-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_14/scaffold_14_15917462-16111827

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for GlimmerHMM_glimmerT_36119-T1
Valid prediction for snap_scaffold_14-snap.3385-T1
Couldn't classify 132021, 132036
Sorry, prediction pasa_asmbl_12649.p1 fails validation.
(GAG)	 GG	132021-132036	GT	AGG
(GTG)	 AG	132207-132256	GT	CTG
(GTG)	 AG	132848-132967	GT	CGG
(GAC)	 AG	133183-133268	GT	AAG
(GGA)	 AG	133363-133407	GT	ATG
(AGT)	 AG	133736-133827	GT	TGG
(TCA)	 AG	134190-134310	GT	AGG
(TGA)	 AG	134584-134665	GT	TGG
(ATG)	 AG	135557-135616	GT	AGG
(CTC)	 AG	135708-135865	GT	AAG
(GTT)	 AG	136266-136327	GT	AGG
(AGC)	 AG	136442-136899	GT	CGG
(TTC)	 AG	138733-138810	GT	AGG
(CAC)	 AG	138934-139059	GT	AGG
(GAA)	 AG	139257-139313	CC	GAC
-recovered pasa_asmbl_12649.p1, initial, 135557, 135616
-recovered pasa_asmbl_12649.p1, terminal, 139257, 139313
-recovered pasa_asmbl_12649.p1, internal, 132207, 132256
-recovered pasa_asmbl_12649.p1, internal, 132848, 132967
-recovered pasa_asmbl_12649.p1, internal, 133183, 133268
-recovered pasa_asmbl_12649.p1, internal, 133363, 133407
-recovered pasa_asmbl_12649.p1, internal, 133736, 133827
-recovered pasa_asmbl_12649.p1, internal, 134190, 134310
-recovered pasa_asmbl_12649.p1, internal, 134584, 134665
-recovered pasa_asmbl_12649.p1, internal, 135557, 135616
-recovered pasa_asmbl_12649.p1, internal, 135708, 135865
-recovered pasa_asmbl_12649.p1, internal, 136266, 136327
-recovered pasa_asmbl_12649.p1, internal, 136442, 136899
-recovered pasa_asmbl_12649.p1, internal, 138733, 138810
-recovered pasa_asmbl_12649.p1, internal, 138934, 139059
Valid prediction for GeneMark_model.62003_t
Valid prediction for GeneMark_model.62011_t
Valid prediction for GeneMark_model.61991_t
Valid prediction for GeneMark_model.62004_t
Valid prediction for GeneMark_model.62023_t
Couldn't classify 28502, 28579
Sorry, prediction pasa_asmbl_12634.p2 fails validation.
(GGA)	 CA	28502-28579	GT	CTG
(GAC)	 AG	29237-29308	GT	CTG
(AAC)	 AG	29572-29726	GT	AAG
(AGC)	 AG	30112-30190	GC	AGG
-recovered pasa_asmbl_12634.p2, terminal, 30112, 30190
-recovered pasa_asmbl_12634.p2, internal, 29237, 29308
-recovered pasa_asmbl_12634.p2, internal, 29572, 29726
-recovered pasa_asmbl_12634.p2, internal, 30112, 30190
Valid prediction for GeneMark_model.62019_t
Valid prediction for snap_scaffold_14-snap.3372-T1
Valid prediction for Augustus_model.g24321.t1
Valid prediction for GeneMark_model.62017_t
Valid prediction for GlimmerHMM_glimmerT_36133-T1
Valid prediction for GlimmerHMM_glimmerT_36137-T1
Valid prediction for GlimmerHMM_glimmerT_36120-T1
Valid prediction for GeneMark_model.62009_t
Valid prediction for snap_scaffold_14-snap.3381-T1
Valid prediction for Augustus_model.g24317.t1
Valid prediction for GlimmerHMM_glimmerT_36134-T1
Valid prediction for snap_scaffold_14-snap.3350-T1
Sorry, intron length (9) is less than minimum required (10)
Valid prediction for snap_scaffold_14-snap.3345-T1
Valid prediction for snap_scaffold_14-snap.3380-T1
Valid prediction for GeneMark_model.61995_t
Valid prediction for GeneMark_model.61985_t
Valid prediction for GeneMark_model.61997_t
Couldn't classify 120157, 120346
Couldn't classify 122322, 122453
Sorry, prediction pasa_asmbl_12646.p1 fails validation.
