-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_1217

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)
-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Couldn't classify 2757, 2783
Sorry, prediction GeneMark_model.109045_t fails validation.
(ATG)	 AC	352-380	GT	CAG
(GAG)	 AG	728-736	GT	AGG
(AGG)	 AG	757-807	GT	GAG
(GCC)	 AG	2421-2519	GT	GAG
(AGA)	 AG	2579-2731	GT	GAG
(AAT)	 AG	2757-2783	GT	GTG
-recovered GeneMark_model.109045_t, initial, 352, 380
-recovered GeneMark_model.109045_t, terminal, 2579, 2731
-recovered GeneMark_model.109045_t, internal, 728, 736
-recovered GeneMark_model.109045_t, internal, 757, 807
-recovered GeneMark_model.109045_t, internal, 2421, 2519
-recovered GeneMark_model.109045_t, internal, 2579, 2731
-recovered GeneMark_model.109045_t, internal, 2757, 2783
Couldn't classify 2364, 2530
Sorry, prediction snap_scaffold_1217-snap.1-T1 fails validation.
(ATG)	 AC	352-380	GT	CAG
(CCC)	 AG	2364-2530	GT	ATG
-recovered snap_scaffold_1217-snap.1-T1, initial, 352, 380
-recovered snap_scaffold_1217-snap.1-T1, internal, 2364, 2530

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 2951
-exon list size: 13


building trellis

6.7    
13.3    
20.0    
26.7    
33.3    
40.0    
46.7    
53.3    
60.0    
66.7    
73.3    
80.0    
86.7    
93.3    
-found 1 predictions from path traversal

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support