-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_13/scaffold_13_14040384-14228678

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for GeneMark_model.57324_t
Valid prediction for GlimmerHMM_glimmerT_33449-T1
Valid prediction for GeneMark_model.57295_t
Valid prediction for GeneMark_model.57336_t
Valid prediction for CodingQuarry_transcript_13269-T1
Valid prediction for snap_scaffold_13-snap.2712-T1
Valid prediction for GlimmerHMM_glimmerT_33467-T1
Valid prediction for GeneMark_model.57334_t
Valid prediction for GlimmerHMM_glimmerT_33459-T1
Valid prediction for snap_scaffold_13-snap.2698-T1
Valid prediction for GeneMark_model.57293_t
Valid prediction for snap_scaffold_13-snap.2687-T1
Valid prediction for snap_scaffold_13-snap.2676-T1
Valid prediction for GeneMark_model.57315_t
Valid prediction for GlimmerHMM_glimmerT_33469-T1
Valid prediction for CodingQuarry_transcript_13262-T1
Valid prediction for GlimmerHMM_glimmerT_33472-T1
Valid prediction for GeneMark_model.57316_t
Valid prediction for snap_scaffold_13-snap.2682-T1
Valid prediction for GeneMark_model.57308_t
Couldn't classify 134106, 134276
Couldn't classify 134476, 134480
Sorry, prediction CodingQuarry_transcript_13270-T1 fails validation.
(ATG)	 AA	133180-133279	GT	AGG
(TTG)	 AG	133386-133492	GT	AAG
(ACT)	 AG	133787-133943	GT	AGG
(GTG)	 AG	134106-134276	GG	TAG
(GTT)	 AT	134476-134480	GG	AGG
-recovered CodingQuarry_transcript_13270-T1, initial, 133180, 133279
-recovered CodingQuarry_transcript_13270-T1, internal, 133386, 133492
-recovered CodingQuarry_transcript_13270-T1, internal, 133787, 133943
Valid prediction for GeneMark_model.57330_t
Valid prediction for GlimmerHMM_glimmerT_33468-T1
Valid prediction for GeneMark_model.57313_t
Valid prediction for GeneMark_model.57340_t
Valid prediction for GeneMark_model.57311_t
Valid prediction for GeneMark_model.57325_t
Valid prediction for CodingQuarry_transcript_13263-T1
Valid prediction for snap_scaffold_13-snap.2699-T1
Valid prediction for GeneMark_model.57329_t
Valid prediction for snap_scaffold_13-snap.2696-T1
Valid prediction for GeneMark_model.57339_t
Valid prediction for GlimmerHMM_glimmerT_33474-T1
Valid prediction for GlimmerHMM_glimmerT_33457-T1
Valid prediction for Augustus_model.g22474.t1
Valid prediction for Augustus_model.g22467.t1
Valid prediction for GeneMark_model.57303_t
Valid prediction for snap_scaffold_13-snap.2710-T1
Valid prediction for Augustus_model.g22462.t1
Valid prediction for GeneMark_model.57309_t
Valid prediction for GeneMark_model.57327_t
Valid prediction for HiQ_model.g22475.t1
Valid prediction for snap_scaffold_13-snap.2674-T1
Valid prediction for snap_scaffold_13-snap.2704-T1
Valid prediction for GlimmerHMM_glimmerT_33464-T1
Valid prediction for CodingQuarry_transcript_13267-T1
Valid prediction for GeneMark_model.57344_t
Valid prediction for snap_scaffold_13-snap.2681-T1
Valid prediction for snap_scaffold_13-snap.2671-T1
Valid prediction for GeneMark_model.57300_t
Valid prediction for GeneMark_model.57307_t
Valid prediction for GlimmerHMM_glimmerT_33450-T1
Valid prediction for snap_scaffold_13-snap.2709-T1
Valid prediction for GeneMark_model.57323_t
Valid prediction for snap_scaffold_13-snap.2713-T1
Valid prediction for pasa_asmbl_11414.p1
Valid prediction for GeneMark_model.57335_t
