-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_13/scaffold_13_2910764-3117264 -reading genomic sequence. ** Processing features (+) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: +) -loading gene prediction evidence. (strand: +)Valid prediction for snap_scaffold_13-snap.571-T1 Valid prediction for CodingQuarry_transcript_12879-T1 Valid prediction for GlimmerHMM_glimmerT_32006-T1 Couldn't classify 63001, 63501 Sorry, prediction pasa_asmbl_10630.p1 fails validation. (CCC) CG 63001-63501 TG GAT Valid prediction for CodingQuarry_transcript_12880-T1 Valid prediction for snap_scaffold_13-snap.534-T1 Valid prediction for snap_scaffold_13-snap.569-T1 Valid prediction for pasa_asmbl_10637.p1 Valid prediction for GeneMark_model.54909_t Valid prediction for GlimmerHMM_glimmerT_31995-T1 Valid prediction for snap_scaffold_13-snap.564-T1 Valid prediction for HiQ_model.g21372.t1 Valid prediction for GlimmerHMM_glimmerT_31982-T1 Couldn't classify 184118, 184211 Sorry, prediction pasa_asmbl_11649.p1 fails validation. (AAA) AC 184118-184211 GT AGG (GCA) AG 185382-185545 GT GGG (ATG) AG 185765-185890 CA GAC -recovered pasa_asmbl_11649.p1, terminal, 185765, 185890 -recovered pasa_asmbl_11649.p1, internal, 185382, 185545 Valid prediction for snap_scaffold_13-snap.562-T1 Valid prediction for snap_scaffold_13-snap.533-T1 Valid prediction for snap_scaffold_13-snap.558-T1 Valid prediction for CodingQuarry_transcript_12873-T1 Couldn't classify 107385, 107547 Sorry, prediction pasa_asmbl_10635.p1 fails validation. (TTT) TG 107385-107547 GT GGG (CAT) AG 107661-108239 GT TGG (AGA) AG 108347-108472 GT AAG (CAT) AG 108586-108688 GT AGG (GTT) AG 109078-109273 GC AAG -recovered pasa_asmbl_10635.p1, terminal, 109078, 109273 -recovered pasa_asmbl_10635.p1, internal, 107661, 108239 -recovered pasa_asmbl_10635.p1, internal, 108347, 108472 -recovered pasa_asmbl_10635.p1, internal, 108586, 108688 -recovered pasa_asmbl_10635.p1, internal, 109078, 109273 Valid prediction for snap_scaffold_13-snap.546-T1 Valid prediction for GlimmerHMM_glimmerT_32014-T1 Valid prediction for HiQ_model.g21397.t1 Valid prediction for CodingQuarry_transcript_12866-T1 Valid prediction for GlimmerHMM_glimmerT_32004-T1 Valid prediction for GlimmerHMM_glimmerT_31985-T1 Valid prediction for GeneMark_model.54882_t Valid prediction for GlimmerHMM_glimmerT_32020-T1 Valid prediction for GlimmerHMM_glimmerT_31990-T1 Valid prediction for Augustus_model.g21390.t1 Valid prediction for CodingQuarry_transcript_12883-T1 Valid prediction for CodingQuarry_transcript_12872-T1 Valid prediction for GeneMark_model.54902_t Valid prediction for pasa_asmbl_10642.p1 Valid prediction for snap_scaffold_13-snap.551-T1 Valid prediction for GeneMark_model.54898_t Valid prediction for snap_scaffold_13-snap.565-T1 Valid prediction for snap_scaffold_13-snap.548-T1 Valid prediction for GeneMark_model.54893_t Couldn't classify 84703, 84825 Sorry, prediction pasa_asmbl_10632.p1 fails validation. (TTT) GG 84703-84825 GT AGG (AAC) AG 84904-84945 GT TGG (AGA) AG 85108-85181 GT CAG (ATG) AG 85265-85349 GT AGG (CCG) AG 85460-85569 