(GAG)	 TC	120157-120346	GT	GGG
(GTT)	 AG	120457-120506	GT	AGG
(GAC)	 AG	120811-120888	GT	GGG
(GTC)	 AG	121420-121476	GT	GGG
(CTA)	 AG	122322-122453	AA	GGA
-recovered pasa_asmbl_12646.p1, internal, 120457, 120506
-recovered pasa_asmbl_12646.p1, internal, 120811, 120888
-recovered pasa_asmbl_12646.p1, internal, 121420, 121476
Valid prediction for Augustus_model.g24318.t1
Valid prediction for GlimmerHMM_glimmerT_36114-T1
Valid prediction for GeneMark_model.62012_t
Valid prediction for HiQ_model.g24316.t1
Valid prediction for GeneMark_model.62035_t
Valid prediction for GlimmerHMM_glimmerT_36125-T1
Valid prediction for snap_scaffold_14-snap.3355-T1
Valid prediction for snap_scaffold_14-snap.3371-T1
Valid prediction for GeneMark_model.61981_t
Valid prediction for snap_scaffold_14-snap.3363-T1
Valid prediction for GlimmerHMM_glimmerT_36126-T1
Valid prediction for GeneMark_model.61993_t
Valid prediction for snap_scaffold_14-snap.3384-T1
Valid prediction for snap_scaffold_14-snap.3349-T1
Valid prediction for GlimmerHMM_glimmerT_36112-T1
Couldn't classify 108600, 108689
Sorry, prediction pasa_asmbl_12638.p1 fails validation.
(ATG)	 AG	105840-106134	GT	CGG
(AGT)	 AG	106353-106436	GT	GGG
(TGA)	 AG	106633-106721	GT	AGG
(CTA)	 AG	107223-107408	GT	AGG
(GTA)	 AG	107871-108008	GT	AGG
(GGT)	 AG	108600-108689	AT	GGA
-recovered pasa_asmbl_12638.p1, initial, 105840, 106134
-recovered pasa_asmbl_12638.p1, internal, 105840, 106134
-recovered pasa_asmbl_12638.p1, internal, 106353, 106436
-recovered pasa_asmbl_12638.p1, internal, 106633, 106721
-recovered pasa_asmbl_12638.p1, internal, 107223, 107408
-recovered pasa_asmbl_12638.p1, internal, 107871, 108008
Valid prediction for GeneMark_model.62014_t
Valid prediction for CodingQuarry_transcript_15920-T1
Valid prediction for snap_scaffold_14-snap.3343-T1
Valid prediction for GeneMark_model.62034_t
Valid prediction for GeneMark_model.62027_t
Valid prediction for snap_scaffold_14-snap.3373-T1
Valid prediction for GeneMark_model.62001_t
Valid prediction for GlimmerHMM_glimmerT_36123-T1
Valid prediction for GeneMark_model.62020_t
Valid prediction for Augustus_model.g24314.t1
Valid prediction for snap_scaffold_14-snap.3357-T1
Valid prediction for GeneMark_model.62032_t
Valid prediction for GeneMark_model.62030_t
Valid prediction for snap_scaffold_14-snap.3378-T1
Valid prediction for GlimmerHMM_glimmerT_36132-T1
Valid prediction for GlimmerHMM_glimmerT_36130-T1
Valid prediction for snap_scaffold_14-snap.3386-T1
Valid prediction for GeneMark_model.62016_t
Valid prediction for snap_scaffold_14-snap.3369-T1
Sorry, intron length (9) is less than minimum required (10)
Valid prediction for GeneMark_model.62029_t
Valid prediction for GlimmerHMM_glimmerT_36117-T1
Valid prediction for GeneMark_model.61987_t
Couldn't classify 106353, 106436
Sorry, prediction Augustus_model.g24322.t1 fails validation.
(ATG)	 CA	105846-106134	GT	CGG
(AGT)	 AG	106353-106436	GT	GGG
-recovered Augustus_model.g24322.t1, initial, 105846, 106134
-recovered Augustus_model.g24322.t1, internal, 106353, 106436
Valid prediction for pasa_asmbl_12648.p1
Valid prediction for GeneMark_model.61999_t
Valid prediction for GlimmerHMM_glimmerT_36121-T1
Valid prediction for snap_scaffold_14-snap.3347-T1
Valid prediction for GlimmerHMM_glimmerT_36131-T1
Valid prediction for CodingQuarry_transcript_15921-T1
Valid prediction for snap_scaffold_14-snap.3367-T1
Valid prediction for snap_scaffold_14-snap.3360-T1
Valid prediction for Augustus_model.g24315.t1
Valid prediction for GeneMark_model.62006_t
Valid prediction for GlimmerHMM_glimmerT_36128-T1
Couldn't classify 22944, 23003
Couldn't classify 27438, 27548
Sorry, prediction pasa_asmbl_12631.p1 fails validation.
