-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_13/scaffold_13_13835759-14042690

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for GlimmerHMM_glimmerT_33440-T1
Valid prediction for GeneMark_model.57279_t
Valid prediction for Augustus_model.g22457.t1
Valid prediction for Augustus_model.g22454.t1
Valid prediction for GlimmerHMM_glimmerT_33428-T1
Valid prediction for GeneMark_model.57262_t
Valid prediction for GlimmerHMM_glimmerT_33447-T1
Valid prediction for snap_scaffold_13-snap.2638-T1
Valid prediction for snap_scaffold_13-snap.2659-T1
Valid prediction for GeneMark_model.57232_t
Valid prediction for GeneMark_model.57239_t
Valid prediction for GeneMark_model.57289_t
Valid prediction for snap_scaffold_13-snap.2633-T1
Valid prediction for GeneMark_model.57221_t
Valid prediction for GlimmerHMM_glimmerT_33442-T1
Valid prediction for GeneMark_model.57267_t
Valid prediction for GeneMark_model.57227_t
Valid prediction for snap_scaffold_13-snap.2669-T1
Valid prediction for GlimmerHMM_glimmerT_33429-T1
Valid prediction for snap_scaffold_13-snap.2647-T1
Couldn't classify 138169, 138169
Sorry, prediction pasa_asmbl_11397.p1 fails validation.
(AGT)	 GC	138169-138169	GT	CAG
(TGT)	 AG	138731-138865	GT	TGG
(AGG)	 AG	139121-139215	GT	AGG
(CTA)	 AG	139358-139711	GA	GAG
-recovered pasa_asmbl_11397.p1, terminal, 139358, 139711
-recovered pasa_asmbl_11397.p1, internal, 138731, 138865
-recovered pasa_asmbl_11397.p1, internal, 139121, 139215
Valid prediction for snap_scaffold_13-snap.2648-T1
Valid prediction for GeneMark_model.57281_t
Valid prediction for GeneMark_model.57219_t
Valid prediction for GeneMark_model.57241_t
Valid prediction for GeneMark_model.57287_t
Valid prediction for GeneMark_model.57234_t
Valid prediction for snap_scaffold_13-snap.2642-T1
Valid prediction for GlimmerHMM_glimmerT_33436-T1
Valid prediction for snap_scaffold_13-snap.2656-T1
Valid prediction for GeneMark_model.57265_t
Valid prediction for GeneMark_model.57270_t
Valid prediction for snap_scaffold_13-snap.2643-T1
Couldn't classify 151979, 152027
Couldn't classify 153052, 153190
Sorry, prediction pasa_asmbl_11400.p1 fails validation.
(CAC)	 CT	151979-152027	GT	AGG
(CTG)	 AG	152401-152531	GT	GCG
(TAT)	 AG	152847-152929	GT	AGG
(CCA)	 AG	153052-153190	GC	TGG
-recovered pasa_asmbl_11400.p1, internal, 152401, 152531
-recovered pasa_asmbl_11400.p1, internal, 152847, 152929
-recovered pasa_asmbl_11400.p1, internal, 153052, 153190
Valid prediction for GeneMark_model.57277_t
Valid prediction for GeneMark_model.57225_t
Valid prediction for Augustus_model.g22448.t1
Valid prediction for GlimmerHMM_glimmerT_33443-T1
Valid prediction for snap_scaffold_13-snap.2662-T1
Valid prediction for GlimmerHMM_glimmerT_33430-T1
Valid prediction for snap_scaffold_13-snap.2640-T1
Sorry, intron length (3) is less than minimum required (10)
Valid prediction for GeneMark_model.57283_t
Valid prediction for snap_scaffold_13-snap.2666-T1
Couldn't classify 138096, 138165
Couldn't classify 138728, 138865
Sorry, prediction CodingQuarry_transcript_13257-T1 fails validation.
