-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_13/scaffold_13_14397757-14653769 -reading genomic sequence. ** Processing features (+) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: +) -loading gene prediction evidence. (strand: +)Valid prediction for GeneMark_model.57428_t Valid prediction for GeneMark_model.57405_t Valid prediction for GeneMark_model.57448_t Valid prediction for GlimmerHMM_glimmerT_33538-T1 Valid prediction for snap_scaffold_13-snap.2761-T1 Valid prediction for GeneMark_model.57435_t Valid prediction for GeneMark_model.57459_t Valid prediction for GeneMark_model.57473_t Valid prediction for GlimmerHMM_glimmerT_33526-T1 Couldn't classify 252522, 252708 Sorry, prediction pasa_asmbl_11444.p1 fails validation. (ATG) CC 249250-249399 GT AGG (GAG) AG 249646-249777 GT AGG (GTT) AG 250068-250264 GT AAG (ACT) AG 252522-252708 GT CGG -recovered pasa_asmbl_11444.p1, initial, 249250, 249399 -recovered pasa_asmbl_11444.p1, internal, 249646, 249777 -recovered pasa_asmbl_11444.p1, internal, 250068, 250264 -recovered pasa_asmbl_11444.p1, internal, 252522, 252708 Valid prediction for snap_scaffold_13-snap.2775-T1 Sorry, intron length (6) is less than minimum required (10) Valid prediction for snap_scaffold_13-snap.2766-T1 Valid prediction for Augustus_model.g22494.t1 Valid prediction for GeneMark_model.57468_t Couldn't classify 10460, 10654 Couldn't classify 11543, 11653 Sorry, prediction pasa_asmbl_11664.p1 fails validation. (GAT) AG 10460-10654 GT AGG (GAC) AG 11017-11199 GT AGG (GAG) AG 11543-11653 GT AGG -recovered pasa_asmbl_11664.p1, internal, 10460, 10654 -recovered pasa_asmbl_11664.p1, internal, 11017, 11199 -recovered pasa_asmbl_11664.p1, internal, 11543, 11653 Valid prediction for GeneMark_model.57457_t Valid prediction for Augustus_model.g22496.t1 Valid prediction for GeneMark_model.57440_t Valid prediction for Augustus_model.g22495.t1 Couldn't classify 201638, 201661 Sorry, prediction GeneMark_model.57461_t fails validation. (GGG) AG 201638-201661 GT GAG (CGA) AG 201683-201694 GT AGG (AGA) AG 201791-201799 GT CAG (AGA) AG 201830-201844 GT AGG (GGT) AG 201867-201878 GT AGG (GGA) AG 201947-202134 GT CAG (GTG) AG 202454-202479 GT AGG (TCC) AG 203240-203248 CA AAC -recovered GeneMark_model.57461_t, terminal, 201638, 201661 -recovered GeneMark_model.57461_t, terminal, 203240, 203248 -recovered GeneMark_model.57461_t, internal, 201638, 201661 -recovered GeneMark_model.57461_t, internal, 201683, 201694 -recovered GeneMark_model.57461_t, internal, 201791, 201799 -recovered GeneMark_model.57461_t, internal, 201830, 201844 -recovered GeneMark_model.57461_t, internal, 201867, 201878 -recovered GeneMark_model.57461_t, internal, 201947, 202134 -recovered GeneMark_model.57461_t, internal, 202454, 202479 Valid prediction for GlimmerHMM_glimmerT_33530-T1 Valid prediction for snap_scaffold_13-snap.2789-T1 Valid prediction for Augustus_model.g22499.t1 Valid prediction for GeneMark_model.57410_t Valid prediction for CodingQuarry_transcript_13277-T1 Valid prediction for GlimmerHMM_glimmerT_33534-T1 Valid prediction for CodingQuarry_transcript_13278-T1 Valid prediction for GlimmerHMM_glimmerT_33523-T1 Valid prediction for GeneMark_model.57418_t Valid prediction for Augustus_model.g22512.t1 Valid prediction for GlimmerHMM_glimmerT_33511-T1 Valid prediction for