(GAG)	 CA	22944-23003	GT	AGG
(CGC)	 AG	25251-25315	GT	AGG
(GAA)	 AG	25533-25599	GT	AGG
(GGG)	 AG	25779-25897	GT	AGG
(AGA)	 AG	26580-26660	GT	AGG
(GCA)	 AG	26841-26953	GT	CGG
(ATA)	 AG	27159-27307	GT	GGG
(AAC)	 AG	27438-27548	GG	TAG
-recovered pasa_asmbl_12631.p1, internal, 25251, 25315
-recovered pasa_asmbl_12631.p1, internal, 25533, 25599
-recovered pasa_asmbl_12631.p1, internal, 25779, 25897
-recovered pasa_asmbl_12631.p1, internal, 26580, 26660
-recovered pasa_asmbl_12631.p1, internal, 26841, 26953
-recovered pasa_asmbl_12631.p1, internal, 27159, 27307
Valid prediction for snap_scaffold_14-snap.3366-T1
Valid prediction for Augustus_model.g24319.t1
Valid prediction for GeneMark_model.61983_t
Couldn't classify 119701, 119834
Sorry, prediction pasa_asmbl_12643.p1 fails validation.
(ATG)	 AC	112996-113250	GT	GGG
(GCC)	 AG	116024-116124	GT	AGG
(GTA)	 AG	117334-117394	GT	AGG
(CCC)	 AG	117529-117566	GT	ACG
(GAA)	 AG	118278-118449	GT	AGG
(GTG)	 AG	118618-118767	GT	AGG
(GCA)	 AG	119251-119383	GT	GGG
(GTA)	 AG	119701-119834	AC	GGA
-recovered pasa_asmbl_12643.p1, initial, 112996, 113250
-recovered pasa_asmbl_12643.p1, internal, 116024, 116124
-recovered pasa_asmbl_12643.p1, internal, 117334, 117394
-recovered pasa_asmbl_12643.p1, internal, 117529, 117566
-recovered pasa_asmbl_12643.p1, internal, 118278, 118449
-recovered pasa_asmbl_12643.p1, internal, 118618, 118767
-recovered pasa_asmbl_12643.p1, internal, 119251, 119383
Valid prediction for GlimmerHMM_glimmerT_36116-T1
Valid prediction for snap_scaffold_14-snap.3364-T1
Valid prediction for GeneMark_model.61989_t

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for GeneMark_model.61984_t
Valid prediction for snap_scaffold_14-snap.3376-T1
Valid prediction for GeneMark_model.62002_t
Valid prediction for GeneMark_model.61990_t
Valid prediction for GlimmerHMM_glimmerT_36127-T1
Valid prediction for GeneMark_model.61988_t
Valid prediction for snap_scaffold_14-snap.3359-T1
Valid prediction for snap_scaffold_14-snap.3353-T1
Valid prediction for GeneMark_model.61986_t
Valid prediction for GeneMark_model.62010_t
Couldn't classify 4143, 4255
Sorry, prediction pasa_asmbl_13751.p2 fails validation.
