-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_14/scaffold_14_3623483-3843476

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for GeneMark_model.58749_t
Valid prediction for GeneMark_model.58770_t
Valid prediction for snap_scaffold_14-snap.655-T1
Valid prediction for GlimmerHMM_glimmerT_34326-T1
Valid prediction for GlimmerHMM_glimmerT_34340-T1
Valid prediction for GlimmerHMM_glimmerT_34322-T1
Valid prediction for GeneMark_model.58744_t
Valid prediction for snap_scaffold_14-snap.649-T1
Valid prediction for GeneMark_model.58728_t
Valid prediction for snap_scaffold_14-snap.672-T1
Valid prediction for GlimmerHMM_glimmerT_34320-T1
Valid prediction for Augustus_model.g23085.t1
Valid prediction for GeneMark_model.58705_t
Valid prediction for snap_scaffold_14-snap.642-T1
Valid prediction for GeneMark_model.58716_t
Valid prediction for HiQ_model.g23096.t1
Valid prediction for GlimmerHMM_glimmerT_34337-T1
Valid prediction for GeneMark_model.58733_t
Valid prediction for snap_scaffold_14-snap.677-T1
Valid prediction for Augustus_model.g23091.t1
Valid prediction for GeneMark_model.58723_t
Valid prediction for GeneMark_model.58756_t
Valid prediction for GeneMark_model.58721_t
Valid prediction for GlimmerHMM_glimmerT_34321-T1
Valid prediction for Augustus_model.g23079.t1
Valid prediction for GlimmerHMM_glimmerT_34336-T1
Valid prediction for GeneMark_model.58762_t
Valid prediction for snap_scaffold_14-snap.683-T1
Valid prediction for GeneMark_model.58763_t
Valid prediction for GeneMark_model.58750_t
Valid prediction for GeneMark_model.58748_t
Valid prediction for HiQ_model.g23087.t1
Valid prediction for snap_scaffold_14-snap.657-T1
Valid prediction for snap_scaffold_14-snap.641-T1
Valid prediction for GeneMark_model.58702_t
Valid prediction for GlimmerHMM_glimmerT_34339-T1
Valid prediction for GeneMark_model.58731_t
Valid prediction for snap_scaffold_14-snap.646-T1
Valid prediction for GeneMark_model.58715_t
Valid prediction for CodingQuarry_transcript_15580-T1
Valid prediction for GeneMark_model.58754_t
Valid prediction for GeneMark_model.58745_t
Valid prediction for GeneMark_model.58747_t
Valid prediction for GeneMark_model.58760_t
Valid prediction for GeneMark_model.58769_t
Valid prediction for GlimmerHMM_glimmerT_34316-T1
Valid prediction for snap_scaffold_14-snap.644-T1
Valid prediction for snap_scaffold_14-snap.680-T1
Valid prediction for GeneMark_model.58735_t
Valid prediction for GlimmerHMM_glimmerT_34312-T1
Valid prediction for GeneMark_model.58765_t
Valid prediction for GlimmerHMM_glimmerT_34318-T1
Valid prediction for GeneMark_model.58717_t
Valid prediction for GlimmerHMM_glimmerT_34314-T1
Valid prediction for GlimmerHMM_glimmerT_34330-T1
Valid prediction for GeneMark_model.58711_t
Couldn't classify 98046, 98163
Sorry, prediction pasa_asmbl_11936.p1 fails validation.