GlimmerHMM_glimmerT_33512-T1 Valid prediction for snap_scaffold_13-snap.2778-T1 Valid prediction for GlimmerHMM_glimmerT_33516-T1 Valid prediction for GlimmerHMM_glimmerT_33522-T1 Valid prediction for Augustus_model.g22518.t1 Valid prediction for GlimmerHMM_glimmerT_33518-T1 Valid prediction for GeneMark_model.57453_t Valid prediction for snap_scaffold_13-snap.2795-T1 Valid prediction for snap_scaffold_13-snap.2781-T1 Valid prediction for Augustus_model.g22507.t1 Valid prediction for GeneMark_model.57467_t Valid prediction for Augustus_model.g22503.t1 Valid prediction for GeneMark_model.57403_t Valid prediction for GeneMark_model.57431_t Valid prediction for Augustus_model.g22497.t1 Valid prediction for GlimmerHMM_glimmerT_33519-T1 Valid prediction for GeneMark_model.57433_t Valid prediction for Augustus_model.g22506.t1 Valid prediction for snap_scaffold_13-snap.2805-T1 Valid prediction for GlimmerHMM_glimmerT_33507-T1 Valid prediction for snap_scaffold_13-snap.2772-T1 Valid prediction for snap_scaffold_13-snap.2763-T1 Valid prediction for GeneMark_model.57445_t Valid prediction for GlimmerHMM_glimmerT_33509-T1 Valid prediction for GlimmerHMM_glimmerT_33528-T1 Valid prediction for snap_scaffold_13-snap.2770-T1 Valid prediction for GeneMark_model.57424_t Valid prediction for GeneMark_model.57447_t Valid prediction for GlimmerHMM_glimmerT_33543-T1 Valid prediction for snap_scaffold_13-snap.2800-T1 Valid prediction for Augustus_model.g22498.t1 Valid prediction for GeneMark_model.57463_t Couldn't classify 34067, 34271 Sorry, prediction pasa_asmbl_11435.p1 fails validation. (CTT) TC 34067-34271 GT TGG (TTG) AG 35279-35415 GA AGG -recovered pasa_asmbl_11435.p1, terminal, 35279, 35415 Valid prediction for snap_scaffold_13-snap.2803-T1 Valid prediction for GlimmerHMM_glimmerT_33517-T1 Valid prediction for GeneMark_model.57414_t Valid prediction for GlimmerHMM_glimmerT_33529-T1 Valid prediction for GeneMark_model.57438_t Valid prediction for snap_scaffold_13-snap.2765-T1 Valid prediction for GeneMark_model.57422_t Valid prediction for GeneMark_model.57471_t Valid prediction for GeneMark_model.57450_t Valid prediction for GeneMark_model.57455_t Valid prediction for GeneMark_model.57416_t Valid prediction for snap_scaffold_13-snap.2792-T1 Valid prediction for GeneMark_model.57406_t Valid prediction for snap_scaffold_13-snap.2755-T1 Valid prediction for GlimmerHMM_glimmerT_33544-T1 Valid prediction for GlimmerHMM_glimmerT_33510-T1 Couldn't classify 54795, 54904 Couldn't classify 56068, 56167 Sorry, prediction pasa_asmbl_11438.p1 fails validation. (CAG) CC 54795-54904 GT AGG (CTC) AG 55061-55169 GT AGG (CTG) AG 55330-55514 GT AAG (GTC) AG 56068-56167 GC CTG -recovered pasa_asmbl_11438.p1, internal, 55061, 55169 -recovered pasa_asmbl_11438.p1, internal, 55330, 55514 -recovered pasa_asmbl_11438.p1, internal, 56068, 56167 Valid prediction for GlimmerHMM_glimmerT_33539-T1 Valid prediction for GeneMark_model.57451_t Valid prediction for snap_scaffold_13-snap.2784-T1 Valid prediction for GeneMark_model.57436_t Valid prediction for CodingQuarry_transcript_13276-T1 Valid prediction for Augustus_model.g22510.t1 Valid prediction for GlimmerHMM_glimmerT_33513-T1 Valid prediction for GeneMark_model.57465_t Valid prediction for GlimmerHMM_glimmerT_33506-T1 Valid prediction for GlimmerHMM_glimmerT_33531-T1 