-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_12/scaffold_12_15449064-15725393 -reading genomic sequence. ** Processing features (+) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: +) -loading gene prediction evidence. (strand: +)Valid prediction for snap_scaffold_12-snap.3025-T1 Valid prediction for snap_scaffold_12-snap.2998-T1 Valid prediction for snap_scaffold_12-snap.3007-T1 Valid prediction for snap_scaffold_12-snap.3039-T1 Valid prediction for GeneMark_model.54153_t Valid prediction for GeneMark_model.54111_t Valid prediction for GlimmerHMM_glimmerT_31345-T1 Valid prediction for GeneMark_model.54099_t Valid prediction for GlimmerHMM_glimmerT_31337-T1 Valid prediction for snap_scaffold_12-snap.2993-T1 Valid prediction for GeneMark_model.54132_t Valid prediction for GeneMark_model.54163_t Valid prediction for HiQ_model.g20913.t1 Valid prediction for GlimmerHMM_glimmerT_31342-T1 Valid prediction for GeneMark_model.54092_t Valid prediction for GeneMark_model.54128_t Valid prediction for GeneMark_model.54105_t Valid prediction for Augustus_model.g20914.t1 Valid prediction for snap_scaffold_12-snap.2997-T1 Valid prediction for GlimmerHMM_glimmerT_31368-T1 Valid prediction for snap_scaffold_12-snap.2976-T1 Valid prediction for GeneMark_model.54162_t Valid prediction for GeneMark_model.54118_t Valid prediction for GlimmerHMM_glimmerT_31341-T1 Valid prediction for GlimmerHMM_glimmerT_31355-T1 Valid prediction for GeneMark_model.54122_t Valid prediction for GeneMark_model.54089_t Valid prediction for GeneMark_model.54103_t Valid prediction for GeneMark_model.54125_t Valid prediction for GeneMark_model.54131_t Valid prediction for snap_scaffold_12-snap.3015-T1 Valid prediction for snap_scaffold_12-snap.2977-T1 Valid prediction for GeneMark_model.54096_t Valid prediction for Augustus_model.g20896.t1 Valid prediction for GeneMark_model.54143_t Valid prediction for GeneMark_model.54145_t Valid prediction for snap_scaffold_12-snap.2986-T1 Valid prediction for GeneMark_model.54160_t Valid prediction for snap_scaffold_12-snap.2990-T1 Valid prediction for snap_scaffold_12-snap.2994-T1 Valid prediction for GeneMark_model.54116_t Valid prediction for snap_scaffold_12-snap.3014-T1 Valid prediction for snap_scaffold_12-snap.2981-T1 Valid prediction for snap_scaffold_12-snap.3006-T1 Valid prediction for snap_scaffold_12-snap.2978-T1 Valid prediction for GeneMark_model.54107_t Valid prediction for GlimmerHMM_glimmerT_31354-T1 Valid prediction for GeneMark_model.54114_t Valid prediction for snap_scaffold_12-snap.3002-T1 Valid prediction for GeneMark_model.54101_t Valid prediction for GeneMark_model.54126_t Valid prediction for GlimmerHMM_glimmerT_31348-T1 Valid prediction for GeneMark_model.54091_t Valid prediction for GeneMark_model.54130_t Couldn't classify 196023, 196223 Sorry, prediction pasa_asmbl_9093.p1 fails validation. (ATG) AA 194298-194942 GT AGG (GTG) AG 196023-196223 GA GAG -recovered pasa_asmbl_9093.p1, initial, 194298, 194942 Valid prediction for GeneMark_model.54140_t Valid prediction for snap_scaffold_12-snap.3011-T1 Valid prediction for snap_scaffold_12-snap.3038-T1 Valid prediction for GeneMark_model.54138_t Valid prediction for GlimmerHMM_glimmerT_31339-T1 Valid prediction for snap_scaffold_12-snap.3008-T1 Valid prediction for GlimmerHMM_glimmerT_31360-T1 Valid prediction for pasa_asmbl_9095.p1 Valid prediction for GeneMark_model.54113_t Valid prediction for snap_scaffold_12-snap.3033-T1 Valid prediction for GeneMark_model.54094_t Valid prediction for snap_scaffold_12-snap.3016-T1 Valid prediction for snap_scaffold_12-snap.3036-T1 Valid prediction for GeneMark_model.54147_t Valid prediction for GeneMark_model.54109_t Valid prediction for GlimmerHMM_glimmerT_31369-T1 Valid prediction for GeneMark_model.54120_t Valid prediction for snap_scaffold_12-snap.2980-T1 Valid prediction for GlimmerHMM_glimmerT_31352-T1 Valid prediction for GlimmerHMM_glimmerT_31350-T1 Valid prediction for