-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_14/scaffold_14_2326807-2571460 -reading genomic sequence. ** Processing features (+) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: +) -loading gene prediction evidence. (strand: +)Valid prediction for GeneMark_model.58419_t Valid prediction for GlimmerHMM_glimmerT_34166-T1 Valid prediction for GlimmerHMM_glimmerT_34183-T1 Valid prediction for GlimmerHMM_glimmerT_34177-T1 Valid prediction for snap_scaffold_14-snap.429-T1 Valid prediction for snap_scaffold_14-snap.455-T1 Valid prediction for GeneMark_model.58448_t Valid prediction for GeneMark_model.58457_t Valid prediction for snap_scaffold_14-snap.428-T1 Valid prediction for GeneMark_model.58450_t Valid prediction for GeneMark_model.58479_t Valid prediction for GeneMark_model.58480_t Valid prediction for GeneMark_model.58467_t Valid prediction for GeneMark_model.58471_t Valid prediction for Augustus_model.g22971.t1 Valid prediction for GeneMark_model.58473_t Valid prediction for snap_scaffold_14-snap.442-T1 Valid prediction for GlimmerHMM_glimmerT_34162-T1 Valid prediction for GeneMark_model.58453_t Valid prediction for GlimmerHMM_glimmerT_34152-T1 Valid prediction for GeneMark_model.58437_t Valid prediction for snap_scaffold_14-snap.441-T1 Valid prediction for GeneMark_model.58446_t Valid prediction for GeneMark_model.58463_t Valid prediction for snap_scaffold_14-snap.399-T1 Valid prediction for snap_scaffold_14-snap.425-T1 Valid prediction for Augustus_model.g22994.t1 Valid prediction for GeneMark_model.58439_t Valid prediction for snap_scaffold_14-snap.431-T1 Valid prediction for GlimmerHMM_glimmerT_34170-T1 Valid prediction for Augustus_model.g22991.t1 Valid prediction for GeneMark_model.58469_t Valid prediction for snap_scaffold_14-snap.439-T1 Valid prediction for Augustus_model.g22989.t1 Valid prediction for HiQ_model.g22973.t1 Couldn't classify 16114, 16662 Sorry, prediction pasa_asmbl_11833.p1 fails validation. (AAA) GC 16114-16662 AA GTA Valid prediction for snap_scaffold_14-snap.411-T1 Valid prediction for GeneMark_model.58426_t Valid prediction for snap_scaffold_14-snap.438-T1 Valid prediction for snap_scaffold_14-snap.403-T1 Valid prediction for GlimmerHMM_glimmerT_34178-T1 Valid prediction for GlimmerHMM_glimmerT_34173-T1 Valid prediction for snap_scaffold_14-snap.422-T1 Valid prediction for GeneMark_model.58441_t Valid prediction for Augustus_model.g22990.t1 Valid prediction for snap_scaffold_14-snap.408-T1 Valid prediction for GlimmerHMM_glimmerT_34153-T1 Couldn't classify 19933, 20014 Sorry, prediction pasa_asmbl_11834.p1 fails validation. (GGT) CA 19933-20014 GT GGG (ATG) AG 20508-20563 GT CTG (GAT) AG 21740-21803 GT CGG (GCC) AG 22501-22595 GT CTG (GAT) AG 22997-23176 GT AGG (GGC) AG 25926-26063 GT TGG (CAA) AG 26264-26401 GT AGG (ATC) AG 26706-26786 GT CGG (GAC) AG 27799-27922 GT GAG (TGT) AG 28258-28349 GT CTG (GGT) AG 28535-28597 GT GAG (CAA) AG 29030-29149 TC AGT add_exon() Sorry, pasa_asmbl_11834.p1 20508-20563-initial-1 is invalid. -recovered pasa_asmbl_11834.p1, initial, 20508, 20563 add_exon() Sorry, pasa_asmbl_11834.p1 27799-27922-terminal-3 is invalid. -recovered pasa_asmbl_11834.p1, terminal, 27799, 27922 -recovered pasa_asmbl_11834.p1, terminal, 