-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_13/scaffold_13_15789125-16080885 -reading genomic sequence. ** Processing features (+) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: +) -loading gene prediction evidence. (strand: +)Valid prediction for GeneMark_model.57877_t Valid prediction for GeneMark_model.57928_t Valid prediction for snap_scaffold_13-snap.3081-T1 Valid prediction for snap_scaffold_13-snap.3128-T1 Valid prediction for GeneMark_model.57921_t Valid prediction for snap_scaffold_13-snap.3079-T1 Valid prediction for GlimmerHMM_glimmerT_33720-T1 Valid prediction for GeneMark_model.57859_t Valid prediction for GlimmerHMM_glimmerT_33721-T1 Valid prediction for snap_scaffold_13-snap.3130-T1 Valid prediction for GeneMark_model.57879_t Valid prediction for GlimmerHMM_glimmerT_33732-T1 Valid prediction for GeneMark_model.57901_t Valid prediction for snap_scaffold_13-snap.3076-T1 Valid prediction for Augustus_model.g22638.t1 Couldn't classify 201138, 201441 Couldn't classify 201557, 201807 Sorry, prediction pasa_asmbl_11585.p1 fails validation. (CAG) AG 201138-201441 GT ACG (CAA) AG 201557-201807 TC GTT -recovered pasa_asmbl_11585.p1, internal, 201138, 201441 Valid prediction for GeneMark_model.57899_t Valid prediction for GeneMark_model.57937_t Valid prediction for GeneMark_model.57909_t Valid prediction for GlimmerHMM_glimmerT_33729-T1 Valid prediction for snap_scaffold_13-snap.3095-T1 Valid prediction for snap_scaffold_13-snap.3074-T1 Valid prediction for GeneMark_model.57853_t Valid prediction for GeneMark_model.57906_t Valid prediction for GeneMark_model.57850_t Valid prediction for GeneMark_model.57867_t Valid prediction for GeneMark_model.57942_t Valid prediction for GeneMark_model.57881_t Valid prediction for GeneMark_model.57869_t Valid prediction for snap_scaffold_13-snap.3083-T1 Valid prediction for Augustus_model.g22642.t1 Valid prediction for snap_scaffold_13-snap.3112-T1 Valid prediction for snap_scaffold_13-snap.3106-T1 Valid prediction for HiQ_model.g22641.t1 Valid prediction for GlimmerHMM_glimmerT_33702-T1 Valid prediction for GeneMark_model.57864_t Valid prediction for snap_scaffold_13-snap.3135-T1 Valid prediction for snap_scaffold_13-snap.3121-T1 Valid prediction for Augustus_model.g22635.t1 Valid prediction for GeneMark_model.57871_t Valid prediction for Augustus_model.g22634.t1 Valid prediction for GlimmerHMM_glimmerT_33723-T1 Valid prediction for snap_scaffold_13-snap.3088-T1 Valid prediction for GeneMark_model.57888_t Valid prediction for snap_scaffold_13-snap.3100-T1 Valid prediction for snap_scaffold_13-snap.3097-T1 Valid prediction for Augustus_model.g22649.t1 Valid prediction for GlimmerHMM_glimmerT_33737-T1 Valid prediction for GlimmerHMM_glimmerT_33707-T1 Valid prediction for Augustus_model.g22652.t1 Valid prediction for GlimmerHMM_glimmerT_33708-T1 Valid prediction for snap_scaffold_13-snap.3082-T1 Valid prediction for GeneMark_model.57872_t Valid prediction for snap_scaffold_13-snap.3084-T1 Valid prediction for GeneMark_model.57930_t Valid prediction for GeneMark_model.57946_t Valid prediction for GeneMark_model.57944_t Valid prediction for GeneMark_model.57936_t Valid prediction for Augustus_model.g22646.t1 Valid prediction for GeneMark_model.57916_t Valid prediction for GeneMark_model.57918_t Valid prediction for GeneMark_model.57914_t Valid prediction for GeneMark_model.57861_t Couldn't classify 256450, 256721 Sorry, prediction pasa_asmbl_11524.p1 