovered pasa_asmbl_12077.p1, internal, 150352, 150450 -recovered pasa_asmbl_12077.p1, internal, 150729, 150764 -recovered pasa_asmbl_12077.p1, internal, 150956, 151054 -recovered pasa_asmbl_12077.p1, internal, 151607, 151671 -recovered pasa_asmbl_12077.p1, internal, 151798, 151860 -recovered pasa_asmbl_12077.p1, internal, 151952, 152065 -recovered pasa_asmbl_12077.p1, internal, 152738, 152845 -recovered pasa_asmbl_12077.p1, internal, 152974, 153069 -recovered pasa_asmbl_12077.p1, internal, 153463, 153598 Valid prediction for GeneMark_model.59623_t Valid prediction for snap_scaffold_14-snap.1383-T1 Valid prediction for Augustus_model.g23393.t1 Valid prediction for Augustus_model.g23400.t1 Valid prediction for HiQ_model.g23404.t1 Valid prediction for GeneMark_model.59600_t Valid prediction for snap_scaffold_14-snap.1370-T1 Valid prediction for snap_scaffold_14-snap.1406-T1 Valid prediction for pasa_asmbl_12073.p1 Valid prediction for CodingQuarry_transcript_15635-T1 Valid prediction for GeneMark_model.59611_t Valid prediction for snap_scaffold_14-snap.1375-T1 Valid prediction for Augustus_model.g23402.t1 Valid prediction for GlimmerHMM_glimmerT_34809-T1 Valid prediction for GeneMark_model.59609_t Valid prediction for GlimmerHMM_glimmerT_34804-T1 Valid prediction for snap_scaffold_14-snap.1371-T1 Valid prediction for GlimmerHMM_glimmerT_34799-T1 Valid prediction for CodingQuarry_transcript_15634-T1 Valid prediction for snap_scaffold_14-snap.1363-T1 Valid prediction for GeneMark_model.59639_t Valid prediction for GeneMark_model.59606_t Couldn't classify 253086, 253385 Sorry, prediction pasa_asmbl_12082.p1 fails validation. (ATG) AC 253086-253385 GA ATG Valid prediction for GlimmerHMM_glimmerT_34827-T1 Valid prediction for GeneMark_model.59626_t Valid prediction for CodingQuarry_transcript_15637-T1 Valid prediction for snap_scaffold_14-snap.1385-T1 Valid prediction for snap_scaffold_14-snap.1394-T1 Valid prediction for snap_scaffold_14-snap.1377-T1 Valid prediction for CodingQuarry_transcript_15636-T1 Couldn't classify 166283, 166448 Sorry, prediction pasa_asmbl_12079.p1 fails validation. (AAG) CA 166283-166448 GT AGG (GTC) AG 166814-166966 GT AGG (ACG) AG 169930-169979 GT AGG (GTC) AG 170189-170594 GT AGG (GGC) AG 171134-171255 GT AGG (ATT) AG 171420-171549 GT AGG (GTG) AG 173133-173226 GT AGG (CGA) AG 173512-173743 GT TGG (AAC) AG 176014-176136 GT AGG (ATC) AG 176325-176534 GT TGG (TTC) AG 177109-177322 GT GGG (GTG) AG 178706-178968 AA GAA -recovered pasa_asmbl_12079.p1, terminal, 178706, 178968 -recovered pasa_asmbl_12079.p1, internal, 166814, 166966 -recovered pasa_asmbl_12079.p1, internal, 169930, 169979 -recovered pasa_asmbl_12079.p1, internal, 170189, 170594 -recovered pasa_asmbl_12079.p1, internal, 171134, 171255 -recovered pasa_asmbl_12079.p1, internal, 171420, 171549 -recovered pasa_asmbl_12079.p1, internal, 173133, 173226 -recovered pasa_asmbl_12079.p1, internal, 173512, 173743 -recovered pasa_asmbl_12079.p1, internal, 176014, 176136 -recovered