Valid prediction for Augustus_model.g22520.t1 Valid prediction for GeneMark_model.57426_t Valid prediction for GlimmerHMM_glimmerT_33521-T1 Valid prediction for GeneMark_model.57442_t Valid prediction for snap_scaffold_13-snap.2762-T1 Valid prediction for GlimmerHMM_glimmerT_33545-T1 Valid prediction for snap_scaffold_13-snap.2757-T1 Valid prediction for GlimmerHMM_glimmerT_33508-T1 Valid prediction for GlimmerHMM_glimmerT_33525-T1 Valid prediction for Augustus_model.g22509.t1 Couldn't classify 100899, 101005 Sorry, prediction pasa_asmbl_11440.p1 fails validation. (GCA) CC 100899-101005 GT GGG (CTT) AG 101465-101630 GT AGG (GAG) AG 102451-102621 CG AAC -recovered pasa_asmbl_11440.p1, terminal, 102451, 102621 -recovered pasa_asmbl_11440.p1, internal, 101465, 101630 Valid prediction for GlimmerHMM_glimmerT_33527-T1 Valid prediction for Augustus_model.g22513.t1 Valid prediction for GeneMark_model.57412_t Couldn't classify 19233, 19331 Sorry, prediction pasa_asmbl_11563.p3 fails validation. (ATG) AG 17852-17889 GT AGG (GAG) AG 18527-18848 GT CGG (GAG) AG 19233-19331 GC TGG -recovered pasa_asmbl_11563.p3, initial, 17852, 17889 -recovered pasa_asmbl_11563.p3, internal, 17852, 17889 -recovered pasa_asmbl_11563.p3, internal, 18527, 18848 -recovered pasa_asmbl_11563.p3, internal, 19233, 19331 Valid prediction for snap_scaffold_13-snap.2785-T1 Couldn't classify 20329, 20440 Sorry, prediction pasa_asmbl_11571.p1 fails validation. (GAG) CG 20329-20440 GT TGG (AGT) AG 20602-20870 GT AGG (GTG) AG 21495-21712 GT GGG (GAA) AG 21929-22046 GT AGG (GCG) AG 22392-22532 AG AAA -recovered pasa_asmbl_11571.p1, terminal, 22392, 22532 -recovered pasa_asmbl_11571.p1, internal, 20602, 20870 -recovered pasa_asmbl_11571.p1, internal, 21495, 21712 -recovered pasa_asmbl_11571.p1, internal, 21929, 22046 Valid prediction for snap_scaffold_13-snap.2796-T1 Valid prediction for snap_scaffold_13-snap.2797-T1 Valid prediction for GeneMark_model.57476_t Valid prediction for snap_scaffold_13-snap.2791-T1 Valid prediction for snap_scaffold_13-snap.2780-T1 Valid prediction for GeneMark_model.57408_t -loading the search evidence (protein and EST search results, strand: +) -scoring exons (strand: +) ** Processing features (-) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: -) -loading gene prediction evidence. (strand: -)Valid prediction for GeneMark_model.57470_t Valid prediction for Augustus_model.g22517.t1 Valid prediction for GlimmerHMM_glimmerT_33537-T1 Valid prediction for GlimmerHMM_glimmerT_33542-T1 Valid prediction for GeneMark_model.57409_t Valid prediction for GeneMark_model.57413_t Valid prediction for GlimmerHMM_glimmerT_33524-T1 Valid prediction for snap_scaffold_13-snap.2787-T1 Valid prediction for GeneMark_model.57475_t Couldn't classify 173572, 173635 Sorry, prediction GeneMark_model.57430_t fails validation. (ATG) CA 172509-172573 GT AGG (GGG) AG 172983-173051 GT CAG (AGG) AG 173079-173399 GT ATG (ATG) AG 173420-173451 GT TGG (GGC) AG 173572-173635 GT AAG -recovered GeneMark_model.57430_t, initial, 172509, 172573 -recovered GeneMark_model.57430_t, initial, 173420, 173451 -recovered GeneMark_model.57430_t, internal, 172983, 173051 -recovered GeneMark_model.57430_t, internal, 173079, 173399 -recovered GeneMark_model.57430_t, internal, 173420, 173451 -recovered GeneMark_model.57430_t, internal, 