-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_12/scaffold_12_8294825-8535429

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for Augustus_model.g20192.t1
Valid prediction for snap_scaffold_12-snap.1588-T1
Valid prediction for snap_scaffold_12-snap.1592-T1
Valid prediction for GeneMark_model.52335_t
Valid prediction for GeneMark_model.52329_t
Valid prediction for GlimmerHMM_glimmerT_30298-T1
Valid prediction for snap_scaffold_12-snap.1595-T1
Valid prediction for GeneMark_model.52318_t
Valid prediction for GlimmerHMM_glimmerT_30286-T1
Valid prediction for HiQ_model.g20181.t1
Valid prediction for GeneMark_model.52357_t
Valid prediction for GlimmerHMM_glimmerT_30296-T1
Valid prediction for snap_scaffold_12-snap.1599-T1
Valid prediction for snap_scaffold_12-snap.1569-T1
Valid prediction for GeneMark_model.52330_t
Valid prediction for snap_scaffold_12-snap.1576-T1
Valid prediction for GlimmerHMM_glimmerT_30282-T1
Valid prediction for GeneMark_model.52374_t
Valid prediction for GeneMark_model.52333_t
Valid prediction for GeneMark_model.52371_t
Valid prediction for Augustus_model.g20180.t1
Valid prediction for snap_scaffold_12-snap.1570-T1
Valid prediction for Augustus_model.g20193.t1
Valid prediction for GeneMark_model.52339_t
Valid prediction for GeneMark_model.52359_t
Valid prediction for snap_scaffold_12-snap.1572-T1
Valid prediction for GeneMark_model.52316_t
Valid prediction for GlimmerHMM_glimmerT_30280-T1
Valid prediction for GeneMark_model.52341_t
Valid prediction for GeneMark_model.52321_t
Valid prediction for pasa_asmbl_8780.p1
Valid prediction for snap_scaffold_12-snap.1571-T1
Valid prediction for snap_scaffold_12-snap.1611-T1
Valid prediction for snap_scaffold_12-snap.1614-T1
Valid prediction for GlimmerHMM_glimmerT_30300-T1
Valid prediction for GeneMark_model.52385_t
Valid prediction for GeneMark_model.52327_t
Valid prediction for GeneMark_model.52348_t
Valid prediction for GeneMark_model.52325_t
Valid prediction for snap_scaffold_12-snap.1608-T1
Valid prediction for GeneMark_model.52350_t
Valid prediction for GeneMark_model.52352_t
Valid prediction for Augustus_model.g20179.t1
Valid prediction for snap_scaffold_12-snap.1584-T1
Valid prediction for GeneMark_model.52328_t
Valid prediction for snap_scaffold_12-snap.1605-T1
Valid prediction for GeneMark_model.52377_t
Valid prediction for GeneMark_model.52332_t
Valid prediction for GeneMark_model.52337_t
Valid prediction for GeneMark_model.52354_t
Valid prediction for snap_scaffold_12-snap.1604-T1
Valid prediction for snap_scaffold_12-snap.1583-T1
Valid prediction for GlimmerHMM_glimmerT_30288-T1
Valid prediction for snap_scaffold_12-snap.1574-T1
Valid prediction for GeneMark_model.52389_t
Valid prediction for snap_scaffold_12-snap.1607-T1
Valid prediction for GeneMark_model.52383_t
Valid prediction for GeneMark_model.52363_t
Valid prediction for GlimmerHMM_glimmerT_30292-T1
Valid prediction for GlimmerHMM_glimmerT_30307-T1
Valid prediction for GeneMark_model.52368_t
Couldn't classify 28472, 28568
Sorry, prediction pasa_asmbl_8781.p1 fails validation.
(GCG)	 GG	28472-28568	GT	CGG
(TGA)	 AG	30485-30795	GA	AGG
-recovered pasa_asmbl_8781.p1, terminal, 30485, 30795
Valid prediction for snap_scaffold_12-snap.1597-T1
Valid prediction for GeneMark_model.52381_t
Valid prediction for GeneMark_model.52346_t
Valid prediction for GeneMark_model.52366_t
Valid prediction for snap_scaffold_12-snap.1586-T1
Valid prediction for snap_scaffold_12-snap.1603-T1
Valid prediction for GlimmerHMM_glimmerT_30306-T1
Valid prediction for GeneMark_model.52343_t
Valid prediction for snap_scaffold_12-snap.1581-T1
Couldn't classify 85395, 85760
Sorry, prediction pasa_asmbl_7745.p1 fails validation.