(ATG)	 GG	136153-136243	GT	CGG
(ATA)	 AG	137952-137980	GT	AGG
(GAG)	 AG	138096-138165	AG	AAA
(CAG)	 CC	138728-138865	GT	TGG
(AGG)	 AG	139121-139215	GT	AGG
(CTA)	 AG	139358-139711	GA	GAG
-recovered CodingQuarry_transcript_13257-T1, initial, 136153, 136243
-recovered CodingQuarry_transcript_13257-T1, terminal, 139358, 139711
-recovered CodingQuarry_transcript_13257-T1, internal, 137952, 137980
-recovered CodingQuarry_transcript_13257-T1, internal, 139121, 139215
Valid prediction for GeneMark_model.57223_t
Valid prediction for GeneMark_model.57248_t
Valid prediction for GeneMark_model.57243_t
Valid prediction for GeneMark_model.57250_t
Valid prediction for Augustus_model.g22458.t1
Valid prediction for snap_scaffold_13-snap.2630-T1
Valid prediction for GeneMark_model.57259_t
Valid prediction for snap_scaffold_13-snap.2629-T1
Valid prediction for GeneMark_model.57291_t
Valid prediction for Augustus_model.g22450.t1
Valid prediction for Augustus_model.g22456.t1
Valid prediction for GeneMark_model.57230_t
Valid prediction for GeneMark_model.57264_t
Couldn't classify 145371, 145410
Sorry, prediction pasa_asmbl_11399.p1 fails validation.
(ATG)	 AT	143960-144053	GT	TGG
(TTG)	 AG	144289-144356	GT	AGG
(CCT)	 AG	144460-144526	GT	TGG
(TCT)	 AG	144962-145052	GT	AGG
(TTA)	 AG	145371-145410	GA	CAG
-recovered pasa_asmbl_11399.p1, initial, 143960, 144053
-recovered pasa_asmbl_11399.p1, internal, 144289, 144356
-recovered pasa_asmbl_11399.p1, internal, 144460, 144526
-recovered pasa_asmbl_11399.p1, internal, 144962, 145052
Valid prediction for snap_scaffold_13-snap.2650-T1
Valid prediction for GlimmerHMM_glimmerT_33435-T1
Valid prediction for GeneMark_model.57256_t
Valid prediction for GeneMark_model.57286_t
Valid prediction for GlimmerHMM_glimmerT_33438-T1
Valid prediction for GeneMark_model.57236_t
Valid prediction for snap_scaffold_13-snap.2653-T1
Valid prediction for GeneMark_model.57246_t
Couldn't classify 146780, 147265
Sorry, prediction pasa_asmbl_11650.p3 fails validation.
(TCT)	 TT	146780-147265	AC	AAA
Valid prediction for CodingQuarry_transcript_13259-T1
Valid prediction for GeneMark_model.57253_t
Valid prediction for GeneMark_model.57275_t
Valid prediction for GeneMark_model.57290_t
add_exon() Sorry, GeneMark_model.57290_t 201879-202212-terminal-1 is invalid.
Valid prediction for snap_scaffold_13-snap.2657-T1
Sorry, intron length (9) is less than minimum required (10)
Valid prediction for GeneMark_model.57238_t
Valid prediction for GeneMark_model.57273_t
Valid prediction for GeneMark_model.57251_t
Valid prediction for snap_scaffold_13-snap.2635-T1
Valid prediction for snap_scaffold_13-snap.2645-T1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for snap_scaffold_13-snap.2652-T1
Valid prediction for GeneMark_model.57282_t
Valid prediction for snap_scaffold_13-snap.2631-T1
Valid prediction for snap_scaffold_13-snap.2649-T1
Valid prediction for snap_scaffold_13-snap.2663-T1
Valid prediction for GeneMark_model.57263_t
Valid prediction for GeneMark_model.57260_t
Valid prediction for GlimmerHMM_glimmerT_33445-T1
Valid prediction for GeneMark_model.57224_t
Valid prediction for GeneMark_model.57278_t
Valid prediction for GlimmerHMM_glimmerT_33431-T1
Valid prediction for snap_scaffold_13-snap.2628-T1
Valid prediction for GlimmerHMM_glimmerT_33432-T1
Valid prediction for GeneMark_model.57269_t
Valid prediction for GeneMark_model.57285_t
Valid prediction for Augustus_model.g22461.t1
Valid prediction for snap_scaffold_13-snap.2665-T1
Valid prediction for GeneMark_model.57237_t
Valid prediction for GeneMark_model.57261_t
Valid prediction for GeneMark_model.57228_t
Valid prediction for CodingQuarry_transcript_13258-T1
Valid prediction for GlimmerHMM_glimmerT_33433-T1
Valid prediction for GeneMark_model.57244_t
Valid prediction for snap_scaffold_13-snap.2667-T1
Valid prediction for GlimmerHMM_glimmerT_33441-T1
Valid prediction for Augustus_model.g22452.t1
Valid prediction for GlimmerHMM_glimmerT_33444-T1
Valid prediction for GeneMark_model.57235_t
Valid prediction for GeneMark_model.57255_t
Valid prediction for snap_scaffold_13-snap.2637-T1
Couldn't classify 82914, 83007
Sorry, prediction GeneMark_model.57258_t fails validation.
