-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_13/scaffold_13_4918925-5197282 -reading genomic sequence. ** Processing features (+) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: +) -loading gene prediction evidence. (strand: +)Valid prediction for snap_scaffold_13-snap.967-T1 Valid prediction for Augustus_model.g21635.t1 Valid prediction for snap_scaffold_13-snap.944-T1 Valid prediction for Augustus_model.g21640.t1 Valid prediction for snap_scaffold_13-snap.973-T1 Valid prediction for GeneMark_model.55278_t Valid prediction for GeneMark_model.55330_t Valid prediction for GeneMark_model.55300_t Valid prediction for GeneMark_model.55281_t Valid prediction for GlimmerHMM_glimmerT_32332-T1 Valid prediction for GeneMark_model.55328_t Valid prediction for GlimmerHMM_glimmerT_32329-T1 Valid prediction for GeneMark_model.55287_t Valid prediction for GeneMark_model.55336_t Valid prediction for snap_scaffold_13-snap.935-T1 Valid prediction for GeneMark_model.55291_t Valid prediction for snap_scaffold_13-snap.972-T1 Valid prediction for GlimmerHMM_glimmerT_32315-T1 Valid prediction for GlimmerHMM_glimmerT_32341-T1 Valid prediction for GlimmerHMM_glimmerT_32324-T1 Valid prediction for GeneMark_model.55326_t Valid prediction for GeneMark_model.55334_t Valid prediction for GeneMark_model.55279_t Valid prediction for GeneMark_model.55305_t Valid prediction for snap_scaffold_13-snap.928-T1 Valid prediction for Augustus_model.g21634.t1 Valid prediction for GeneMark_model.55322_t Valid prediction for snap_scaffold_13-snap.980-T1 Valid prediction for GeneMark_model.55344_t Valid prediction for GeneMark_model.55296_t Valid prediction for GeneMark_model.55313_t Valid prediction for GeneMark_model.55339_t Valid prediction for GlimmerHMM_glimmerT_32347-T1 Valid prediction for GlimmerHMM_glimmerT_32337-T1 Valid prediction for GlimmerHMM_glimmerT_32322-T1 Valid prediction for snap_scaffold_13-snap.936-T1 Valid prediction for GeneMark_model.55298_t Valid prediction for Augustus_model.g21644.t1 Valid prediction for snap_scaffold_13-snap.933-T1 Valid prediction for snap_scaffold_13-snap.965-T1 Valid prediction for GeneMark_model.55317_t Valid prediction for GlimmerHMM_glimmerT_32319-T1 Valid prediction for GeneMark_model.55289_t Valid prediction for GeneMark_model.55284_t Valid prediction for GlimmerHMM_glimmerT_32316-T1 Valid prediction for GeneMark_model.55311_t Valid prediction for snap_scaffold_13-snap.948-T1 Valid prediction for GeneMark_model.55333_t Valid prediction for CodingQuarry_transcript_12978-T1 Valid prediction for GlimmerHMM_glimmerT_32346-T1 Valid prediction for GeneMark_model.55332_t Valid prediction for GeneMark_model.55324_t Valid prediction for GeneMark_model.55318_t Valid prediction for snap_scaffold_13-snap.953-T1 Valid prediction for GeneMark_model.55306_t Valid prediction for GeneMark_model.55301_t Valid prediction for snap_scaffold_13-snap.957-T1 Couldn't classify 206717, 207000 Couldn't classify 207154, 207187 Sorry, prediction pasa_asmbl_11567.p1 fails validation. (GAT) CG 206717-207000 GT AGG (AAT) AG 207154-207187 AT GGA Valid prediction for snap_scaffold_13-snap.929-T1 Valid prediction for snap_scaffold_13-snap.951-T1 Valid prediction for snap_scaffold_13-snap.942-T1 Valid prediction