(TCT)	 TC	85395-85760	TG	AGT
Valid prediction for snap_scaffold_12-snap.1591-T1
Valid prediction for GlimmerHMM_glimmerT_30279-T1
Valid prediction for GeneMark_model.52320_t
Valid prediction for GeneMark_model.52361_t
Valid prediction for snap_scaffold_12-snap.1606-T1
Valid prediction for GeneMark_model.52375_t
Valid prediction for GlimmerHMM_glimmerT_30287-T1
Valid prediction for GeneMark_model.52387_t
Valid prediction for GeneMark_model.52315_t
Valid prediction for snap_scaffold_12-snap.1578-T1
Valid prediction for snap_scaffold_12-snap.1601-T1
Valid prediction for GlimmerHMM_glimmerT_30309-T1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for Augustus_model.g20182.t1
Valid prediction for snap_scaffold_12-snap.1602-T1
Valid prediction for snap_scaffold_12-snap.1615-T1
Valid prediction for GeneMark_model.52324_t
Valid prediction for GlimmerHMM_glimmerT_30297-T1
Valid prediction for GeneMark_model.52317_t
Valid prediction for GeneMark_model.52382_t
Valid prediction for GeneMark_model.52360_t
Valid prediction for GlimmerHMM_glimmerT_30295-T1
Valid prediction for GlimmerHMM_glimmerT_30303-T1
Valid prediction for Augustus_model.g20189.t1
Couldn't classify 140037, 140130
Couldn't classify 143625, 143762
Sorry, prediction pasa_asmbl_7747.p1 fails validation.
(GAC)	 TG	140037-140130	GT	AGG
(ATA)	 AG	142701-142765	GT	AGG
(CTC)	 AG	143625-143762	AA	AGA
-recovered pasa_asmbl_7747.p1, internal, 142701, 142765
Valid prediction for GeneMark_model.52370_t
Valid prediction for snap_scaffold_12-snap.1580-T1
Valid prediction for GeneMark_model.52351_t
Couldn't classify 59536, 59706
Sorry, prediction pasa_asmbl_7748.p1 fails validation.
(CTG)	 CC	59536-59706	GT	AGG
(GCT)	 AG	59939-60022	GT	AGG
(ATC)	 AG	60447-60584	GT	TGG
(CCT)	 AG	60871-60995	GT	GGG
(CGG)	 AG	61591-61783	GT	GGG
(CTG)	 AG	61990-62095	GT	AGG
(GCC)	 AG	62245-62396	GT	AGG
(ACC)	 AG	62491-62553	AG	GAA
-recovered pasa_asmbl_7748.p1, terminal, 62491, 62553
-recovered pasa_asmbl_7748.p1, internal, 59939, 60022
-recovered pasa_asmbl_7748.p1, internal, 60447, 60584
-recovered pasa_asmbl_7748.p1, internal, 60871, 60995
-recovered pasa_asmbl_7748.p1, internal, 61591, 61783
-recovered pasa_asmbl_7748.p1, internal, 61990, 62095
-recovered pasa_asmbl_7748.p1, internal, 62245, 62396
Valid prediction for GeneMark_model.52323_t
Valid prediction for snap_scaffold_12-snap.1575-T1
Valid prediction for GeneMark_model.52356_t
Valid prediction for GlimmerHMM_glimmerT_30285-T1
Valid prediction for snap_scaffold_12-snap.1594-T1
Valid prediction for snap_scaffold_12-snap.1593-T1
Valid prediction for GeneMark_model.52391_t
Valid prediction for GeneMark_model.52347_t
Valid prediction for Augustus_model.g20191.t1
Valid prediction for snap_scaffold_12-snap.1596-T1
Valid prediction for GeneMark_model.52319_t
Valid prediction for snap_scaffold_12-snap.1589-T1
Valid prediction for GeneMark_model.52365_t
Valid prediction for Augustus_model.g20188.t1
Valid prediction for snap_scaffold_12-snap.1610-T1
Valid prediction for GeneMark_model.52372_t
Valid prediction for GeneMark_model.52362_t
Valid prediction for GeneMark_model.52322_t
Valid prediction for Augustus_model.g20194.t1
Valid prediction for GlimmerHMM_glimmerT_30290-T1
Valid prediction for Augustus_model.g20186.t1
Valid prediction for GeneMark_model.52364_t
Valid prediction for GlimmerHMM_glimmerT_30311-T1
Valid prediction for GeneMark_model.52388_t
Valid prediction for GeneMark_model.52390_t
Valid prediction for snap_scaffold_12-snap.1573-T1
Valid prediction for snap_scaffold_12-snap.1612-T1
Valid prediction for GeneMark_model.52376_t
Valid prediction for snap_scaffold_12-snap.1590-T1
Valid prediction for snap_scaffold_12-snap.1582-T1
Valid prediction for snap_scaffold_12-snap.1579-T1