GT AGG (GGT) AG 85739-85802 GT AGG (ACA) AG 85881-86016 GT AGG (GAC) AG 86175-86257 GT AGG (GTT) AG 86383-86472 GA GAG add_exon() Sorry, pasa_asmbl_10632.p1 85265-85349-initial-1 is invalid. -recovered pasa_asmbl_10632.p1, initial, 85265, 85349 -recovered pasa_asmbl_10632.p1, terminal, 86383, 86472 -recovered pasa_asmbl_10632.p1, internal, 84904, 84945 -recovered pasa_asmbl_10632.p1, internal, 85108, 85181 -recovered pasa_asmbl_10632.p1, internal, 85265, 85349 -recovered pasa_asmbl_10632.p1, internal, 85460, 85569 -recovered pasa_asmbl_10632.p1, internal, 85739, 85802 -recovered pasa_asmbl_10632.p1, internal, 85881, 86016 -recovered pasa_asmbl_10632.p1, internal, 86175, 86257 Valid prediction for CodingQuarry_transcript_12885-T1 Valid prediction for Augustus_model.g21400.t1 Valid prediction for GlimmerHMM_glimmerT_31996-T1 Valid prediction for GlimmerHMM_glimmerT_31997-T1 Valid prediction for GlimmerHMM_glimmerT_32002-T1 Valid prediction for snap_scaffold_13-snap.563-T1 Valid prediction for snap_scaffold_13-snap.552-T1 Valid prediction for GeneMark_model.54904_t Valid prediction for snap_scaffold_13-snap.545-T1 Valid prediction for GlimmerHMM_glimmerT_31977-T1 Valid prediction for GlimmerHMM_glimmerT_32010-T1 Valid prediction for GeneMark_model.54911_t Couldn't classify 62181, 62288 Sorry, prediction pasa_asmbl_10629.p1 fails validation. (ATG) TA 59143-59196 GT AGG (GCT) AG 61638-61772 GT TTG (TGC) AG 62181-62288 GT AGG -recovered pasa_asmbl_10629.p1, initial, 59143, 59196 -recovered pasa_asmbl_10629.p1, internal, 61638, 61772 -recovered pasa_asmbl_10629.p1, internal, 62181, 62288 Valid prediction for GeneMark_model.54913_t Valid prediction for Augustus_model.g21381.t1 Valid prediction for CodingQuarry_transcript_12881-T1 Valid prediction for Augustus_model.g21402.t1 Valid prediction for snap_scaffold_13-snap.537-T1 Valid prediction for CodingQuarry_transcript_12882-T1 Valid prediction for Augustus_model.g21382.t1 Valid prediction for GeneMark_model.54897_t Valid prediction for GeneMark_model.54886_t Valid prediction for GeneMark_model.54883_t Valid prediction for CodingQuarry_transcript_12874-T1 Valid prediction for HiQ_model.g21393.t1 Valid prediction for pasa_asmbl_10627.p1 Valid prediction for GlimmerHMM_glimmerT_31978-T1 Valid prediction for GlimmerHMM_glimmerT_31993-T1 Valid prediction for GlimmerHMM_glimmerT_31991-T1 Valid prediction for HiQ_model.g21388.t1 Valid prediction for Augustus_model.g21386.t1 Valid prediction for GlimmerHMM_glimmerT_31980-T1 Valid prediction for Augustus_model.g21384.t1 Valid prediction for GlimmerHMM_glimmerT_32016-T1 -loading the search evidence (protein and EST search results, strand: +) -scoring exons (strand: +) ** Processing features (-) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: -) -loading gene prediction evidence. (strand: -)Valid prediction for pasa_asmbl_9475.p1 Valid prediction for GeneMark_model.54905_t Valid prediction for GlimmerHMM_glimmerT_31986-T1 Couldn't classify 179900, 180007 Couldn't classify 180922, 181056 Sorry, prediction pasa_asmbl_9450.p1 fails validation. (GAC) TA 