(GTG)	 AG	98046-98163	GT	AGG
(CGG)	 AG	98940-99067	GT	AGG
(GCC)	 AG	99682-99878	GT	AGG
(GAA)	 AG	100141-100273	GT	AGG
(GCG)	 AG	100403-100619	GT	GGG
(AGG)	 AG	100965-101101	GT	AGG
(GTG)	 AG	101720-101823	GT	AGG
(GAA)	 AG	102331-102523	GT	AGG
(GAC)	 AG	102799-103002	GT	AGG
(TTC)	 AG	103505-103630	GT	AGG
(AGT)	 AG	103831-104001	GT	AGG
(GTG)	 AG	104281-104481	GT	CGG
(GAG)	 AG	105336-105482	GT	CGG
(GGT)	 AG	105663-105815	GA	AGG
-recovered pasa_asmbl_11936.p1, terminal, 105663, 105815
-recovered pasa_asmbl_11936.p1, internal, 98046, 98163
-recovered pasa_asmbl_11936.p1, internal, 98940, 99067
-recovered pasa_asmbl_11936.p1, internal, 99682, 99878
-recovered pasa_asmbl_11936.p1, internal, 100141, 100273
-recovered pasa_asmbl_11936.p1, internal, 100403, 100619
-recovered pasa_asmbl_11936.p1, internal, 100965, 101101
-recovered pasa_asmbl_11936.p1, internal, 101720, 101823
-recovered pasa_asmbl_11936.p1, internal, 102331, 102523
-recovered pasa_asmbl_11936.p1, internal, 102799, 103002
-recovered pasa_asmbl_11936.p1, internal, 103505, 103630
-recovered pasa_asmbl_11936.p1, internal, 103831, 104001
-recovered pasa_asmbl_11936.p1, internal, 104281, 104481
-recovered pasa_asmbl_11936.p1, internal, 105336, 105482
Valid prediction for snap_scaffold_14-snap.664-T1
Valid prediction for GlimmerHMM_glimmerT_34341-T1
Valid prediction for snap_scaffold_14-snap.648-T1
Valid prediction for snap_scaffold_14-snap.676-T1
Valid prediction for pasa_asmbl_11934.p1
Valid prediction for Augustus_model.g23097.t1
Valid prediction for GlimmerHMM_glimmerT_34305-T1
Couldn't classify 176172, 176345
Sorry, prediction pasa_asmbl_11941.p1 fails validation.
(GAG)	 GA	176172-176345	GT	AGG
(AGG)	 AG	176579-176698	GT	AGG
(GGG)	 AG	176884-177003	GT	CAG
(ACG)	 AG	177119-177170	GT	AGG
(ACA)	 AG	177346-177473	GT	CGG
(CCC)	 AG	177752-177829	GT	TGG
(TAT)	 AG	178110-178258	GT	TGG
(CCT)	 AG	178708-178753	GT	TGG
(AAA)	 AG	179246-179359	CT	GAC
-recovered pasa_asmbl_11941.p1, terminal, 179246, 179359
-recovered pasa_asmbl_11941.p1, internal, 176579, 176698
-recovered pasa_asmbl_11941.p1, internal, 176884, 177003
-recovered pasa_asmbl_11941.p1, internal, 177119, 177170
-recovered pasa_asmbl_11941.p1, internal, 177346, 177473
-recovered pasa_asmbl_11941.p1, internal, 177752, 177829
-recovered pasa_asmbl_11941.p1, internal, 178110, 178258
-recovered pasa_asmbl_11941.p1, internal, 178708, 178753
Valid prediction for GeneMark_model.58737_t
Valid prediction for GeneMark_model.58758_t
Valid prediction for GeneMark_model.58707_t
Valid prediction for GeneMark_model.58726_t
Valid prediction for GeneMark_model.58704_t
Valid prediction for Augustus_model.g23088.t1
Valid prediction for GeneMark_model.58740_t
Valid prediction for GeneMark_model.58730_t
Valid prediction for snap_scaffold_14-snap.638-T1
Sorry, intron length (7) is less than minimum required (10)
Valid prediction for GeneMark_model.58752_t
Valid prediction for GeneMark_model.58767_t
Valid prediction for GeneMark_model.58712_t
Valid prediction for GlimmerHMM_glimmerT_34323-T1
Valid prediction for Augustus_model.g23100.t1
Valid prediction for snap_scaffold_14-snap.679-T1
Valid prediction for snap_scaffold_14-snap.640-T1
Valid prediction for snap_scaffold_14-snap.658-T1
Valid prediction for CodingQuarry_transcript_15581-T1
Valid prediction for snap_scaffold_14-snap.668-T1
Valid prediction for snap_scaffold_14-snap.650-T1
Valid prediction for GeneMark_model.58742_t
Couldn't classify 83695, 83844
Couldn't classify 85287, 85499
Sorry, prediction pasa_asmbl_11935.p1 fails validation.