173572, 173635 Valid prediction for GeneMark_model.57449_t Valid prediction for GeneMark_model.57439_t Valid prediction for GeneMark_model.57456_t Valid prediction for snap_scaffold_13-snap.2801-T1 Valid prediction for snap_scaffold_13-snap.2769-T1 Sorry, intron length (4) is less than minimum required (10) Valid prediction for snap_scaffold_13-snap.2788-T1 Valid prediction for GeneMark_model.57421_t Valid prediction for GeneMark_model.57417_t Valid prediction for HiQ_model.g22516.t1 Valid prediction for GeneMark_model.57462_t Valid prediction for GeneMark_model.57444_t Valid prediction for snap_scaffold_13-snap.2779-T1 Sorry, intron length (5) is less than minimum required (10) Sorry, intron length (3) is less than minimum required (10) Sorry, intron length (6) is less than minimum required (10) Valid prediction for snap_scaffold_13-snap.2804-T1 Valid prediction for GeneMark_model.57425_t Valid prediction for GlimmerHMM_glimmerT_33535-T1 Valid prediction for snap_scaffold_13-snap.2802-T1 Valid prediction for GeneMark_model.57407_t Valid prediction for GeneMark_model.57427_t Valid prediction for Augustus_model.g22500.t1 Valid prediction for GeneMark_model.57454_t Valid prediction for GlimmerHMM_glimmerT_33536-T1 Valid prediction for snap_scaffold_13-snap.2756-T1 Valid prediction for snap_scaffold_13-snap.2798-T1 Valid prediction for GeneMark_model.57415_t Valid prediction for snap_scaffold_13-snap.2768-T1 Couldn't classify 212114, 212207 Sorry, prediction pasa_asmbl_10156.p2 fails validation. (ATG) TC 210929-211084 GT AGG (ACG) AG 211397-211554 GT AGG (CCA) AG 212114-212207 GT AGG -recovered pasa_asmbl_10156.p2, initial, 210929, 211084 -recovered pasa_asmbl_10156.p2, internal, 211397, 211554 -recovered pasa_asmbl_10156.p2, internal, 212114, 212207 Valid prediction for snap_scaffold_13-snap.2790-T1 Valid prediction for GeneMark_model.57437_t Valid prediction for snap_scaffold_13-snap.2793-T1 Valid prediction for HiQ_model.g22519.t1 Valid prediction for Augustus_model.g22511.t1 Valid prediction for CodingQuarry_transcript_13279-T1 Valid prediction for snap_scaffold_13-snap.2774-T1 Valid prediction for GeneMark_model.57446_t Valid prediction for snap_scaffold_13-snap.2794-T1 Valid prediction for Augustus_model.g22502.t1 Valid prediction for GlimmerHMM_glimmerT_33532-T1 Valid prediction for GeneMark_model.57434_t Valid prediction for snap_scaffold_13-snap.2786-T1 Valid prediction for GlimmerHMM_glimmerT_33520-T1 Valid prediction for HiQ_model.g22514.t1 Valid prediction for snap_scaffold_13-snap.2771-T1 Valid prediction for snap_scaffold_13-snap.2759-T1 Valid prediction for Augustus_model.g22508.t1 Valid prediction for GeneMark_model.57469_t Valid prediction for snap_scaffold_13-snap.2799-T1 Valid prediction for Augustus_model.g22505.t1 Valid prediction for GlimmerHMM_glimmerT_33515-T1 Valid prediction for snap_scaffold_13-snap.2764-T1 Valid prediction for GeneMark_model.57452_t Valid prediction for GeneMark_model.57432_t Couldn't classify 79144, 79426 Sorry, prediction pasa_asmbl_10284.p1 fails validation. (CTG) CT 79144-79426 GT AGG (GCT) AG 79693-79907 AC AGA -recovered pasa_asmbl_10284.p1, terminal, 79693, 79907 Valid prediction for GeneMark_model.57474_t Valid prediction for GeneMark_model.57466_t Valid prediction for GeneMark_model.57472_t Valid prediction for GeneMark_model.57419_t