Valid prediction for snap_scaffold_13-snap.2707-T1
Valid prediction for GeneMark_model.57297_t
Valid prediction for GeneMark_model.57302_t
Valid prediction for Augustus_model.g22477.t1
Valid prediction for snap_scaffold_13-snap.2718-T1
Valid prediction for snap_scaffold_13-snap.2705-T1
Valid prediction for Augustus_model.g22471.t1
Valid prediction for GeneMark_model.57332_t
Valid prediction for GlimmerHMM_glimmerT_33479-T1
Valid prediction for snap_scaffold_13-snap.2678-T1
Valid prediction for GlimmerHMM_glimmerT_33460-T1
Valid prediction for snap_scaffold_13-snap.2684-T1
Valid prediction for snap_scaffold_13-snap.2714-T1
Valid prediction for CodingQuarry_transcript_13264-T1
Valid prediction for snap_scaffold_13-snap.2693-T1
Valid prediction for GeneMark_model.57298_t
Valid prediction for GeneMark_model.57321_t
Valid prediction for pasa_asmbl_11403.p1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for Augustus_model.g22472.t1
Valid prediction for Augustus_model.g22473.t1
Valid prediction for CodingQuarry_transcript_13261-T1
Valid prediction for Augustus_model.g22483.t1
Valid prediction for Augustus_model.g22481.t1
Valid prediction for Augustus_model.g22463.t1
Valid prediction for GlimmerHMM_glimmerT_33456-T1
Valid prediction for snap_scaffold_13-snap.2702-T1
Valid prediction for GeneMark_model.57299_t
Valid prediction for snap_scaffold_13-snap.2703-T1
Valid prediction for GlimmerHMM_glimmerT_33475-T1
Valid prediction for GeneMark_model.57331_t
Valid prediction for GlimmerHMM_glimmerT_33471-T1
Valid prediction for GeneMark_model.57328_t
Valid prediction for snap_scaffold_13-snap.2679-T1
Valid prediction for GeneMark_model.57345_t
Valid prediction for GlimmerHMM_glimmerT_33476-T1
Valid prediction for GlimmerHMM_glimmerT_33461-T1
Couldn't classify 2087, 2179
Sorry, prediction pasa_asmbl_10145.p1 fails validation.
(ATG)	 GA	559-792	GT	CGG
(TGG)	 AG	1040-1057	GT	AAG
(ATT)	 AG	1244-1309	GT	AGG
(AAC)	 AG	1731-1826	GT	CGG
(CAA)	 AG	2087-2179	AG	CCA
-recovered pasa_asmbl_10145.p1, initial, 559, 792
-recovered pasa_asmbl_10145.p1, internal, 1040, 1057
-recovered pasa_asmbl_10145.p1, internal, 1244, 1309
-recovered pasa_asmbl_10145.p1, internal, 1731, 1826
Valid prediction for snap_scaffold_13-snap.2717-T1
Valid prediction for snap_scaffold_13-snap.2685-T1
Valid prediction for Augustus_model.g22470.t1
Valid prediction for CodingQuarry_transcript_13266-T1
Valid prediction for GeneMark_model.57310_t
Valid prediction for GlimmerHMM_glimmerT_33463-T1
Couldn't classify 41688, 41832
Sorry, prediction pasa_asmbl_10142.p1 fails validation.
(AGT)	 GA	41688-41832	GT	GGG
(GTT)	 AG	42354-42432	GT	AGG
(ACG)	 AG	42602-42673	GT	AGG
(AAC)	 AG	43194-43263	GT	AGG
(GTG)	 AG	43804-43923	CC	AGC
-recovered pasa_asmbl_10142.p1, terminal, 43804, 43923
-recovered pasa_asmbl_10142.p1, internal, 42354, 42432
-recovered pasa_asmbl_10142.p1, internal, 42602, 42673
-recovered pasa_asmbl_10142.p1, internal, 43194, 43263
Valid prediction for snap_scaffold_13-snap.2701-T1
Valid prediction for snap_scaffold_13-snap.2673-T1
Valid prediction for snap_scaffold_13-snap.2677-T1
Valid prediction for GeneMark_model.57333_t
Valid prediction for snap_scaffold_13-snap.2692-T1
Couldn't classify 47888, 48062
Sorry, prediction pasa_asmbl_10140.p1 fails validation.