Valid prediction for GeneMark_model.52349_t
Valid prediction for GlimmerHMM_glimmerT_30308-T1
Valid prediction for GlimmerHMM_glimmerT_30293-T1
Valid prediction for GeneMark_model.52386_t
Valid prediction for GlimmerHMM_glimmerT_30310-T1
Valid prediction for GeneMark_model.52373_t
Valid prediction for GeneMark_model.52355_t
Valid prediction for Augustus_model.g20187.t1
Valid prediction for GeneMark_model.52331_t
Valid prediction for GlimmerHMM_glimmerT_30301-T1
Valid prediction for GeneMark_model.52336_t
Valid prediction for Augustus_model.g20195.t1
Valid prediction for GlimmerHMM_glimmerT_30289-T1
Valid prediction for GeneMark_model.52380_t
Valid prediction for snap_scaffold_12-snap.1609-T1
Valid prediction for Augustus_model.g20184.t1
Valid prediction for Augustus_model.g20183.t1
Valid prediction for snap_scaffold_12-snap.1587-T1
Valid prediction for GlimmerHMM_glimmerT_30312-T1
Valid prediction for GeneMark_model.52358_t
Valid prediction for GlimmerHMM_glimmerT_30294-T1
Valid prediction for Augustus_model.g20185.t1
Valid prediction for GlimmerHMM_glimmerT_30302-T1
Valid prediction for snap_scaffold_12-snap.1600-T1
Couldn't classify 177754, 177816
Couldn't classify 178863, 178987
Couldn't classify 179146, 179310
Couldn't classify 179787, 179918
Sorry, prediction pasa_asmbl_7743.p1 fails validation.
(GTG)	 AT	177754-177816	GT	AGG
(AAC)	 AG	177906-178007	GT	TGG
(ATG)	 AG	178100-178339	GT	AGG
(CTG)	 AG	178611-178740	GT	AGG
(TGT)	 AG	178863-178987	AT	CCA
(AGC)	 AC	179146-179310	GT	AGG
(CAA)	 AG	179787-179918	GG	CAG
-recovered pasa_asmbl_7743.p1, initial, 178100, 178339
-recovered pasa_asmbl_7743.p1, internal, 177906, 178007
-recovered pasa_asmbl_7743.p1, internal, 178100, 178339
-recovered pasa_asmbl_7743.p1, internal, 178611, 178740
Valid prediction for GeneMark_model.52344_t
Valid prediction for GeneMark_model.52326_t
Valid prediction for GeneMark_model.52338_t
Valid prediction for Augustus_model.g20190.t1
Valid prediction for GeneMark_model.52314_t
Valid prediction for GeneMark_model.52384_t
Valid prediction for GlimmerHMM_glimmerT_30291-T1
Valid prediction for GlimmerHMM_glimmerT_30305-T1
Valid prediction for snap_scaffold_12-snap.1613-T1
Valid prediction for snap_scaffold_12-snap.1585-T1
Valid prediction for GlimmerHMM_glimmerT_30299-T1
Valid prediction for GeneMark_model.52369_t
Valid prediction for GeneMark_model.52345_t
Valid prediction for GeneMark_model.52367_t
Valid prediction for GeneMark_model.52353_t
Valid prediction for GeneMark_model.52378_t
Valid prediction for snap_scaffold_12-snap.1598-T1
Valid prediction for snap_scaffold_12-snap.1577-T1
Valid prediction for GlimmerHMM_glimmerT_30281-T1
Valid prediction for GlimmerHMM_glimmerT_30304-T1
Valid prediction for GlimmerHMM_glimmerT_30283-T1
Valid prediction for GeneMark_model.52334_t
Valid prediction for GeneMark_model.52342_t
Valid prediction for GeneMark_model.52340_t
Valid prediction for GlimmerHMM_glimmerT_30284-T1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 22233, rend_intergenic: 20092  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 23615, rend_intergenic: 23355  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 28642, rend_intergenic: 23713  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 30795, rend_intergenic: 28790  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 52714, rend_intergenic: 45858  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 73753, rend_intergenic: 52875  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 78080, rend_intergenic: 73885  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 91086, rend_intergenic: 79417  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 102490, rend_intergenic: 91103  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 