pasa_asmbl_12079.p1, internal, 176325, 176534 -recovered pasa_asmbl_12079.p1, internal, 177109, 177322 Valid prediction for GlimmerHMM_glimmerT_34807-T1 Couldn't classify 230732, 230829 Couldn't classify 233084, 233180 Sorry, prediction pasa_asmbl_12693.p2 fails validation. (CTG) GA 230732-230829 GT AAG (AGG) AG 232327-232521 GT AGG (GTG) AG 233084-233180 CT CGC -recovered pasa_asmbl_12693.p2, internal, 232327, 232521 Couldn't classify 105354, 105521 Sorry, prediction pasa_asmbl_12072.p1 fails validation. (GAA) CG 105354-105521 GT CGG (CCC) AG 105743-105941 GT GGG (TCA) AG 106103-106791 GT AGG (ATT) AG 106962-107147 GC GAG -recovered pasa_asmbl_12072.p1, terminal, 106962, 107147 -recovered pasa_asmbl_12072.p1, internal, 105743, 105941 -recovered pasa_asmbl_12072.p1, internal, 106103, 106791 -recovered pasa_asmbl_12072.p1, internal, 106962, 107147 Valid prediction for snap_scaffold_14-snap.1367-T1 Valid prediction for snap_scaffold_14-snap.1379-T1 Valid prediction for snap_scaffold_14-snap.1395-T1 Valid prediction for GlimmerHMM_glimmerT_34808-T1 Valid prediction for Augustus_model.g23406.t1 Valid prediction for GlimmerHMM_glimmerT_34798-T1 -loading the search evidence (protein and EST search results, strand: +) -scoring exons (strand: +) ** Processing features (-) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: -) -loading gene prediction evidence. (strand: -)Valid prediction for Augustus_model.g23407.t1 Valid prediction for GeneMark_model.59631_t Valid prediction for GeneMark_model.59634_t Valid prediction for snap_scaffold_14-snap.1360-T1 Valid prediction for GlimmerHMM_glimmerT_34813-T1 Valid prediction for GeneMark_model.59637_t Valid prediction for Augustus_model.g23410.t1 Valid prediction for GlimmerHMM_glimmerT_34819-T1 Couldn't classify 84391, 84609 Sorry, prediction pasa_asmbl_13137.p1 fails validation. (ATC) GA 84391-84609 GT AGG (GAG) AG 86374-86457 CC GAC -recovered pasa_asmbl_13137.p1, terminal, 86374, 86457 Valid prediction for Augustus_model.g23412.t1 Valid prediction for GlimmerHMM_glimmerT_34821-T1 Valid prediction for GlimmerHMM_glimmerT_34802-T1 Valid prediction for pasa_asmbl_13123.p1 Valid prediction for HiQ_model.g23399.t1 Valid prediction for snap_scaffold_14-snap.1398-T1 Valid prediction for GeneMark_model.59603_t Valid prediction for snap_scaffold_14-snap.1368-T1 Valid prediction for CodingQuarry_transcript_15631-T1 Valid prediction for CodingQuarry_transcript_15627-T1 Valid prediction for HiQ_model.g23401.t1 Valid prediction for snap_scaffold_14-snap.1376-T1 Valid prediction for GeneMark_model.59618_t Valid prediction for snap_scaffold_14-snap.1386-T1 Valid prediction for GlimmerHMM_glimmerT_34811-T1 Valid prediction for GeneMark_model.59616_t Valid prediction for snap_scaffold_14-snap.1387-T1 Valid prediction for GeneMark_model.59625_t Valid prediction for GlimmerHMM_glimmerT_34812-T1 Valid prediction for GlimmerHMM_glimmerT_34815-T1 Valid prediction for GeneMark_model.59605_t Valid prediction for snap_scaffold_14-snap.1392-T1 Valid prediction