(ATG)	 GG	80279-80329	GT	TGG
(GTG)	 AG	80446-80557	GT	GGG
(GAG)	 AG	81886-81977	GT	AGG
(GTG)	 AG	82914-83007	GT	GGG
-recovered GeneMark_model.57258_t, initial, 80279, 80329
-recovered GeneMark_model.57258_t, internal, 80446, 80557
-recovered GeneMark_model.57258_t, internal, 81886, 81977
-recovered GeneMark_model.57258_t, internal, 82914, 83007
Couldn't classify 65647, 65775
Sorry, prediction pasa_asmbl_10131.p1 fails validation.
(ATG)	 AG	64176-64373	GT	AGG
(GGA)	 AG	64469-64515	GT	TTG
(AGC)	 AG	64681-64790	GT	AGG
(TGA)	 AG	65074-65123	GT	AGG
(ATT)	 AG	65328-65468	GT	AGG
(GTG)	 AG	65647-65775	CC	CTC
-recovered pasa_asmbl_10131.p1, initial, 64176, 64373
-recovered pasa_asmbl_10131.p1, internal, 64176, 64373
-recovered pasa_asmbl_10131.p1, internal, 64469, 64515
-recovered pasa_asmbl_10131.p1, internal, 64681, 64790
-recovered pasa_asmbl_10131.p1, internal, 65074, 65123
-recovered pasa_asmbl_10131.p1, internal, 65328, 65468
Valid prediction for GlimmerHMM_glimmerT_33434-T1
Valid prediction for snap_scaffold_13-snap.2654-T1
Valid prediction for pasa_asmbl_10133.p1
Valid prediction for GeneMark_model.57284_t
Valid prediction for GeneMark_model.57274_t
Valid prediction for Augustus_model.g22451.t1
Valid prediction for GeneMark_model.57222_t
Valid prediction for snap_scaffold_13-snap.2661-T1
Valid prediction for snap_scaffold_13-snap.2651-T1
Valid prediction for GeneMark_model.57226_t
Valid prediction for GeneMark_model.57254_t
Valid prediction for snap_scaffold_13-snap.2658-T1
Valid prediction for GlimmerHMM_glimmerT_33437-T1
Valid prediction for HiQ_model.g22460.t1
Valid prediction for GeneMark_model.57231_t
Valid prediction for Augustus_model.g22449.t1
Valid prediction for GeneMark_model.57266_t
Valid prediction for GeneMark_model.57229_t
Valid prediction for snap_scaffold_13-snap.2660-T1
Valid prediction for snap_scaffold_13-snap.2655-T1
Valid prediction for GlimmerHMM_glimmerT_33446-T1
Valid prediction for GeneMark_model.57242_t
Valid prediction for GeneMark_model.57288_t
Couldn't classify 89495, 89506
Sorry, prediction GeneMark_model.57257_t fails validation.