29030, 29149 -recovered pasa_asmbl_11834.p1, internal, 20508, 20563 -recovered pasa_asmbl_11834.p1, internal, 21740, 21803 -recovered pasa_asmbl_11834.p1, internal, 22501, 22595 -recovered pasa_asmbl_11834.p1, internal, 22997, 23176 -recovered pasa_asmbl_11834.p1, internal, 25926, 26063 -recovered pasa_asmbl_11834.p1, internal, 26264, 26401 -recovered pasa_asmbl_11834.p1, internal, 26706, 26786 -recovered pasa_asmbl_11834.p1, internal, 27799, 27922 -recovered pasa_asmbl_11834.p1, internal, 28258, 28349 -recovered pasa_asmbl_11834.p1, internal, 28535, 28597 Couldn't classify 159571, 159796 Sorry, prediction pasa_asmbl_11837.p1 fails validation. (CCC) CT 159571-159796 GT TGG (GTG) AG 159964-160094 GT CGG (ATC) AG 161525-161633 GT AGG (GTA) AG 162798-162925 GT AGG (ACC) AG 163110-163248 GT AGG (TGC) AG 163484-163599 GT AGG (AAC) AG 166440-166564 GT AGG (GGA) AG 166773-166964 GT AGG (TTT) AG 167094-167187 GT AGG (GCT) AG 167399-167515 GT AGG (TCT) AG 167639-167809 GT AGG (GCT) AG 167975-168071 GT AGG (GCA) AG 168166-168311 GT AGG (TGT) AG 168473-168611 GT CGG (CGT) AG 168904-169022 GT AGG (CTA) AG 169388-169567 GT TGG (GTG) AG 169736-169921 GT TGG (ACA) AG 170068-170157 GT AGG (CTG) AG 170453-170593 GA AGG -recovered pasa_asmbl_11837.p1, terminal, 170453, 170593 -recovered pasa_asmbl_11837.p1, internal, 159964, 160094 -recovered pasa_asmbl_11837.p1, internal, 161525, 161633 -recovered pasa_asmbl_11837.p1, internal, 162798, 162925 -recovered pasa_asmbl_11837.p1, internal, 163110, 163248 -recovered pasa_asmbl_11837.p1, internal, 163484, 163599 -recovered pasa_asmbl_11837.p1, internal, 166440, 166564 -recovered pasa_asmbl_11837.p1, internal, 166773, 166964 -recovered pasa_asmbl_11837.p1, internal, 167094, 167187 -recovered pasa_asmbl_11837.p1, internal, 167399, 167515 -recovered pasa_asmbl_11837.p1, internal, 167639, 167809 -recovered pasa_asmbl_11837.p1, internal, 167975, 168071 -recovered pasa_asmbl_11837.p1, internal, 168166, 168311 -recovered pasa_asmbl_11837.p1, internal, 168473, 168611 -recovered pasa_asmbl_11837.p1, internal, 168904, 169022 -recovered pasa_asmbl_11837.p1, internal, 169388, 169567 -recovered pasa_asmbl_11837.p1, internal, 169736, 169921 -recovered pasa_asmbl_11837.p1, internal, 170068, 170157 Valid prediction for GeneMark_model.58477_t Valid prediction for snap_scaffold_14-snap.416-T1 Valid prediction for Augustus_model.g22988.t1 Valid prediction for GeneMark_model.58432_t Valid prediction for snap_scaffold_14-snap.405-T1 Valid prediction for GeneMark_model.58459_t Valid prediction for snap_scaffold_14-snap.444-T1 Valid prediction for GeneMark_model.58465_t Valid prediction for snap_scaffold_14-snap.452-T1 Valid prediction for GeneMark_model.58422_t Valid prediction for GeneMark_model.58421_t Valid prediction for snap_scaffold_14-snap.421-T1 Valid prediction for GlimmerHMM_glimmerT_34171-T1 Valid prediction for GlimmerHMM_glimmerT_34155-T1 Valid prediction for GlimmerHMM_glimmerT_34175-T1 Valid prediction for GlimmerHMM_glimmerT_34151-T1 Valid prediction for snap_scaffold_14-snap.395-T1 Valid prediction for Augustus_model.g22986.t1 Valid prediction for GeneMark_model.58445_t Valid prediction for snap_scaffold_14-snap.454-T1 Valid prediction for