(TGT)	 TG	4143-4255	GT	ATG
(CCT)	 AG	4473-4616	GT	AGG
(GAA)	 AG	5056-5213	GT	AGG
(GAT)	 AG	5328-5581	GG	GAG
-recovered pasa_asmbl_13751.p2, terminal, 5328, 5581
-recovered pasa_asmbl_13751.p2, internal, 4473, 4616
-recovered pasa_asmbl_13751.p2, internal, 5056, 5213
Valid prediction for GeneMark_model.62007_t
Valid prediction for GlimmerHMM_glimmerT_36115-T1
Valid prediction for snap_scaffold_14-snap.3368-T1
Valid prediction for GeneMark_model.62025_t
Valid prediction for GeneMark_model.61992_t
Valid prediction for GeneMark_model.61982_t
Valid prediction for GeneMark_model.61994_t
Valid prediction for GeneMark_model.62015_t
Valid prediction for HiQ_model.g24320.t1
Valid prediction for GeneMark_model.62033_t
Valid prediction for snap_scaffold_14-snap.3370-T1
Valid prediction for snap_scaffold_14-snap.3351-T1
Valid prediction for GlimmerHMM_glimmerT_36113-T1
Valid prediction for snap_scaffold_14-snap.3374-T1
Valid prediction for snap_scaffold_14-snap.3346-T1
Valid prediction for GeneMark_model.62022_t
Valid prediction for snap_scaffold_14-snap.3348-T1
Sorry, intron length (3) is less than minimum required (10)
Valid prediction for GeneMark_model.62005_t
Valid prediction for snap_scaffold_14-snap.3383-T1
Valid prediction for GeneMark_model.62008_t
Valid prediction for snap_scaffold_14-snap.3377-T1
Valid prediction for snap_scaffold_14-snap.3387-T1
Valid prediction for snap_scaffold_14-snap.3352-T1
Valid prediction for snap_scaffold_14-snap.3379-T1
Valid prediction for GlimmerHMM_glimmerT_36138-T1
Valid prediction for GeneMark_model.62013_t
Valid prediction for GlimmerHMM_glimmerT_36118-T1
Valid prediction for GlimmerHMM_glimmerT_36129-T1
Valid prediction for snap_scaffold_14-snap.3362-T1
Valid prediction for GeneMark_model.62018_t
Valid prediction for snap_scaffold_14-snap.3375-T1
Valid prediction for snap_scaffold_14-snap.3354-T1
Valid prediction for GeneMark_model.62031_t
Couldn't classify 3451, 3582
Sorry, prediction pasa_asmbl_13752.p1 fails validation.
(ATG)	 AG	2023-2082	GT	AGG
(TGC)	 AG	2413-2478	GT	AGG
(GTG)	 AG	2716-2844	GT	AGG
(AGG)	 AG	3451-3582	GG	AGG
-recovered pasa_asmbl_13752.p1, initial, 2023, 2082
-recovered pasa_asmbl_13752.p1, internal, 2023, 2082
-recovered pasa_asmbl_13752.p1, internal, 2413, 2478
-recovered pasa_asmbl_13752.p1, internal, 2716, 2844
Valid prediction for GeneMark_model.62000_t
Valid prediction for snap_scaffold_14-snap.3365-T1
Valid prediction for GeneMark_model.61996_t
Valid prediction for snap_scaffold_14-snap.3356-T1
Valid prediction for GeneMark_model.62024_t
Valid prediction for GeneMark_model.62026_t
Valid prediction for GlimmerHMM_glimmerT_36124-T1
Valid prediction for snap_scaffold_14-snap.3344-T1
Valid prediction for GeneMark_model.62028_t
Valid prediction for GeneMark_model.62021_t
Valid prediction for GlimmerHMM_glimmerT_36135-T1
Valid prediction for snap_scaffold_14-snap.3382-T1
Valid prediction for snap_scaffold_14-snap.3358-T1
Valid prediction for GeneMark_model.62036_t
Valid prediction for GlimmerHMM_glimmerT_36136-T1
Valid prediction for GlimmerHMM_glimmerT_36122-T1
Valid prediction for GlimmerHMM_glimmerT_36139-T1
Valid prediction for snap_scaffold_14-snap.3361-T1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 5367, rend_intergenic: 4064  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 9297, rend_intergenic: 5397  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 17947, rend_intergenic: 14738  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 21511, rend_intergenic: 19223  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 30385, rend_intergenic: 21921  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 57911, rend_intergenic: 36226  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 58529, rend_intergenic: 58271  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 59652, rend_intergenic: 58788  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 60235, rend_intergenic: 59679  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 71820, rend_intergenic: 60245  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 73066, rend_intergenic: 72652  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 81249, rend_intergenic: 73088  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 87989, rend_intergenic: 84761  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 89274, rend_intergenic: 