179900-180007 GT TGG (ACC) AG 180168-180411 GT AGG (GCC) AG 180705-180784 GT AGG (GTG) AG 180922-181056 GA GAG -recovered pasa_asmbl_9450.p1, internal, 180168, 180411 -recovered pasa_asmbl_9450.p1, internal, 180705, 180784 Valid prediction for snap_scaffold_13-snap.543-T1 Valid prediction for GlimmerHMM_glimmerT_31987-T1 Valid prediction for GeneMark_model.54892_t Valid prediction for GlimmerHMM_glimmerT_31998-T1 Valid prediction for GeneMark_model.54910_t Valid prediction for Augustus_model.g21380.t1 Valid prediction for GlimmerHMM_glimmerT_32012-T1 Valid prediction for snap_scaffold_13-snap.574-T1 Valid prediction for GlimmerHMM_glimmerT_32003-T1 Valid prediction for Augustus_model.g21379.t1 Valid prediction for GeneMark_model.54888_t Valid prediction for HiQ_model.g21404.t1 Valid prediction for Augustus_model.g21378.t1 Valid prediction for snap_scaffold_13-snap.539-T1 Valid prediction for GlimmerHMM_glimmerT_32017-T1 Valid prediction for GeneMark_model.54900_t Valid prediction for GeneMark_model.54884_t Valid prediction for GlimmerHMM_glimmerT_32001-T1 Valid prediction for GeneMark_model.54891_t Valid prediction for GlimmerHMM_glimmerT_31984-T1 Valid prediction for GlimmerHMM_glimmerT_32000-T1 Valid prediction for GlimmerHMM_glimmerT_32009-T1 Valid prediction for GlimmerHMM_glimmerT_32013-T1 Valid prediction for CodingQuarry_transcript_12884-T1 Valid prediction for snap_scaffold_13-snap.557-T1 Valid prediction for GeneMark_model.54914_t Valid prediction for CodingQuarry_transcript_12868-T1 Valid prediction for GlimmerHMM_glimmerT_31979-T1 Couldn't classify 182508, 182666 Sorry, prediction pasa_asmbl_9449.p1 fails validation. (CAG) TC 182508-182666 GT AGG (GAA) AG 182787-182899 GT AGG (AAT) AG 183109-183199 CC AAC -recovered pasa_asmbl_9449.p1, terminal, 183109, 183199 -recovered pasa_asmbl_9449.p1, internal, 182787, 182899 Couldn't classify 89150, 89151 Sorry, prediction CodingQuarry_transcript_12876-T1 fails validation. (ATG) GA 89150-89151 GT ATG (GCG) AG 89303-90713 CA AGC -recovered CodingQuarry_transcript_12876-T1, terminal, 89303, 90713 Valid prediction for GeneMark_model.54885_t Valid prediction for CodingQuarry_transcript_12870-T1 Valid prediction for GeneMark_model.54895_t Valid prediction for GeneMark_model.54901_t Couldn't classify 86691, 86691 Sorry, prediction pasa_asmbl_9467.p1 fails validation. (AGT) AA 86691-86691 GT AAG (TGA) AG 88162-90713 CA AGC -recovered pasa_asmbl_9467.p1, terminal, 88162, 90713 Valid prediction for Augustus_model.g21401.t1 Valid prediction for GlimmerHMM_glimmerT_31994-T1 Valid prediction for snap_scaffold_13-snap.555-T1 Valid prediction for GlimmerHMM_glimmerT_32005-T1 Valid prediction for snap_scaffold_13-snap.538-T1 Valid prediction for Augustus_model.g21374.t1 Valid prediction for snap_scaffold_13-snap.560-T1 Couldn't classify 117133, 117263 Couldn't classify 117989, 118096 Sorry, prediction pasa_asmbl_9463.p1 fails validation. (TCG) GC 117133-117263 GT ACG (GTT) AG 117355-117631 GT AGG (GAG) AG 117801-117902 GT AGG (CTG) AG 117989-118096 AC GGA -recovered pasa_asmbl_9463.p1, internal, 117355, 