Augustus_model.g22972.t1 Valid prediction for snap_scaffold_14-snap.440-T1 Valid prediction for GlimmerHMM_glimmerT_34174-T1 Valid prediction for GeneMark_model.58443_t Valid prediction for snap_scaffold_14-snap.414-T1 Couldn't classify 233733, 234890 Sorry, prediction pasa_asmbl_11848.p1 fails validation. (ATG) AA 233733-234890 TG CAT Valid prediction for GeneMark_model.58428_t Valid prediction for GlimmerHMM_glimmerT_34163-T1 Valid prediction for CodingQuarry_transcript_15546-T1 Valid prediction for GeneMark_model.58452_t Valid prediction for snap_scaffold_14-snap.418-T1 Valid prediction for GeneMark_model.58462_t Valid prediction for snap_scaffold_14-snap.435-T1 Valid prediction for GeneMark_model.58424_t Couldn't classify 158047, 158149 Sorry, prediction pasa_asmbl_11836.p1 fails validation. (ATG) GG 157006-157165 GT AGG (GTT) AG 157416-157496 GT AGG (GTC) AG 157847-157967 GT AGG (GCC) AG 158047-158149 AC TCA -recovered pasa_asmbl_11836.p1, initial, 157006, 157165 -recovered pasa_asmbl_11836.p1, terminal, 157416, 157496 -recovered pasa_asmbl_11836.p1, internal, 157416, 157496 -recovered pasa_asmbl_11836.p1, internal, 157847, 157967 Couldn't classify 233961, 234553 Couldn't classify 234633, 234693 Sorry, prediction CodingQuarry_transcript_15547-T1 fails validation. (ATG) CC 233961-234553 AG AGA (AGC) TC 234633-234693 TG AAT -loading the search evidence (protein and EST search results, strand: +) -scoring exons (strand: +) ** Processing features (-) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: -) -loading gene prediction evidence. (strand: -)Valid prediction for GeneMark_model.58431_t Valid prediction for GlimmerHMM_glimmerT_34164-T1 Valid prediction for GeneMark_model.58436_t Valid prediction for GeneMark_model.58461_t Valid prediction for snap_scaffold_14-snap.433-T1 Valid prediction for snap_scaffold_14-snap.423-T1 Valid prediction for HiQ_model.g22983.t1 Valid prediction for GlimmerHMM_glimmerT_34160-T1 Valid prediction for GeneMark_model.58466_t Valid prediction for snap_scaffold_14-snap.430-T1 Valid prediction for snap_scaffold_14-snap.424-T1 Valid prediction for Augustus_model.g22992.t1 Valid prediction for snap_scaffold_14-snap.446-T1 Valid prediction for Augustus_model.g22984.t1 Valid prediction for Augustus_model.g22978.t1 Valid prediction for snap_scaffold_14-snap.400-T1 Valid prediction for snap_scaffold_14-snap.443-T1 Valid prediction for pasa_asmbl_12943.p1 Valid prediction for GlimmerHMM_glimmerT_34159-T1 Valid prediction for snap_scaffold_14-snap.407-T1 Valid prediction for GeneMark_model.58430_t Valid prediction for GeneMark_model.58444_t Valid prediction for GlimmerHMM_glimmerT_34154-T1 Valid prediction for Augustus_model.g22982.t1 Valid prediction for snap_scaffold_14-snap.417-T1 Valid prediction for GeneMark_model.58442_t Valid prediction for GeneMark_model.58464_t Valid prediction for GlimmerHMM_glimmerT_34182-T1 Valid prediction for snap_scaffold_14-snap.437-T1 Valid prediction for GeneMark_model.58427_t Valid prediction for snap_scaffold_14-snap.432-T1 Valid prediction for Augustus_model.g22981.t1 Valid prediction for GeneMark_model.58476_t Valid prediction for GlimmerHMM_glimmerT_34179-T1 Valid prediction for HiQ_model.g22985.t1 Valid