fails validation. (AAG) CC 256450-256721 GT AGG (CCA) AG 257992-258077 GT GGG (CGG) AG 259097-259572 TG GAT -recovered pasa_asmbl_11524.p1, terminal, 259097, 259572 -recovered pasa_asmbl_11524.p1, internal, 257992, 258077 Valid prediction for GeneMark_model.57857_t Valid prediction for Augustus_model.g22627.t1 Valid prediction for snap_scaffold_13-snap.3115-T1 Couldn't classify 212781, 212840 Sorry, prediction CodingQuarry_transcript_13308-T1 fails validation. (ATG) GA 209726-209798 GT AGG (GTA) AG 210577-210825 GT GGG (ACC) AG 210918-211019 GT AGG (GGG) AG 211143-211234 GT AGG (GTA) AG 211538-211720 GT AGG (TGT) AA 212781-212840 GT AGG (GTG) AG 213049-213144 CA GAC -recovered CodingQuarry_transcript_13308-T1, initial, 209726, 209798 -recovered CodingQuarry_transcript_13308-T1, terminal, 213049, 213144 -recovered CodingQuarry_transcript_13308-T1, internal, 210577, 210825 -recovered CodingQuarry_transcript_13308-T1, internal, 210918, 211019 -recovered CodingQuarry_transcript_13308-T1, internal, 211143, 211234 -recovered CodingQuarry_transcript_13308-T1, internal, 211538, 211720 Valid prediction for Augustus_model.g22644.t1 Couldn't classify 193264, 193284 Couldn't classify 193998, 194223 Sorry, prediction CodingQuarry_transcript_13307-T1 fails validation. (ATG) AG 193264-193284 GA GTG (GTC) AT 193998-194223 GT GGG (TTT) AG 195527-195570 GT GAG -recovered CodingQuarry_transcript_13307-T1, terminal, 195527, 195570 -recovered CodingQuarry_transcript_13307-T1, internal, 195527, 195570 Valid prediction for GeneMark_model.57866_t Valid prediction for GlimmerHMM_glimmerT_33697-T1 Valid prediction for snap_scaffold_13-snap.3102-T1 Valid prediction for GlimmerHMM_glimmerT_33731-T1 Valid prediction for GeneMark_model.57907_t Valid prediction for GeneMark_model.57897_t Valid prediction for GeneMark_model.57895_t Valid prediction for GeneMark_model.57912_t Valid prediction for GlimmerHMM_glimmerT_33733-T1 Valid prediction for GeneMark_model.57934_t Valid prediction for GeneMark_model.57890_t Valid prediction for snap_scaffold_13-snap.3123-T1 Couldn't classify 287248, 287700 Sorry, prediction pasa_asmbl_11528.p2 fails validation. (ATG) TG 287248-287700 GA GCG Valid prediction for GlimmerHMM_glimmerT_33735-T1 Valid prediction for HiQ_model.g22647.t1 Valid prediction for GeneMark_model.57905_t Valid prediction for GeneMark_model.57893_t Valid prediction for snap_scaffold_13-snap.3077-T1 Valid prediction for Augustus_model.g22628.t1 Valid prediction for snap_scaffold_13-snap.3085-T1 Valid prediction for GlimmerHMM_glimmerT_33724-T1 Valid prediction for GlimmerHMM_glimmerT_33726-T1 Valid prediction for snap_scaffold_13-snap.3093-T1 Valid prediction for snap_scaffold_13-snap.3099-T1 Valid prediction for snap_scaffold_13-snap.3086-T1 Valid prediction for GeneMark_model.57892_t Valid prediction for snap_scaffold_13-snap.3091-T1 Valid prediction for snap_scaffold_13-snap.3116-T1 Valid prediction for GeneMark_model.57886_t Valid prediction for snap_scaffold_13-snap.3109-T1 Valid prediction for snap_scaffold_13-snap.3134-T1 Valid prediction for GeneMark_model.57908_t Valid prediction for GeneMark_model.57856_t Valid prediction for GeneMark_model.57885_t Valid prediction for GeneMark_model.57851_t Valid prediction for GeneMark_model.57939_t Valid prediction for snap_scaffold_13-snap.3090-T1 Couldn't classify 289540, 289896 Sorry, prediction pasa_asmbl_11529.p1 fails validation. (GGG) CA 289540-289896 TT GAT Valid