-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_13/scaffold_13_7102440-7464945

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for HiQ_model.g21846.t1
Valid prediction for snap_scaffold_13-snap.1338-T1
Valid prediction for snap_scaffold_13-snap.1343-T1
Couldn't classify 185305, 185757
Sorry, prediction pasa_asmbl_11022.p1 fails validation.
(ATG)	 AC	185305-185757	AC	AGA
Valid prediction for HiQ_model.g21845.t1
Valid prediction for Augustus_model.g21830.t1
Valid prediction for pasa_asmbl_11027.p1
Valid prediction for Augustus_model.g21822.t1
Valid prediction for CodingQuarry_transcript_13067-T1
Valid prediction for pasa_asmbl_11014.p1
Valid prediction for GlimmerHMM_glimmerT_32589-T1
Valid prediction for snap_scaffold_13-snap.1310-T1
Couldn't classify 347023, 347125
Sorry, prediction pasa_asmbl_11038.p1 fails validation.
(CAG)	 AA	347023-347125	GT	GGG
(GCA)	 AG	348503-348763	GT	AGG
(ACA)	 AG	349270-349451	AG	GAA
-recovered pasa_asmbl_11038.p1, terminal, 349270, 349451
-recovered pasa_asmbl_11038.p1, internal, 348503, 348763
Valid prediction for pasa_asmbl_11025.p1
Valid prediction for snap_scaffold_13-snap.1324-T1
Valid prediction for GeneMark_model.55640_t
Valid prediction for GeneMark_model.55661_t
Valid prediction for snap_scaffold_13-snap.1318-T1
Valid prediction for snap_scaffold_13-snap.1328-T1
Valid prediction for snap_scaffold_13-snap.1326-T1
Valid prediction for snap_scaffold_13-snap.1342-T1
Valid prediction for GeneMark_model.55636_t
Valid prediction for GeneMark_model.55645_t
Valid prediction for GeneMark_model.55651_t
Valid prediction for GeneMark_model.55652_t
Valid prediction for snap_scaffold_13-snap.1317-T1
Valid prediction for GlimmerHMM_glimmerT_32570-T1
Valid prediction for GlimmerHMM_glimmerT_32576-T1
Valid prediction for GeneMark_model.55644_t
Valid prediction for pasa_asmbl_11007.p1
Valid prediction for GeneMark_model.55635_t
Valid prediction for GlimmerHMM_glimmerT_32594-T1
Valid prediction for GlimmerHMM_glimmerT_32593-T1
Valid prediction for HiQ_model.g21841.t1
Valid prediction for snap_scaffold_13-snap.1311-T1
Valid prediction for snap_scaffold_13-snap.1303-T1
Valid prediction for Augustus_model.g21847.t1
Valid prediction for GeneMark_model.55649_t
Valid prediction for snap_scaffold_13-snap.1319-T1
Valid prediction for snap_scaffold_13-snap.1327-T1
Valid prediction for GlimmerHMM_glimmerT_32572-T1
Valid prediction for HiQ_model.g21823.t1
Valid prediction for GlimmerHMM_glimmerT_32575-T1
Couldn't classify 258518, 258669
Sorry, prediction pasa_asmbl_11026.p1 fails validation.
(GAA)	 TG	258518-258669	GT	AGG
(GAA)	 AG	258792-258917	GT	GTG
(GGT)	 AG	259101-259189	GT	CAG
(AAA)	 AG	259265-259475	GT	GGG
(GAT)	 AG	259693-259945	GC	GAG
-recovered pasa_asmbl_11026.p1, terminal, 259693, 259945
-recovered pasa_asmbl_11026.p1, internal, 258792, 258917
-recovered pasa_asmbl_11026.p1, internal, 259101, 259189
-recovered pasa_asmbl_11026.p1, internal, 259265, 259475
-recovered pasa_asmbl_11026.p1, internal, 259693, 259945
Valid prediction for GeneMark_model.55658_t
Valid prediction for GlimmerHMM_glimmerT_32579-T1
Valid prediction for snap_scaffold_13-snap.1340-T1
Valid prediction for GeneMark_model.55633_t
Valid prediction for CodingQuarry_transcript_13080-T1
Valid prediction for snap_scaffold_13-snap.1314-T1
Couldn't classify 176017, 176153
Sorry, prediction pasa_asmbl_11019.p1 fails validation.