117631 -recovered pasa_asmbl_9463.p1, internal, 117801, 117902 Valid prediction for snap_scaffold_13-snap.573-T1 Valid prediction for Augustus_model.g21389.t1 Valid prediction for pasa_asmbl_9457.p1 Valid prediction for snap_scaffold_13-snap.550-T1 Valid prediction for GlimmerHMM_glimmerT_31989-T1 Couldn't classify 60100, 60342 Sorry, prediction pasa_asmbl_9470.p1 fails validation. (GAG) CA 60100-60342 GT AGG (GTG) AG 60567-60652 GT AAG (ATT) AG 61002-61140 GT AGG (ACG) AG 61359-61456 GT TGG (GAA) AG 61820-61977 GT AGG (GTA) AG 62224-62450 GG GAG -recovered pasa_asmbl_9470.p1, terminal, 60567, 60652 -recovered pasa_asmbl_9470.p1, terminal, 62224, 62450 -recovered pasa_asmbl_9470.p1, internal, 60567, 60652 -recovered pasa_asmbl_9470.p1, internal, 61002, 61140 -recovered pasa_asmbl_9470.p1, internal, 61359, 61456 -recovered pasa_asmbl_9470.p1, internal, 61820, 61977 Valid prediction for GeneMark_model.54915_t Valid prediction for GeneMark_model.54894_t Valid prediction for CodingQuarry_transcript_12888-T1 Valid prediction for GlimmerHMM_glimmerT_32011-T1 Valid prediction for snap_scaffold_13-snap.572-T1 Valid prediction for CodingQuarry_transcript_12886-T1 Valid prediction for Augustus_model.g21398.t1 Valid prediction for Augustus_model.g21395.t1 Valid prediction for GeneMark_model.54903_t Valid prediction for CodingQuarry_transcript_12877-T1 Valid prediction for snap_scaffold_13-snap.549-T1 Couldn't classify 118352, 118409 Couldn't classify 118787, 119076 Sorry, prediction pasa_asmbl_9462.p2 fails validation. (GGG) CT 118352-118409 GT AGG (CCA) AG 118485-118634 GT CGG (GTA) AG 118787-119076 AC TCA -recovered pasa_asmbl_9462.p2, internal, 118485, 118634 Valid prediction for CodingQuarry_transcript_12867-T1 Valid prediction for snap_scaffold_13-snap.535-T1 Valid prediction for snap_scaffold_13-snap.567-T1 Valid prediction for Augustus_model.g21391.t1 Valid prediction for snap_scaffold_13-snap.553-T1 Valid prediction for Augustus_model.g21375.t1 Valid prediction for snap_scaffold_13-snap.570-T1 Valid prediction for GeneMark_model.54889_t Valid prediction for Augustus_model.g21396.t1 Valid prediction for snap_scaffold_13-snap.536-T1 Valid prediction for snap_scaffold_13-snap.544-T1 Valid prediction for GlimmerHMM_glimmerT_32018-T1 Valid prediction for pasa_asmbl_9469.p1 Valid prediction for snap_scaffold_13-snap.559-T1 Valid prediction for pasa_asmbl_9476.p1 Valid prediction for CodingQuarry_transcript_12887-T1 Valid prediction for GlimmerHMM_glimmerT_31981-T1 Valid prediction for HiQ_model.g21383.t1 Valid prediction for HiQ_model.g21387.t1 Valid prediction for Augustus_model.g21376.t1 Couldn't classify 124744, 124801 Sorry, prediction pasa_asmbl_9460.p1 fails validation. (AAC) AA 124744-124801 GT GGG (GTG) AG 125040-125082 GT AGG (GAG) AG 125214-125328 GT GTG (TCC) AG 126517-126615 GT ATG (GTT) AG 126756-126821 GT AGG (TGC) AG 126911-126999 GT AGG (TCT) AG 127128-127163 GT AGG (TGG) AG 127273-128341 GT CGG (GAC) AG 128580-128674 GT AGG (TCT) AG 128822-128902 GT AGG (ATT) AG 129012-129080 GT GGG (GCT) AG 130682-130826 CC AAC -recovered