prediction for CodingQuarry_transcript_15538-T1 Valid prediction for snap_scaffold_14-snap.447-T1 Valid prediction for GlimmerHMM_glimmerT_34176-T1 Valid prediction for snap_scaffold_14-snap.450-T1 Couldn't classify 190918, 191081 Sorry, prediction pasa_asmbl_12920.p1 fails validation. (CTG) CT 190918-191081 GT AAG (ATC) AG 192073-192145 GT AGG (GTC) AG 194642-194664 GT AAG (TAC) AG 195373-195570 GT GGG (AGA) AG 196019-196048 GT GCG (TGG) AG 196942-197111 GT CTG (TGC) AG 197237-197273 GT AGG (GGA) AG 197733-197829 AG AAA -recovered pasa_asmbl_12920.p1, terminal, 197733, 197829 -recovered pasa_asmbl_12920.p1, internal, 192073, 192145 -recovered pasa_asmbl_12920.p1, internal, 194642, 194664 -recovered pasa_asmbl_12920.p1, internal, 195373, 195570 -recovered pasa_asmbl_12920.p1, internal, 196019, 196048 -recovered pasa_asmbl_12920.p1, internal, 196942, 197111 -recovered pasa_asmbl_12920.p1, internal, 197237, 197273 Couldn't classify 97323, 97440 Sorry, prediction CodingQuarry_transcript_15544-T1 fails validation. (ATG) TC 97177-97274 GT ATG (GTC) AT 97323-97440 GG AGG -recovered CodingQuarry_transcript_15544-T1, initial, 97177, 97274 Valid prediction for snap_scaffold_14-snap.410-T1 Valid prediction for GlimmerHMM_glimmerT_34168-T1 Valid prediction for GeneMark_model.58460_t Valid prediction for GeneMark_model.58435_t Valid prediction for GeneMark_model.58458_t Valid prediction for snap_scaffold_14-snap.398-T1 Valid prediction for GlimmerHMM_glimmerT_34181-T1 Valid prediction for pasa_asmbl_12934.p1 Valid prediction for GlimmerHMM_glimmerT_34158-T1 Valid prediction for GlimmerHMM_glimmerT_34167-T1 Valid prediction for CodingQuarry_transcript_15542-T1 Valid prediction for snap_scaffold_14-snap.434-T1 Valid prediction for GlimmerHMM_glimmerT_34156-T1 Valid prediction for snap_scaffold_14-snap.419-T1 Valid prediction for GeneMark_model.58429_t Valid prediction for snap_scaffold_14-snap.453-T1 Valid prediction for GeneMark_model.58451_t Valid prediction for GeneMark_model.58468_t Valid prediction for GlimmerHMM_glimmerT_34161-T1 Valid prediction for HiQ_model.g22974.t1 Valid prediction for snap_scaffold_14-snap.415-T1 Valid prediction for GeneMark_model.58434_t Valid prediction for snap_scaffold_14-snap.449-T1 Valid prediction for HiQ_model.g22976.t1 Valid prediction for GeneMark_model.58438_t Valid prediction for snap_scaffold_14-snap.426-T1 Valid prediction for snap_scaffold_14-snap.413-T1 Valid prediction for GlimmerHMM_glimmerT_34172-T1 Valid prediction for GeneMark_model.58420_t Valid prediction for GeneMark_model.58454_t Valid prediction for Augustus_model.g22993.t1 Couldn't classify 135216, 135329 Sorry, prediction Augustus_model.g22980.t1 fails validation. (GAA) AG 135216-135329 GT AGG (TGT) AG 135421-135503 GT TGG (TAA) AG 136521-136626 GT CTG (AGT) AG 138618-138764 GT ATG (CTG) AG 139504-139653 GT AGG (ATC) AG 139736-139907 GT TGG (GCA) AG 140547-140729 GT AGG (AGT) AG 140997-141276 GT AGG (CTC) AG 142914-143288 GT AGG (AGA) AG 143564-143688 GT AGG (GCT) AG 144076-144234 GT GGG (CTG) AG 145994-146141 GT AGG (TGA) AG 147228-147522 GT AGG (CCT) AG 147730-148018 GT AGG (TTT) AG 148133-148251 GT GGG (CCA) AG 148457-148585 GT TTG (GTA) AG 148987-149024 GT AGG (CCC) AG 149343-149479 