prediction for GeneMark_model.57926_t Valid prediction for snap_scaffold_13-snap.3119-T1 Valid prediction for GeneMark_model.57854_t Valid prediction for GlimmerHMM_glimmerT_33706-T1 Valid prediction for GeneMark_model.57923_t Valid prediction for GlimmerHMM_glimmerT_33739-T1 Valid prediction for GlimmerHMM_glimmerT_33698-T1 Valid prediction for GeneMark_model.57874_t Valid prediction for Augustus_model.g22648.t1 Valid prediction for GlimmerHMM_glimmerT_33713-T1 -loading the search evidence (protein and EST search results, strand: +) -scoring exons (strand: +) ** Processing features (-) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: -) -loading gene prediction evidence. (strand: -)Valid prediction for GeneMark_model.57875_t Valid prediction for GlimmerHMM_glimmerT_33714-T1 Valid prediction for GeneMark_model.57910_t Valid prediction for snap_scaffold_13-snap.3118-T1 Valid prediction for GeneMark_model.57915_t Valid prediction for GeneMark_model.57917_t Valid prediction for HiQ_model.g22631.t1 Valid prediction for Augustus_model.g22645.t1 Valid prediction for GeneMark_model.57940_t Valid prediction for GeneMark_model.57898_t Valid prediction for GeneMark_model.57865_t Valid prediction for GlimmerHMM_glimmerT_33703-T1 Valid prediction for GlimmerHMM_glimmerT_33699-T1 Couldn't classify 63118, 63203 Couldn't classify 64459, 64669 Sorry, prediction pasa_asmbl_10230.p1 fails validation. (TAC) CG 63118-63203 GT AAG (GTA) AG 63853-64092 GT TCG (GAT) AG 64459-64669 TC CCT -recovered pasa_asmbl_10230.p1, internal, 63853, 64092 Valid prediction for snap_scaffold_13-snap.3105-T1 Valid prediction for GlimmerHMM_glimmerT_33727-T1 Valid prediction for GeneMark_model.57913_t Valid prediction for GlimmerHMM_glimmerT_33738-T1 Valid prediction for GeneMark_model.57943_t Valid prediction for GeneMark_model.57927_t Valid prediction for GeneMark_model.57922_t Valid prediction for Augustus_model.g22651.t1 Valid prediction for GeneMark_model.57903_t Couldn't classify 83793, 84159 Sorry, prediction pasa_asmbl_10226.p1 fails validation. (ATG) AT 82339-82343 GT AGG (TCG) AG 83793-84159 GA AGG -recovered pasa_asmbl_10226.p1, initial, 82339, 82343 Valid prediction for CodingQuarry_transcript_13306-T1 Valid prediction for GlimmerHMM_glimmerT_33712-T1 Valid prediction for snap_scaffold_13-snap.3080-T1 Valid prediction for GlimmerHMM_glimmerT_33725-T1 Valid prediction for Augustus_model.g22639.t1 Couldn't classify 222878, 222972 Sorry, prediction GeneMark_model.57868_t fails validation. (ATG) AG 222216-222264 GT GGG (GTC) AG 222559-222663 GT GGG (GGC) AG 222878-222972 GT AGG -recovered GeneMark_model.57868_t, initial, 222216, 222264 -recovered GeneMark_model.57868_t, internal, 222216, 222264 -recovered GeneMark_model.57868_t, internal, 222559, 222663 -recovered GeneMark_model.57868_t, internal, 222878, 222972 Valid prediction for GeneMark_model.57896_t Valid prediction for snap_scaffold_13-snap.3104-T1 Valid prediction for snap_scaffold_13-snap.3107-T1 Valid prediction for GlimmerHMM_glimmerT_33700-T1 Valid prediction for GeneMark_model.57855_t Valid prediction for Augustus_model.g22630.t1 Valid prediction for Augustus_model.g22633.t1 Valid prediction for snap_scaffold_13-snap.3125-T1 Valid prediction for GeneMark_model.57924_t Valid prediction for GeneMark_model.57945_t Valid prediction for GlimmerHMM_glimmerT_33709-T1 Valid prediction for GlimmerHMM_glimmerT_33716-T1 Valid prediction for GeneMark_model.57925_t Valid