(CTG)	 CT	83695-83844	GT	CTG
(GAG)	 AG	85287-85499	GA	CCG
Valid prediction for snap_scaffold_14-snap.681-T1
Valid prediction for snap_scaffold_14-snap.654-T1
Valid prediction for GlimmerHMM_glimmerT_34311-T1
Valid prediction for snap_scaffold_14-snap.634-T1
Valid prediction for Augustus_model.g23090.t1
Valid prediction for GeneMark_model.58719_t

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for GeneMark_model.58714_t
Valid prediction for snap_scaffold_14-snap.653-T1
Valid prediction for GeneMark_model.58751_t
Valid prediction for GeneMark_model.58738_t
Valid prediction for snap_scaffold_14-snap.651-T1
Valid prediction for GeneMark_model.58743_t
Valid prediction for snap_scaffold_14-snap.673-T1
Valid prediction for Augustus_model.g23101.t1
Valid prediction for GlimmerHMM_glimmerT_34334-T1
Valid prediction for GeneMark_model.58710_t
Valid prediction for GlimmerHMM_glimmerT_34332-T1
Valid prediction for GeneMark_model.58706_t
Valid prediction for GeneMark_model.58753_t
Valid prediction for GeneMark_model.58725_t
Valid prediction for snap_scaffold_14-snap.663-T1
Sorry, intron length (4) is less than minimum required (10)
Valid prediction for GeneMark_model.58755_t
Valid prediction for GlimmerHMM_glimmerT_34310-T1
Valid prediction for GeneMark_model.58734_t
Valid prediction for snap_scaffold_14-snap.647-T1
Valid prediction for GlimmerHMM_glimmerT_34327-T1
Valid prediction for GlimmerHMM_glimmerT_34307-T1
Valid prediction for snap_scaffold_14-snap.666-T1
Valid prediction for GlimmerHMM_glimmerT_34315-T1
Valid prediction for GeneMark_model.58713_t
Valid prediction for snap_scaffold_14-snap.636-T1
Valid prediction for snap_scaffold_14-snap.682-T1
Valid prediction for snap_scaffold_14-snap.652-T1
Valid prediction for GlimmerHMM_glimmerT_34306-T1
Valid prediction for Augustus_model.g23083.t1
Valid prediction for GeneMark_model.58722_t
Valid prediction for GeneMark_model.58771_t
Valid prediction for GlimmerHMM_glimmerT_34328-T1
Valid prediction for GeneMark_model.58768_t
Valid prediction for GlimmerHMM_glimmerT_34319-T1
Valid prediction for GlimmerHMM_glimmerT_34304-T1
Valid prediction for GlimmerHMM_glimmerT_34342-T1
Valid prediction for GlimmerHMM_glimmerT_34325-T1
Valid prediction for GeneMark_model.58701_t
Valid prediction for GeneMark_model.58766_t
Valid prediction for snap_scaffold_14-snap.674-T1
Valid prediction for snap_scaffold_14-snap.670-T1
Valid prediction for GlimmerHMM_glimmerT_34317-T1
Valid prediction for GlimmerHMM_glimmerT_34331-T1
Valid prediction for Augustus_model.g23089.t1
Valid prediction for Augustus_model.g23099.t1
Valid prediction for GlimmerHMM_glimmerT_34309-T1
Valid prediction for GeneMark_model.58736_t
Valid prediction for Augustus_model.g23080.t1
Valid prediction for Augustus_model.g23086.t1
Valid prediction for snap_scaffold_14-snap.662-T1
Valid prediction for GeneMark_model.58709_t
Valid prediction for GeneMark_model.58724_t
Valid prediction for GlimmerHMM_glimmerT_34313-T1
Valid prediction for GlimmerHMM_glimmerT_34329-T1
Valid prediction for GeneMark_model.58764_t
Valid prediction for snap_scaffold_14-snap.637-T1
Valid prediction for GeneMark_model.58703_t
Valid prediction for GeneMark_model.58741_t
Valid prediction for GeneMark_model.58761_t
Valid prediction for GlimmerHMM_glimmerT_34324-T1
Valid prediction for GeneMark_model.58759_t
Valid prediction for snap_scaffold_14-snap.659-T1
Valid prediction for GlimmerHMM_glimmerT_34335-T1
Valid prediction for GeneMark_model.58746_t
Valid prediction for GeneMark_model.58727_t
Valid prediction for GlimmerHMM_glimmerT_34308-T1
Valid prediction for snap_scaffold_14-snap.671-T1
Valid prediction for GeneMark_model.58729_t
Valid prediction for snap_scaffold_14-snap.675-T1
Valid prediction for GlimmerHMM_glimmerT_34343-T1
Valid prediction for Augustus_model.g23094.t1
Valid prediction for GeneMark_model.58708_t
Valid prediction for snap_scaffold_14-snap.660-T1
Valid prediction for snap_scaffold_14-snap.633-T1
Valid prediction for snap_scaffold_14-snap.643-T1
Couldn't classify 106452, 106529
Sorry, prediction pasa_asmbl_13009.p1 fails validation.