GT AGG (GTG) AG 150008-150039 AA AGA -recovered Augustus_model.g22980.t1, terminal, 150008, 150039 -recovered Augustus_model.g22980.t1, internal, 135216, 135329 -recovered Augustus_model.g22980.t1, internal, 135421, 135503 -recovered Augustus_model.g22980.t1, internal, 136521, 136626 -recovered Augustus_model.g22980.t1, internal, 138618, 138764 -recovered Augustus_model.g22980.t1, internal, 139504, 139653 -recovered Augustus_model.g22980.t1, internal, 139736, 139907 -recovered Augustus_model.g22980.t1, internal, 140547, 140729 -recovered Augustus_model.g22980.t1, internal, 140997, 141276 -recovered Augustus_model.g22980.t1, internal, 142914, 143288 -recovered Augustus_model.g22980.t1, internal, 143564, 143688 -recovered Augustus_model.g22980.t1, internal, 144076, 144234 -recovered Augustus_model.g22980.t1, internal, 145994, 146141 -recovered Augustus_model.g22980.t1, internal, 147228, 147522 -recovered Augustus_model.g22980.t1, internal, 147730, 148018 -recovered Augustus_model.g22980.t1, internal, 148133, 148251 -recovered Augustus_model.g22980.t1, internal, 148457, 148585 -recovered Augustus_model.g22980.t1, internal, 148987, 149024 -recovered Augustus_model.g22980.t1, internal, 149343, 149479 Valid prediction for GeneMark_model.58433_t Valid prediction for Augustus_model.g22977.t1 Valid prediction for CodingQuarry_transcript_15536-T1 Valid prediction for snap_scaffold_14-snap.445-T1 Valid prediction for snap_scaffold_14-snap.402-T1 Valid prediction for GeneMark_model.58418_t Valid prediction for GeneMark_model.58447_t Valid prediction for GeneMark_model.58456_t Valid prediction for snap_scaffold_14-snap.409-T1 Valid prediction for Augustus_model.g22979.t1 Valid prediction for Augustus_model.g22987.t1 Valid prediction for snap_scaffold_14-snap.412-T1 Valid prediction for GeneMark_model.58455_t Valid prediction for CodingQuarry_transcript_15545-T1 Valid prediction for CodingQuarry_transcript_15541-T1 Valid prediction for snap_scaffold_14-snap.404-T1 Valid prediction for GlimmerHMM_glimmerT_34165-T1 Couldn't classify 69404, 69603 Sorry, prediction pasa_asmbl_12945.p1 fails validation. (CTG) CA 69404-69603 GT ATG (TCT) AG 69760-69927 GT AGG (GCT) AG 70021-70194 GT AAG (GTT) AG 70706-70870 GT TGG (TCT) AG 71058-71104 GT ATG (ATG) AG 71204-71733 TC AGT -recovered pasa_asmbl_12945.p1, terminal, 71204, 71733 -recovered pasa_asmbl_12945.p1, internal, 69760, 69927 -recovered pasa_asmbl_12945.p1, internal, 70021, 70194 -recovered pasa_asmbl_12945.p1, internal, 70706, 70870 -recovered pasa_asmbl_12945.p1, internal, 71058, 71104 Valid prediction for snap_scaffold_14-snap.406-T1 Valid prediction for GeneMark_model.58475_t Valid prediction for snap_scaffold_14-snap.451-T1 Valid prediction for Augustus_model.g22975.t1 Valid prediction for snap_scaffold_14-snap.427-T1 Valid prediction for snap_scaffold_14-snap.401-T1 Valid prediction for GeneMark_model.58423_t Valid prediction for GeneMark_model.58470_t Valid prediction for snap_scaffold_14-snap.448-T1 Valid prediction for GeneMark_model.58449_t Valid prediction for snap_scaffold_14-snap.436-T1 Valid prediction for snap_scaffold_14-snap.394-T1 Valid prediction for snap_scaffold_14-snap.397-T1 Valid prediction for GlimmerHMM_glimmerT_34180-T1 