prediction for GeneMark_model.57911_t Valid prediction for Augustus_model.g22637.t1 Valid prediction for GlimmerHMM_glimmerT_33715-T1 Valid prediction for snap_scaffold_13-snap.3132-T1 Valid prediction for snap_scaffold_13-snap.3098-T1 Sorry, intron length (9) is less than minimum required (10) Sorry, intron length (3) is less than minimum required (10) Valid prediction for snap_scaffold_13-snap.3120-T1 Valid prediction for snap_scaffold_13-snap.3113-T1 Valid prediction for GlimmerHMM_glimmerT_33711-T1 Valid prediction for pasa_asmbl_10224.p1 Valid prediction for Augustus_model.g22650.t1 Valid prediction for GlimmerHMM_glimmerT_33701-T1 Valid prediction for GeneMark_model.57902_t Valid prediction for snap_scaffold_13-snap.3126-T1 Valid prediction for GlimmerHMM_glimmerT_33722-T1 Valid prediction for GlimmerHMM_glimmerT_33730-T1 Valid prediction for GlimmerHMM_glimmerT_33728-T1 Valid prediction for snap_scaffold_13-snap.3103-T1 Valid prediction for snap_scaffold_13-snap.3089-T1 Valid prediction for GeneMark_model.57931_t Valid prediction for snap_scaffold_13-snap.3133-T1 Valid prediction for GeneMark_model.57904_t Valid prediction for snap_scaffold_13-snap.3114-T1 Sorry, intron length (9) is less than minimum required (10) Valid prediction for GeneMark_model.57878_t Valid prediction for snap_scaffold_13-snap.3136-T1 Valid prediction for snap_scaffold_13-snap.3075-T1 Valid prediction for snap_scaffold_13-snap.3101-T1 Valid prediction for snap_scaffold_13-snap.3131-T1 Valid prediction for GeneMark_model.57941_t Valid prediction for GeneMark_model.57863_t Valid prediction for GeneMark_model.57900_t Couldn't classify 60439, 60539 Sorry, prediction pasa_asmbl_10231.p1 fails validation. (ATG) CC 58505-58735 GT AGG (GTT) AG 59329-59449 GT AGG (GCG) AG 60439-60539 GT GGG -recovered pasa_asmbl_10231.p1, initial, 58505, 58735 -recovered pasa_asmbl_10231.p1, internal, 59329, 59449 -recovered pasa_asmbl_10231.p1, internal, 60439, 60539 Valid prediction for GeneMark_model.57935_t Valid prediction for GlimmerHMM_glimmerT_33710-T1 Valid prediction for GeneMark_model.57947_t Valid prediction for Augustus_model.g22640.t1 Valid prediction for GlimmerHMM_glimmerT_33719-T1 Valid prediction for snap_scaffold_13-snap.3122-T1 Valid prediction for GeneMark_model.57884_t Valid prediction for GeneMark_model.57870_t Valid prediction for GeneMark_model.57919_t Valid prediction for snap_scaffold_13-snap.3111-T1 Valid prediction for GlimmerHMM_glimmerT_33736-T1 Valid prediction for Augustus_model.g22636.t1 Valid prediction for GeneMark_model.57882_t Valid prediction for HiQ_model.g22643.t1 Valid prediction for CodingQuarry_transcript_13309-T1 Valid prediction for snap_scaffold_13-snap.3073-T1 Valid prediction for GeneMark_model.57894_t Valid prediction for snap_scaffold_13-snap.3129-T1 Valid prediction for GeneMark_model.57891_t Valid prediction for GeneMark_model.57929_t Valid prediction for GlimmerHMM_glimmerT_33705-T1 Valid prediction for GeneMark_model.57887_t Valid prediction for snap_scaffold_13-snap.3127-T1 Valid prediction for GeneMark_model.57933_t Valid prediction for GeneMark_model.57860_t Valid prediction for snap_scaffold_13-snap.3110-T1 Valid prediction for snap_scaffold_13-snap.3092-T1 Valid prediction for snap_scaffold_13-snap.3078-T1 Valid prediction for snap_scaffold_13-snap.3087-T1 Valid prediction for GeneMark_model.57889_t Valid prediction for GeneMark_model.57852_t Valid prediction for snap_scaffold_13-snap.3096-T1 