(ATG)	 CC	173731-173808	GT	AGG
(GAG)	 AG	173942-174104	GT	TGG
(GCA)	 AG	174225-174345	GT	AAG
(AGG)	 AG	174499-174573	GT	AGG
(AAC)	 AG	174669-174721	GT	GAG
(ATG)	 AG	174818-174963	GT	CAG
(AAC)	 AG	175264-175361	GT	AGG
(GGT)	 AG	175490-175589	GC	AGG
(GTG)	 AG	175709-175835	GT	AGG
(GGG)	 AG	176017-176153	TA	CCT
-recovered pasa_asmbl_11019.p1, initial, 173731, 173808
add_exon() Sorry, pasa_asmbl_11019.p1 174818-174963-initial-1 is invalid.
-recovered pasa_asmbl_11019.p1, initial, 174818, 174963
-recovered pasa_asmbl_11019.p1, internal, 173942, 174104
-recovered pasa_asmbl_11019.p1, internal, 174225, 174345
-recovered pasa_asmbl_11019.p1, internal, 174499, 174573
-recovered pasa_asmbl_11019.p1, internal, 174669, 174721
-recovered pasa_asmbl_11019.p1, internal, 174818, 174963
-recovered pasa_asmbl_11019.p1, internal, 175264, 175361
-recovered pasa_asmbl_11019.p1, internal, 175490, 175589
-recovered pasa_asmbl_11019.p1, internal, 175709, 175835
Valid prediction for GlimmerHMM_glimmerT_32585-T1
Valid prediction for snap_scaffold_13-snap.1339-T1
Couldn't classify 153453, 153462
Sorry, prediction pasa_asmbl_11018.p1 fails validation.
(CAC)	 GC	153453-153462	GT	AGG
(ACT)	 AG	153707-153829	GT	CTG
(ATG)	 AG	154015-154170	GT	TGG
(GCA)	 AG	155317-155541	GT	ATG
(TCT)	 AG	156429-156511	GT	CAG
(GAC)	 AG	156660-156764	GT	AGG
(CTA)	 AG	157338-157488	GT	AGG
(TTA)	 AG	157566-157646	GT	AGG
(ATG)	 AG	157791-157953	GT	GGG
(AGT)	 AG	158061-158166	GT	AGG
(GTG)	 AG	158247-158423	GT	AGG
(GTG)	 AG	158662-158823	GG	AGG
add_exon() Sorry, pasa_asmbl_11018.p1 154015-154170-initial-1 is invalid.
-recovered pasa_asmbl_11018.p1, initial, 154015, 154170
add_exon() Sorry, pasa_asmbl_11018.p1 157791-157953-initial-1 is invalid.
-recovered pasa_asmbl_11018.p1, initial, 157791, 157953
-recovered pasa_asmbl_11018.p1, terminal, 158662, 158823
-recovered pasa_asmbl_11018.p1, internal, 153707, 153829
-recovered pasa_asmbl_11018.p1, internal, 154015, 154170
-recovered pasa_asmbl_11018.p1, internal, 155317, 155541
-recovered pasa_asmbl_11018.p1, internal, 156429, 156511
-recovered pasa_asmbl_11018.p1, internal, 156660, 156764
-recovered pasa_asmbl_11018.p1, internal, 157338, 157488
-recovered pasa_asmbl_11018.p1, internal, 157566, 157646
-recovered pasa_asmbl_11018.p1, internal, 157791, 157953
-recovered pasa_asmbl_11018.p1, internal, 158061, 158166
-recovered pasa_asmbl_11018.p1, internal, 158247, 158423
Valid prediction for GeneMark_model.55642_t
Valid prediction for CodingQuarry_transcript_13076-T1
Valid prediction for GeneMark_model.55631_t
Valid prediction for GlimmerHMM_glimmerT_32582-T1
Valid prediction for HiQ_model.g21831.t1
Valid prediction for Augustus_model.g21833.t1
Valid prediction for pasa_asmbl_11041.p1
Couldn't classify 191064, 191183
Sorry, prediction pasa_asmbl_11024.p1 fails validation.