Valid prediction for GlimmerHMM_glimmerT_34157-T1 Valid prediction for snap_scaffold_14-snap.420-T1 Valid prediction for GeneMark_model.58478_t Valid prediction for GlimmerHMM_glimmerT_34169-T1 Valid prediction for GeneMark_model.58425_t Valid prediction for snap_scaffold_14-snap.396-T1 Valid prediction for GeneMark_model.58474_t Valid prediction for GeneMark_model.58440_t -loading the search evidence (protein and EST search results, strand: -) -scoring exons (strand: -)Error with prediction: snap lend_intergenic: 14908, rend_intergenic: 7299 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 17668, rend_intergenic: 15980 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 29598, rend_intergenic: 17793 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 46821, rend_intergenic: 40738 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 48340, rend_intergenic: 46826 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 52545, rend_intergenic: 49323 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 55780, rend_intergenic: 52693 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 63825, rend_intergenic: 61823 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 69916, rend_intergenic: 67769 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 77455, rend_intergenic: 74689 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 101989, rend_intergenic: 95692 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 124750, rend_intergenic: 118251 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 133194, rend_intergenic: 125821 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 135874, rend_intergenic: 133295 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 147478, rend_intergenic: 143685 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 154352, rend_intergenic: 150137 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 163792, rend_intergenic: 156300 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 172180, rend_intergenic: 166215 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 173470, rend_intergenic: 172922 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 197217, rend_intergenic: 192269 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 197839, rend_intergenic: 197362 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 217413, rend_intergenic: 198332 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 229448, rend_intergenic: 223277 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 238033, rend_intergenic: 236625 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -building DP trellis -building trellis in range 1 - 244654 -exon list size: 976 building trellis 0.1 0.2 0.3 0.4 0.5 0.6 0.7 0.8 0.9 1.0 1.1 1.2 1.3 1.4 1.5 1.6 1.7 1.8 1.9 2.0 2.1 2.2 2.4 2.5 2.6 2.7 2.8 2.9 3.0 3.1 3.2 3.3 3.4 3.5 3.6 3.7 3.8 3.9 4.0 4.1 4.2 4.3 4.4 4.5 4.6 4.7 4.8 4.9 5.0 5.1 5.2 5.3 5.4 5.5 5.6 5.7 5.8 5.9 6.0 6.1 6.2 6.3 6.4 6.5 6.6 6.7 6.9 7.0 7.1 7.2 7.3 7.4 7.5 7.6 7.7 7.8 7.9 8.0 8.1 8.2 8.3 8.4 8.5 8.6 8.7 8.8 8.9 9.0 9.1 9.2 9.3 9.4 9.5 9.6 9.7 9.8 9.9 10.0 10.1 10.2 10.3 10.4 10.5 10.6 10.7 10.8 10.9 11.0 11.1 11.2 11.3 11.5 11.6 11.7 11.8 11.9 12.0 12.1 12.2 12.3 12.4 12.5 12.6 12.7 12.8 12.9 13.0 13.1 13.2 13.3 13.4 13.5 