Valid prediction for snap_scaffold_13-snap.3108-T1 Valid prediction for GeneMark_model.57938_t Couldn't classify 219398, 219441 Couldn't classify 220473, 220511 Sorry, prediction pasa_asmbl_10356.p1 fails validation. (CTG) CT 219398-219441 GT AGG (GAA) AG 219774-219867 GT AGG (GTT) AG 220087-220218 GT AGG (TTG) AG 220473-220511 AC GCA -recovered pasa_asmbl_10356.p1, internal, 219774, 219867 -recovered pasa_asmbl_10356.p1, internal, 220087, 220218 Valid prediction for GeneMark_model.57920_t Valid prediction for GlimmerHMM_glimmerT_33704-T1 Valid prediction for GlimmerHMM_glimmerT_33734-T1 Valid prediction for Augustus_model.g22629.t1 Valid prediction for GeneMark_model.57876_t Valid prediction for snap_scaffold_13-snap.3117-T1 Valid prediction for snap_scaffold_13-snap.3094-T1 Valid prediction for GeneMark_model.57862_t Couldn't classify 70334, 70550 Sorry, prediction pasa_asmbl_10228.p1 fails validation. (AGT) AG 70334-70550 GT TGG (CCG) AG 71215-71308 GT CGG (GAT) AG 71963-72056 GT AGG (ACT) AG 72169-72339 GT AGG (GAG) AG 72515-72612 GT GGG (GGA) AG 72998-73154 AA AGA -recovered pasa_asmbl_10228.p1, terminal, 72998, 73154 -recovered pasa_asmbl_10228.p1, internal, 70334, 70550 -recovered pasa_asmbl_10228.p1, internal, 71215, 71308 -recovered pasa_asmbl_10228.p1, internal, 71963, 72056 -recovered pasa_asmbl_10228.p1, internal, 72169, 72339 -recovered pasa_asmbl_10228.p1, internal, 72515, 72612 Valid prediction for snap_scaffold_13-snap.3124-T1 Valid prediction for Augustus_model.g22632.t1 Valid prediction for GeneMark_model.57880_t Valid prediction for GlimmerHMM_glimmerT_33717-T1 Valid prediction for GlimmerHMM_glimmerT_33718-T1 -loading the search evidence (protein and EST search results, strand: -) -scoring exons (strand: -)Error with prediction: snap lend_intergenic: 13346, rend_intergenic: 6543 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 17028, rend_intergenic: 13481 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 23150, rend_intergenic: 17615 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 29340, rend_intergenic: 29047 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 30606, rend_intergenic: 30113 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 39610, rend_intergenic: 32033 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 73082, rend_intergenic: 53912 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 83662, rend_intergenic: 74185 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 84127, rend_intergenic: 83819 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 93572, rend_intergenic: 84158 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 96477, rend_intergenic: 93960 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 100569, rend_intergenic: 100149 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 103191, rend_intergenic: 100618 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 113451, rend_intergenic: 104401 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 120922, rend_intergenic: 115851 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 126834, rend_intergenic: 123265 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 155128, rend_intergenic: 127821 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 163554, rend_intergenic: 155168 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 167774, rend_intergenic: 165842 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 173386, rend_intergenic: 169250 