(ATG)	 AG	189895-190033	GT	GGG
(GTG)	 AG	190279-190351	GT	GAG
(AGA)	 AG	190888-190942	GT	TGG
(ACT)	 AG	191064-191183	GT	AGG
-recovered pasa_asmbl_11024.p1, initial, 189895, 190033
-recovered pasa_asmbl_11024.p1, internal, 189895, 190033
-recovered pasa_asmbl_11024.p1, internal, 190279, 190351
-recovered pasa_asmbl_11024.p1, internal, 190888, 190942
-recovered pasa_asmbl_11024.p1, internal, 191064, 191183
Valid prediction for HiQ_model.g21848.t1
Valid prediction for GlimmerHMM_glimmerT_32588-T1
Valid prediction for GeneMark_model.55655_t
Valid prediction for GlimmerHMM_glimmerT_32597-T1
Valid prediction for snap_scaffold_13-snap.1344-T1
Valid prediction for snap_scaffold_13-snap.1305-T1
Couldn't classify 150276, 151253
Couldn't classify 152206, 152303
Sorry, prediction pasa_asmbl_11017.p1 fails validation.
(GAA)	 GG	150276-151253	GT	AGG
(GTG)	 AG	151868-151967	GT	CGG
(CTC)	 AG	152206-152303	CA	CCC
-recovered pasa_asmbl_11017.p1, internal, 151868, 151967
Valid prediction for GlimmerHMM_glimmerT_32571-T1
Valid prediction for GeneMark_model.55660_t
Valid prediction for Augustus_model.g21834.t1
Valid prediction for Augustus_model.g21825.t1
Valid prediction for Augustus_model.g21849.t1
Valid prediction for CodingQuarry_transcript_13078-T1
Valid prediction for GeneMark_model.55646_t
Valid prediction for snap_scaffold_13-snap.1336-T1
Valid prediction for Augustus_model.g21835.t1
Valid prediction for CodingQuarry_transcript_13074-T1
Valid prediction for GlimmerHMM_glimmerT_32595-T1
Valid prediction for snap_scaffold_13-snap.1307-T1
Valid prediction for Augustus_model.g21838.t1
Valid prediction for Augustus_model.g21827.t1
Valid prediction for CodingQuarry_transcript_13068-T1
Valid prediction for CodingQuarry_transcript_13066-T1
Valid prediction for Augustus_model.g21843.t1
Valid prediction for pasa_asmbl_11031.p1
Valid prediction for GlimmerHMM_glimmerT_32580-T1
Valid prediction for GlimmerHMM_glimmerT_32590-T1
Valid prediction for Augustus_model.g21842.t1
Valid prediction for snap_scaffold_13-snap.1329-T1
Valid prediction for snap_scaffold_13-snap.1341-T1
Valid prediction for GeneMark_model.55632_t
Valid prediction for GlimmerHMM_glimmerT_32581-T1
Valid prediction for HiQ_model.g21824.t1
Valid prediction for GeneMark_model.55648_t
Valid prediction for snap_scaffold_13-snap.1335-T1
Valid prediction for GlimmerHMM_glimmerT_32584-T1
Valid prediction for CodingQuarry_transcript_13071-T1
Valid prediction for Augustus_model.g21839.t1
Valid prediction for snap_scaffold_13-snap.1304-T1
Valid prediction for GlimmerHMM_glimmerT_32596-T1
Valid prediction for GeneMark_model.55625_t
Valid prediction for GeneMark_model.55626_t
Valid prediction for snap_scaffold_13-snap.1322-T1
Valid prediction for snap_scaffold_13-snap.1333-T1
Couldn't classify 331631, 331744
Sorry, prediction pasa_asmbl_11033.p1 fails validation.