Augustus_model.g20901.t1 Valid prediction for CodingQuarry_transcript_10479-T1 Valid prediction for Augustus_model.g20906.t1 Valid prediction for GlimmerHMM_glimmerT_31367-T1 Valid prediction for Augustus_model.g20902.t1 Valid prediction for GeneMark_model.54136_t Valid prediction for GlimmerHMM_glimmerT_31362-T1 Valid prediction for snap_scaffold_12-snap.2999-T1 Valid prediction for snap_scaffold_12-snap.3004-T1 Valid prediction for snap_scaffold_12-snap.3042-T1 Valid prediction for GeneMark_model.54134_t Valid prediction for snap_scaffold_12-snap.3021-T1 Valid prediction for snap_scaffold_12-snap.2991-T1 Valid prediction for GeneMark_model.54156_t Valid prediction for GeneMark_model.54151_t Valid prediction for snap_scaffold_12-snap.2988-T1 Valid prediction for HiQ_model.g20909.t1 Valid prediction for Augustus_model.g20915.t1 Valid prediction for GeneMark_model.54087_t Valid prediction for pasa_asmbl_9098.p1 Valid prediction for GlimmerHMM_glimmerT_31366-T1 Valid prediction for GeneMark_model.54095_t Valid prediction for GeneMark_model.54124_t Valid prediction for Augustus_model.g20900.t1 Valid prediction for GlimmerHMM_glimmerT_31347-T1 Valid prediction for GeneMark_model.54159_t Valid prediction for GeneMark_model.54164_t Valid prediction for snap_scaffold_12-snap.3032-T1 Valid prediction for snap_scaffold_12-snap.3026-T1 Valid prediction for GlimmerHMM_glimmerT_31346-T1 -loading the search evidence (protein and EST search results, strand: +) -scoring exons (strand: +) ** Processing features (-) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: -) -loading gene prediction evidence. (strand: -)Valid prediction for GlimmerHMM_glimmerT_31358-T1 Valid prediction for snap_scaffold_12-snap.3040-T1 Valid prediction for Augustus_model.g20903.t1 Valid prediction for snap_scaffold_12-snap.2982-T1 Valid prediction for Augustus_model.g20907.t1 Valid prediction for GeneMark_model.54121_t Valid prediction for Augustus_model.g20916.t1 Valid prediction for GlimmerHMM_glimmerT_31361-T1 Valid prediction for snap_scaffold_12-snap.3022-T1 Sorry, intron length (7) is less than minimum required (10) Valid prediction for CodingQuarry_transcript_10475-T1 Valid prediction for GlimmerHMM_glimmerT_31338-T1 Valid prediction for GlimmerHMM_glimmerT_31340-T1 Valid prediction for Augustus_model.g20893.t1 Valid prediction for GeneMark_model.54144_t Valid prediction for snap_scaffold_12-snap.3030-T1 Valid prediction for snap_scaffold_12-snap.3019-T1 Valid prediction for GlimmerHMM_glimmerT_31344-T1 Valid prediction for GlimmerHMM_glimmerT_31371-T1 Valid prediction for snap_scaffold_12-snap.2995-T1 Valid prediction for Augustus_model.g20895.t1 Valid prediction for GeneMark_model.54157_t Valid prediction for snap_scaffold_12-snap.3018-T1 Valid prediction for GeneMark_model.54152_t Valid prediction for GeneMark_model.54110_t Valid prediction for snap_scaffold_12-snap.3017-T1 Valid prediction for GeneMark_model.54117_t Valid prediction for GeneMark_model.54115_t Valid prediction for snap_scaffold_12-snap.2979-T1 Valid prediction for GeneMark_model.54161_t Valid prediction for GlimmerHMM_glimmerT_31370-T1 Valid prediction for GeneMark_model.54129_t Valid prediction for GlimmerHMM_glimmerT_31363-T1 Valid prediction for GlimmerHMM_glimmerT_31353-T1 Valid prediction for snap_scaffold_12-snap.2989-T1 Sorry, intron length (4) is less than minimum required (10) Valid prediction for CodingQuarry_transcript_10477-T1 Valid prediction for GeneMark_model.54155_t Valid prediction for snap_scaffold_12-snap.3023-T1 Valid prediction for GlimmerHMM_glimmerT_31365-T1 Valid prediction for GeneMark_model.54097_t Valid prediction for snap_scaffold_12-snap.2975-T1 Valid prediction for snap_scaffold_12-snap.3034-T1 Couldn't classify 35263, 35349 Couldn't classify 35437, 35462 Sorry, prediction CodingQuarry_transcript_10478-T1 fails validation. (ATG) CC 34107-34198 GT AGG (ATT) AG 34349-34433 GT AGG (GTG) AG 34646-34746 GT CGG (GTT) AG 34924-34999 GT ATG (TTT) AG 