for HiQ_model.g21654.t1 Valid prediction for GeneMark_model.55338_t Valid prediction for GeneMark_model.55315_t Valid prediction for snap_scaffold_13-snap.964-T1 Valid prediction for GeneMark_model.55303_t Valid prediction for snap_scaffold_13-snap.970-T1 Valid prediction for snap_scaffold_13-snap.950-T1 Valid prediction for snap_scaffold_13-snap.930-T1 Valid prediction for Augustus_model.g21647.t1 Valid prediction for GeneMark_model.55285_t Valid prediction for Augustus_model.g21641.t1 Valid prediction for GlimmerHMM_glimmerT_32335-T1 Valid prediction for GlimmerHMM_glimmerT_32333-T1 Valid prediction for GlimmerHMM_glimmerT_32321-T1 Valid prediction for snap_scaffold_13-snap.947-T1 Valid prediction for snap_scaffold_13-snap.959-T1 Valid prediction for snap_scaffold_13-snap.938-T1 Valid prediction for GlimmerHMM_glimmerT_32323-T1 Valid prediction for GeneMark_model.55345_t Valid prediction for pasa_asmbl_10806.p1 Valid prediction for GeneMark_model.55309_t Valid prediction for GeneMark_model.55294_t Valid prediction for snap_scaffold_13-snap.932-T1 Valid prediction for snap_scaffold_13-snap.961-T1 Valid prediction for GeneMark_model.55299_t Valid prediction for snap_scaffold_13-snap.943-T1 Valid prediction for GeneMark_model.55283_t Valid prediction for snap_scaffold_13-snap.952-T1 Valid prediction for snap_scaffold_13-snap.937-T1 Valid prediction for GeneMark_model.55293_t Valid prediction for GlimmerHMM_glimmerT_32318-T1 Valid prediction for Augustus_model.g21658.t1 Couldn't classify 206511, 206568 Sorry, prediction pasa_asmbl_11600.p1 fails validation. (ATG) AA 204044-204148 GT GGG (GCA) AG 204272-204350 GT AGG (AAG) AG 204468-204571 GT GGG (GAA) AG 204692-204993 GT AGG (GTT) AG 205291-205371 GT AGG (CGA) AG 205687-205773 GT AAG (GCT) AG 205973-206058 GT CGG (GTG) AG 206188-206284 GT AGG (AGA) AG 206511-206568 GT TGG -recovered pasa_asmbl_11600.p1, initial, 204044, 204148 -recovered pasa_asmbl_11600.p1, internal, 204272, 204350 -recovered pasa_asmbl_11600.p1, internal, 204468, 204571 -recovered pasa_asmbl_11600.p1, internal, 204692, 204993 -recovered pasa_asmbl_11600.p1, internal, 205291, 205371 -recovered pasa_asmbl_11600.p1, internal, 205687, 205773 -recovered pasa_asmbl_11600.p1, internal, 205973, 206058 -recovered pasa_asmbl_11600.p1, internal, 206188, 206284 -recovered pasa_asmbl_11600.p1, internal, 206511, 206568 -loading the search evidence (protein and EST search results, strand: +) -scoring exons (strand: +) ** Processing features (-) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: -) -loading gene prediction evidence. (strand: -)Valid prediction for GeneMark_model.55310_t Valid prediction for snap_scaffold_13-snap.931-T1 Valid prediction for snap_scaffold_13-snap.927-T1 Valid prediction for GlimmerHMM_glimmerT_32334-T1 Valid prediction for snap_scaffold_13-snap.966-T1 Valid prediction for GlimmerHMM_glimmerT_32320-T1 Valid prediction for GlimmerHMM_glimmerT_32344-T1 Valid prediction for Augustus_model.g21651.t1 Couldn't classify 197292, 197337 Sorry, prediction GeneMark_model.55307_t fails validation. (AGG) AG 197292-197337 GT AGG (AGG) AG 197760-197873 GT AAG (AGA) AG 198000-198017 GT GAG (TTT) AG 198054-198059 GT GAG (AGA) AG 198138-198173 GT AGG (AAA) AG 198196-198242 GT AGG (GCA) AG 