116297, rend_intergenic: 108081  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 138075, rend_intergenic: 129947  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 146651, rend_intergenic: 140648  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 147532, rend_intergenic: 147097  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 156237, rend_intergenic: 148352  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 173114, rend_intergenic: 168075  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 179063, rend_intergenic: 176374  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 207230, rend_intergenic: 179128  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 215501, rend_intergenic: 208031  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 218390, rend_intergenic: 215857  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 228180, rend_intergenic: 218928  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 235440, rend_intergenic: 229098  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: GlimmerHMM lend_intergenic: 212539, rend_intergenic: 212536  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 240605
-exon list size: 938


building trellis

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50.9    
51.0    
51.1    
51.2    
51.3    
51.4    
51.5    
51.6    
51.7    
51.8    
51.9    
52.0    
52.1    
52.2    
52.3    
52.4    
52.6    
52.7    
52.8    
52.9    
53.0    
53.1    
53.2    
53.3    
53.4    
53.5    
53.6    
53.7    
53.8    
53.9    
54.0    
54.1    
54.3    
54.4    
54.5    
54.6    
54.7    
54.8    
54.9    
55.0    
55.1    
55.2    
55.3    
55.4    
55.5    
55.6    
55.7    
55.9    
56.0    
56.1    
56.2    
56.3    
56.4    
56.5    
56.6    
56.7    
56.8    
56.9    
57.0    
57.1    
57.2    
57.3    
57.4    
57.6    
57.7    
57.8    
57.9    
58.0    
58.1    
58.2    
58.3    
58.4    
58.5    
58.6    
58.7    
58.8    
58.9    
59.0    
59.1    
59.3    
59.4    
59.5    
59.6    
59.7    
59.8    
59.9    
60.0    
60.1    
60.2    
60.3    
60.4    
60.5    
60.6    
60.7    
60.9    
61.0    
61.1    
61.2    
61.3    
61.4    
61.5    
61.6    
61.7    
61.8    
61.9    
62.0    
62.1    
62.2    
62.3    
62.4    
62.6    
62.7    
62.8    
62.9    
63.0    
63.1    
63.2    
63.3    
63.4    
63.5    
63.6    
63.7    
63.8    
63.9    
64.0    
64.1    
64.3    
64.4    
64.5    
64.6    
64.7    
64.8    
64.9    
65.0    
65.1    
65.2    
65.3    
65.4    
65.5    
65.6    
65.7    
65.9    
66.0    
66.1    
66.2    
66.3    
66.4    
66.5    
66.6    
66.7    
66.8    
66.9    
67.0    
67.1    
67.2    
67.3    
67.4    
67.6    
67.7    
67.8    
67.9    
68.0    
68.1    
68.2    
68.3    
68.4    
68.5    
68.6    
68.7    
68.8    
68.9    
69.0    
69.1    
69.3    
69.4    
69.5    
69.6    
69.7    
69.8    
69.9    
70.0    
70.1    
70.2    
70.3    
70.4    
70.5    
70.6    
70.7    
70.9    
71.0    
71.1    
71.2    
71.3    
71.4    
71.5    
71.6    
71.7    
71.8    
71.9    
72.0    
72.1    
72.2    
72.3    
72.4    
72.6    
72.7    
72.8    
72.9    
73.0    
73.1    
73.2    
73.3    
73.4    
73.5    
73.6    
73.7    
73.8    
73.9    
74.0    
74.1    
74.3    
74.4    
74.5    
74.6    
74.7    
74.8    
74.9    
75.0    
75.1    
75.2    
75.3    
75.4    
75.5    
75.6    
75.7    
75.9    
76.0    
76.1    
76.2    
76.3    
76.4    
76.5    
76.6    
76.7    
76.8    
76.9    
77.0    
77.1    
77.2    
77.3    
77.4    
77.6    
77.7    
77.8    
77.9    
78.0    
78.1    
78.2    
78.3    
78.4    
78.5    
78.6    
78.7    
78.8    
78.9    
79.0    
79.1    
79.3    
79.4    
79.5    
79.6    
79.7    
79.8    
79.9    
80.0    
80.1    