(CAT)	 TT	47888-48062	GT	CGG
(GCT)	 AG	48645-48844	AA	AGA
-recovered pasa_asmbl_10140.p1, terminal, 48645, 48844
Valid prediction for GlimmerHMM_glimmerT_33454-T1
Valid prediction for Augustus_model.g22468.t1
Valid prediction for GeneMark_model.57322_t
Valid prediction for GlimmerHMM_glimmerT_33455-T1
Valid prediction for GlimmerHMM_glimmerT_33473-T1
Valid prediction for GeneMark_model.57296_t
Valid prediction for GeneMark_model.57312_t
Valid prediction for GlimmerHMM_glimmerT_33458-T1
Valid prediction for snap_scaffold_13-snap.2686-T1
Sorry, intron length (4) is less than minimum required (10)
Valid prediction for snap_scaffold_13-snap.2700-T1
Valid prediction for GeneMark_model.57320_t
Valid prediction for CodingQuarry_transcript_13268-T1
Valid prediction for snap_scaffold_13-snap.2715-T1
Valid prediction for Augustus_model.g22466.t1
Valid prediction for GlimmerHMM_glimmerT_33478-T1
Valid prediction for snap_scaffold_13-snap.2675-T1
Valid prediction for CodingQuarry_transcript_13272-T1
Valid prediction for snap_scaffold_13-snap.2716-T1
Valid prediction for GeneMark_model.57343_t
Valid prediction for GlimmerHMM_glimmerT_33470-T1
Valid prediction for snap_scaffold_13-snap.2688-T1
Valid prediction for Augustus_model.g22476.t1
Valid prediction for GeneMark_model.57306_t
Valid prediction for GlimmerHMM_glimmerT_33462-T1
Couldn't classify 6827, 6913
Couldn't classify 10319, 10446
Sorry, prediction pasa_asmbl_10303.p1 fails validation.
(CAG)	 CT	6827-6913	GT	AGG
(CTC)	 AG	7309-7358	GT	AGG
(CTC)	 AG	8547-8624	GT	AAG
(GAG)	 AG	8876-8987	GT	GGG
(GAG)	 AG	9742-9832	GT	GGG
(ACC)	 AG	10319-10446	GT	GTG
-recovered pasa_asmbl_10303.p1, internal, 7309, 7358
-recovered pasa_asmbl_10303.p1, internal, 8547, 8624
-recovered pasa_asmbl_10303.p1, internal, 8876, 8987
-recovered pasa_asmbl_10303.p1, internal, 9742, 9832
-recovered pasa_asmbl_10303.p1, internal, 10319, 10446
Valid prediction for snap_scaffold_13-snap.2719-T1
Valid prediction for snap_scaffold_13-snap.2683-T1
Valid prediction for snap_scaffold_13-snap.2695-T1
Valid prediction for snap_scaffold_13-snap.2711-T1
Valid prediction for snap_scaffold_13-snap.2690-T1
Valid prediction for Augustus_model.g22478.t1
Valid prediction for GlimmerHMM_glimmerT_33477-T1
Valid prediction for GeneMark_model.57305_t
Valid prediction for GlimmerHMM_glimmerT_33466-T1
Valid prediction for snap_scaffold_13-snap.2697-T1
Valid prediction for Augustus_model.g22465.t1
Couldn't classify 130772, 130821
Sorry, prediction pasa_asmbl_10397.p1 fails validation.
(GTC)	 AT	130772-130821	GT	GGG
(GAT)	 AG	130926-130994	GT	TGG
(GGG)	 AG	131775-131844	GT	AGG
(TTA)	 AG	132173-132266	GT	GGG
(GCT)	 AG	132552-132667	GT	AGG
(CAC)	 AG	133041-133214	AC	AGA
-recovered pasa_asmbl_10397.p1, terminal, 133041, 133214
-recovered pasa_asmbl_10397.p1, internal, 130926, 130994
-recovered pasa_asmbl_10397.p1, internal, 131775, 131844
-recovered pasa_asmbl_10397.p1, internal, 132173, 132266
-recovered pasa_asmbl_10397.p1, internal, 132552, 132667
Valid prediction for snap_scaffold_13-snap.2694-T1
Valid prediction for GeneMark_model.57319_t
Valid prediction for snap_scaffold_13-snap.2672-T1
Valid prediction for GlimmerHMM_glimmerT_33465-T1
Valid prediction for GeneMark_model.57301_t
Valid prediction for Augustus_model.g22482.t1
Valid prediction for GeneMark_model.57341_t
Couldn't classify 66113, 66257
Sorry, prediction pasa_asmbl_10138.p1 fails validation.