(GAG)	 AG	89495-89506	GT	GGG
(GGA)	 AG	89533-89556	GT	AGG
(AGA)	 AG	89602-89682	GT	GAG
(AGA)	 AG	91539-91688	GT	ACG
(AGG)	 AG	91794-91838	GT	GGG
(AGG)	 AG	91871-91921	GT	GAG
(AGA)	 AG	91961-91981	GT	GAG
(AGA)	 AG	92009-92063	AG	GAA
-recovered GeneMark_model.57257_t, terminal, 89533, 89556
-recovered GeneMark_model.57257_t, terminal, 92009, 92063
-recovered GeneMark_model.57257_t, internal, 89495, 89506
-recovered GeneMark_model.57257_t, internal, 89533, 89556
-recovered GeneMark_model.57257_t, internal, 89602, 89682
-recovered GeneMark_model.57257_t, internal, 91539, 91688
-recovered GeneMark_model.57257_t, internal, 91794, 91838
-recovered GeneMark_model.57257_t, internal, 91871, 91921
-recovered GeneMark_model.57257_t, internal, 91961, 91981
Valid prediction for snap_scaffold_13-snap.2670-T1
Valid prediction for snap_scaffold_13-snap.2632-T1
Valid prediction for Augustus_model.g22459.t1
Valid prediction for GlimmerHMM_glimmerT_33439-T1
Valid prediction for GeneMark_model.57220_t
Valid prediction for snap_scaffold_13-snap.2641-T1
Valid prediction for GeneMark_model.57272_t
Valid prediction for GeneMark_model.57280_t
Valid prediction for GeneMark_model.57276_t
Valid prediction for snap_scaffold_13-snap.2636-T1
Valid prediction for snap_scaffold_13-snap.2639-T1
Valid prediction for snap_scaffold_13-snap.2634-T1
Valid prediction for GeneMark_model.57233_t
Valid prediction for GeneMark_model.57240_t
Valid prediction for snap_scaffold_13-snap.2668-T1
Valid prediction for snap_scaffold_13-snap.2644-T1
Valid prediction for GeneMark_model.57249_t
Valid prediction for GeneMark_model.57252_t
Valid prediction for HiQ_model.g22455.t1
Valid prediction for GeneMark_model.57268_t
Valid prediction for GeneMark_model.57271_t
Valid prediction for snap_scaffold_13-snap.2664-T1
Couldn't classify 167898, 168701
Sorry, prediction pasa_asmbl_10129.p1 fails validation.
(TGT)	 TG	167898-168701	GT	AGG
(GTG)	 AG	169075-169653	AA	GAA
-recovered pasa_asmbl_10129.p1, terminal, 169075, 169653
Valid prediction for pasa_asmbl_10134.p1
Valid prediction for CodingQuarry_transcript_13260-T1
Valid prediction for GeneMark_model.57247_t
Valid prediction for Augustus_model.g22453.t1
Valid prediction for snap_scaffold_13-snap.2646-T1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 9950, rend_intergenic: 4122  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 14615, rend_intergenic: 12500  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 18259, rend_intergenic: 14980  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 23651, rend_intergenic: 21385  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 41107, rend_intergenic: 38578  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 43490, rend_intergenic: 42876  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 61181, rend_intergenic: 43530  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 74434, rend_intergenic: 61639  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 86848, rend_intergenic: 74727  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 106135, rend_intergenic: 95084  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 128129, rend_intergenic: 113972  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 140047, rend_intergenic: 135061  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 154157, rend_intergenic: 150211  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 154508, rend_intergenic: 154161  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 157336, rend_intergenic: 154569  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 171530, rend_intergenic: 162518  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 190155, rend_intergenic: 182671  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 191438, rend_intergenic: 190614  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 203915, rend_intergenic: 191968  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 206932
-exon list size: 821


building trellis

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48.8    
49.0    
49.1    
49.2    
49.3    
49.5    
49.6    
49.7    
49.8    
49.9    
50.1    
50.2    
50.3    
50.4    
50.5    
50.7    
50.8    
50.9    
51.0    
51.2    
51.3    
51.4    
51.5    
51.6    
51.8    
51.9    
52.0    
52.1    
52.2    
52.4    
52.5    
52.6    
52.7    
52.9    
53.0    
53.1    
53.2    
53.3    
53.5    
53.6    
53.7    
53.8    
53.9    
54.1    
54.2    
54.3    
54.4    
54.6    
54.7    
54.8    
54.9    
55.0    
55.2    
55.3    
55.4    
55.5    
55.7    
55.8    
55.9    
56.0    
56.1    
56.3    
56.4    
56.5    
56.6    
56.7    
56.9    
57.0    
57.1    
57.2    
57.4    
57.5    
57.6    
57.7    
57.8    
58.0    
58.1    
58.2    
58.3    
58.4    
58.6    
58.7    
58.8    
58.9    
59.1    
59.2    