(GTG)	 AG	331631-331744	GC	AGG
(AGC)	 AG	332280-332430	GT	AGG
(ATA)	 AG	334009-334158	GT	AGG
(ACT)	 AG	334445-334648	GT	AGG
(GCT)	 AG	334763-334905	GT	ATG
(ATC)	 AG	335224-335371	GT	AGG
(AGT)	 AG	335587-340151	GT	CAG
(ATA)	 AG	340275-340373	GT	GGG
(GAA)	 AG	340485-340661	GT	CAG
(GGA)	 AG	340747-340842	GT	AGG
(ACT)	 AG	340938-341123	CC	GAC
-recovered pasa_asmbl_11033.p1, terminal, 340938, 341123
-recovered pasa_asmbl_11033.p1, internal, 331631, 331744
-recovered pasa_asmbl_11033.p1, internal, 332280, 332430
-recovered pasa_asmbl_11033.p1, internal, 334009, 334158
-recovered pasa_asmbl_11033.p1, internal, 334445, 334648
-recovered pasa_asmbl_11033.p1, internal, 334763, 334905
-recovered pasa_asmbl_11033.p1, internal, 335224, 335371
-recovered pasa_asmbl_11033.p1, internal, 335587, 340151
-recovered pasa_asmbl_11033.p1, internal, 340275, 340373
-recovered pasa_asmbl_11033.p1, internal, 340485, 340661
-recovered pasa_asmbl_11033.p1, internal, 340747, 340842
Valid prediction for snap_scaffold_13-snap.1302-T1
Valid prediction for snap_scaffold_13-snap.1306-T1
Valid prediction for pasa_asmbl_11043.p1
Valid prediction for CodingQuarry_transcript_13079-T1
Valid prediction for GlimmerHMM_glimmerT_32586-T1
Valid prediction for snap_scaffold_13-snap.1332-T1
Valid prediction for snap_scaffold_13-snap.1323-T1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for snap_scaffold_13-snap.1291-T1
Valid prediction for HiQ_model.g21837.t1
Valid prediction for GlimmerHMM_glimmerT_32578-T1
Valid prediction for Augustus_model.g21817.t1
Valid prediction for CodingQuarry_transcript_13062-T1
Valid prediction for HiQ_model.g21844.t1
Valid prediction for Augustus_model.g21816.t1
Valid prediction for GlimmerHMM_glimmerT_32567-T1
Valid prediction for Augustus_model.g21832.t1
Valid prediction for HiQ_model.g21840.t1
Valid prediction for snap_scaffold_13-snap.1331-T1
Valid prediction for GeneMark_model.55638_t
Valid prediction for snap_scaffold_13-snap.1298-T1
Valid prediction for GlimmerHMM_glimmerT_32564-T1
Valid prediction for CodingQuarry_transcript_13063-T1
Valid prediction for snap_scaffold_13-snap.1301-T1
Valid prediction for GlimmerHMM_glimmerT_32563-T1
Valid prediction for GeneMark_model.55639_t
Valid prediction for snap_scaffold_13-snap.1297-T1
Valid prediction for snap_scaffold_13-snap.1294-T1
Valid prediction for pasa_asmbl_9817.p1
Valid prediction for snap_scaffold_13-snap.1321-T1
Valid prediction for GlimmerHMM_glimmerT_32555-T1
Valid prediction for Augustus_model.g21826.t1
Valid prediction for Augustus_model.g21836.t1
Valid prediction for GlimmerHMM_glimmerT_32587-T1
Valid prediction for GlimmerHMM_glimmerT_32565-T1
Valid prediction for GeneMark_model.55630_t
Valid prediction for pasa_asmbl_9840.p1
Valid prediction for GlimmerHMM_glimmerT_32592-T1
Valid prediction for GeneMark_model.55650_t
Valid prediction for snap_scaffold_13-snap.1299-T1
Valid prediction for GeneMark_model.55628_t
Valid prediction for CodingQuarry_transcript_13065-T1
Valid prediction for pasa_asmbl_9829.p1
Valid prediction for snap_scaffold_13-snap.1290-T1
Valid prediction for CodingQuarry_transcript_13073-T1
Couldn't classify 144309, 144463
Sorry, prediction pasa_asmbl_9836.p1 fails validation.