pasa_asmbl_9460.p1, terminal, 127128, 127163 -recovered pasa_asmbl_9460.p1, terminal, 130682, 130826 -recovered pasa_asmbl_9460.p1, internal, 125040, 125082 -recovered pasa_asmbl_9460.p1, internal, 125214, 125328 -recovered pasa_asmbl_9460.p1, internal, 126517, 126615 -recovered pasa_asmbl_9460.p1, internal, 126756, 126821 -recovered pasa_asmbl_9460.p1, internal, 126911, 126999 -recovered pasa_asmbl_9460.p1, internal, 127128, 127163 -recovered pasa_asmbl_9460.p1, internal, 127273, 128341 -recovered pasa_asmbl_9460.p1, internal, 128580, 128674 -recovered pasa_asmbl_9460.p1, internal, 128822, 128902 -recovered pasa_asmbl_9460.p1, internal, 129012, 129080 Valid prediction for GeneMark_model.54896_t Valid prediction for GeneMark_model.54912_t Valid prediction for snap_scaffold_13-snap.556-T1 Valid prediction for GlimmerHMM_glimmerT_32015-T1 Valid prediction for HiQ_model.g21373.t1 Valid prediction for HiQ_model.g21403.t1 Valid prediction for GlimmerHMM_glimmerT_31999-T1 Valid prediction for Augustus_model.g21385.t1 Valid prediction for Augustus_model.g21392.t1 Valid prediction for GlimmerHMM_glimmerT_31983-T1 Valid prediction for CodingQuarry_transcript_12871-T1 Valid prediction for GlimmerHMM_glimmerT_32007-T1 Valid prediction for Augustus_model.g21399.t1 Valid prediction for GeneMark_model.54899_t Valid prediction for snap_scaffold_13-snap.568-T1 Valid prediction for snap_scaffold_13-snap.541-T1 Valid prediction for HiQ_model.g21394.t1 Valid prediction for snap_scaffold_13-snap.540-T1 Couldn't classify 164538, 164546 Sorry, prediction pasa_asmbl_9454.p1 fails validation. (CTC) AG 164538-164546 GT AGG (CAA) AG 164631-164804 GT AGG (AAA) AG 164926-165043 GT CCG (GCA) AG 165301-165460 GT AGG (CTC) AG 165708-165855 AG AAA -recovered pasa_asmbl_9454.p1, terminal, 165708, 165855 -recovered pasa_asmbl_9454.p1, internal, 164538, 164546 -recovered pasa_asmbl_9454.p1, internal, 164631, 164804 -recovered pasa_asmbl_9454.p1, internal, 164926, 165043 -recovered pasa_asmbl_9454.p1, internal, 165301, 165460 Couldn't classify 162452, 162460 Couldn't classify 164127, 164207 Sorry, prediction pasa_asmbl_9455.p1 fails validation. (ATA) AC 162452-162460 GT AGG (GAG) AG 162678-162887 GT AGG (GAT) AG 163059-163169 GT AGG (GTT) AG 163281-163416 GT AAG (CCA) AG 163524-163599 GT AGG (ACA) AG 163863-164040 GT AGG (GTC) AG 164127-164207 CA AGC add_exon() Sorry, pasa_asmbl_9455.p1 163281-163416-terminal-3 is invalid. -recovered pasa_asmbl_9455.p1, terminal, 163281, 163416 -recovered pasa_asmbl_9455.p1, internal, 162678, 162887 -recovered pasa_asmbl_9455.p1, internal, 163059, 163169 -recovered pasa_asmbl_9455.p1, internal, 163281, 163416 -recovered pasa_asmbl_9455.p1, internal, 163524, 163599 -recovered pasa_asmbl_9455.p1, internal, 163863, 164040 Valid prediction for snap_scaffold_13-snap.542-T1 Valid prediction for GeneMark_model.54907_t Valid prediction for GeneMark_model.54887_t Valid prediction for CodingQuarry_transcript_12869-T1 Couldn't classify 86691, 86691 Sorry, prediction CodingQuarry_transcript_12875-T1 fails validation. (AGT) AA 86691-86691 GT AAG (TGA) AG 88162-90713 