80.2    
80.3    
80.4    
80.5    
80.6    
80.7    
80.9    
81.0    
81.1    
81.2    
81.3    
81.4    
81.5    
81.6    
81.7    
81.8    
81.9    
82.0    
82.1    
82.2    
82.3    
82.4    
82.6    
82.7    
82.8    
82.9    
83.0    
83.1    
83.2    
83.3    
83.4    
83.5    
83.6    
83.7    
83.8    
83.9    
84.0    
84.1    
84.3    
84.4    
84.5    
84.6    
84.7    
84.8    
84.9    
85.0    
85.1    
85.2    
85.3    
85.4    
85.5    
85.6    
85.7    
85.9    
86.0    
86.1    
86.2    
86.3    
86.4    
86.5    
86.6    
86.7    
86.8    
86.9    
87.0    
87.1    
87.2    
87.3    
87.4    
87.6    
87.7    
87.8    
87.9    
88.0    
88.1    
88.2    
88.3    
88.4    
88.5    
88.6    
88.7    
88.8    
88.9    
89.0    
89.1    
89.3    
89.4    
89.5    
89.6    
89.7    
89.8    
89.9    
90.0    
90.1    
90.2    
90.3    
90.4    
90.5    
90.6    
90.7    
90.9    
91.0    
91.1    
91.2    
91.3    
91.4    
91.5    
91.6    
91.7    
91.8    
91.9    
92.0    
92.1    
92.2    
92.3    
92.4    
92.6    
92.7    
92.8    
92.9    
93.0    
93.1    
93.2    
93.3    
93.4    
93.5    
93.6    
93.7    
93.8    
93.9    
94.0    
94.1    
94.3    
94.4    
94.5    
94.6    
94.7    
94.8    
94.9    
95.0    
95.1    
95.2    
95.3    
95.4    
95.5    
95.6    
95.7    
95.9    
96.0    
96.1    
96.2    
96.3    
96.4    
96.5    
96.6    
96.7    
96.8    
96.9    
97.0    
97.1    
97.2    
97.3    
97.4    
97.6    
97.7    
97.8    
97.9    
98.0    
98.1    
98.2    
98.3    
98.4    
98.5    
98.6    
98.7    
98.8    
98.9    
99.0    
99.1    
99.3    
99.4    
99.5    
99.6    
99.7    
99.8    
99.9    
-found 43 predictions from path traversal
Error with prediction: snap lend_intergenic: 22233, rend_intergenic: 20092  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 23615, rend_intergenic: 23355  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 28642, rend_intergenic: 23713  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 30795, rend_intergenic: 28790  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 52714, rend_intergenic: 45858  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 73753, rend_intergenic: 52875  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 78080, rend_intergenic: 73885  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 91086, rend_intergenic: 79417  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 102490, rend_intergenic: 91103  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 116297, rend_intergenic: 108081  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 138075, rend_intergenic: 129947  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 146651, rend_intergenic: 140648  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 147532, rend_intergenic: 147097  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 156237, rend_intergenic: 148352  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 173114, rend_intergenic: 168075  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 179063, rend_intergenic: 176374  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 207230, rend_intergenic: 179128  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 215501, rend_intergenic: 208031  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 218390, rend_intergenic: 215857  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 228180, rend_intergenic: 218928  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 235440, rend_intergenic: 229098  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: GlimmerHMM lend_intergenic: 212539, rend_intergenic: 212536  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 17 predictions persist after filtering for low support