(TGT)	 AG	66113-66257	GT	TGG
(CAA)	 AG	66656-66848	GT	GGG
(GTG)	 AG	67058-67202	GT	CGG
(ATG)	 AG	67635-67710	GT	ACG
(GGA)	 AG	67975-68051	CT	GAC
-recovered pasa_asmbl_10138.p1, initial, 67635, 67710
-recovered pasa_asmbl_10138.p1, terminal, 67975, 68051
-recovered pasa_asmbl_10138.p1, internal, 66113, 66257
-recovered pasa_asmbl_10138.p1, internal, 66656, 66848
-recovered pasa_asmbl_10138.p1, internal, 67058, 67202
-recovered pasa_asmbl_10138.p1, internal, 67635, 67710
Couldn't classify 103924, 104101
Couldn't classify 105038, 105127
Sorry, prediction pasa_asmbl_10351.p1 fails validation.
(CAG)	 AG	103924-104101	GT	CGG
(AGT)	 AG	104313-104461	GT	GCG
(GTG)	 AG	104652-104882	GT	CTG
(GGC)	 AG	105038-105127	CG	ACC
-recovered pasa_asmbl_10351.p1, internal, 103924, 104101
-recovered pasa_asmbl_10351.p1, internal, 104313, 104461
-recovered pasa_asmbl_10351.p1, internal, 104652, 104882
Valid prediction for snap_scaffold_13-snap.2708-T1
Valid prediction for snap_scaffold_13-snap.2680-T1
Valid prediction for GlimmerHMM_glimmerT_33453-T1
Valid prediction for GlimmerHMM_glimmerT_33452-T1
Valid prediction for snap_scaffold_13-snap.2706-T1
Valid prediction for GeneMark_model.57318_t
Valid prediction for snap_scaffold_13-snap.2691-T1
Valid prediction for Augustus_model.g22480.t1
Valid prediction for Augustus_model.g22469.t1
Valid prediction for GeneMark_model.57292_t
Valid prediction for GeneMark_model.57342_t
Valid prediction for Augustus_model.g22464.t1
Valid prediction for Augustus_model.g22479.t1
Valid prediction for GlimmerHMM_glimmerT_33480-T1
Valid prediction for GlimmerHMM_glimmerT_33451-T1
Valid prediction for GeneMark_model.57326_t
Valid prediction for snap_scaffold_13-snap.2689-T1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 34954, rend_intergenic: 32455  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 36964, rend_intergenic: 35817  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 40262, rend_intergenic: 39866  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 41926, rend_intergenic: 41631  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 52557, rend_intergenic: 49554  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 57764, rend_intergenic: 55082  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 67278, rend_intergenic: 61446  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 80177, rend_intergenic: 72282  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 87977, rend_intergenic: 84785  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 95838, rend_intergenic: 95725  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 101246, rend_intergenic: 96849  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 111743, rend_intergenic: 108846  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 119145, rend_intergenic: 112623  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 131588, rend_intergenic: 125891  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 142360, rend_intergenic: 140271  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 143825, rend_intergenic: 142438  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 146557, rend_intergenic: 144262  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 151782, rend_intergenic: 148800  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 167949, rend_intergenic: 152206  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 180078, rend_intergenic: 176463  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 186213, rend_intergenic: 180934  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 188295
-exon list size: 746


building trellis

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49.3    
49.5    
49.6    
49.7    
49.9    
50.0    
50.1    
50.3    
50.4    
50.5    
50.7    
50.8    
50.9    
51.1    
51.2    
51.3    
51.5    
51.6    
51.7    
51.9    
52.0    
52.1    
52.3    
52.4    
52.5    
52.7    
52.8    
52.9    
53.1    
53.2    
53.3    
53.5    
53.6    
53.7    
53.9    
54.0    
54.1    
54.3    
54.4    
54.5    
54.7    
54.8    
54.9    
55.1    
55.2    
55.3    
55.5    
55.6    
55.7    
55.9    
56.0    
56.1    
56.3    
56.4    
56.6    
56.7    
56.8    
57.0    
57.1    
57.2    
57.4    
57.5    
57.6    
57.8    
57.9    
58.0    
58.2    
58.3    
58.4    
58.6    
58.7    
58.8    
59.0    
59.1    
59.2    
59.4    
59.5    
59.6    
59.8    
59.9    
60.0    
60.2    
60.3    
60.4    
60.6    
60.7    
60.8    
61.0    
61.1    
61.2    
61.4    
61.5    
61.6    
61.8    