Valid prediction for GlimmerHMM_glimmerT_33514-T1 Valid prediction for HiQ_model.g22501.t1 Valid prediction for GeneMark_model.57458_t Valid prediction for GlimmerHMM_glimmerT_33541-T1 Valid prediction for snap_scaffold_13-snap.2767-T1 Valid prediction for snap_scaffold_13-snap.2760-T1 Valid prediction for GeneMark_model.57423_t Valid prediction for snap_scaffold_13-snap.2782-T1 Couldn't classify 68927, 69198 Couldn't classify 72187, 72303 Sorry, prediction pasa_asmbl_10174.p1 fails validation. (ACC) CG 68927-69198 GT CGG (TGA) AG 70888-71008 GT AGG (GAA) AG 71171-71200 GT AGG (CTG) AG 72187-72303 GT AGG -recovered pasa_asmbl_10174.p1, internal, 70888, 71008 -recovered pasa_asmbl_10174.p1, internal, 71171, 71200 -recovered pasa_asmbl_10174.p1, internal, 72187, 72303 Couldn't classify 187310, 187317 Sorry, prediction GeneMark_model.57429_t fails validation. (GGT) AG 187310-187317 GT AAG (CTC) AG 187357-187485 GT AGG (GGA) AG 187509-187622 GT GGG (AGG) AG 187647-187688 GT GGG (AGG) AG 187714-187815 GT GGG (GGT) AG 187847-187873 GT CTG (GAG) AG 187905-187922 GT AGG (AGA) AG 187954-187965 GT TGG (GAG) AG 187990-188010 GT AAG (GAC) AG 188072-188226 GT GTG (CTG) AG 188422-188618 GT AGG (GGT) AG 189026-189154 GT GAG (ACC) AG 189175-189294 GT CGG (CAG) AG 191756-191923 TG GAT -recovered GeneMark_model.57429_t, terminal, 191756, 191923 -recovered GeneMark_model.57429_t, internal, 187310, 187317 -recovered GeneMark_model.57429_t, internal, 187357, 187485 -recovered GeneMark_model.57429_t, internal, 187509, 187622 -recovered GeneMark_model.57429_t, internal, 187647, 187688 -recovered GeneMark_model.57429_t, internal, 187714, 187815 -recovered GeneMark_model.57429_t, internal, 187847, 187873 -recovered GeneMark_model.57429_t, internal, 187905, 187922 -recovered GeneMark_model.57429_t, internal, 187954, 187965 -recovered GeneMark_model.57429_t, internal, 187990, 188010 -recovered GeneMark_model.57429_t, internal, 188072, 188226 -recovered GeneMark_model.57429_t, internal, 188422, 188618 -recovered GeneMark_model.57429_t, internal, 189026, 189154 -recovered GeneMark_model.57429_t, internal, 189175, 189294 Valid prediction for GlimmerHMM_glimmerT_33505-T1 Valid prediction for snap_scaffold_13-snap.2773-T1 Valid prediction for GeneMark_model.57441_t Valid prediction for Augustus_model.g22515.t1 Valid prediction for snap_scaffold_13-snap.2777-T1 Valid prediction for snap_scaffold_13-snap.2783-T1 Sorry, intron length (3) is less than minimum required (10) Valid prediction for snap_scaffold_13-snap.2776-T1 Valid prediction for snap_scaffold_13-snap.2758-T1 Sorry, intron length (6) is less than minimum required (10) Couldn't classify 60041, 60206 Sorry, prediction GeneMark_model.57460_t fails validation. (CTT) AG 60041-60206 GT AGG (GAG) AG 60636-60739 GT AAG (GCT) AG 61947-62028 TG AGT -recovered GeneMark_model.57460_t, terminal, 61947, 62028 -recovered GeneMark_model.57460_t, internal, 60041, 60206 -recovered GeneMark_model.57460_t, internal, 60636, 60739 Valid prediction for pasa_asmbl_10163.p1 Valid prediction for GlimmerHMM_glimmerT_33533-T1 Valid prediction for GeneMark_model.57420_t Valid prediction for GlimmerHMM_glimmerT_33540-T1 Valid prediction for GeneMark_model.57443_t Valid prediction for Augustus_model.g22504.t1 Valid prediction for GeneMark_model.57411_t Valid prediction