13.6 13.7 13.8 13.9 14.0 14.1 14.2 14.3 14.4 14.5 14.6 14.7 14.8 14.9 15.0 15.1 15.2 15.3 15.4 15.5 15.6 15.7 15.8 16.0 16.1 16.2 16.3 16.4 16.5 16.6 16.7 16.8 16.9 17.0 17.1 17.2 17.3 17.4 17.5 17.6 17.7 17.8 17.9 18.0 18.1 18.2 18.3 18.4 18.5 18.6 18.7 18.8 18.9 19.0 19.1 19.2 19.3 19.4 19.5 19.6 19.7 19.8 19.9 20.0 20.1 20.2 20.3 20.4 20.6 20.7 20.8 20.9 21.0 21.1 21.2 21.3 21.4 21.5 21.6 21.7 21.8 21.9 22.0 22.1 22.2 22.3 22.4 22.5 22.6 22.7 22.8 22.9 23.0 23.1 23.2 23.3 23.4 23.5 23.6 23.7 23.8 23.9 24.0 24.1 24.2 24.3 24.4 24.5 24.6 24.7 24.8 24.9 25.1 25.2 25.3 25.4 25.5 25.6 25.7 25.8 25.9 26.0 26.1 26.2 26.3 26.4 26.5 26.6 26.7 26.8 26.9 27.0 27.1 27.2 27.3 27.4 27.5 27.6 27.7 27.8 27.9 28.0 28.1 28.2 28.3 28.4 28.5 28.6 28.7 28.8 28.9 29.0 29.1 29.2 29.3 29.4 29.6 29.7 29.8 29.9 30.0 30.1 30.2 30.3 30.4 30.5 30.6 30.7 30.8 30.9 31.0 31.1 31.2 31.3 31.4 31.5 31.6 31.7 31.8 31.9 32.0 32.1 32.2 32.3 32.4 32.5 32.6 32.7 32.8 32.9 33.0 33.1 33.2 33.3 33.4 33.5 33.6 33.7 33.8 33.9 34.0 34.2 34.3 34.4 34.5 34.6 34.7 34.8 34.9 35.0 35.1 35.2 35.3 35.4 35.5 35.6 35.7 35.8 35.9 36.0 36.1 36.2 36.3 36.4 36.5 36.6 36.7 36.8 36.9 37.0 37.1 37.2 37.3 37.4 37.5 37.6 37.7 37.8 37.9 38.0 38.1 38.2 38.3 38.4 38.5 38.7 38.8 38.9 39.0 39.1 39.2 39.3 39.4 39.5 39.6 39.7 39.8 39.9 40.0 40.1 40.2 40.3 40.4 40.5 40.6 40.7 40.8 40.9 41.0 41.1 41.2 41.3 41.4 41.5 41.6 41.7 41.8 41.9 42.0 42.1 42.2 42.3 42.4 42.5 42.6 42.7 42.8 42.9 43.0 43.1 43.3 43.4 43.5 43.6 43.7 43.8 43.9 44.0 44.1 44.2 44.3 44.4 44.5 44.6 44.7 44.8 44.9 45.0 45.1 45.2 45.3 45.4 45.5 45.6 45.7 45.8 45.9 46.0 46.1 46.2 46.3 46.4 46.5 46.6 46.7 46.8 46.9 47.0 47.1 47.2 47.3 47.4 47.5 47.6 47.8 47.9 48.0 48.1 48.2 48.3 48.4 48.5 48.6 48.7 48.8 48.9 49.0 49.1 49.2 49.3 49.4 49.5 49.6 49.7 49.8 49.9 50.0 50.1 50.2 50.3 50.4 50.5 50.6 50.7 50.8 50.9 51.0 51.1 51.2 51.3 51.4 51.5 51.6 51.7 51.8 51.9 52.0 52.1 52.2 52.4 52.5 52.6 52.7 52.8 52.9 53.0 53.1 53.2 53.3 53.4 53.5 53.6 53.7 53.8 53.9 54.0 54.1 54.2 54.3 54.4 54.5 54.6 54.7 54.8 54.9 55.0 55.1 55.2 55.3 55.4 55.5 55.6 55.7 55.8 55.9 56.0 56.1 56.2 56.3 56.4 56.5 56.6 56.7 56.9 57.0 57.1 57.2 57.3 57.4 57.5 57.6 57.7 57.8 57.9 58.0 58.1 58.2 58.3 58.4 58.5 58.6 58.7 58.8 58.9 59.0 59.1 59.2 59.3 59.4 59.5 59.6 59.7 59.8 59.9 60.0 60.1 60.2 60.3 60.4 60.5 60.6 60.7 60.8 60.9 61.0 61.1 61.2 61.3 61.5 61.6 61.7 61.8 61.9 62.0 62.1 62.2 62.3 62.4 62.5 62.6 62.7 62.8 62.9 63.0 63.1 63.2 63.3 63.4 63.5 63.6 63.7 63.8 63.9 64.0 64.1 64.2 64.3 64.4 64.5 64.6 64.7 64.8 64.9 65.0 65.1 65.2 65.3 65.4 65.5 65.6 65.7 65.8 66.0 66.1 66.2 66.3 66.4 66.5 66.6 66.7 66.8 66.9 67.0 67.1 67.2 67.3 67.4 67.5 67.6 67.7 67.8 67.9 68.0 68.1 68.2 68.3 68.4 68.5 68.6 68.7 68.8 68.9 69.0 69.1 69.2 69.3 69.4 69.5 69.6 69.7 69.8 69.9 70.0 70.1 70.2 70.3 70.4 70.6 70.7 70.8 70.9 71.0 71.1 71.2 71.3 71.4 71.5 71.6 71.7 71.8 71.9 72.0 72.1 72.2 72.3 72.4 72.5 72.6 72.7 72.8 72.9 73.0 73.1 73.2 73.3 73.4 73.5 73.6 73.7 73.8 73.9 74.0 74.1 74.2 74.3 74.4 74.5 74.6 74.7 74.8 74.9 75.1 75.2 75.3 75.4 75.5 75.6 75.7 75.8 75.9 76.0 76.1 76.2 76.3 76.4 76.5 76.6 76.7 76.8 76.9 77.0 77.1 77.2 77.3 77.4 77.5 77.6 77.7 77.8 77.9 78.0 78.1 78.2 78.3 78.4 78.5 78.6 78.7 78.8 78.9 79.0 79.1 79.2 79.3 79.4 79.6 