(AAG)	 CA	144309-144463	GT	AAG
(GAC)	 AG	144652-144815	GT	AGG
(ACC)	 AG	145053-145232	GT	GAG
(AAT)	 AG	145329-145476	GC	AGG
(CTG)	 AG	145677-145842	GT	GGG
(GGA)	 AG	145943-146056	TG	AGT
-recovered pasa_asmbl_9836.p1, terminal, 145943, 146056
-recovered pasa_asmbl_9836.p1, internal, 144652, 144815
-recovered pasa_asmbl_9836.p1, internal, 145053, 145232
-recovered pasa_asmbl_9836.p1, internal, 145329, 145476
-recovered pasa_asmbl_9836.p1, internal, 145677, 145842
Valid prediction for snap_scaffold_13-snap.1320-T1
Valid prediction for Augustus_model.g21819.t1
Valid prediction for snap_scaffold_13-snap.1312-T1
Valid prediction for GlimmerHMM_glimmerT_32557-T1
Valid prediction for snap_scaffold_13-snap.1292-T1
Valid prediction for CodingQuarry_transcript_13072-T1
Valid prediction for GlimmerHMM_glimmerT_32562-T1
Valid prediction for GeneMark_model.55654_t
Valid prediction for GeneMark_model.55634_t
Valid prediction for GlimmerHMM_glimmerT_32559-T1
Valid prediction for GeneMark_model.55656_t
Valid prediction for snap_scaffold_13-snap.1289-T1
Valid prediction for pasa_asmbl_9820.p1
Valid prediction for snap_scaffold_13-snap.1295-T1
Valid prediction for snap_scaffold_13-snap.1330-T1
Valid prediction for pasa_asmbl_9834.p1
Valid prediction for GlimmerHMM_glimmerT_32560-T1
Valid prediction for GeneMark_model.55643_t
Valid prediction for pasa_asmbl_9828.p1
Valid prediction for snap_scaffold_13-snap.1325-T1
Couldn't classify 97306, 97424
Sorry, prediction pasa_asmbl_9838.p1 fails validation.