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 185874, rend_intergenic: 181714 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 196107, rend_intergenic: 187351 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 201843, rend_intergenic: 196391 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 213550, rend_intergenic: 210501 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 218224, rend_intergenic: 218051 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 233047, rend_intergenic: 218286 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 249191, rend_intergenic: 239071 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 262390, rend_intergenic: 256234 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 266968, rend_intergenic: 262616 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 286624, rend_intergenic: 282451 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 289896, rend_intergenic: 287358 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -building DP trellis -building trellis in range 1 - 291761 -exon list size: 1311 building trellis 0.1 0.2 0.2 0.3 0.4 0.5 0.5 0.6 0.7 0.8 0.8 0.9 1.0 1.1 1.1 1.2 1.3 1.4 1.4 1.5 1.6 1.7 1.8 1.8 1.9 2.0 2.1 2.1 2.2 2.3 2.4 2.4 2.5 2.6 2.7 2.7 2.8 2.9 3.0 3.0 3.1 3.2 3.3 3.4 3.4 3.5 3.6 3.7 3.7 3.8 3.9 4.0 4.0 4.1 4.2 4.3 4.3 4.4 4.5 4.6 4.6 4.7 4.8 4.9 5.0 5.0 5.1 5.2 5.3 5.3 5.4 5.5 5.6 5.6 5.7 5.8 5.9 5.9 6.0 6.1 6.2 6.2 6.3 6.4 6.5 6.5 6.6 6.7 6.8 6.9 6.9 7.0 7.1 7.2 7.2 7.3 7.4 7.5 7.5 7.6 7.7 7.8 7.8 7.9 8.0 8.1 8.1 8.2 8.3 8.4 8.5 8.5 8.6 8.7 8.8 8.8 8.9 9.0 9.1 9.1 9.2 9.3 9.4 9.4 9.5 9.6 9.7 9.7 9.8 9.9 10.0 10.1 10.1 10.2 10.3 10.4 10.4 10.5 10.6 10.7 10.7 10.8 10.9 11.0 11.0 11.1 11.2 11.3 11.3 11.4 11.5 11.6 11.7 11.7 11.8 11.9 12.0 12.0 12.1 12.2 12.3 12.3 12.4 12.5 12.6 12.6 12.7 12.8 12.9 12.9 13.0 13.1 13.2 13.3 13.3 13.4 13.5 13.6 13.6 13.7 13.8 13.9 13.9 14.0 14.1 14.2 14.2 14.3 14.4 14.5 14.5 14.6 14.7 14.8 14.9 14.9 15.0 15.1 15.2 15.2 15.3 15.4 15.5 15.5 15.6 15.7 15.8 15.8 15.9 16.0 16.1 16.1 16.2 16.3 16.4 16.5 16.5 16.6 16.7 16.8 16.8 16.9 17.0 17.1 17.1 17.2 17.3 17.4 17.4 17.5 17.6 17.7 17.7 17.8 17.9 18.0 18.1 18.1 18.2 18.3 18.4 18.4 18.5 18.6 18.7 18.7 18.8 18.9 19.0 19.0 19.1 19.2 19.3 19.3 19.4 19.5 19.6 19.6 19.7 19.8 19.9 20.0 20.0 20.1 20.2 20.3 20.3 20.4 20.5 20.6 20.6 20.7 20.8 20.9 20.9 21.0 21.1 21.2 21.2 21.3 21.4 21.5 21.6 21.6 21.7 21.8 21.9 21.9 22.0 22.1 22.2 22.2 22.3 22.4 22.5 22.5 22.6 22.7 22.8 22.8 22.9 23.0 23.1 23.2 23.2 23.3 23.4 23.5 23.5 23.6 23.7 23.8 23.8 23.9 24.0 24.1 24.1 24.2 24.3 24.4 24.4 24.5 24.6 24.7 24.8 24.8 24.9 25.0 25.1 25.1 25.2 25.3 25.4 25.4 25.5 25.6 25.7 25.7 25.8 25.9 26.0 26.0 26.1 26.2 26.3 26.4 26.4 26.5 26.6 26.7 26.7 26.8 26.9 27.0 27.0 27.1 27.2 27.3 27.3 27.4 27.5 27.6 27.6 27.7 27.8 27.9 28.0 28.0 28.1 28.2 28.3 28.3 28.4 28.5 28.6 28.6 28.7 28.8 28.9 28.9 29.0 29.1 29.2 29.2 29.3 29.4 29.5 29.6 29.6 29.7 29.8 29.9 29.9 30.0 30.1 30.2 30.2 30.3 30.4 30.5 30.5 30.6 30.7 30.8 30.8 30.9 31.0 31.1 31.2 31.2 31.3 31.4 31.5 31.5 31.6 31.7 31.8 31.8 31.9 32.0 32.1 32.1 32.2 32.3 32.4 32.4 32.5 32.6 32.7 32.7 32.8 32.9 33.0 33.1 33.1 33.2 33.3 33.4 33.4 33.5 33.6 33.7 33.7 33.8 33.9 34.0 34.0 34.1 34.2 34.3 34.3 34.4 34.5 34.6 34.7 34.7 34.8 34.9 35.0 35.0 35.1 35.2 35.3 35.3 35.4 35.5 35.6 35.6 35.7 35.8 35.9 35.9 36.0 36.1 36.2 36.3 36.3 36.4 36.5 36.6 36.6 36.7 36.8 36.9 36.9 37.0 37.1 37.2 37.2 37.3 37.4 37.5 37.5 37.6 37.7 37.8 37.9 37.9 38.0 38.1 38.2 