-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_14/scaffold_14_4940286-5132135

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for GeneMark_model.59189_t
Valid prediction for snap_scaffold_14-snap.1004-T1
Valid prediction for GeneMark_model.59191_t
Couldn't classify 59921, 60042
Sorry, prediction GeneMark_model.59156_t fails validation.
(GTA)	 AG	59921-60042	GT	AAG
(GAG)	 AG	61300-61314	GT	GAG
(AGT)	 AG	61336-61383	GT	GAG
(AGA)	 AG	61432-61452	GT	GAG
(GAG)	 AG	61482-61509	GT	AAG
-recovered GeneMark_model.59156_t, terminal, 59921, 60042
-recovered GeneMark_model.59156_t, terminal, 61482, 61509
-recovered GeneMark_model.59156_t, internal, 59921, 60042
-recovered GeneMark_model.59156_t, internal, 61300, 61314
-recovered GeneMark_model.59156_t, internal, 61336, 61383
-recovered GeneMark_model.59156_t, internal, 61432, 61452
-recovered GeneMark_model.59156_t, internal, 61482, 61509
Valid prediction for snap_scaffold_14-snap.992-T1
Valid prediction for Augustus_model.g23223.t1
Valid prediction for GeneMark_model.59164_t
Valid prediction for snap_scaffold_14-snap.989-T1
Valid prediction for GlimmerHMM_glimmerT_34544-T1
Valid prediction for GeneMark_model.59175_t
Valid prediction for GeneMark_model.59169_t
Valid prediction for GlimmerHMM_glimmerT_34549-T1
Valid prediction for GeneMark_model.59138_t
Valid prediction for snap_scaffold_14-snap.1011-T1
Valid prediction for GeneMark_model.59197_t
Valid prediction for Augustus_model.g23217.t1
Valid prediction for snap_scaffold_14-snap.1008-T1
Valid prediction for GeneMark_model.59195_t
Valid prediction for GeneMark_model.59171_t
Valid prediction for GeneMark_model.59190_t
Valid prediction for GeneMark_model.59196_t
Valid prediction for GlimmerHMM_glimmerT_34551-T1
Valid prediction for GeneMark_model.59182_t
Valid prediction for snap_scaffold_14-snap.1002-T1
Valid prediction for Augustus_model.g23220.t1
Valid prediction for GeneMark_model.59193_t
Valid prediction for Augustus_model.g23229.t1
Valid prediction for GlimmerHMM_glimmerT_34540-T1
Valid prediction for GeneMark_model.59180_t
Valid prediction for GlimmerHMM_glimmerT_34556-T1
Valid prediction for GeneMark_model.59146_t
Valid prediction for GeneMark_model.59154_t
Valid prediction for GeneMark_model.59159_t
Valid prediction for GlimmerHMM_glimmerT_34545-T1
Valid prediction for snap_scaffold_14-snap.975-T1
Valid prediction for GlimmerHMM_glimmerT_34541-T1
Valid prediction for Augustus_model.g23228.t1
Valid prediction for GlimmerHMM_glimmerT_34536-T1
Valid prediction for GeneMark_model.59166_t
Valid prediction for Augustus_model.g23221.t1
Valid prediction for snap_scaffold_14-snap.981-T1
Valid prediction for GeneMark_model.59177_t
Valid prediction for snap_scaffold_14-snap.996-T1
Valid prediction for GlimmerHMM_glimmerT_34558-T1
Valid prediction for snap_scaffold_14-snap.1019-T1
Valid prediction for GlimmerHMM_glimmerT_34557-T1
Valid prediction for snap_scaffold_14-snap.985-T1
Valid prediction for snap_scaffold_14-snap.1015-T1
Valid prediction for snap_scaffold_14-snap.986-T1
Valid prediction for GeneMark_model.59163_t
Valid prediction for GeneMark_model.59185_t
Valid prediction for GeneMark_model.59183_t
Valid prediction for snap_scaffold_14-snap.1017-T1
Valid prediction for GeneMark_model.59150_t
Valid prediction for GeneMark_model.59140_t
Valid prediction for Augustus_model.g23224.t1
Valid prediction for GeneMark_model.59152_t
Valid prediction for snap_scaffold_14-snap.1009-T1
Valid prediction for GeneMark_model.59187_t
Valid prediction for GeneMark_model.59174_t
Valid prediction for GlimmerHMM_glimmerT_34555-T1
Valid prediction for GeneMark_model.59141_t
Valid prediction for snap_scaffold_14-snap.1016-T1
Valid prediction for Augustus_model.g23226.t1
Valid prediction for GlimmerHMM_glimmerT_34553-T1
Couldn't classify 178759, 179418
Couldn't classify 179719, 179769
Sorry, prediction CodingQuarry_transcript_15592-T1 fails validation.
(ATG)	 TC	178759-179418	GA	ACG
(AGA)	 AT	179719-179769	CA	AGC
Valid prediction for GlimmerHMM_glimmerT_34546-T1
Valid prediction for snap_scaffold_14-snap.1001-T1
Valid prediction for GlimmerHMM_glimmerT_34550-T1
Valid prediction for GeneMark_model.59161_t
Valid prediction for snap_scaffold_14-snap.998-T1
Valid prediction for GlimmerHMM_glimmerT_34535-T1
Valid prediction for GlimmerHMM_glimmerT_34554-T1
Valid prediction for Augustus_model.g23218.t1
Valid prediction for Augustus_model.g23230.t1
Valid prediction for snap_scaffold_14-snap.978-T1
Valid prediction for GeneMark_model.59199_t
Valid prediction for snap_scaffold_14-snap.1013-T1
Valid prediction for Augustus_model.g23227.t1
Valid prediction for snap_scaffold_14-snap.995-T1
Valid prediction for GeneMark_model.59143_t