(TAT)	 CA	97306-97424	GT	TGG
(TTT)	 AG	97770-97837	GT	AGG
(CTG)	 AG	97923-98007	GT	ACG
(ACT)	 AG	98108-98125	GT	AAG
(AGC)	 AG	98214-98244	GT	AGG
(GAC)	 AG	98431-98540	GT	AAG
(ACT)	 AG	98652-98718	GT	AAG
(AAT)	 AG	98801-98871	GT	AGG
(GCT)	 AG	98975-99053	GT	AGG
(AAA)	 AG	99181-99260	GT	AGG
(TTT)	 AG	99433-99562	GT	ATG
(TAT)	 AG	99709-99843	CC	AGC
-recovered pasa_asmbl_9838.p1, terminal, 99709, 99843
-recovered pasa_asmbl_9838.p1, internal, 97770, 97837
-recovered pasa_asmbl_9838.p1, internal, 97923, 98007
-recovered pasa_asmbl_9838.p1, internal, 98108, 98125
-recovered pasa_asmbl_9838.p1, internal, 98214, 98244
-recovered pasa_asmbl_9838.p1, internal, 98431, 98540
-recovered pasa_asmbl_9838.p1, internal, 98652, 98718
-recovered pasa_asmbl_9838.p1, internal, 98801, 98871
-recovered pasa_asmbl_9838.p1, internal, 98975, 99053
-recovered pasa_asmbl_9838.p1, internal, 99181, 99260
-recovered pasa_asmbl_9838.p1, internal, 99433, 99562
Valid prediction for GlimmerHMM_glimmerT_32577-T1
Valid prediction for snap_scaffold_13-snap.1334-T1
Valid prediction for GlimmerHMM_glimmerT_32583-T1
Valid prediction for snap_scaffold_13-snap.1315-T1
Valid prediction for snap_scaffold_13-snap.1288-T1
Valid prediction for snap_scaffold_13-snap.1296-T1
Valid prediction for GeneMark_model.55629_t
Valid prediction for snap_scaffold_13-snap.1313-T1
Valid prediction for Augustus_model.g21818.t1
Valid prediction for snap_scaffold_13-snap.1308-T1
Valid prediction for GeneMark_model.55653_t
Valid prediction for GlimmerHMM_glimmerT_32561-T1
Valid prediction for GeneMark_model.55637_t
Valid prediction for HiQ_model.g21821.t1
Valid prediction for HiQ_model.g21829.t1
Valid prediction for GlimmerHMM_glimmerT_32568-T1
Valid prediction for GlimmerHMM_glimmerT_32569-T1
Valid prediction for Augustus_model.g21815.t1
Valid prediction for CodingQuarry_transcript_13064-T1
Valid prediction for GeneMark_model.55641_t
Valid prediction for GlimmerHMM_glimmerT_32591-T1
Valid prediction for snap_scaffold_13-snap.1309-T1
Valid prediction for snap_scaffold_13-snap.1300-T1
Valid prediction for HiQ_model.g21820.t1
Valid prediction for snap_scaffold_13-snap.1293-T1
Valid prediction for GlimmerHMM_glimmerT_32558-T1
Valid prediction for GeneMark_model.55657_t
Valid prediction for pasa_asmbl_9812.p1
Valid prediction for GeneMark_model.55647_t
Valid prediction for GeneMark_model.55659_t
Valid prediction for CodingQuarry_transcript_13075-T1
Valid prediction for CodingQuarry_transcript_13069-T1
Valid prediction for HiQ_model.g21828.t1
Valid prediction for GlimmerHMM_glimmerT_32574-T1
Valid prediction for snap_scaffold_13-snap.1316-T1
Valid prediction for GlimmerHMM_glimmerT_32556-T1
Valid prediction for GeneMark_model.55627_t
Valid prediction for GlimmerHMM_glimmerT_32573-T1
Valid prediction for snap_scaffold_13-snap.1337-T1
Valid prediction for GlimmerHMM_glimmerT_32566-T1
Valid prediction for CodingQuarry_transcript_13070-T1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 283461, rend_intergenic: 280233  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 315265, rend_intergenic: 312329  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 362506