CA AGC -recovered CodingQuarry_transcript_12875-T1, terminal, 88162, 90713 Couldn't classify 95200, 95256 Sorry, prediction pasa_asmbl_9466.p1 fails validation. (ATG) GA 93213-93292 GT AGG (AAC) AG 93640-93732 GT AGG (GGA) AG 93902-94217 GT AGG (AGA) AG 94496-94562 GT AGG (GTG) AG 94745-94817 GT AGG (CAG) AG 94969-95116 GT AGG (GAG) AG 95200-95256 GA TGG -recovered pasa_asmbl_9466.p1, initial, 93213, 93292 -recovered pasa_asmbl_9466.p1, internal, 93640, 93732 -recovered pasa_asmbl_9466.p1, internal, 93902, 94217 -recovered pasa_asmbl_9466.p1, internal, 94496, 94562 -recovered pasa_asmbl_9466.p1, internal, 94745, 94817 -recovered pasa_asmbl_9466.p1, internal, 94969, 95116 Valid prediction for GeneMark_model.54908_t Valid prediction for Augustus_model.g21377.t1 Valid prediction for GlimmerHMM_glimmerT_32019-T1 Valid prediction for snap_scaffold_13-snap.547-T1 Valid prediction for GlimmerHMM_glimmerT_32008-T1 Valid prediction for GlimmerHMM_glimmerT_31988-T1 Valid prediction for snap_scaffold_13-snap.554-T1 Valid prediction for GeneMark_model.54906_t Couldn't classify 14645, 14959 Sorry, prediction pasa_asmbl_9480.p1 fails validation. (CTA) TC 14645-14959 GT AGG (ATC) AG 15241-15433 GT TGG (GTG) AG 15596-15660 GT AGG (GCC) AG 15795-15895 GT AAG (ACA) AG 15999-16069 GT GAG (ATA) AG 16198-16282 GT TGG (CCA) AG 16468-16566 GT ATG (ATA) AG 16654-16723 GT CTG (GGG) AG 16809-16904 GT AAG (GAT) AG 17014-17142 GT TGG (GTG) AG 17281-17388 GG GAG -recovered pasa_asmbl_9480.p1, terminal, 17281, 17388 -recovered pasa_asmbl_9480.p1, internal, 15241, 15433 -recovered pasa_asmbl_9480.p1, internal, 15596, 15660 -recovered pasa_asmbl_9480.p1, internal, 15795, 15895 -recovered pasa_asmbl_9480.p1, internal, 15999, 16069 -recovered pasa_asmbl_9480.p1, internal, 16198, 16282 -recovered pasa_asmbl_9480.p1, internal, 16468, 16566 -recovered pasa_asmbl_9480.p1, internal, 16654, 16723 -recovered pasa_asmbl_9480.p1, internal, 16809, 16904 -recovered pasa_asmbl_9480.p1, internal, 17014, 17142 Valid prediction for GlimmerHMM_glimmerT_31992-T1 Valid prediction for snap_scaffold_13-snap.566-T1 Valid prediction for snap_scaffold_13-snap.561-T1 -loading the search evidence (protein and EST search results, strand: -) -scoring exons (strand: -) -building DP trellis -building trellis in range 1 - 206501 -exon list size: 608 building trellis 0.2 0.3 0.5 0.7 0.8 1.0 1.1 1.3 1.5 1.6 1.8 2.0 2.1 2.3 2.5 2.6 2.8 3.0 3.1 3.3 3.4 3.6 3.8 3.9 4.1 4.3 4.4 4.6 4.8 4.9 5.1 5.2 5.4 5.6 5.7 5.9 6.1 6.2 6.4 6.6 6.7 6.9 7.0 7.2 7.4 7.5 7.7 7.9 8.0 8.2 8.4 8.5 8.7 8.9 9.0 9.2 9.3 9.5 9.7 9.8 10.0 10.2 10.3 10.5 10.7 10.8 11.0 11.1 11.3 11.5 11.6 11.8 12.0 12.1 12.3 12.5 12.6 12.8 13.0 13.1 13.3 13.4 13.6 13.8 13.9 14.1 14.3 14.4 14.6 14.8 14.9 15.1 15.2 15.4 15.6 15.7 15.9 16.1 16.2 16.4 16.6 16.7 16.9 17.0 17.2 17.4 17.5 17.7 17.9 18.0 18.2 18.4 18.5 18.7 18.9 19.0 19.2 19.3 19.5 19.7 19.8 20.0 20.2 20.3 20.5 20.7 20.8 21.0 21.1 21.3 21.5 21.6 21.8 22.0 22.1 22.3 22.5 22.6 22.8 23.0 23.1 23.3 23.4 23.6 23.8 23.9 24.1 24.3 24.4 24.6 24.8 24.9 25.1 25.2 25.4 25.6 25.7 25.9 26.1 26.2 26.4 26.6 