198757-198914 GT TCG (ACC) AG 199301-199411 GG GAG -recovered GeneMark_model.55307_t, terminal, 198000, 198017 -recovered GeneMark_model.55307_t, terminal, 199301, 199411 -recovered GeneMark_model.55307_t, internal, 197292, 197337 -recovered GeneMark_model.55307_t, internal, 197760, 197873 -recovered GeneMark_model.55307_t, internal, 198000, 198017 -recovered GeneMark_model.55307_t, internal, 198054, 198059 -recovered GeneMark_model.55307_t, internal, 198138, 198173 -recovered GeneMark_model.55307_t, internal, 198196, 198242 -recovered GeneMark_model.55307_t, internal, 198757, 198914 Couldn't classify 2058, 2093 Couldn't classify 5146, 5223 Sorry, prediction pasa_asmbl_9639.p1 fails validation. (TCG) AT 2058-2093 GT CGG (GGA) AG 3465-3560 GT AAG (GCA) AG 3718-3819 GT AGG (ATG) AG 4271-4321 GT CCG (GTG) AG 4526-4687 GT AGG (GGT) AG 5146-5223 GG GAG -recovered pasa_asmbl_9639.p1, initial, 4271, 4321 -recovered pasa_asmbl_9639.p1, internal, 3465, 3560 -recovered pasa_asmbl_9639.p1, internal, 3718, 3819 -recovered pasa_asmbl_9639.p1, internal, 4271, 4321 -recovered pasa_asmbl_9639.p1, internal, 4526, 4687 Valid prediction for GlimmerHMM_glimmerT_32345-T1 Valid prediction for GeneMark_model.55323_t Valid prediction for Augustus_model.g21649.t1 Valid prediction for snap_scaffold_13-snap.983-T1 Valid prediction for GlimmerHMM_glimmerT_32350-T1 Valid prediction for GlimmerHMM_glimmerT_32327-T1 Valid prediction for GeneMark_model.55290_t Valid prediction for Augustus_model.g21637.t1 Valid prediction for snap_scaffold_13-snap.939-T1 Valid prediction for CodingQuarry_transcript_12979-T1 Valid prediction for Augustus_model.g21660.t1 Valid prediction for CodingQuarry_transcript_12980-T1 Valid prediction for snap_scaffold_13-snap.971-T1 Valid prediction for GeneMark_model.55319_t Valid prediction for pasa_asmbl_9637.p1 Valid prediction for GeneMark_model.55340_t Valid prediction for GlimmerHMM_glimmerT_32317-T1 Valid prediction for GeneMark_model.55297_t Valid prediction for snap_scaffold_13-snap.956-T1 Valid prediction for Augustus_model.g21659.t1 Valid prediction for GeneMark_model.55327_t Valid prediction for snap_scaffold_13-snap.963-T1 Valid prediction for snap_scaffold_13-snap.960-T1 Valid prediction for GlimmerHMM_glimmerT_32326-T1 Valid prediction for GlimmerHMM_glimmerT_32331-T1 Valid prediction for Augustus_model.g21648.t1 Valid prediction for GlimmerHMM_glimmerT_32330-T1 Valid prediction for Augustus_model.g21645.t1 Valid prediction for snap_scaffold_13-snap.949-T1 Valid prediction for Augustus_model.g21657.t1 Valid prediction for snap_scaffold_13-snap.934-T1 Valid prediction for GeneMark_model.55335_t Valid prediction for Augustus_model.g21652.t1 Valid prediction for GlimmerHMM_glimmerT_32339-T1 Valid prediction for GeneMark_model.55329_t Valid prediction for GeneMark_model.55292_t Valid prediction for GeneMark_model.55286_t Valid prediction for snap_scaffold_13-snap.954-T1 Couldn't classify 121549, 121769 Couldn't classify 123472, 123595 Sorry, prediction pasa_asmbl_10319.p1 fails validation. (GTG) AG 121549-121769 GT AGG (CTC) AG 122501-122560 GT AGG (GGA) AG 123472-123595 TG GGT add_exon() Sorry, pasa_asmbl_10319.p1 122501-122560-terminal-1 is invalid. -recovered pasa_asmbl_10319.p1, terminal, 122501, 