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for GeneMark_model.59160_t
Valid prediction for GeneMark_model.59184_t
Couldn't classify 132204, 132301
Sorry, prediction GeneMark_model.59155_t fails validation.
(GAT)	 AG	132204-132301	GT	GGG
(CCA)	 AG	132370-132513	GT	GAG
(AAA)	 AG	132981-133101	AA	AGA
-recovered GeneMark_model.59155_t, terminal, 132981, 133101
-recovered GeneMark_model.59155_t, internal, 132204, 132301
-recovered GeneMark_model.59155_t, internal, 132370, 132513
Valid prediction for GlimmerHMM_glimmerT_34548-T1
Valid prediction for snap_scaffold_14-snap.994-T1
Valid prediction for snap_scaffold_14-snap.977-T1
Valid prediction for snap_scaffold_14-snap.1000-T1
Valid prediction for GeneMark_model.59168_t
Valid prediction for GeneMark_model.59147_t
Valid prediction for GeneMark_model.59186_t
Valid prediction for GlimmerHMM_glimmerT_34547-T1
Valid prediction for GlimmerHMM_glimmerT_34542-T1
Valid prediction for snap_scaffold_14-snap.976-T1
Valid prediction for snap_scaffold_14-snap.1006-T1
Valid prediction for GlimmerHMM_glimmerT_34539-T1
Valid prediction for GeneMark_model.59135_t
Valid prediction for GeneMark_model.59194_t
Valid prediction for Augustus_model.g23222.t1
Valid prediction for GeneMark_model.59165_t
Valid prediction for GeneMark_model.59167_t
Valid prediction for snap_scaffold_14-snap.990-T1
Valid prediction for snap_scaffold_14-snap.984-T1
Valid prediction for GeneMark_model.59162_t
Valid prediction for snap_scaffold_14-snap.1012-T1
Valid prediction for GeneMark_model.59173_t
Valid prediction for snap_scaffold_14-snap.1010-T1
Valid prediction for GeneMark_model.59153_t
Valid prediction for Augustus_model.g23225.t1
Valid prediction for GeneMark_model.59158_t
Valid prediction for GeneMark_model.59179_t
Valid prediction for GeneMark_model.59145_t
Valid prediction for snap_scaffold_14-snap.988-T1
Valid prediction for GeneMark_model.59151_t
Valid prediction for GeneMark_model.59188_t
Valid prediction for snap_scaffold_14-snap.980-T1
Valid prediction for snap_scaffold_14-snap.1018-T1
Valid prediction for GeneMark_model.59192_t
Valid prediction for snap_scaffold_14-snap.982-T1
Valid prediction for snap_scaffold_14-snap.987-T1
Valid prediction for GeneMark_model.59139_t
Valid prediction for snap_scaffold_14-snap.997-T1
Valid prediction for GlimmerHMM_glimmerT_34552-T1
Valid prediction for GeneMark_model.59181_t
Valid prediction for Augustus_model.g23219.t1
Valid prediction for snap_scaffold_14-snap.1005-T1
Valid prediction for snap_scaffold_14-snap.1014-T1
Valid prediction for GeneMark_model.59170_t
Valid prediction for snap_scaffold_14-snap.974-T1
Valid prediction for snap_scaffold_14-snap.999-T1
Valid prediction for snap_scaffold_14-snap.983-T1
Valid prediction for GlimmerHMM_glimmerT_34543-T1
Valid prediction for GeneMark_model.59149_t
Valid prediction for GeneMark_model.59142_t
Valid prediction for snap_scaffold_14-snap.991-T1
Valid prediction for snap_scaffold_14-snap.1003-T1
Valid prediction for GeneMark_model.59137_t
Valid prediction for GeneMark_model.59157_t
Valid prediction for GeneMark_model.59176_t
Valid prediction for GeneMark_model.59172_t
Valid prediction for GeneMark_model.59148_t
Valid prediction for snap_scaffold_14-snap.979-T1
Valid prediction for snap_scaffold_14-snap.993-T1
Valid prediction for GeneMark_model.59144_t
Valid prediction for GlimmerHMM_glimmerT_34538-T1
Valid prediction for GeneMark_model.59178_t
Valid prediction for snap_scaffold_14-snap.1007-T1
Valid prediction for GlimmerHMM_glimmerT_34537-T1
Valid prediction for GeneMark_model.59136_t