for snap_scaffold_14-snap.1358-T1 Valid prediction for GeneMark_model.59607_t Valid prediction for GeneMark_model.59622_t Valid prediction for snap_scaffold_14-snap.1365-T1 Valid prediction for GeneMark_model.59629_t Valid prediction for snap_scaffold_14-snap.1378-T1 Valid prediction for snap_scaffold_14-snap.1361-T1 Valid prediction for snap_scaffold_14-snap.1374-T1 Valid prediction for snap_scaffold_14-snap.1402-T1 Valid prediction for CodingQuarry_transcript_15632-T1 Couldn't classify 68558, 69064 Sorry, prediction pasa_asmbl_13141.p1 fails validation. (ATG) CC 68558-69064 AC AAA Valid prediction for pasa_asmbl_13129.p1 Valid prediction for GlimmerHMM_glimmerT_34820-T1 Valid prediction for GlimmerHMM_glimmerT_34806-T1 Valid prediction for GlimmerHMM_glimmerT_34817-T1 Valid prediction for GeneMark_model.59620_t Valid prediction for GlimmerHMM_glimmerT_34801-T1 Couldn't classify 30127, 30280 Sorry, prediction pasa_asmbl_13142.p1 fails validation. (CAT) AC 30127-30280 GT CGG (ACG) AG 32667-32881 GT TGG (TGC) AG 33264-33443 GT AGG (GTG) AG 33660-33746 GT AGG (ACG) AG 33864-33963 GT TGG (TGA) AG 34364-34468 GT AGG (GTT) AG 34778-34989 GT AGG (GCC) AG 36376-36521 GT TAG (TCT) AG 36820-36934 GT AGG (GAT) AG 37360-37608 GT CTG (GTG) AG 37928-38276 GT AGG (GCC) AG 38495-38668 GT AGG (ACC) AG 38901-39088 GT CGG (CCA) AG 39394-39534 GT AGG (GAA) AG 39730-39756 TA AGT -recovered pasa_asmbl_13142.p1, terminal, 39730, 39756 -recovered pasa_asmbl_13142.p1, internal, 32667, 32881 -recovered pasa_asmbl_13142.p1, internal, 33264, 33443 -recovered pasa_asmbl_13142.p1, internal, 33660, 33746 -recovered pasa_asmbl_13142.p1, internal, 33864, 33963 -recovered pasa_asmbl_13142.p1, internal, 34364, 34468 -recovered pasa_asmbl_13142.p1, internal, 34778, 34989 -recovered pasa_asmbl_13142.p1, internal, 36376, 36521 -recovered pasa_asmbl_13142.p1, internal, 36820, 36934 -recovered pasa_asmbl_13142.p1, internal, 37360, 37608 -recovered pasa_asmbl_13142.p1, internal, 37928, 38276 -recovered pasa_asmbl_13142.p1, internal, 38495, 38668 -recovered pasa_asmbl_13142.p1, internal, 38901, 39088 -recovered pasa_asmbl_13142.p1, internal, 39394, 39534 Valid prediction for snap_scaffold_14-snap.1384-T1 Valid prediction for snap_scaffold_14-snap.1400-T1 Valid prediction for GlimmerHMM_glimmerT_34828-T1 Valid prediction for GeneMark_model.59621_t Valid prediction for Augustus_model.g23405.t1 Valid prediction for GeneMark_model.59627_t Valid prediction for snap_scaffold_14-snap.1381-T1 Valid prediction for GeneMark_model.59601_t Valid prediction for Augustus_model.g23391.t1 Valid prediction for pasa_asmbl_13126.p1 Valid prediction for GeneMark_model.59624_t Valid prediction for snap_scaffold_14-snap.1372-T1 Valid prediction for GeneMark_model.59636_t Valid prediction for snap_scaffold_14-snap.1404-T1 Valid prediction for GeneMark_model.59640_t Valid prediction for pasa_asmbl_13132.p1 Valid prediction for Augustus_model.g23403.t1 Couldn't classify 113267, 113381 Sorry, prediction pasa_asmbl_13134.p1 