122560 -recovered pasa_asmbl_10319.p1, internal, 121549, 121769 -recovered pasa_asmbl_10319.p1, internal, 122501, 122560 Valid prediction for snap_scaffold_13-snap.978-T1 Couldn't classify 196721, 196867 Sorry, prediction GeneMark_model.55308_t fails validation. (ATG) AG 195740-195786 GT GAG (CAG) AG 196272-196317 GT CTG (GGA) AG 196443-196450 GT GGG (AGC) AG 196721-196867 GT GAG -recovered GeneMark_model.55308_t, initial, 195740, 195786 -recovered GeneMark_model.55308_t, internal, 195740, 195786 -recovered GeneMark_model.55308_t, internal, 196272, 196317 -recovered GeneMark_model.55308_t, internal, 196443, 196450 -recovered GeneMark_model.55308_t, internal, 196721, 196867 Valid prediction for Augustus_model.g21646.t1 Valid prediction for GlimmerHMM_glimmerT_32336-T1 Valid prediction for snap_scaffold_13-snap.945-T1 Valid prediction for snap_scaffold_13-snap.975-T1 Valid prediction for snap_scaffold_13-snap.962-T1 Valid prediction for snap_scaffold_13-snap.974-T1 Valid prediction for GeneMark_model.55341_t Valid prediction for snap_scaffold_13-snap.977-T1 Valid prediction for GeneMark_model.55282_t Valid prediction for Augustus_model.g21643.t1 Valid prediction for GlimmerHMM_glimmerT_32342-T1 Valid prediction for snap_scaffold_13-snap.940-T1 Couldn't classify 111878, 112645 Couldn't classify 112883, 112990 Sorry, prediction pasa_asmbl_9630.p1 fails validation. (GAT) TA 111878-112645 GT GTG (TGT) AG 112883-112990 AA ACA Valid prediction for snap_scaffold_13-snap.981-T1 Valid prediction for GeneMark_model.55280_t Valid prediction for Augustus_model.g21642.t1 Valid prediction for GeneMark_model.55331_t Valid prediction for snap_scaffold_13-snap.986-T1 Valid prediction for snap_scaffold_13-snap.976-T1 Valid prediction for GeneMark_model.55295_t Valid prediction for GeneMark_model.55343_t Valid prediction for Augustus_model.g21653.t1 Valid prediction for snap_scaffold_13-snap.946-T1 Valid prediction for GlimmerHMM_glimmerT_32343-T1 Couldn't classify 209217, 209322 Sorry, prediction pasa_asmbl_9628.p1 fails validation. (CGG) GT 209217-209322 GT CGG (ACG) AG 209585-209715 GT AGG (GTG) AG 210705-210836 GT TGG (GTT) AG 211051-211187 GT AGG (ATA) AG 211336-211511 GT AAG (GTG) AG 212313-212518 TT AAT -recovered pasa_asmbl_9628.p1, terminal, 212313, 212518 -recovered pasa_asmbl_9628.p1, internal, 209585, 209715 -recovered pasa_asmbl_9628.p1, internal, 210705, 210836 -recovered pasa_asmbl_9628.p1, internal, 211051, 211187 -recovered pasa_asmbl_9628.p1, internal, 211336, 211511 Valid prediction for GeneMark_model.55288_t Valid prediction for GlimmerHMM_glimmerT_32349-T1 Valid prediction for GlimmerHMM_glimmerT_32328-T1 Valid prediction for snap_scaffold_13-snap.958-T1 Valid prediction for snap_scaffold_13-snap.968-T1 Valid prediction for GeneMark_model.55316_t Valid prediction for snap_scaffold_13-snap.985-T1 Valid prediction for GeneMark_model.55314_t Valid prediction for GeneMark_model.55302_t Valid prediction for GeneMark_model.55347_t Valid prediction for GeneMark_model.55337_t Valid prediction for GeneMark_model.55304_t Valid prediction for GlimmerHMM_glimmerT_32348-T1 Valid prediction for GeneMark_model.55320_t Valid prediction for GlimmerHMM_glimmerT_32325-T1 Valid prediction for GlimmerHMM_glimmerT_32340-T1 Valid