79.7 79.8 79.9 80.0 80.1 80.2 80.3 80.4 80.5 80.6 80.7 80.8 80.9 81.0 81.1 81.2 81.3 81.4 81.5 81.6 81.7 81.8 81.9 82.0 82.1 82.2 82.3 82.4 82.5 82.6 82.7 82.8 82.9 83.0 83.1 83.2 83.3 83.4 83.5 83.6 83.7 83.8 83.9 84.0 84.2 84.3 84.4 84.5 84.6 84.7 84.8 84.9 85.0 85.1 85.2 85.3 85.4 85.5 85.6 85.7 85.8 85.9 86.0 86.1 86.2 86.3 86.4 86.5 86.6 86.7 86.8 86.9 87.0 87.1 87.2 87.3 87.4 87.5 87.6 87.7 87.8 87.9 88.0 88.1 88.2 88.3 88.4 88.5 88.7 88.8 88.9 89.0 89.1 89.2 89.3 89.4 89.5 89.6 89.7 89.8 89.9 90.0 90.1 90.2 90.3 90.4 90.5 90.6 90.7 90.8 90.9 91.0 91.1 91.2 91.3 91.4 91.5 91.6 91.7 91.8 91.9 92.0 92.1 92.2 92.3 92.4 92.5 92.6 92.7 92.8 92.9 93.0 93.1 93.3 93.4 93.5 93.6 93.7 93.8 93.9 94.0 94.1 94.2 94.3 94.4 94.5 94.6 94.7 94.8 94.9 95.0 95.1 95.2 95.3 95.4 95.5 95.6 95.7 95.8 95.9 96.0 96.1 96.2 96.3 96.4 96.5 96.6 96.7 96.8 96.9 97.0 97.1 97.2 97.3 97.4 97.5 97.6 97.8 97.9 98.0 98.1 98.2 98.3 98.4 98.5 98.6 98.7 98.8 98.9 99.0 99.1 99.2 99.3 99.4 99.5 99.6 99.7 99.8 99.9 -found 41 predictions from path traversal Error with prediction: snap lend_intergenic: 14908, rend_intergenic: 7299 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 17668, rend_intergenic: 15980 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 29598, rend_intergenic: 17793 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 46821, rend_intergenic: 40738 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 48340, rend_intergenic: 46826 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 52545, rend_intergenic: 49323 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 55780, rend_intergenic: 52693 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 63825, rend_intergenic: 61823 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 69916, rend_intergenic: 67769 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 77455, rend_intergenic: 74689 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 101989, rend_intergenic: 95692 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 124750, rend_intergenic: 118251 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 133194, rend_intergenic: 125821 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 135874, rend_intergenic: 133295 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 147478, rend_intergenic: 143685 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 154352, rend_intergenic: 150137 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 163792, rend_intergenic: 156300 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 172180, rend_intergenic: 166215 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 173470, rend_intergenic: 172922 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 197217, rend_intergenic: 192269 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 197839, rend_intergenic: 197362 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 217413, rend_intergenic: 198332 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 229448, rend_intergenic: 223277 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 238033, rend_intergenic: 236625 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -reporting highest scoring path thru the trellis. -found 29 predictions persist after filtering for low support