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 30727, rend_intergenic: 26214  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 41768, rend_intergenic: 35649  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 53827, rend_intergenic: 45232  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 65461, rend_intergenic: 55511  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 71153, rend_intergenic: 65465  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 77977, rend_intergenic: 71561  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 86695, rend_intergenic: 78567  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 103327, rend_intergenic: 87269  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 106852, rend_intergenic: 104262  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 108062, rend_intergenic: 107411  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 113471, rend_intergenic: 110156  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 119454, rend_intergenic: 113578  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 123977, rend_intergenic: 120144  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 135886, rend_intergenic: 126407  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 138151, rend_intergenic: 136108  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 147726, rend_intergenic: 141687  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 150943, rend_intergenic: 148590  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 154729, rend_intergenic: 151732  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 173815, rend_intergenic: 169725  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 191850
-exon list size: 800


building trellis

0.1    
0.2    
0.4    
0.5    
0.6    
0.7    
0.9    
1.0    
1.1    
1.2    
1.4    
1.5    
1.6    
1.7    
1.9    
2.0    
2.1    
2.2    
2.4    
2.5    
2.6    
2.7    
2.9    
3.0    
3.1    
3.2    
3.4    
3.5    
3.6    
3.7    
3.9    
4.0    
4.1    
4.2    
4.4    
4.5    
4.6    
4.7    
4.9    
5.0    
5.1    
5.2    
5.4    
5.5    
5.6    
5.7    
5.9    
6.0    
6.1    
6.2    
6.4    
6.5    
6.6    
6.7    
6.9    
7.0    
7.1    
7.2    
7.4    
7.5    
7.6    
7.7    
7.9    
8.0    
8.1    
8.2    
8.4    
8.5    
8.6    
8.7    
8.9    
9.0    
9.1    
9.2    
9.4    
9.5    
9.6    
9.7    
9.9    
10.0    
10.1    
10.2    
10.3    
10.5    
10.6    
10.7    
10.8    
11.0    
11.1    
11.2    
11.3    
11.5    
11.6    
11.7    
11.8    
12.0    
12.1    
12.2    
12.3    
12.5    
12.6    
12.7    
12.8    
13.0    
13.1    
13.2    
13.3    
13.5    
13.6    
13.7    
13.8    
14.0    
14.1    
14.2    
14.3    
14.5    
14.6    
14.7    
14.8    
15.0    
15.1    
15.2    
15.3    
15.5    
15.6    
15.7    
15.8    
16.0    
16.1    
16.2    
16.3    
16.5    
16.6    
16.7    
16.8    
17.0    
17.1    
17.2    
17.3    
17.5    
17.6    
17.7    
17.8    
18.0    
18.1    
18.2    
18.3    
18.5    
18.6    
18.7    
18.8    
19.0    
19.1    
19.2    
19.3    
19.5    
19.6    
19.7    
19.8    
20.0    
20.1    
20.2    
20.3    
20.4    
20.6    
20.7    
20.8    
20.9    
21.1    
21.2    
21.3    
21.4    
21.6    
21.7    
21.8    
21.9    
22.1    
22.2    
22.3    
22.4    
22.6    
22.7    
22.8    
22.9    
23.1    
23.2    
23.3    
23.4    
23.6    
23.7    
23.8    
23.9    
24.1    
24.2    
24.3    
24.4    
24.6    
24.7    
24.8    
24.9    
25.1    
25.2    
25.3    
25.4    
25.6    
25.7    
25.8    
25.9    
26.1    
26.2    
26.3    
26.4    
26.6    
26.7    
26.8    
26.9    
27.1    
27.2    
27.3    