(ACT)	 GG	106452-106529	GT	AGG
(CTG)	 AG	108442-108570	GT	AGG
(GCA)	 AG	108881-109004	GT	AGG
(GCG)	 AG	110900-110979	GT	TGG
(GAG)	 AG	111197-111295	GT	GTG
(ACC)	 AG	111624-111737	CA	AAC
-recovered pasa_asmbl_13009.p1, terminal, 111624, 111737
-recovered pasa_asmbl_13009.p1, internal, 108442, 108570
-recovered pasa_asmbl_13009.p1, internal, 108881, 109004
-recovered pasa_asmbl_13009.p1, internal, 110900, 110979
-recovered pasa_asmbl_13009.p1, internal, 111197, 111295
Valid prediction for snap_scaffold_14-snap.645-T1
Valid prediction for snap_scaffold_14-snap.678-T1
Valid prediction for snap_scaffold_14-snap.635-T1
Sorry, intron length (4) is less than minimum required (10)
Valid prediction for Augustus_model.g23098.t1
Valid prediction for Augustus_model.g23092.t1
Valid prediction for Augustus_model.g23082.t1
Valid prediction for GeneMark_model.58757_t
Valid prediction for Augustus_model.g23078.t1
Valid prediction for snap_scaffold_14-snap.684-T1
Valid prediction for snap_scaffold_14-snap.656-T1
Valid prediction for GlimmerHMM_glimmerT_34333-T1
Valid prediction for snap_scaffold_14-snap.639-T1
Valid prediction for GeneMark_model.58739_t
Valid prediction for snap_scaffold_14-snap.667-T1
Valid prediction for Augustus_model.g23081.t1
Valid prediction for Augustus_model.g23095.t1
Valid prediction for Augustus_model.g23093.t1
Valid prediction for snap_scaffold_14-snap.665-T1
Valid prediction for GeneMark_model.58732_t
Valid prediction for snap_scaffold_14-snap.661-T1
Valid prediction for GlimmerHMM_glimmerT_34338-T1
Valid prediction for GeneMark_model.58720_t
Valid prediction for snap_scaffold_14-snap.669-T1
Valid prediction for GeneMark_model.58718_t
Valid prediction for Augustus_model.g23084.t1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 9422, rend_intergenic: 5946  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 21807, rend_intergenic: 12265  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 27998, rend_intergenic: 23493  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 29501, rend_intergenic: 28348  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 45178, rend_intergenic: 44481  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 50633, rend_intergenic: 48217  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 63072, rend_intergenic: 54115  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 76851, rend_intergenic: 74400  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 81582, rend_intergenic: 76862  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 106120, rend_intergenic: 82286  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 123408, rend_intergenic: 107828  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 138445, rend_intergenic: 135147  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 161545, rend_intergenic: 157095  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 205689, rend_intergenic: 190987  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 209415, rend_intergenic: 205897  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 215599, rend_intergenic: 209429  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 219994
-exon list size: 1080


building trellis

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37.2    
37.3    
37.4    
37.5    
37.6    
37.7    
37.8    
37.9    
38.0    
38.1    
38.2    
38.3    
38.4    
38.4    
38.5    
38.6    
38.7    
38.8    
38.9    
39.0    
39.1    
39.2    
39.3    
39.4    
39.5    
39.6    
39.6    
39.7    
39.8    
39.9    
40.0    
40.1    
40.2    
40.3    
40.4    
40.5    
40.6    
40.7    
40.8    
40.9    
40.9    
41.0    