fails validation. (TTA) CA 113267-113381 GT AGG (AAT) AG 113501-114910 GC AGG (GGA) AG 115012-115145 GT AGG (ATC) AG 116164-116282 GT CAG (CTG) AG 116483-116626 GT ACG (GTA) AG 117214-117359 GT GGG (CGC) AG 118503-118657 GT AAG (AAT) AG 119861-120002 GT CGG (GTA) AG 121597-121766 AT GAA -recovered pasa_asmbl_13134.p1, terminal, 121597, 121766 -recovered pasa_asmbl_13134.p1, internal, 113501, 114910 -recovered pasa_asmbl_13134.p1, internal, 115012, 115145 -recovered pasa_asmbl_13134.p1, internal, 116164, 116282 -recovered pasa_asmbl_13134.p1, internal, 116483, 116626 -recovered pasa_asmbl_13134.p1, internal, 117214, 117359 -recovered pasa_asmbl_13134.p1, internal, 118503, 118657 -recovered pasa_asmbl_13134.p1, internal, 119861, 120002 Valid prediction for GlimmerHMM_glimmerT_34825-T1 Valid prediction for GlimmerHMM_glimmerT_34823-T1 Valid prediction for GlimmerHMM_glimmerT_34826-T1 Couldn't classify 69437, 69534 Sorry, prediction pasa_asmbl_13139.p1 fails validation. (CCC) GC 69437-69534 GT AGG (GCT) AG 70554-70680 GC AGG (TTT) AG 71564-71692 GT AGG (GCA) AG 72936-73148 GT AGG (GAA) AG 73783-73902 GT AGG (GAG) AG 74833-74937 GT AGG (GAG) AG 75410-75508 GT AGG (ATG) AG 76517-76603 GT AGG (CTG) AG 76693-76835 GT CGG (TGA) AG 77847-78102 GT AGG (ACG) AG 78444-78633 GT AGG (CTC) AG 79552-79632 GT TGG (GTT) AG 80155-80402 GT GAG -recovered pasa_asmbl_13139.p1, initial, 76517, 76603 -recovered pasa_asmbl_13139.p1, terminal, 80155, 80402 -recovered pasa_asmbl_13139.p1, internal, 70554, 70680 -recovered pasa_asmbl_13139.p1, internal, 71564, 71692 -recovered pasa_asmbl_13139.p1, internal, 72936, 73148 -recovered pasa_asmbl_13139.p1, internal, 73783, 73902 -recovered pasa_asmbl_13139.p1, internal, 74833, 74937 -recovered pasa_asmbl_13139.p1, internal, 75410, 75508 -recovered pasa_asmbl_13139.p1, internal, 76517, 76603 -recovered pasa_asmbl_13139.p1, internal, 76693, 76835 -recovered pasa_asmbl_13139.p1, internal, 77847, 78102 -recovered pasa_asmbl_13139.p1, internal, 78444, 78633 -recovered pasa_asmbl_13139.p1, internal, 79552, 79632 -recovered pasa_asmbl_13139.p1, internal, 80155, 80402 Valid prediction for snap_scaffold_14-snap.1362-T1 -loading the search evidence (protein and EST search results, strand: -) -scoring exons (strand: -)Error with prediction: snap lend_intergenic: 16997, rend_intergenic: 7510 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 45131, rend_intergenic: 38694 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 56968, rend_intergenic: 54839 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 84091, rend_intergenic: 81791 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 88401, rend_intergenic: 84473 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 89853, rend_intergenic: 89571 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 93595, rend_intergenic: 90022 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 99558, rend_intergenic: 95512 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 131234, rend_intergenic: 124963 