prediction for Augustus_model.g21639.t1 Valid prediction for Augustus_model.g21650.t1 Valid prediction for snap_scaffold_13-snap.982-T1 Valid prediction for Augustus_model.g21636.t1 Valid prediction for GeneMark_model.55312_t Valid prediction for snap_scaffold_13-snap.984-T1 Couldn't classify 30390, 30400 Sorry, prediction pasa_asmbl_9634.p1 fails validation. (ATG) AG 27862-27987 GT CTG (AAT) AG 28786-29006 GT AAG (ATT) AG 29132-29175 GT AGG (GTG) AG 30121-30159 GT AGG (AAC) AG 30390-30400 AC AGA -recovered pasa_asmbl_9634.p1, initial, 27862, 27987 -recovered pasa_asmbl_9634.p1, internal, 27862, 27987 -recovered pasa_asmbl_9634.p1, internal, 28786, 29006 -recovered pasa_asmbl_9634.p1, internal, 29132, 29175 -recovered pasa_asmbl_9634.p1, internal, 30121, 30159 Valid prediction for Augustus_model.g21655.t1 Valid prediction for snap_scaffold_13-snap.955-T1 Valid prediction for GlimmerHMM_glimmerT_32338-T1 Valid prediction for snap_scaffold_13-snap.979-T1 Valid prediction for CodingQuarry_transcript_12977-T1 Valid prediction for GeneMark_model.55325_t Valid prediction for GeneMark_model.55321_t Valid prediction for snap_scaffold_13-snap.941-T1 Valid prediction for pasa_asmbl_9633.p1 Valid prediction for Augustus_model.g21656.t1 Valid prediction for snap_scaffold_13-snap.969-T1 Valid prediction for Augustus_model.g21638.t1 -loading the search evidence (protein and EST search results, strand: -) -scoring exons (strand: -)Error with prediction: snap lend_intergenic: 11840, rend_intergenic: 4231 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 16186, rend_intergenic: 13609 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 24179, rend_intergenic: 16894 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 40203, rend_intergenic: 26983 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 47701, rend_intergenic: 40207 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 59855, rend_intergenic: 56990 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 74034, rend_intergenic: 68812 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 85295, rend_intergenic: 76196 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 108861, rend_intergenic: 94419 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 121297, rend_intergenic: 109274 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 129010, rend_intergenic: 125053 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 142418, rend_intergenic: 135244 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 144757, rend_intergenic: 142458 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 147653, rend_intergenic: 146544 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 151577, rend_intergenic: 148394 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 160387, rend_intergenic: 153923 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 166070, rend_intergenic: 161793 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 170045, rend_intergenic: 168553 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 173090, rend_intergenic: 170795 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -building DP trellis -building trellis in range 1 - 278358 -exon list size: 969 building trellis 0.1 0.2 0.3 0.4 0.5 0.6 0.7 0.8 0.9 1.0 1.1 1.2 1.3 1.4 1.5 1.6 1.8 