88981  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 106169, rend_intergenic: 89844  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 110332, rend_intergenic: 106270  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 139313, rend_intergenic: 130594  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 156688, rend_intergenic: 153593  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 161155, rend_intergenic: 157455  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 182330, rend_intergenic: 171016  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 192214, rend_intergenic: 188232  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 194366
-exon list size: 957


building trellis

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30.8    
30.9    
31.0    
31.1    
31.2    
31.3    
31.4    
31.5    
31.6    
31.7    
31.8    
31.9    
32.0    
32.1    
32.2    
32.3    
32.4    
32.5    
32.6    
32.7    
32.8    
33.0    
33.1    
33.2    
33.3    
33.4    
33.5    
33.6    
33.7    
33.8    
33.9    
34.0    
34.1    
34.2    
34.3    
34.4    
34.5    
34.6    
34.7    
34.8    
34.9    
35.0    
35.1    
35.2    
35.3    
35.5    
35.6    
35.7    
35.8    
35.9    
36.0    
36.1    
36.2    
36.3    
36.4    
36.5    
36.6    
36.7    
36.8    
36.9    
37.0    
37.1    
37.2    
37.3    
37.4    
37.5    
37.6    
37.7    
37.9    
38.0    
38.1    
38.2    
38.3    
38.4    
38.5    
38.6    
38.7    
38.8    
38.9    
39.0    
39.1    
39.2    
39.3    
39.4    
39.5    
39.6    
39.7    
39.8    
39.9    
40.0    
40.1    
40.3    
40.4    
40.5    
40.6    
40.7    
40.8    
40.9    
41.0    
41.1    
41.2    
41.3    
41.4    
41.5    
41.6    
41.7    
41.8    
41.9    
42.0    
42.1    
42.2    
42.3    
42.4    
42.5    
42.6    
42.8    
42.9    
43.0    
43.1    
43.2    
43.3    
43.4    
43.5    
43.6    
43.7    
43.8    
43.9    
44.0    
44.1    
44.2    
44.3    
44.4    
44.5    
44.6    
44.7    
44.8    
44.9    
45.0    
45.2    
45.3    
45.4    
45.5    
45.6    
45.7    
45.8    
45.9    
46.0    
46.1    
46.2    
46.3    
46.4    
46.5    
46.6    
46.7    
46.8    
46.9    
47.0    
47.1    
47.2    
47.3    
47.4    
47.5    
47.7    
47.8    
47.9    
48.0    
48.1    
48.2    
48.3    
48.4    
48.5    
48.6    
48.7    
48.8    
48.9    
49.0    
49.1    
49.2    
49.3    
49.4    
49.5    
49.6    
49.7    
49.8    
49.9    
50.1    
50.2    
50.3    
50.4    
50.5    
50.6    
50.7    
50.8    
50.9    
51.0    
51.1    
51.2    
51.3    
51.4    
51.5    
51.6    
51.7    
51.8    
51.9    
52.0    
52.1    
52.2    
52.3    
52.5    
52.6    
52.7    
52.8    
52.9    
53.0    
53.1    
53.2    
53.3    
53.4    
53.5    
53.6    
53.7    
53.8    
53.9    
54.0    
54.1    
54.2    
54.3    
54.4    
54.5    
54.6    
54.7    
54.8    
55.0    
55.1    
55.2    
55.3    
55.4    
55.5    
55.6    
55.7    
55.8    
55.9    
56.0    
56.1    
56.2    
56.3    
56.4    
56.5    
56.6    
56.7    
56.8    
56.9    
57.0    
57.1    
57.2    
57.4    
57.5    
57.6    
57.7    
57.8    
57.9    
58.0    
58.1    
58.2    
58.3    
58.4    
58.5    
58.6    
58.7    
58.8    
58.9    
59.0    
59.1    
59.2    
59.3    
59.4    
59.5    
59.6    
59.7    
59.9    
60.0    
60.1    
60.2    
60.3    
60.4    
60.5    
60.6    
60.7    
60.8    
60.9    
61.0    
61.1    
61.2    
61.3    
61.4    
61.5    
61.6    
61.7    
61.8    
61.9    
62.0    
62.1    
62.3    
62.4    
62.5    
62.6    
62.7    
62.8    
62.9    
63.0    
63.1    
63.2    
63.3    
63.4    
63.5    
63.6    
63.7    
63.8    
63.9    
64.0    
64.1    
64.2    
64.3    
64.4    
64.5    
64.7    
64.8    
64.9    
65.0    
65.1    
65.2    
65.3    
65.4    
65.5    
65.6    
65.7    
65.8    
65.9    
66.0    
66.1    
66.2    
66.3    
66.4    
66.5    
66.6    
66.7    
66.8    
66.9    
67.0    
67.2    
67.3    
67.4    
67.5    
67.6    
67.7    
67.8    
67.9    
68.0    
68.1    
68.2    
68.3    
68.4    
68.5    
68.6    
68.7    
68.8    
68.9    
69.0    
69.1    
69.2    
69.3    
69.4    
69.6    
69.7    
69.8    
69.9    
70.0    
70.1    
70.2    
70.3    
70.4    
70.5    
70.6    
70.7    
70.8    
70.9    
71.0    
71.1    
71.2    
71.3    
71.4    
71.5    
71.6    
71.7    
71.8    
71.9    