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 210165, rend_intergenic: 196933 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 230926, rend_intergenic: 229287 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 232858, rend_intergenic: 231916 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 246561, rend_intergenic: 241688 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 252366, rend_intergenic: 247525 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -building DP trellis -building trellis in range 1 - 278722 -exon list size: 762 building trellis 0.1 0.3 0.4 0.5 0.7 0.8 0.9 1.0 1.2 1.3 1.4 1.6 1.7 1.8 2.0 2.1 2.2 2.4 2.5 2.6 2.7 2.9 3.0 3.1 3.3 3.4 3.5 3.7 3.8 3.9 4.1 4.2 4.3 4.5 4.6 4.7 4.8 5.0 5.1 5.2 5.4 5.5 5.6 5.8 5.9 6.0 6.2 6.3 6.4 6.5 6.7 6.8 6.9 7.1 7.2 7.3 7.5 7.6 7.7 7.9 8.0 8.1 8.2 8.4 8.5 8.6 8.8 8.9 9.0 9.2 9.3 9.4 9.6 9.7 9.8 9.9 10.1 10.2 10.3 10.5 10.6 10.7 10.9 11.0 11.1 11.3 11.4 11.5 11.6 11.8 11.9 12.0 12.2 12.3 12.4 12.6 12.7 12.8 13.0 13.1 13.2 13.4 13.5 13.6 13.7 13.9 14.0 14.1 14.3 14.4 14.5 14.7 14.8 14.9 15.1 15.2 15.3 15.4 15.6 15.7 15.8 16.0 16.1 16.2 16.4 16.5 16.6 16.8 16.9 17.0 17.1 17.3 17.4 17.5 17.7 17.8 17.9 18.1 18.2 18.3 18.5 18.6 18.7 18.8 19.0 19.1 19.2 19.4 19.5 19.6 19.8 19.9 20.0 20.2 20.3 20.4 20.5 20.7 20.8 20.9 21.1 21.2 21.3 21.5 21.6 21.7 21.9 22.0 22.1 22.3 22.4 22.5 22.6 22.8 22.9 23.0 23.2 23.3 23.4 23.6 23.7 23.8 24.0 24.1 24.2 24.3 24.5 24.6 24.7 24.9 25.0 25.1 25.3 25.4 25.5 25.7 25.8 25.9 26.0 26.2 26.3 26.4 26.6 26.7 26.8 27.0 27.1 27.2 27.4 27.5 27.6 27.7 27.9 28.0 28.1 28.3 28.4 28.5 28.7 28.8 28.9 29.1 29.2 29.3 29.5 29.6 29.7 29.8 30.0 30.1 30.2 30.4 30.5 30.6 30.8 30.9 31.0 31.2 31.3 31.4 31.5 31.7 31.8 31.9 32.1 32.2 32.3 32.5 32.6 32.7 32.9 33.0 33.1 33.2 33.4 33.5 33.6 33.8 33.9 34.0 34.2 34.3 34.4 34.6 34.7 34.8 34.9 35.1 35.2 35.3 35.5 35.6 35.7 35.9 36.0 36.1 36.3 36.4 36.5 36.6 36.8 36.9 37.0 37.2 37.3 37.4 37.6 37.7 37.8 38.0 38.1 38.2 38.4 38.5 38.6 38.7 38.9 39.0 39.1 39.3 39.4 39.5 39.7 39.8 39.9 40.1 40.2 40.3 40.4 40.6 40.7 40.8 41.0 41.1 41.2 41.4 41.5 41.6 41.8 41.9 42.0 42.1 42.3 42.4 42.5 42.7 42.8 42.9 43.1 43.2 43.3 43.5 43.6 43.7 43.8 44.0 44.1 44.2 44.4 44.5 44.6 44.8 44.9 45.0 45.2 45.3 45.4 45.5 45.7 45.8 45.9 46.1 46.2 46.3 46.5 46.6 46.7 46.9 47.0 47.1 47.3 47.4 47.5 47.6 47.8 47.9 48.0 48.2 48.3 48.4 48.6 48.7 48.8 49.0 49.1 49.2 49.3 49.5 49.6 49.7 49.9 50.0 50.1 50.3 50.4 50.5 50.7 50.8 50.9 51.0 51.2 51.3 51.4 51.6 51.7 51.8 52.0 52.1 52.2 52.4 52.5 52.6 52.7 52.9 53.0 53.1 53.3 53.4 53.5 53.7 53.8 53.9 54.1 54.2 54.3 54.5 54.6 54.7 54.8 55.0 55.1 55.2 55.4 55.5 55.6 55.8 55.9 56.0 56.2 56.3 56.4 56.5 56.7 56.8 56.9 57.1 57.2 57.3 57.5 57.6 57.7 57.9 58.0 58.1 58.2 58.4 58.5 58.6 58.8 58.9 59.0 59.2 59.3 59.4 59.6 59.7 59.8 59.9 60.1 60.2 60.3 60.5 60.6 60.7 60.9 61.0 61.1 61.3 61.4 61.5 61.6 61.8 61.9 62.0 62.2 62.3 62.4 62.6 62.7 62.8 63.0 63.1 63.2 63.4 63.5 63.6 63.7 63.9 64.0 64.1 64.3 64.4 64.5 64.7 64.8 64.9 65.1 65.2 65.3 65.4 65.6 65.7 65.8 66.0 