41.1    
41.2    
41.3    
41.4    
41.5    
41.6    
41.7    
41.8    
41.9    
42.0    
42.1    
42.1    
42.2    
42.3    
42.4    
42.5    
42.6    
42.7    
42.8    
42.9    
43.0    
43.1    
43.2    
43.3    
43.3    
43.4    
43.5    
43.6    
43.7    
43.8    
43.9    
44.0    
44.1    
44.2    
44.3    
44.4    
44.5    
44.5    
44.6    
44.7    
44.8    
44.9    
45.0    
45.1    
45.2    
45.3    
45.4    
45.5    
45.6    
45.7    
45.7    
45.8    
45.9    
46.0    
46.1    
46.2    
46.3    
46.4    
46.5    
46.6    
46.7    
46.8    
46.9    
47.0    
47.0    
47.1    
47.2    
47.3    
47.4    
47.5    
47.6    
47.7    
47.8    
47.9    
48.0    
48.1    
48.2    
48.2    
48.3    
48.4    
48.5    
48.6    
48.7    
48.8    
48.9    
49.0    
49.1    
49.2    
49.3    
49.4    
49.4    
49.5    
49.6    
49.7    
49.8    
49.9    
50.0    
50.1    
50.2    
50.3    
50.4    
50.5    
50.6    
50.6    
50.7    
50.8    
50.9    
51.0    
51.1    
51.2    
51.3    
51.4    
51.5    
51.6    
51.7    
51.8    
51.8    
51.9    
52.0    
52.1    
52.2    
52.3    
52.4    
52.5    
52.6    
52.7    
52.8    
52.9    
53.0    
53.0    
53.1    
53.2    
53.3    
53.4    
53.5    
53.6    
53.7    
53.8    
53.9    
54.0    
54.1    
54.2    
54.3    
54.3    
54.4    
54.5    
54.6    
54.7    
54.8    
54.9    
55.0    
55.1    
55.2    
55.3    
55.4    
55.5    
55.5    
55.6    
55.7    
55.8    
55.9    
56.0    
56.1    
56.2    
56.3    
56.4    
56.5    
56.6    
56.7    
56.7    
56.8    
56.9    
57.0    
57.1    
57.2    
57.3    
57.4    
57.5    
57.6    
57.7    
57.8    
57.9    
57.9    
58.0    
58.1    
58.2    
58.3    
58.4    
58.5    
58.6    
58.7    
58.8    
58.9    
59.0    
59.1    
59.1    
59.2    
59.3    
59.4    
59.5    
59.6    
59.7    
59.8    
59.9    
60.0    
60.1    
60.2    
60.3    
60.4    
60.4    
60.5    
60.6    
60.7    
60.8    
60.9    
61.0    
61.1    
61.2    
61.3    
61.4    
61.5    
61.6    
61.6    
61.7    
61.8    
61.9    
62.0    
62.1    
62.2    
62.3    
62.4    
62.5    
62.6    
62.7    
62.8    
62.8    
62.9    
63.0    
63.1    
63.2    
63.3    
63.4    
63.5    
63.6    
63.7    
63.8    
63.9    
64.0    
64.0    
64.1    
64.2    
64.3    
64.4    
64.5    
64.6    
64.7    
64.8    
64.9    
65.0    
65.1    
65.2    
65.2    
65.3    
65.4    
65.5    
65.6    
65.7    
65.8    
65.9    
66.0    
66.1    
66.2    
66.3    
66.4    
66.5    
66.5    
66.6    
66.7    
66.8    
66.9    
67.0    
67.1    
67.2    
67.3    
67.4    
67.5    
67.6    
67.7    
67.7    
67.8    
67.9    
68.0    
68.1    
68.2    
68.3    
68.4    
68.5    
68.6    
68.7    
68.8    
68.9    
68.9    
69.0    
69.1    
69.2    
69.3    
69.4    
69.5    
69.6    
69.7    
69.8    
69.9    
70.0    
70.1    
70.1    
70.2    
70.3    
70.4    
70.5    
70.6    
70.7    
70.8    
70.9    
71.0    
71.1    
71.2    
71.3    
71.3    
71.4    
71.5    
71.6    
71.7    
71.8    
71.9    
72.0    
72.1    
72.2    
72.3    
72.4    
72.5    
72.6    
72.6    
72.7    
72.8    
72.9    
73.0    
73.1    
73.2    
73.3    
73.4    
73.5    
73.6    
73.7    
73.8    
73.8    
73.9    
74.0    
74.1    
74.2    
74.3    
74.4    
74.5    
74.6    
74.7    
74.8    
74.9    
75.0    
75.0    
75.1    
75.2    
75.3    
75.4    
75.5    
75.6    
75.7    
75.8    
75.9    
76.0    
76.1    
76.2    
76.2    
76.3    
76.4    
76.5    
76.6    
76.7    
76.8    
76.9    
77.0    
77.1    
77.2    
77.3    
77.4    
77.4    
77.5    
77.6    
77.7    
77.8    
77.9    
78.0    
78.1    
78.2    