38.2 38.3 38.4 38.5 38.5 38.6 38.7 38.8 38.8 38.9 39.0 39.1 39.1 39.2 39.3 39.4 39.5 39.5 39.6 39.7 39.8 39.8 39.9 40.0 40.1 40.1 40.2 40.3 40.4 40.4 40.5 40.6 40.7 40.7 40.8 40.9 41.0 41.1 41.1 41.2 41.3 41.4 41.4 41.5 41.6 41.7 41.7 41.8 41.9 42.0 42.0 42.1 42.2 42.3 42.3 42.4 42.5 42.6 42.7 42.7 42.8 42.9 43.0 43.0 43.1 43.2 43.3 43.3 43.4 43.5 43.6 43.6 43.7 43.8 43.9 43.9 44.0 44.1 44.2 44.2 44.3 44.4 44.5 44.6 44.6 44.7 44.8 44.9 44.9 45.0 45.1 45.2 45.2 45.3 45.4 45.5 45.5 45.6 45.7 45.8 45.8 45.9 46.0 46.1 46.2 46.2 46.3 46.4 46.5 46.5 46.6 46.7 46.8 46.8 46.9 47.0 47.1 47.1 47.2 47.3 47.4 47.4 47.5 47.6 47.7 47.8 47.8 47.9 48.0 48.1 48.1 48.2 48.3 48.4 48.4 48.5 48.6 48.7 48.7 48.8 48.9 49.0 49.0 49.1 49.2 49.3 49.4 49.4 49.5 49.6 49.7 49.7 49.8 49.9 50.0 50.0 50.1 50.2 50.3 50.3 50.4 50.5 50.6 50.6 50.7 50.8 50.9 51.0 51.0 51.1 51.2 51.3 51.3 51.4 51.5 51.6 51.6 51.7 51.8 51.9 51.9 52.0 52.1 52.2 52.2 52.3 52.4 52.5 52.6 52.6 52.7 52.8 52.9 52.9 53.0 53.1 53.2 53.2 53.3 53.4 53.5 53.5 53.6 53.7 53.8 53.8 53.9 54.0 54.1 54.2 54.2 54.3 54.4 54.5 54.5 54.6 54.7 54.8 54.8 54.9 55.0 55.1 55.1 55.2 55.3 55.4 55.4 55.5 55.6 55.7 55.8 55.8 55.9 56.0 56.1 56.1 56.2 56.3 56.4 56.4 56.5 56.6 56.7 56.7 56.8 56.9 57.0 57.0 57.1 57.2 57.3 57.3 57.4 57.5 57.6 57.7 57.7 57.8 57.9 58.0 58.0 58.1 58.2 58.3 58.3 58.4 58.5 58.6 58.6 58.7 58.8 58.9 58.9 59.0 59.1 59.2 59.3 59.3 59.4 59.5 59.6 59.6 59.7 59.8 59.9 59.9 60.0 60.1 60.2 60.2 60.3 60.4 60.5 60.5 60.6 60.7 60.8 60.9 60.9 61.0 61.1 61.2 61.2 61.3 61.4 61.5 61.5 61.6 61.7 61.8 61.8 61.9 62.0 62.1 62.1 62.2 62.3 62.4 62.5 62.5 62.6 62.7 62.8 62.8 62.9 63.0 63.1 63.1 63.2 63.3 63.4 63.4 63.5 63.6 63.7 63.7 63.8 63.9 64.0 64.1 64.1 64.2 64.3 64.4 64.4 64.5 64.6 64.7 64.7 64.8 64.9 65.0 65.0 65.1 65.2 65.3 65.3 65.4 65.5 65.6 65.7 65.7 65.8 65.9 66.0 66.0 66.1 66.2 66.3 66.3 66.4 66.5 66.6 66.6 66.7 66.8 66.9 66.9 67.0 67.1 67.2 67.3 67.3 67.4 67.5 67.6 67.6 67.7 67.8 67.9 67.9 68.0 68.1 68.2 68.2 68.3 68.4 68.5 68.5 68.6 68.7 68.8 68.8 68.9 69.0 69.1 69.2 69.2 69.3 69.4 69.5 69.5 69.6 69.7 69.8 69.8 69.9 70.0 70.1 70.1 70.2 70.3 70.4 70.4 70.5 70.6 70.7 70.8 70.8 70.9 71.0 71.1 71.1 71.2 71.3 71.4 71.4 71.5 71.6 71.7 71.7 71.8 71.9 72.0 72.0 72.1 72.2 72.3 72.4 72.4 72.5 72.6 72.7 72.7 72.8 72.9 73.0 73.0 73.1 73.2 73.3 73.3 73.4 73.5 73.6 73.6 73.7 73.8 73.9 74.0 74.0 74.1 74.2 74.3 74.3 74.4 74.5 74.6 74.6 74.7 74.8 74.9 74.9 75.0 75.1 75.2 75.2 75.3 75.4 75.5 75.6 75.6 75.7 75.8 75.9 75.9 76.0 76.1 76.2 76.2 76.3 76.4 76.5 76.5 76.6 76.7 76.8 76.8 76.9 77.0 77.1 77.2 77.2 77.3 77.4 77.5 77.5 77.6 77.7 77.8 77.8 77.9 78.0 78.1 78.1 78.2 78.3 78.4 78.4 78.5 78.6 78.7 78.8 78.8 78.9 79.0 79.1 79.1 79.2 79.3 79.4 79.4 79.5 79.6 79.7 79.7 79.8 79.9 80.0 80.0 80.1 80.2 80.3 80.4 80.4 80.5 80.6 80.7 80.7 80.8 80.9 81.0 81.0 81.1 81.2 81.3 81.3 81.4 81.5 81.6 81.6 81.7 81.8 81.9 81.9 82.0 82.1 82.2 82.3 82.3 82.4 82.5 82.6 82.6 82.7 82.8 82.9 82.9 83.0 83.1 83.2 83.2 83.3 83.4 83.5 83.5 83.6 83.7 83.8 83.9 83.9 84.0 84.1 84.2 84.2 84.3 84.4 84.5 84.5 84.6 84.7 84.8 84.8 84.9 85.0 85.1 85.1 85.2 85.3 85.4 85.5 85.5 85.6 85.7 85.8 85.8 85.9 86.0 86.1 86.1 86.2 86.3 86.4 86.4 86.5 86.6 86.7 86.7 86.8 86.9 87.0 87.1 87.1 87.2 87.3 87.4 87.4 87.5 87.6 87.7 87.7 87.8 87.9 88.0 88.0 88.1 88.2 88.3 88.3 88.4 88.5 88.6 88.7 88.7 88.8 88.9 89.0 89.0 89.1 89.2 89.3 89.3 89.4 89.5 89.6 89.6 89.7 89.8 89.9 89.9 90.0 90.1 90.2 90.3 90.3 90.4 90.5 90.6 90.6 90.7 90.8 90.9 