for GeneMark_model.57404_t -loading the search evidence (protein and EST search results, strand: -) -scoring exons (strand: -)Error with prediction: snap lend_intergenic: 12332, rend_intergenic: 8389 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 25222, rend_intergenic: 14529 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 25938, rend_intergenic: 25322 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 35714, rend_intergenic: 26216 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 64246, rend_intergenic: 50560 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 82728, rend_intergenic: 67412 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 88223, rend_intergenic: 82757 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 94013, rend_intergenic: 90551 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 102621, rend_intergenic: 94350 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 107114, rend_intergenic: 103848 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 127201, rend_intergenic: 111250 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 148695, rend_intergenic: 128731 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 156601, rend_intergenic: 152286 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 181553, rend_intergenic: 177308 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 183878, rend_intergenic: 182212 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 204121, rend_intergenic: 195208 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 219943, rend_intergenic: 208924 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 229875, rend_intergenic: 221722 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 234084, rend_intergenic: 229984 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 240122, rend_intergenic: 234583 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 246610, rend_intergenic: 241164 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 253960, rend_intergenic: 249250 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -building DP trellis -building trellis in range 1 - 256013 -exon list size: 1180 building trellis 0.1 0.2 0.3 0.3 0.4 0.5 0.6 0.7 0.8 0.8 0.9 1.0 1.1 1.2 1.3 1.4 1.4 1.5 1.6 1.7 1.8 1.9 1.9 2.0 2.1 2.2 2.3 2.4 2.5 2.5 2.6 2.7 2.8 2.9 3.0 3.0 3.1 3.2 3.3 3.4 3.5 3.6 3.6 3.7 3.8 3.9 4.0 4.1 4.1 4.2 4.3 4.4 4.5 4.6 4.7 4.7 4.8 4.9 5.0 5.1 5.2 5.2 5.3 5.4 5.5 5.6 5.7 5.8 5.8 5.9 6.0 6.1 6.2 6.3 6.3 6.4 6.5 6.6 6.7 6.8 6.9 6.9 7.0 7.1 7.2 7.3 7.4 7.4 7.5 7.6 7.7 7.8 7.9 8.0 8.0 8.1 8.2 8.3 8.4 8.5 8.5 8.6 8.7 8.8 8.9 9.0 9.1 9.1 9.2 9.3 9.4 9.5 9.6 9.6 9.7 9.8 9.9 10.0 10.1 10.2 10.2 10.3 10.4 10.5 10.6 10.7 10.7 10.8 10.9 11.0 11.1 11.2 11.3 11.3 11.4 11.5 11.6 11.7 11.8 11.8 11.9 12.0 12.1 12.2 12.3 12.4 12.4 12.5 12.6 12.7 12.8 12.9 12.9 13.0 13.1 13.2 13.3 13.4 13.5 13.5 13.6 13.7 13.8 13.9 14.0 14.0 14.1 14.2 14.3 14.4 14.5 14.6 14.6 14.7 14.8 14.9 15.0 15.1 15.1 15.2 15.3 15.4 15.5 15.6 15.7 15.7 15.8 15.9 16.0 16.1 16.2 16.2 16.3 16.4 16.5 16.6 16.7 16.8 16.8 16.9 17.0 17.1 17.2 17.3 17.3 17.4 17.5 17.6 17.7 17.8 17.9 17.9 18.0 18.1 18.2 18.3 18.4 18.4 18.5 18.6 18.7 18.8 18.9 19.0 19.0 19.1 19.2 19.3 19.4 19.5 19.5 19.6 19.7 19.8 19.9 20.0 20.1 20.1 20.2 20.3 20.4 20.5 20.6 20.6 20.7 20.8 20.9 21.0 21.1 21.2 21.2 21.3 21.4 21.5 21.6 21.7 21.7 21.8 21.9 22.0 22.1 