-exon list size: 789


building trellis

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18.0    
18.1    
18.2    
18.3    
18.5    
18.6    
18.7    
18.8    
19.0    
19.1    
19.2    
19.3    
19.5    
19.6    
19.7    
19.8    
20.0    
20.1    
20.2    
20.4    
20.5    
20.6    
20.7    
20.9    
21.0    
21.1    
21.2    
21.4    
21.5    
21.6    
21.7    
21.9    
22.0    
22.1    
22.3    
22.4    
22.5    
22.6    
22.8    
22.9    
23.0    
23.1    
23.3    
23.4    
23.5    
23.6    
23.8    
23.9    
24.0    
24.1    
24.3    
24.4    
24.5    
24.7    
24.8    
24.9    
25.0    
25.2    
25.3    
25.4    
25.5    
25.7    
25.8    
25.9    
26.0    
26.2    
26.3    
26.4    
26.5    
26.7    
26.8    
26.9    
27.1    
27.2    
27.3    
27.4    
27.6    
27.7    
27.8    
27.9    
28.1    
28.2    
28.3    
28.4    
28.6    
28.7    
28.8    
29.0    
29.1    
29.2    
29.3    
29.5    
29.6    
29.7    
29.8    
30.0    
30.1    
30.2    
30.3    
30.5    
30.6    
30.7    
30.8    
31.0    
31.1    
31.2    
31.4    
31.5    
31.6    
31.7    
31.9    
32.0    
32.1    
32.2    
32.4    
32.5    
32.6    
32.7    
32.9    
33.0    
33.1    
33.2    
33.4    
33.5    
33.6    
33.8    
33.9    
34.0    
34.1    
34.3    
34.4    
34.5    
34.6    
34.8    
34.9    
35.0    
35.1    
35.3    
35.4    
35.5    
35.7    
35.8    
35.9    
36.0    
36.2    
36.3    
36.4    
36.5    
36.7    
36.8    
36.9    
37.0    
37.2    
37.3    
37.4    
37.5    
37.7    
37.8    
37.9    
38.1    
38.2    
38.3    
38.4    
38.6    
38.7    
38.8    
38.9    
39.1    
39.2    
39.3    
39.4    
39.6    
39.7    
39.8    
39.9    
40.1    
40.2    
40.3    
40.5    
40.6    
40.7    
40.8    
41.0    
41.1    
41.2    
41.3    
41.5    
41.6    
41.7    
41.8    
42.0    
42.1    
42.2    
42.4    
42.5    
42.6    
42.7    
42.9    
43.0    
43.1    
43.2    
43.4    
43.5    
43.6    
43.7    
43.9    
44.0    
44.1    
44.2    
44.4    
44.5    
44.6    
44.8    
44.9    
45.0    
45.1    
45.3    
45.4    
45.5    
45.6    
45.8    
45.9    
46.0    
46.1    
46.3    
46.4    
46.5    
46.6    
46.8    
46.9    
47.0    
47.2    
47.3    
47.4    
47.5    
47.7    
47.8    
47.9    
48.0    
48.2    
48.3    
48.4    
48.5    
48.7    
48.8    
48.9    
49.1    
49.2    
49.3    
49.4    
49.6    
49.7    
49.8    
49.9    
50.1    
50.2    
50.3    
50.4    
50.6    
50.7    
50.8    
50.9    
51.1    
51.2    
51.3    
51.5    
51.6    
51.7    
51.8    
52.0    
52.1    
52.2    
52.3    
52.5    
52.6    
52.7    
52.8    
53.0    
53.1    
53.2    
53.4    
53.5    
53.6    
53.7    
53.9    
54.0    
54.1    
54.2    
54.4    
54.5    
54.6    
54.7    
54.9    
55.0    
55.1    
55.2    
55.4    
55.5    
55.6    
55.8    
55.9    
56.0    
56.1    
56.3    
56.4    
56.5    
56.6    
56.8    
56.9    
57.0    
57.1    
57.3    
57.4    
57.5    
57.6    
57.8    
57.9    
58.0    
58.2    
58.3    
58.4    
58.5    
58.7    
58.8    
58.9    
59.0    
59.2    
59.3    
59.4    
59.5    
59.7    
59.8    
59.9    
60.1    
60.2    
60.3    