72.1    
72.2    
72.3    
72.4    
72.5    
72.6    
72.7    
72.8    
72.9    
73.0    
73.1    
73.2    
73.3    
73.4    
73.5    
73.6    
73.7    
73.8    
73.9    
74.0    
74.1    
74.2    
74.3    
74.5    
74.6    
74.7    
74.8    
74.9    
75.0    
75.1    
75.2    
75.3    
75.4    
75.5    
75.6    
75.7    
75.8    
75.9    
76.0    
76.1    
76.2    
76.3    
76.4    
76.5    
76.6    
76.7    
76.9    
77.0    
77.1    
77.2    
77.3    
77.4    
77.5    
77.6    
77.7    
77.8    
77.9    
78.0    
78.1    
78.2    
78.3    
78.4    
78.5    
78.6    
78.7    
78.8    
78.9    
79.0    
79.1    
79.2    
79.4    
79.5    
79.6    
79.7    
79.8    
79.9    
80.0    
80.1    
80.2    
80.3    
80.4    
80.5    
80.6    
80.7    
80.8    
80.9    
81.0    
81.1    
81.2    
81.3    
81.4    
81.5    
81.6    
81.8    
81.9    
82.0    
82.1    
82.2    
82.3    
82.4    
82.5    
82.6    
82.7    
82.8    
82.9    
83.0    
83.1    
83.2    
83.3    
83.4    
83.5    
83.6    
83.7    
83.8    
83.9    
84.0    
84.2    
84.3    
84.4    
84.5    
84.6    
84.7    
84.8    
84.9    
85.0    
85.1    
85.2    
85.3    
85.4    
85.5    
85.6    
85.7    
85.8    
85.9    
86.0    
86.1    
86.2    
86.3    
86.4    
86.5    
86.7    
86.8    
86.9    
87.0    
87.1    
87.2    
87.3    
87.4    
87.5    
87.6    
87.7    
87.8    
87.9    
88.0    
88.1    
88.2    
88.3    
88.4    
88.5    
88.6    
88.7    
88.8    
88.9    
89.1    
89.2    
89.3    
89.4    
89.5    
89.6    
89.7    
89.8    
89.9    
90.0    
90.1    
90.2    
90.3    
90.4    
90.5    
90.6    
90.7    
90.8    
90.9    
91.0    
91.1    
91.2    
91.3    
91.4    
91.6    
91.7    
91.8    
91.9    
92.0    
92.1    
92.2    
92.3    
92.4    
92.5    
92.6    
92.7    
92.8    
92.9    
93.0    
93.1    
93.2    
93.3    
93.4    
93.5    
93.6    
93.7    
93.8    
94.0    
94.1    
94.2    
94.3    
94.4    
94.5    
94.6    
94.7    
94.8    
94.9    
95.0    
95.1    
95.2    
95.3    
95.4    
95.5    
95.6    
95.7    
95.8    
95.9    
96.0    
96.1    
96.2    
96.4    
96.5    
96.6    
96.7    
96.8    
96.9    
97.0    
97.1    
97.2    
97.3    
97.4    
97.5    
97.6    
97.7    
97.8    
97.9    
98.0    
98.1    
98.2    
98.3    
98.4    
98.5    
98.6    
98.7    
98.9    
99.0    
99.1    
99.2    
99.3    
99.4    
99.5    
99.6    
99.7    
99.8    
99.9    
-found 27 predictions from path traversal
Error with prediction: snap lend_intergenic: 5367, rend_intergenic: 4064  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 9297, rend_intergenic: 5397  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 17947, rend_intergenic: 14738  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 21511, rend_intergenic: 19223  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 30385, rend_intergenic: 21921  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 57911, rend_intergenic: 36226  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 58529, rend_intergenic: 58271  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 59652, rend_intergenic: 58788  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 60235, rend_intergenic: 59679  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 71820, rend_intergenic: 60245  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 73066, rend_intergenic: 72652  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 81249, rend_intergenic: 73088  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 87989, rend_intergenic: 84761  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 89274, rend_intergenic: 88981  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 106169, rend_intergenic: 89844  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 110332, rend_intergenic: 106270  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 139313, rend_intergenic: 130594  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 156688, rend_intergenic: 153593  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 161155, rend_intergenic: 157455  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 182330, rend_intergenic: 171016  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 192214, rend_intergenic: 188232  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 19 predictions persist after filtering for low support