26.7 26.9 27.0 27.2 27.4 27.5 27.7 27.9 28.0 28.2 28.4 28.5 28.7 28.9 29.0 29.2 29.3 29.5 29.7 29.8 30.0 30.2 30.3 30.5 30.7 30.8 31.0 31.1 31.3 31.5 31.6 31.8 32.0 32.1 32.3 32.5 32.6 32.8 33.0 33.1 33.3 33.4 33.6 33.8 33.9 34.1 34.3 34.4 34.6 34.8 34.9 35.1 35.2 35.4 35.6 35.7 35.9 36.1 36.2 36.4 36.6 36.7 36.9 37.0 37.2 37.4 37.5 37.7 37.9 38.0 38.2 38.4 38.5 38.7 38.9 39.0 39.2 39.3 39.5 39.7 39.8 40.0 40.2 40.3 40.5 40.7 40.8 41.0 41.1 41.3 41.5 41.6 41.8 42.0 42.1 42.3 42.5 42.6 42.8 43.0 43.1 43.3 43.4 43.6 43.8 43.9 44.1 44.3 44.4 44.6 44.8 44.9 45.1 45.2 45.4 45.6 45.7 45.9 46.1 46.2 46.4 46.6 46.7 46.9 47.0 47.2 47.4 47.5 47.7 47.9 48.0 48.2 48.4 48.5 48.7 48.9 49.0 49.2 49.3 49.5 49.7 49.8 50.0 50.2 50.3 50.5 50.7 50.8 51.0 51.1 51.3 51.5 51.6 51.8 52.0 52.1 52.3 52.5 52.6 52.8 53.0 53.1 53.3 53.4 53.6 53.8 53.9 54.1 54.3 54.4 54.6 54.8 54.9 55.1 55.2 55.4 55.6 55.7 55.9 56.1 56.2 56.4 56.6 56.7 56.9 57.0 57.2 57.4 57.5 57.7 57.9 58.0 58.2 58.4 58.5 58.7 58.9 59.0 59.2 59.3 59.5 59.7 59.8 60.0 60.2 60.3 60.5 60.7 60.8 61.0 61.1 61.3 61.5 61.6 61.8 62.0 62.1 62.3 62.5 62.6 62.8 63.0 63.1 63.3 63.4 63.6 63.8 63.9 64.1 64.3 64.4 64.6 64.8 64.9 65.1 65.2 65.4 65.6 65.7 65.9 66.1 66.2 66.4 66.6 66.7 66.9 67.0 67.2 67.4 67.5 67.7 67.9 68.0 68.2 68.4 68.5 68.7 68.9 69.0 69.2 69.3 69.5 69.7 69.8 70.0 70.2 70.3 70.5 70.7 70.8 71.0 71.1 71.3 71.5 71.6 71.8 72.0 72.1 72.3 72.5 72.6 72.8 73.0 73.1 73.3 73.4 73.6 73.8 73.9 74.1 74.3 74.4 74.6 74.8 74.9 75.1 75.2 75.4 75.6 75.7 75.9 76.1 76.2 76.4 76.6 76.7 76.9 77.0 77.2 77.4 77.5 77.7 77.9 78.0 78.2 78.4 78.5 78.7 78.9 79.0 79.2 79.3 79.5 79.7 79.8 80.0 80.2 80.3 80.5 80.7 80.8 81.0 81.1 81.3 81.5 81.6 81.8 82.0 82.1 82.3 82.5 82.6 82.8 83.0 83.1 83.3 83.4 83.6 83.8 83.9 84.1 84.3 84.4 84.6 84.8 84.9 85.1 85.2 85.4 85.6 85.7 85.9 86.1 86.2 86.4 86.6 86.7 86.9 87.0 87.2 87.4 87.5 87.7 87.9 88.0 88.2 88.4 88.5 88.7 88.9 89.0 89.2 89.3 89.5 89.7 89.8 90.0 90.2 90.3 90.5 90.7 90.8 91.0 91.1 91.3 91.5 91.6 91.8 92.0 92.1 92.3 92.5 92.6 92.8 93.0 93.1 93.3 93.4 93.6 93.8 93.9 94.1 94.3 94.4 94.6 94.8 94.9 95.1 95.2 95.4 95.6 95.7 95.9 96.1 96.2 96.4 96.6 96.7 96.9 97.0 97.2 97.4 97.5 97.7 97.9 98.0 98.2 98.4 98.5 98.7 98.9 99.0 99.2 99.3 99.5 99.7 99.8 -found 40 predictions from path traversal -reporting highest scoring path thru the trellis. -found 35 predictions persist after filtering for low support -building DP trellis -building trellis in range 194376 - 206501 -exon list size: 21 building trellis 4.3 8.7 13.0 17.4 21.7 26.1 30.4 34.8 39.1 43.5 47.8 52.2 56.5 60.9 65.2 69.6 73.9 78.3 82.6 87.0 91.3 95.7 -found 1 predictions from path traversal -reporting highest scoring path thru the trellis. -found 0 predictions persist after filtering for low support -building DP trellis -building trellis in range 194834 - 206501 -exon list size: 18 building trellis 5.0 10.0 15.0 20.0 25.0 30.0 35.0 40.0 45.0 50.0 55.0 60.0 65.0 70.0 75.0 80.0 85.0 90.0 95.0 -found 1 predictions from path traversal -reporting highest scoring path thru the trellis. -found 1 predictions persist after filtering for low support