27.4    
27.6    
27.7    
27.8    
27.9    
28.1    
28.2    
28.3    
28.4    
28.6    
28.7    
28.8    
28.9    
29.1    
29.2    
29.3    
29.4    
29.6    
29.7    
29.8    
29.9    
30.0    
30.2    
30.3    
30.4    
30.5    
30.7    
30.8    
30.9    
31.0    
31.2    
31.3    
31.4    
31.5    
31.7    
31.8    
31.9    
32.0    
32.2    
32.3    
32.4    
32.5    
32.7    
32.8    
32.9    
33.0    
33.2    
33.3    
33.4    
33.5    
33.7    
33.8    
33.9    
34.0    
34.2    
34.3    
34.4    
34.5    
34.7    
34.8    
34.9    
35.0    
35.2    
35.3    
35.4    
35.5    
35.7    
35.8    
35.9    
36.0    
36.2    
36.3    
36.4    
36.5    
36.7    
36.8    
36.9    
37.0    
37.2    
37.3    
37.4    
37.5    
37.7    
37.8    
37.9    
38.0    
38.2    
38.3    
38.4    
38.5    
38.7    
38.8    
38.9    
39.0    
39.2    
39.3    
39.4    
39.5    
39.7    
39.8    
39.9    
40.0    
40.1    
40.3    
40.4    
40.5    
40.6    
40.8    
40.9    
41.0    
41.1    
41.3    
41.4    
41.5    
41.6    
41.8    
41.9    
42.0    
42.1    
42.3    
42.4    
42.5    
42.6    
42.8    
42.9    
43.0    
43.1    
43.3    
43.4    
43.5    
43.6    
43.8    
43.9    
44.0    
44.1    
44.3    
44.4    
44.5    
44.6    
44.8    
44.9    
45.0    
45.1    
45.3    
45.4    
45.5    
45.6    
45.8    
45.9    
46.0    
46.1    
46.3    
46.4    
46.5    
46.6    
46.8    
46.9    
47.0    
47.1    
47.3    
47.4    
47.5    
47.6    
47.8    
47.9    
48.0    
48.1    
48.3    
48.4    
48.5    
48.6    
48.8    
48.9    
49.0    
49.1    
49.3    
49.4    
49.5    
49.6    
49.8    
49.9    
50.0    
50.1    
50.2    
50.4    
50.5    
50.6    
50.7    
50.9    
51.0    
51.1    
51.2    
51.4    
51.5    
51.6    
51.7    
51.9    
52.0    
52.1    
52.2    
52.4    
52.5    
52.6    
52.7    
52.9    
53.0    
53.1    
53.2    
53.4    
53.5    
53.6    
53.7    
53.9    
54.0    
54.1    
54.2    
54.4    
54.5    
54.6    
54.7    
54.9    
55.0    
55.1    
55.2    
55.4    
55.5    
55.6    
55.7    
55.9    
56.0    
56.1    
56.2    
56.4    
56.5    
56.6    
56.7    
56.9    
57.0    
57.1    
57.2    
57.4    
57.5    
57.6    
57.7    
57.9    
58.0    
58.1    
58.2    
58.4    
58.5    
58.6    
58.7    
58.9    
59.0    
59.1    
59.2    
59.4    
59.5    
59.6    
59.7    
59.9    
60.0    
60.1    
60.2    
60.3    
60.5    
60.6    
60.7    
60.8    
61.0    
61.1    
61.2    
61.3    
61.5    
61.6    
61.7    
61.8    
62.0    
62.1    
62.2    
62.3    
62.5    
62.6    
62.7    
62.8    
63.0    
63.1    
63.2    
63.3    
63.5    
63.6    
63.7    
63.8    
64.0    
64.1    
64.2    
64.3    
64.5    
64.6    
64.7    
64.8    
65.0    
65.1    
65.2    
65.3    
65.5    
65.6    
65.7    
65.8    
66.0    
66.1    
66.2    
66.3    
66.5    
66.6    
66.7    
66.8    
67.0    
67.1    
67.2    
67.3    
67.5    
67.6    
67.7    
67.8    
68.0    
68.1    
68.2    
68.3    
68.5    
68.6    
68.7    
68.8    
69.0    
69.1    
69.2    
69.3    
69.5    
69.6    
69.7    
69.8    
70.0    
70.1    
70.2    
70.3    
70.4    
70.6    
70.7    
70.8    
70.9    
71.1    
71.2    
71.3    
71.4    
71.6    
71.7    
71.8    
71.9    
72.1    
72.2    
72.3    
72.4    
72.6    
72.7    
72.8    
72.9    
73.1    
73.2    
73.3    
73.4    
73.6    
73.7    
73.8    
73.9    
74.1    
74.2    
74.3    
74.4    
74.6    
74.7    
74.8    
74.9    
75.1    
75.2    
75.3    
75.4    
75.6    
75.7    
75.8    
75.9    
76.1    
76.2    
76.3    
76.4    
76.6    
76.7    
76.8    
76.9    
77.1    
77.2    
77.3    
77.4    
77.6    
77.7    