78.3    
78.4    
78.5    
78.6    
78.7    
78.7    
78.8    
78.9    
79.0    
79.1    
79.2    
79.3    
79.4    
79.5    
79.6    
79.7    
79.8    
79.9    
79.9    
80.0    
80.1    
80.2    
80.3    
80.4    
80.5    
80.6    
80.7    
80.8    
80.9    
81.0    
81.1    
81.1    
81.2    
81.3    
81.4    
81.5    
81.6    
81.7    
81.8    
81.9    
82.0    
82.1    
82.2    
82.3    
82.3    
82.4    
82.5    
82.6    
82.7    
82.8    
82.9    
83.0    
83.1    
83.2    
83.3    
83.4    
83.5    
83.5    
83.6    
83.7    
83.8    
83.9    
84.0    
84.1    
84.2    
84.3    
84.4    
84.5    
84.6    
84.7    
84.8    
84.8    
84.9    
85.0    
85.1    
85.2    
85.3    
85.4    
85.5    
85.6    
85.7    
85.8    
85.9    
86.0    
86.0    
86.1    
86.2    
86.3    
86.4    
86.5    
86.6    
86.7    
86.8    
86.9    
87.0    
87.1    
87.2    
87.2    
87.3    
87.4    
87.5    
87.6    
87.7    
87.8    
87.9    
88.0    
88.1    
88.2    
88.3    
88.4    
88.4    
88.5    
88.6    
88.7    
88.8    
88.9    
89.0    
89.1    
89.2    
89.3    
89.4    
89.5    
89.6    
89.6    
89.7    
89.8    
89.9    
90.0    
90.1    
90.2    
90.3    
90.4    
90.5    
90.6    
90.7    
90.8    
90.9    
90.9    
91.0    
91.1    
91.2    
91.3    
91.4    
91.5    
91.6    
91.7    
91.8    
91.9    
92.0    
92.1    
92.1    
92.2    
92.3    
92.4    
92.5    
92.6    
92.7    
92.8    
92.9    
93.0    
93.1    
93.2    
93.3    
93.3    
93.4    
93.5    
93.6    
93.7    
93.8    
93.9    
94.0    
94.1    
94.2    
94.3    
94.4    
94.5    
94.5    
94.6    
94.7    
94.8    
94.9    
95.0    
95.1    
95.2    
95.3    
95.4    
95.5    
95.6    
95.7    
95.7    
95.8    
95.9    
96.0    
96.1    
96.2    
96.3    
96.4    
96.5    
96.6    
96.7    
96.8    
96.9    
97.0    
97.0    
97.1    
97.2    
97.3    
97.4    
97.5    
97.6    
97.7    
97.8    
97.9    
98.0    
98.1    
98.2    
98.2    
98.3    
98.4    
98.5    
98.6    
98.7    
98.8    
98.9    
99.0    
99.1    
99.2    
99.3    
99.4    
99.4    
99.5    
99.6    
99.7    
99.8    
99.9    
-found 50 predictions from path traversal
Error with prediction: snap lend_intergenic: 9422, rend_intergenic: 5946  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 21807, rend_intergenic: 12265  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 27998, rend_intergenic: 23493  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 29501, rend_intergenic: 28348  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 45178, rend_intergenic: 44481  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 50633, rend_intergenic: 48217  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 63072, rend_intergenic: 54115  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 76851, rend_intergenic: 74400  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 81582, rend_intergenic: 76862  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 106120, rend_intergenic: 82286  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 123408, rend_intergenic: 107828  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 138445, rend_intergenic: 135147  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 161545, rend_intergenic: 157095  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 205689, rend_intergenic: 190987  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 209415, rend_intergenic: 205897  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 215599, rend_intergenic: 209429  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 25 predictions persist after filtering for low support