22.2 22.3 22.3 22.4 22.5 22.6 22.7 22.8 22.8 22.9 23.0 23.1 23.2 23.3 23.4 23.4 23.5 23.6 23.7 23.8 23.9 23.9 24.0 24.1 24.2 24.3 24.4 24.5 24.5 24.6 24.7 24.8 24.9 25.0 25.0 25.1 25.2 25.3 25.4 25.5 25.5 25.6 25.7 25.8 25.9 26.0 26.1 26.1 26.2 26.3 26.4 26.5 26.6 26.6 26.7 26.8 26.9 27.0 27.1 27.2 27.2 27.3 27.4 27.5 27.6 27.7 27.7 27.8 27.9 28.0 28.1 28.2 28.3 28.3 28.4 28.5 28.6 28.7 28.8 28.8 28.9 29.0 29.1 29.2 29.3 29.4 29.4 29.5 29.6 29.7 29.8 29.9 29.9 30.0 30.1 30.2 30.3 30.4 30.5 30.5 30.6 30.7 30.8 30.9 31.0 31.0 31.1 31.2 31.3 31.4 31.5 31.6 31.6 31.7 31.8 31.9 32.0 32.1 32.1 32.2 32.3 32.4 32.5 32.6 32.7 32.7 32.8 32.9 33.0 33.1 33.2 33.2 33.3 33.4 33.5 33.6 33.7 33.8 33.8 33.9 34.0 34.1 34.2 34.3 34.3 34.4 34.5 34.6 34.7 34.8 34.9 34.9 35.0 35.1 35.2 35.3 35.4 35.4 35.5 35.6 35.7 35.8 35.9 36.0 36.0 36.1 36.2 36.3 36.4 36.5 36.5 36.6 36.7 36.8 36.9 37.0 37.1 37.1 37.2 37.3 37.4 37.5 37.6 37.6 37.7 37.8 37.9 38.0 38.1 38.2 38.2 38.3 38.4 38.5 38.6 38.7 38.7 38.8 38.9 39.0 39.1 39.2 39.3 39.3 39.4 39.5 39.6 39.7 39.8 39.8 39.9 40.0 40.1 40.2 40.3 40.4 40.4 40.5 40.6 40.7 40.8 40.9 40.9 41.0 41.1 41.2 41.3 41.4 41.5 41.5 41.6 41.7 41.8 41.9 42.0 42.0 42.1 42.2 42.3 42.4 42.5 42.6 42.6 42.7 42.8 42.9 43.0 43.1 43.1 43.2 43.3 43.4 43.5 43.6 43.7 43.7 43.8 43.9 44.0 44.1 44.2 44.2 44.3 44.4 44.5 44.6 44.7 44.8 44.8 44.9 45.0 45.1 45.2 45.3 45.3 45.4 45.5 45.6 45.7 45.8 45.9 45.9 46.0 46.1 46.2 46.3 46.4 46.4 46.5 46.6 46.7 46.8 46.9 47.0 47.0 47.1 47.2 47.3 47.4 47.5 47.5 47.6 47.7 47.8 47.9 48.0 48.1 48.1 48.2 48.3 48.4 48.5 48.6 48.6 48.7 48.8 48.9 49.0 49.1 49.2 49.2 49.3 49.4 49.5 49.6 49.7 49.7 49.8 49.9 50.0 50.1 50.2 50.3 50.3 50.4 50.5 50.6 50.7 50.8 50.8 50.9 51.0 51.1 51.2 51.3 51.4 51.4 51.5 51.6 51.7 51.8 51.9 51.9 52.0 52.1 52.2 52.3 52.4 52.5 52.5 52.6 52.7 52.8 52.9 53.0 53.0 53.1 53.2 53.3 53.4 53.5 53.6 53.6 53.7 53.8 53.9 54.0 54.1 54.1 54.2 54.3 54.4 54.5 54.6 54.7 54.7 54.8 54.9 55.0 55.1 55.2 55.2 55.3 55.4 55.5 55.6 55.7 55.8 55.8 55.9 56.0 56.1 56.2 56.3 56.3 56.4 56.5 56.6 56.7 56.8 56.9 56.9 57.0 57.1 57.2 57.3 57.4 57.4 57.5 57.6 57.7 57.8 57.9 58.0 58.0 58.1 58.2 58.3 58.4 58.5 58.5 58.6 58.7 58.8 58.9 59.0 59.1 59.1 59.2 59.3 59.4 59.5 59.6 59.6 59.7 59.8 59.9 60.0 60.1 60.2 60.2 60.3 60.4 60.5 60.6 60.7 60.7 60.8 60.9 61.0 61.1 61.2 61.3 61.3 61.4 61.5 61.6 61.7 61.8 61.8 61.9 62.0 62.1 62.2 62.3 62.4 62.4 62.5 62.6 62.7 62.8 62.9 62.9 63.0 63.1 63.2 63.3 63.4 63.5 63.5 63.6 63.7 63.8 63.9 64.0 64.0 64.1 64.2 64.3 64.4 64.5 64.6 64.6 64.7 64.8 64.9 65.0 65.1 65.1 65.2 65.3 65.4 65.5 65.6 65.7 65.7 65.8 65.9 66.0 66.1 66.2 66.2 66.3 66.4 66.5 66.6 66.7 66.8 66.8 66.9 67.0 67.1 67.2 67.3 67.3 67.4 67.5 67.6 67.7 67.8 67.9 67.9 68.0 68.1 68.2 68.3 68.4 68.4 68.5 68.6 68.7 68.8 68.9 69.0 69.0 69.1 69.2 69.3 69.4 69.5 69.5 69.6 69.7 69.8 69.9 70.0 70.1 70.1 70.2 70.3 70.4 70.5 70.6 70.6 70.7 70.8 70.9 71.0 71.1 71.2 71.2 71.3 71.4 71.5 71.6 71.7 71.7 71.8 71.9 72.0 72.1 72.2 72.3 72.3 72.4 72.5 72.6 72.7 72.8 72.8 72.9 73.0 73.1 73.2 73.3 73.4 73.4 73.5 73.6 73.7 73.8 73.9 73.9 74.0 74.1 74.2 74.3 74.4 74.5 74.5 74.6 74.7 74.8 74.9 75.0 75.0 75.1 75.2 75.3 75.4 75.5 75.5 75.6 75.7 75.8 75.9 76.0 76.1 76.1 76.2 76.3 76.4 76.5 76.6 76.6 76.7 76.8 76.9 77.0 77.1 77.2 77.2 77.3 77.4 77.5 77.6 77.7 77.7 77.8 77.9 78.0 78.1 78.2 78.3 78.3 78.4 78.5 