61.9    
62.0    
62.2    
62.3    
62.4    
62.6    
62.7    
62.8    
63.0    
63.1    
63.2    
63.4    
63.5    
63.6    
63.8    
63.9    
64.0    
64.2    
64.3    
64.4    
64.6    
64.7    
64.8    
65.0    
65.1    
65.2    
65.4    
65.5    
65.6    
65.8    
65.9    
66.0    
66.2    
66.3    
66.4    
66.6    
66.7    
66.8    
67.0    
67.1    
67.2    
67.4    
67.5    
67.6    
67.8    
67.9    
68.0    
68.2    
68.3    
68.4    
68.6    
68.7    
68.9    
69.0    
69.1    
69.3    
69.4    
69.5    
69.7    
69.8    
69.9    
70.1    
70.2    
70.3    
70.5    
70.6    
70.7    
70.9    
71.0    
71.1    
71.3    
71.4    
71.5    
71.7    
71.8    
71.9    
72.1    
72.2    
72.3    
72.5    
72.6    
72.7    
72.9    
73.0    
73.1    
73.3    
73.4    
73.5    
73.7    
73.8    
73.9    
74.1    
74.2    
74.3    
74.5    
74.6    
74.7    
74.9    
75.0    
75.1    
75.3    
75.4    
75.5    
75.7    
75.8    
75.9    
76.1    
76.2    
76.3    
76.5    
76.6    
76.7    
76.9    
77.0    
77.1    
77.3    
77.4    
77.5    
77.7    
77.8    
77.9    
78.1    
78.2    
78.3    
78.5    
78.6    
78.7    
78.9    
79.0    
79.1    
79.3    
79.4    
79.5    
79.7    
79.8    
79.9    
80.1    
80.2    
80.3    
80.5    
80.6    
80.7    
80.9    
81.0    
81.1    
81.3    
81.4    
81.6    
81.7    
81.8    
82.0    
82.1    
82.2    
82.4    
82.5    
82.6    
82.8    
82.9    
83.0    
83.2    
83.3    
83.4    
83.6    
83.7    
83.8    
84.0    
84.1    
84.2    
84.4    
84.5    
84.6    
84.8    
84.9    
85.0    
85.2    
85.3    
85.4    
85.6    
85.7    
85.8    
86.0    
86.1    
86.2    
86.4    
86.5    
86.6    
86.8    
86.9    
87.0    
87.2    
87.3    
87.4    
87.6    
87.7    
87.8    
88.0    
88.1    
88.2    
88.4    
88.5    
88.6    
88.8    
88.9    
89.0    
89.2    
89.3    
89.4    
89.6    
89.7    
89.8    
90.0    
90.1    
90.2    
90.4    
90.5    
90.6    
90.8    
90.9    
91.0    
91.2    
91.3    
91.4    
91.6    
91.7    
91.8    
92.0    
92.1    
92.2    
92.4    
92.5    
92.6    
92.8    
92.9    
93.0    
93.2    
93.3    
93.4    
93.6    
93.7    
93.9    
94.0    
94.1    
94.3    
94.4    
94.5    
94.7    
94.8    
94.9    
95.1    
95.2    
95.3    
95.5    
95.6    
95.7    
95.9    
96.0    
96.1    
96.3    
96.4    
96.5    
96.7    
96.8    
96.9    
97.1    
97.2    
97.3    
97.5    
97.6    
97.7    
97.9    
98.0    
98.1    
98.3    
98.4    
98.5    
98.7    
98.8    
98.9    
99.1    
99.2    
99.3    
99.5    
99.6    
99.7    
99.9    
-found 39 predictions from path traversal
Error with prediction: snap lend_intergenic: 34954, rend_intergenic: 32455  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 36964, rend_intergenic: 35817  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 40262, rend_intergenic: 39866  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 41926, rend_intergenic: 41631  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 52557, rend_intergenic: 49554  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 57764, rend_intergenic: 55082  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 67278, rend_intergenic: 61446  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 80177, rend_intergenic: 72282  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 87977, rend_intergenic: 84785  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 95838, rend_intergenic: 95725  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 101246, rend_intergenic: 96849  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 111743, rend_intergenic: 108846  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 119145, rend_intergenic: 112623  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 131588, rend_intergenic: 125891  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 142360, rend_intergenic: 140271  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 143825, rend_intergenic: 142438  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 146557, rend_intergenic: 144262  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 151782, rend_intergenic: 148800  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 167949, rend_intergenic: 152206  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 180078, rend_intergenic: 176463  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 186213, rend_intergenic: 180934  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 26 predictions persist after filtering for low support