60.4    
60.6    
60.7    
60.8    
60.9    
61.1    
61.2    
61.3    
61.4    
61.6    
61.7    
61.8    
61.9    
62.1    
62.2    
62.3    
62.5    
62.6    
62.7    
62.8    
63.0    
63.1    
63.2    
63.3    
63.5    
63.6    
63.7    
63.8    
64.0    
64.1    
64.2    
64.3    
64.5    
64.6    
64.7    
64.9    
65.0    
65.1    
65.2    
65.4    
65.5    
65.6    
65.7    
65.9    
66.0    
66.1    
66.2    
66.4    
66.5    
66.6    
66.8    
66.9    
67.0    
67.1    
67.3    
67.4    
67.5    
67.6    
67.8    
67.9    
68.0    
68.1    
68.3    
68.4    
68.5    
68.6    
68.8    
68.9    
69.0    
69.2    
69.3    
69.4    
69.5    
69.7    
69.8    
69.9    
70.0    
70.2    
70.3    
70.4    
70.5    
70.7    
70.8    
70.9    
71.0    
71.2    
71.3    
71.4    
71.6    
71.7    
71.8    
71.9    
72.1    
72.2    
72.3    
72.4    
72.6    
72.7    
72.8    
72.9    
73.1    
73.2    
73.3    
73.5    
73.6    
73.7    
73.8    
74.0    
74.1    
74.2    
74.3    
74.5    
74.6    
74.7    
74.8    
75.0    
75.1    
75.2    
75.3    
75.5    
75.6    
75.7    
75.9    
76.0    
76.1    
76.2    
76.4    
76.5    
76.6    
76.7    
76.9    
77.0    
77.1    
77.2    
77.4    
77.5    
77.6    
77.7    
77.9    
78.0    
78.1    
78.3    
78.4    
78.5    
78.6    
78.8    
78.9    
79.0    
79.1    
79.3    
79.4    
79.5    
79.6    
79.8    
79.9    
80.0    
80.2    
80.3    
80.4    
80.5    
80.7    
80.8    
80.9    
81.0    
81.2    
81.3    
81.4    
81.5    
81.7    
81.8    
81.9    
82.0    
82.2    
82.3    
82.4    
82.6    
82.7    
82.8    
82.9    
83.1    
83.2    
83.3    
83.4    
83.6    
83.7    
83.8    
83.9    
84.1    
84.2    
84.3    
84.5    
84.6    
84.7    
84.8    
85.0    
85.1    
85.2    
85.3    
85.5    
85.6    
85.7    
85.8    
86.0    
86.1    
86.2    
86.3    
86.5    
86.6    
86.7    
86.9    
87.0    
87.1    
87.2    
87.4    
87.5    
87.6    
87.7    
87.9    
88.0    
88.1    
88.2    
88.4    
88.5    
88.6    
88.7    
88.9    
89.0    
89.1    
89.3    
89.4    
89.5    
89.6    
89.8    
89.9    
90.0    
90.1    
90.3    
90.4    
90.5    
90.6    
90.8    
90.9    
91.0    
91.2    
91.3    
91.4    
91.5    
91.7    
91.8    
91.9    
92.0    
92.2    
92.3    
92.4    
92.5    
92.7    
92.8    
92.9    
93.0    
93.2    
93.3    
93.4    
93.6    
93.7    
93.8    
93.9    
94.1    
94.2    
94.3    
94.4    
94.6    
94.7    
94.8    
94.9    
95.1    
95.2    
95.3    
95.4    
95.6    
95.7    
95.8    
96.0    
96.1    
96.2    
96.3    
96.5    
96.6    
96.7    
96.8    
97.0    
97.1    
97.2    
97.3    
97.5    
97.6    
97.7    
97.9    
98.0    
98.1    
98.2    
98.4    
98.5    
98.6    
98.7    
98.9    
99.0    
99.1    
99.2    
99.4    
99.5    
99.6    
99.7    
99.9    
-found 41 predictions from path traversal
Error with prediction: snap lend_intergenic: 283461, rend_intergenic: 280233  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 315265, rend_intergenic: 312329  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 37 predictions persist after filtering for low support