78.6 78.7 78.8 78.8 78.9 79.0 79.1 79.2 79.3 79.4 79.4 79.5 79.6 79.7 79.8 79.9 79.9 80.0 80.1 80.2 80.3 80.4 80.5 80.5 80.6 80.7 80.8 80.9 81.0 81.0 81.1 81.2 81.3 81.4 81.5 81.6 81.6 81.7 81.8 81.9 82.0 82.1 82.1 82.2 82.3 82.4 82.5 82.6 82.7 82.7 82.8 82.9 83.0 83.1 83.2 83.2 83.3 83.4 83.5 83.6 83.7 83.8 83.8 83.9 84.0 84.1 84.2 84.3 84.3 84.4 84.5 84.6 84.7 84.8 84.9 84.9 85.0 85.1 85.2 85.3 85.4 85.4 85.5 85.6 85.7 85.8 85.9 86.0 86.0 86.1 86.2 86.3 86.4 86.5 86.5 86.6 86.7 86.8 86.9 87.0 87.1 87.1 87.2 87.3 87.4 87.5 87.6 87.6 87.7 87.8 87.9 88.0 88.1 88.2 88.2 88.3 88.4 88.5 88.6 88.7 88.7 88.8 88.9 89.0 89.1 89.2 89.3 89.3 89.4 89.5 89.6 89.7 89.8 89.8 89.9 90.0 90.1 90.2 90.3 90.4 90.4 90.5 90.6 90.7 90.8 90.9 90.9 91.0 91.1 91.2 91.3 91.4 91.5 91.5 91.6 91.7 91.8 91.9 92.0 92.0 92.1 92.2 92.3 92.4 92.5 92.6 92.6 92.7 92.8 92.9 93.0 93.1 93.1 93.2 93.3 93.4 93.5 93.6 93.7 93.7 93.8 93.9 94.0 94.1 94.2 94.2 94.3 94.4 94.5 94.6 94.7 94.8 94.8 94.9 95.0 95.1 95.2 95.3 95.3 95.4 95.5 95.6 95.7 95.8 95.9 95.9 96.0 96.1 96.2 96.3 96.4 96.4 96.5 96.6 96.7 96.8 96.9 97.0 97.0 97.1 97.2 97.3 97.4 97.5 97.5 97.6 97.7 97.8 97.9 98.0 98.1 98.1 98.2 98.3 98.4 98.5 98.6 98.6 98.7 98.8 98.9 99.0 99.1 99.2 99.2 99.3 99.4 99.5 99.6 99.7 99.7 99.8 99.9 -found 43 predictions from path traversal Error with prediction: snap lend_intergenic: 12332, rend_intergenic: 8389 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 25222, rend_intergenic: 14529 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 25938, rend_intergenic: 25322 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 35714, rend_intergenic: 26216 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 64246, rend_intergenic: 50560 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 82728, rend_intergenic: 67412 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 88223, rend_intergenic: 82757 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 94013, rend_intergenic: 90551 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 102621, rend_intergenic: 94350 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 107114, rend_intergenic: 103848 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 127201, rend_intergenic: 111250 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 148695, rend_intergenic: 128731 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 156601, rend_intergenic: 152286 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 181553, rend_intergenic: 177308 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 183878, rend_intergenic: 182212 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 204121, rend_intergenic: 195208 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 219943, rend_intergenic: 208924 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 229875, rend_intergenic: 221722 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 234084, rend_intergenic: 229984 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 240122, rend_intergenic: 234583 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 246610, rend_intergenic: 241164 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 253960, rend_intergenic: 249250 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -reporting highest scoring path thru the trellis. -found 29 predictions persist after filtering for low support