90.9 91.0 91.1 91.2 91.2 91.3 91.4 91.5 91.5 91.6 91.7 91.8 91.9 91.9 92.0 92.1 92.2 92.2 92.3 92.4 92.5 92.5 92.6 92.7 92.8 92.8 92.9 93.0 93.1 93.1 93.2 93.3 93.4 93.5 93.5 93.6 93.7 93.8 93.8 93.9 94.0 94.1 94.1 94.2 94.3 94.4 94.4 94.5 94.6 94.7 94.7 94.8 94.9 95.0 95.0 95.1 95.2 95.3 95.4 95.4 95.5 95.6 95.7 95.7 95.8 95.9 96.0 96.0 96.1 96.2 96.3 96.3 96.4 96.5 96.6 96.6 96.7 96.8 96.9 97.0 97.0 97.1 97.2 97.3 97.3 97.4 97.5 97.6 97.6 97.7 97.8 97.9 97.9 98.0 98.1 98.2 98.2 98.3 98.4 98.5 98.6 98.6 98.7 98.8 98.9 98.9 99.0 99.1 99.2 99.2 99.3 99.4 99.5 99.5 99.6 99.7 99.8 99.8 99.9 -found 62 predictions from path traversal Error with prediction: snap lend_intergenic: 13346, rend_intergenic: 6543 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 17028, rend_intergenic: 13481 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 23150, rend_intergenic: 17615 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 29340, rend_intergenic: 29047 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 30606, rend_intergenic: 30113 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 39610, rend_intergenic: 32033 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 73082, rend_intergenic: 53912 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 83662, rend_intergenic: 74185 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 84127, rend_intergenic: 83819 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 93572, rend_intergenic: 84158 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 96477, rend_intergenic: 93960 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 100569, rend_intergenic: 100149 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 103191, rend_intergenic: 100618 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 113451, rend_intergenic: 104401 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 120922, rend_intergenic: 115851 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 126834, rend_intergenic: 123265 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 155128, rend_intergenic: 127821 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 163554, rend_intergenic: 155168 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 167774, rend_intergenic: 165842 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 173386, rend_intergenic: 169250 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 185874, rend_intergenic: 181714 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 196107, rend_intergenic: 187351 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 201843, rend_intergenic: 196391 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 213550, rend_intergenic: 210501 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 218224, rend_intergenic: 218051 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 233047, rend_intergenic: 218286 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 249191, rend_intergenic: 239071 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 262390, rend_intergenic: 256234 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 266968, rend_intergenic: 262616 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 286624, rend_intergenic: 282451 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 289896, rend_intergenic: 287358 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. GOT 5prime partial gene. -reporting highest scoring path thru the trellis. -found 37 predictions persist after filtering for low support