59.3    
59.4    
59.5    
59.7    
59.8    
59.9    
60.0    
60.1    
60.3    
60.4    
60.5    
60.6    
60.8    
60.9    
61.0    
61.1    
61.2    
61.4    
61.5    
61.6    
61.7    
61.8    
62.0    
62.1    
62.2    
62.3    
62.5    
62.6    
62.7    
62.8    
62.9    
63.1    
63.2    
63.3    
63.4    
63.5    
63.7    
63.8    
63.9    
64.0    
64.2    
64.3    
64.4    
64.5    
64.6    
64.8    
64.9    
65.0    
65.1    
65.2    
65.4    
65.5    
65.6    
65.7    
65.9    
66.0    
66.1    
66.2    
66.3    
66.5    
66.6    
66.7    
66.8    
67.0    
67.1    
67.2    
67.3    
67.4    
67.6    
67.7    
67.8    
67.9    
68.0    
68.2    
68.3    
68.4    
68.5    
68.7    
68.8    
68.9    
69.0    
69.1    
69.3    
69.4    
69.5    
69.6    
69.7    
69.9    
70.0    
70.1    
70.2    
70.4    
70.5    
70.6    
70.7    
70.8    
71.0    
71.1    
71.2    
71.3    
71.4    
71.6    
71.7    
71.8    
71.9    
72.1    
72.2    
72.3    
72.4    
72.5    
72.7    
72.8    
72.9    
73.0    
73.1    
73.3    
73.4    
73.5    
73.6    
73.8    
73.9    
74.0    
74.1    
74.2    
74.4    
74.5    
74.6    
74.7    
74.8    
75.0    
75.1    
75.2    
75.3    
75.5    
75.6    
75.7    
75.8    
75.9    
76.1    
76.2    
76.3    
76.4    
76.5    
76.7    
76.8    
76.9    
77.0    
77.2    
77.3    
77.4    
77.5    
77.6    
77.8    
77.9    
78.0    
78.1    
78.3    
78.4    
78.5    
78.6    
78.7    
78.9    
79.0    
79.1    
79.2    
79.3    
79.5    
79.6    
79.7    
79.8    
80.0    
80.1    
80.2    
80.3    
80.4    
80.6    
80.7    
80.8    
80.9    
81.0    
81.2    
81.3    
81.4    
81.5    
81.7    
81.8    
81.9    
82.0    
82.1    
82.3    
82.4    
82.5    
82.6    
82.7    
82.9    
83.0    
83.1    
83.2    
83.4    
83.5    
83.6    
83.7    
83.8    
84.0    
84.1    
84.2    
84.3    
84.4    
84.6    
84.7    
84.8    
84.9    
85.1    
85.2    
85.3    
85.4    
85.5    
85.7    
85.8    
85.9    
86.0    
86.1    
86.3    
86.4    
86.5    
86.6    
86.8    
86.9    
87.0    
87.1    
87.2    
87.4    
87.5    
87.6    
87.7    
87.8    
88.0    
88.1    
88.2    
88.3    
88.5    
88.6    
88.7    
88.8    
88.9    
89.1    
89.2    
89.3    
89.4    
89.6    
89.7    
89.8    
89.9    
90.0    
90.2    
90.3    
90.4    
90.5    
90.6    
90.8    
90.9    
91.0    
91.1    
91.3    
91.4    
91.5    
91.6    
91.7    
91.9    
92.0    
92.1    
92.2    
92.3    
92.5    
92.6    
92.7    
92.8    
93.0    
93.1    
93.2    
93.3    
93.4    
93.6    
93.7    
93.8    
93.9    
94.0    
94.2    
94.3    
94.4    
94.5    
94.7    
94.8    
94.9    
95.0    
95.1    
95.3    
95.4    
95.5    
95.6    
95.7    
95.9    
96.0    
96.1    
96.2    
96.4    
96.5    
96.6    
96.7    
96.8    
97.0    
97.1    
97.2    
97.3    
97.4    
97.6    
97.7    
97.8    
97.9    
98.1    
98.2    
98.3    
98.4    
98.5    
98.7    
98.8    
98.9    
99.0    
99.1    
99.3    
99.4    
99.5    
99.6    
99.8    
99.9    
-found 41 predictions from path traversal
Error with prediction: snap lend_intergenic: 9950, rend_intergenic: 4122  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 14615, rend_intergenic: 12500  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 18259, rend_intergenic: 14980  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 23651, rend_intergenic: 21385  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 41107, rend_intergenic: 38578  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 43490, rend_intergenic: 42876  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 61181, rend_intergenic: 43530  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 74434, rend_intergenic: 61639  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 86848, rend_intergenic: 74727  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 106135, rend_intergenic: 95084  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 128129, rend_intergenic: 113972  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 140047, rend_intergenic: 135061  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 154157, rend_intergenic: 150211  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 154508, rend_intergenic: 154161  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 157336, rend_intergenic: 154569  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 171530, rend_intergenic: 162518  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 190155, rend_intergenic: 182671  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 191438, rend_intergenic: 190614  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 203915, rend_intergenic: 191968  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 15 predictions persist after filtering for low support