66.1 66.2 66.4 66.5 66.6 66.8 66.9 67.0 67.1 67.3 67.4 67.5 67.7 67.8 67.9 68.1 68.2 68.3 68.5 68.6 68.7 68.8 69.0 69.1 69.2 69.4 69.5 69.6 69.8 69.9 70.0 70.2 70.3 70.4 70.5 70.7 70.8 70.9 71.1 71.2 71.3 71.5 71.6 71.7 71.9 72.0 72.1 72.3 72.4 72.5 72.6 72.8 72.9 73.0 73.2 73.3 73.4 73.6 73.7 73.8 74.0 74.1 74.2 74.3 74.5 74.6 74.7 74.9 75.0 75.1 75.3 75.4 75.5 75.7 75.8 75.9 76.0 76.2 76.3 76.4 76.6 76.7 76.8 77.0 77.1 77.2 77.4 77.5 77.6 77.7 77.9 78.0 78.1 78.3 78.4 78.5 78.7 78.8 78.9 79.1 79.2 79.3 79.5 79.6 79.7 79.8 80.0 80.1 80.2 80.4 80.5 80.6 80.8 80.9 81.0 81.2 81.3 81.4 81.5 81.7 81.8 81.9 82.1 82.2 82.3 82.5 82.6 82.7 82.9 83.0 83.1 83.2 83.4 83.5 83.6 83.8 83.9 84.0 84.2 84.3 84.4 84.6 84.7 84.8 84.9 85.1 85.2 85.3 85.5 85.6 85.7 85.9 86.0 86.1 86.3 86.4 86.5 86.6 86.8 86.9 87.0 87.2 87.3 87.4 87.6 87.7 87.8 88.0 88.1 88.2 88.4 88.5 88.6 88.7 88.9 89.0 89.1 89.3 89.4 89.5 89.7 89.8 89.9 90.1 90.2 90.3 90.4 90.6 90.7 90.8 91.0 91.1 91.2 91.4 91.5 91.6 91.8 91.9 92.0 92.1 92.3 92.4 92.5 92.7 92.8 92.9 93.1 93.2 93.3 93.5 93.6 93.7 93.8 94.0 94.1 94.2 94.4 94.5 94.6 94.8 94.9 95.0 95.2 95.3 95.4 95.5 95.7 95.8 95.9 96.1 96.2 96.3 96.5 96.6 96.7 96.9 97.0 97.1 97.3 97.4 97.5 97.6 97.8 97.9 98.0 98.2 98.3 98.4 98.6 98.7 98.8 99.0 99.1 99.2 99.3 99.5 99.6 99.7 99.9 -found 24 predictions from path traversal Error with prediction: snap lend_intergenic: 16997, rend_intergenic: 7510 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 45131, rend_intergenic: 38694 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 56968, rend_intergenic: 54839 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 84091, rend_intergenic: 81791 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 88401, rend_intergenic: 84473 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 89853, rend_intergenic: 89571 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 93595, rend_intergenic: 90022 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 99558, rend_intergenic: 95512 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 131234, rend_intergenic: 124963 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 210165, rend_intergenic: 196933 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 230926, rend_intergenic: 229287 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 232858, rend_intergenic: 231916 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 246561, rend_intergenic: 241688 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 252366, rend_intergenic: 247525 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -reporting highest scoring path thru the trellis. -found 21 predictions persist after filtering for low support -building DP trellis -building trellis in range 267861 - 278722 -exon list size: 11 building trellis 7.7 15.4 23.1 30.8 38.5 46.2 53.8 61.5 69.2 76.9 84.6 92.3 -found 1 predictions from path traversal GOT 5prime partial gene. -reporting highest scoring path thru the trellis. -found 1 predictions persist after filtering for low support