1.9 2.0 2.1 2.2 2.3 2.4 2.5 2.6 2.7 2.8 2.9 3.0 3.1 3.2 3.3 3.4 3.5 3.6 3.7 3.8 3.9 4.0 4.1 4.2 4.3 4.4 4.5 4.6 4.7 4.8 4.9 5.0 5.1 5.3 5.4 5.5 5.6 5.7 5.8 5.9 6.0 6.1 6.2 6.3 6.4 6.5 6.6 6.7 6.8 6.9 7.0 7.1 7.2 7.3 7.4 7.5 7.6 7.7 7.8 7.9 8.0 8.1 8.2 8.3 8.4 8.5 8.7 8.8 8.9 9.0 9.1 9.2 9.3 9.4 9.5 9.6 9.7 9.8 9.9 10.0 10.1 10.2 10.3 10.4 10.5 10.6 10.7 10.8 10.9 11.0 11.1 11.2 11.3 11.4 11.5 11.6 11.7 11.8 11.9 12.0 12.2 12.3 12.4 12.5 12.6 12.7 12.8 12.9 13.0 13.1 13.2 13.3 13.4 13.5 13.6 13.7 13.8 13.9 14.0 14.1 14.2 14.3 14.4 14.5 14.6 14.7 14.8 14.9 15.0 15.1 15.2 15.3 15.4 15.6 15.7 15.8 15.9 16.0 16.1 16.2 16.3 16.4 16.5 16.6 16.7 16.8 16.9 17.0 17.1 17.2 17.3 17.4 17.5 17.6 17.7 17.8 17.9 18.0 18.1 18.2 18.3 18.4 18.5 18.6 18.7 18.8 18.9 19.1 19.2 19.3 19.4 19.5 19.6 19.7 19.8 19.9 20.0 20.1 20.2 20.3 20.4 20.5 20.6 20.7 20.8 20.9 21.0 21.1 21.2 21.3 21.4 21.5 21.6 21.7 21.8 21.9 22.0 22.1 22.2 22.3 22.5 22.6 22.7 22.8 22.9 23.0 23.1 23.2 23.3 23.4 23.5 23.6 23.7 23.8 23.9 24.0 24.1 24.2 24.3 24.4 24.5 24.6 24.7 24.8 24.9 25.0 25.1 25.2 25.3 25.4 25.5 25.6 25.7 25.8 26.0 26.1 26.2 26.3 26.4 26.5 26.6 26.7 26.8 26.9 27.0 27.1 27.2 27.3 27.4 27.5 27.6 27.7 27.8 27.9 28.0 28.1 28.2 28.3 28.4 28.5 28.6 28.7 28.8 28.9 29.0 29.1 29.2 29.4 29.5 29.6 29.7 29.8 29.9 30.0 30.1 30.2 30.3 30.4 30.5 30.6 30.7 30.8 30.9 31.0 31.1 31.2 31.3 31.4 31.5 31.6 31.7 31.8 31.9 32.0 32.1 32.2 32.3 32.4 32.5 32.6 32.7 32.9 33.0 33.1 33.2 33.3 33.4 33.5 33.6 33.7 33.8 33.9 34.0 34.1 34.2 34.3 34.4 34.5 34.6 34.7 34.8 34.9 35.0 35.1 35.2 35.3 35.4 35.5 35.6 35.7 35.8 35.9 36.0 36.1 36.3 36.4 36.5 36.6 36.7 36.8 36.9 37.0 37.1 37.2 37.3 37.4 37.5 37.6 37.7 37.8 37.9 38.0 38.1 38.2 38.3 38.4 38.5 38.6 38.7 38.8 38.9 39.0 39.1 39.2 39.3 39.4 39.5 39.6 39.8 39.9 40.0 40.1 40.2 40.3 40.4 40.5 40.6 40.7 40.8 40.9 41.0 41.1 41.2 41.3 41.4 41.5 41.6 41.7 41.8 41.9 42.0 42.1 42.2 42.3 42.4 42.5 42.6 42.7 42.8 42.9 43.0 43.2 43.3 43.4 43.5 43.6 43.7 43.8 43.9 44.0 44.1 44.2 44.3 44.4 44.5 44.6 44.7 44.8 44.9 45.0 45.1 45.2 45.3 45.4 45.5 45.6 45.7 45.8 45.9 46.0 46.1 46.2 46.3 46.4 46.5 46.7 46.8 46.9 47.0 47.1 47.2 47.3 47.4 47.5 47.6 47.7 47.8 47.9 48.0 48.1 48.2 48.3 48.4 48.5 48.6 48.7 48.8 48.9 49.0 49.1 49.2 49.3 49.4 49.5 49.6 49.7 49.8 49.9 50.1 50.2 50.3 50.4 50.5 50.6 50.7 50.8 50.9 51.0 51.1 51.2 51.3 51.4 51.5 51.6 51.7 51.8 51.9 52.0 52.1 52.2 52.3 52.4 52.5 52.6 52.7 52.8 52.9 53.0 53.1 53.2 53.3 53.5 53.6 53.7 53.8 53.9 54.0 54.1 54.2 54.3 54.4 54.5 54.6 54.7 54.8 54.9 55.0 55.1 55.2 55.3 55.4 55.5 55.6 55.7 55.8 55.9 56.0 56.1 56.2 56.3 56.4 56.5 56.6 56.7 56.8 57.0 57.1 57.2 57.3 57.4 57.5 57.6 57.7 57.8 57.9 58.0 58.1 58.2 58.3 58.4 58.5 58.6 58.7 58.8 58.9 59.0 59.1 59.2 59.3 59.4 59.5 59.6 59.7 59.8 59.9 60.0 60.1 60.2 60.4 60.5 60.6 60.7 60.8 60.9 61.0 61.1 61.2 61.3 61.4 61.5 61.6 61.7 61.8 61.9 62.0 62.1 62.2 62.3 62.4 62.5 62.6 62.7 62.8 62.9 63.0 63.1 63.2 63.3 63.4 63.5 63.6 63.7 63.9 64.0 64.1 64.2 64.3 64.4 64.5 64.6 64.7 64.8 64.9 65.0 65.1 65.2 65.3 65.4 65.5 65.6 65.7 65.8 65.9 66.0 66.1 66.2 66.3 66.4 66.5 66.6 66.7 66.8 66.9 67.0 67.1 67.3 67.4 67.5 67.6 67.7 67.8 67.9 68.0 68.1 68.2 68.3 68.4 68.5 68.6 68.7 68.8 68.9 69.0 69.1 69.2 69.3 69.4 69.5 69.6 69.7 69.8 69.9 70.0 70.1 70.2 70.3 70.4 70.5 