77.8    
77.9    
78.1    
78.2    
78.3    
78.4    
78.6    
78.7    
78.8    
78.9    
79.1    
79.2    
79.3    
79.4    
79.6    
79.7    
79.8    
79.9    
80.0    
80.2    
80.3    
80.4    
80.5    
80.7    
80.8    
80.9    
81.0    
81.2    
81.3    
81.4    
81.5    
81.7    
81.8    
81.9    
82.0    
82.2    
82.3    
82.4    
82.5    
82.7    
82.8    
82.9    
83.0    
83.2    
83.3    
83.4    
83.5    
83.7    
83.8    
83.9    
84.0    
84.2    
84.3    
84.4    
84.5    
84.7    
84.8    
84.9    
85.0    
85.2    
85.3    
85.4    
85.5    
85.7    
85.8    
85.9    
86.0    
86.2    
86.3    
86.4    
86.5    
86.7    
86.8    
86.9    
87.0    
87.2    
87.3    
87.4    
87.5    
87.7    
87.8    
87.9    
88.0    
88.2    
88.3    
88.4    
88.5    
88.7    
88.8    
88.9    
89.0    
89.2    
89.3    
89.4    
89.5    
89.7    
89.8    
89.9    
90.0    
90.1    
90.3    
90.4    
90.5    
90.6    
90.8    
90.9    
91.0    
91.1    
91.3    
91.4    
91.5    
91.6    
91.8    
91.9    
92.0    
92.1    
92.3    
92.4    
92.5    
92.6    
92.8    
92.9    
93.0    
93.1    
93.3    
93.4    
93.5    
93.6    
93.8    
93.9    
94.0    
94.1    
94.3    
94.4    
94.5    
94.6    
94.8    
94.9    
95.0    
95.1    
95.3    
95.4    
95.5    
95.6    
95.8    
95.9    
96.0    
96.1    
96.3    
96.4    
96.5    
96.6    
96.8    
96.9    
97.0    
97.1    
97.3    
97.4    
97.5    
97.6    
97.8    
97.9    
98.0    
98.1    
98.3    
98.4    
98.5    
98.6    
98.8    
98.9    
99.0    
99.1    
99.3    
99.4    
99.5    
99.6    
99.8    
99.9    
-found 36 predictions from path traversal
Error with prediction: snap lend_intergenic: 30727, rend_intergenic: 26214  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 41768, rend_intergenic: 35649  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 53827, rend_intergenic: 45232  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 65461, rend_intergenic: 55511  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 71153, rend_intergenic: 65465  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 77977, rend_intergenic: 71561  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 86695, rend_intergenic: 78567  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 103327, rend_intergenic: 87269  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 106852, rend_intergenic: 104262  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 108062, rend_intergenic: 107411  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 113471, rend_intergenic: 110156  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 119454, rend_intergenic: 113578  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 123977, rend_intergenic: 120144  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 135886, rend_intergenic: 126407  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 138151, rend_intergenic: 136108  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 147726, rend_intergenic: 141687  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 150943, rend_intergenic: 148590  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 154729, rend_intergenic: 151732  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 173815, rend_intergenic: 169725  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 13 predictions persist after filtering for low support

-building DP trellis

-building trellis in range 179770 - 191850
-exon list size: 9


building trellis

9.1    
18.2    
27.3    
36.4    
45.5    
54.5    
63.6    
72.7    
81.8    
90.9    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support