70.6 70.8 70.9 71.0 71.1 71.2 71.3 71.4 71.5 71.6 71.7 71.8 71.9 72.0 72.1 72.2 72.3 72.4 72.5 72.6 72.7 72.8 72.9 73.0 73.1 73.2 73.3 73.4 73.5 73.6 73.7 73.8 73.9 74.0 74.2 74.3 74.4 74.5 74.6 74.7 74.8 74.9 75.0 75.1 75.2 75.3 75.4 75.5 75.6 75.7 75.8 75.9 76.0 76.1 76.2 76.3 76.4 76.5 76.6 76.7 76.8 76.9 77.0 77.1 77.2 77.3 77.4 77.5 77.7 77.8 77.9 78.0 78.1 78.2 78.3 78.4 78.5 78.6 78.7 78.8 78.9 79.0 79.1 79.2 79.3 79.4 79.5 79.6 79.7 79.8 79.9 80.0 80.1 80.2 80.3 80.4 80.5 80.6 80.7 80.8 80.9 81.1 81.2 81.3 81.4 81.5 81.6 81.7 81.8 81.9 82.0 82.1 82.2 82.3 82.4 82.5 82.6 82.7 82.8 82.9 83.0 83.1 83.2 83.3 83.4 83.5 83.6 83.7 83.8 83.9 84.0 84.1 84.2 84.3 84.4 84.6 84.7 84.8 84.9 85.0 85.1 85.2 85.3 85.4 85.5 85.6 85.7 85.8 85.9 86.0 86.1 86.2 86.3 86.4 86.5 86.6 86.7 86.8 86.9 87.0 87.1 87.2 87.3 87.4 87.5 87.6 87.7 87.8 88.0 88.1 88.2 88.3 88.4 88.5 88.6 88.7 88.8 88.9 89.0 89.1 89.2 89.3 89.4 89.5 89.6 89.7 89.8 89.9 90.0 90.1 90.2 90.3 90.4 90.5 90.6 90.7 90.8 90.9 91.0 91.1 91.2 91.3 91.5 91.6 91.7 91.8 91.9 92.0 92.1 92.2 92.3 92.4 92.5 92.6 92.7 92.8 92.9 93.0 93.1 93.2 93.3 93.4 93.5 93.6 93.7 93.8 93.9 94.0 94.1 94.2 94.3 94.4 94.5 94.6 94.7 94.9 95.0 95.1 95.2 95.3 95.4 95.5 95.6 95.7 95.8 95.9 96.0 96.1 96.2 96.3 96.4 96.5 96.6 96.7 96.8 96.9 97.0 97.1 97.2 97.3 97.4 97.5 97.6 97.7 97.8 97.9 98.0 98.1 98.2 98.4 98.5 98.6 98.7 98.8 98.9 99.0 99.1 99.2 99.3 99.4 99.5 99.6 99.7 99.8 99.9 -found 57 predictions from path traversal Error with prediction: snap lend_intergenic: 11840, rend_intergenic: 4231 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 16186, rend_intergenic: 13609 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 24179, rend_intergenic: 16894 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 40203, rend_intergenic: 26983 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 47701, rend_intergenic: 40207 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 59855, rend_intergenic: 56990 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 74034, rend_intergenic: 68812 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 85295, rend_intergenic: 76196 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 108861, rend_intergenic: 94419 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 121297, rend_intergenic: 109274 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 129010, rend_intergenic: 125053 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 142418, rend_intergenic: 135244 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 144757, rend_intergenic: 142458 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 147653, rend_intergenic: 146544 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 151577, rend_intergenic: 148394 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 160387, rend_intergenic: 153923 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 166070, rend_intergenic: 161793 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 170045, rend_intergenic: 168553 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 173090, rend_intergenic: 170795 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. GOT 5prime partial gene. -reporting highest scoring path thru the trellis. -found 28 predictions persist after filtering for low support