35263-35349 AT ATA (GGA) AT 35437-35462 GT ATG (TCG) AG 35552-35690 GT ATG (ATG) AG 35835-35924 GT CAG (GGT) AG 36047-36148 GT GGG (ACG) AG 36414-36777 GT AGG (TTC) AG 37029-37191 GT AGG (GAA) AG 37280-37334 CT AAC -recovered CodingQuarry_transcript_10478-T1, initial, 34107, 34198 -recovered CodingQuarry_transcript_10478-T1, initial, 35835, 35924 add_exon() Sorry, CodingQuarry_transcript_10478-T1 37029-37191-terminal-3 is invalid. -recovered CodingQuarry_transcript_10478-T1, terminal, 37029, 37191 -recovered CodingQuarry_transcript_10478-T1, terminal, 37280, 37334 -recovered CodingQuarry_transcript_10478-T1, internal, 34349, 34433 -recovered CodingQuarry_transcript_10478-T1, internal, 34646, 34746 -recovered CodingQuarry_transcript_10478-T1, internal, 34924, 34999 -recovered CodingQuarry_transcript_10478-T1, internal, 35552, 35690 -recovered CodingQuarry_transcript_10478-T1, internal, 35835, 35924 -recovered CodingQuarry_transcript_10478-T1, internal, 36047, 36148 -recovered CodingQuarry_transcript_10478-T1, internal, 36414, 36777 -recovered CodingQuarry_transcript_10478-T1, internal, 37029, 37191 Valid prediction for snap_scaffold_12-snap.3010-T1 Valid prediction for GeneMark_model.54142_t Valid prediction for CodingQuarry_transcript_10471-T1 Valid prediction for GeneMark_model.54127_t Valid prediction for GeneMark_model.54102_t Valid prediction for GeneMark_model.54154_t Valid prediction for Augustus_model.g20899.t1 Valid prediction for GeneMark_model.54093_t Valid prediction for GlimmerHMM_glimmerT_31343-T1 Valid prediction for CodingQuarry_transcript_10476-T1 Valid prediction for GeneMark_model.54104_t Valid prediction for GeneMark_model.54108_t Valid prediction for GeneMark_model.54137_t Valid prediction for GlimmerHMM_glimmerT_31356-T1 Couldn't classify 63806, 63853 Sorry, prediction pasa_asmbl_8320.p1 fails validation. (CTG) AG 63806-63853 GT AGG (TTG) AG 63964-64178 GT AGG (ACT) AG 64603-64770 GT AGG (GCT) AG 64900-65035 GT AGG (GTC) AG 65625-65785 GT AGG (ATT) AG 65881-66010 GT CCG (GAC) AG 66150-66260 GT AGG (GTG) AG 66379-66651 GT AGG (GTG) AG 66866-67066 GT ATG (ATT) AG 67305-67422 GT CGG (GAA) AG 67566-67730 GT GGG (GCT) AG 67996-68096 AC GAA add_exon() Sorry, pasa_asmbl_8320.p1 63964-64178-terminal-2 is invalid. -recovered pasa_asmbl_8320.p1, terminal, 63964, 64178 -recovered pasa_asmbl_8320.p1, terminal, 67996, 68096 -recovered pasa_asmbl_8320.p1, internal, 63806, 63853 -recovered pasa_asmbl_8320.p1, internal, 63964, 64178 -recovered pasa_asmbl_8320.p1, internal, 64603, 64770 -recovered pasa_asmbl_8320.p1, internal, 64900, 65035 -recovered pasa_asmbl_8320.p1, internal, 65625, 65785 -recovered pasa_asmbl_8320.p1, internal, 65881, 66010 -recovered pasa_asmbl_8320.p1, internal, 66150, 66260 -recovered pasa_asmbl_8320.p1, internal, 66379, 66651 -recovered pasa_asmbl_8320.p1, internal, 66866, 67066 -recovered pasa_asmbl_8320.p1, internal, 67305, 67422 -recovered pasa_asmbl_8320.p1, internal, 67566, 67730 Valid prediction for GeneMark_model.54090_t Valid prediction for snap_scaffold_12-snap.3005-T1 Valid prediction for HiQ_model.g20904.t1 Valid prediction for Augustus_model.g20897.t1 Valid prediction for snap_scaffold_12-snap.3020-T1 Valid prediction for GeneMark_model.54146_t Valid prediction for GeneMark_model.54106_t Valid prediction for snap_scaffold_12-snap.3000-T1 Valid prediction for snap_scaffold_12-snap.3024-T1 Valid prediction for GeneMark_model.54139_t Valid prediction for snap_scaffold_12-snap.3001-T1 Valid prediction for GeneMark_model.54135_t Valid prediction for GeneMark_model.54098_t Valid prediction for snap_scaffold_12-snap.2984-T1 Valid prediction for GeneMark_model.54123_t Valid prediction for GeneMark_model.54149_t Valid prediction for pasa_asmbl_8237.p1 Valid prediction for HiQ_model.g20911.t1 Valid prediction for snap_scaffold_12-snap.3029-T1 Valid prediction for GlimmerHMM_glimmerT_31351-T1 Valid prediction for GeneMark_model.54088_t Valid prediction for pasa_asmbl_8232.p1 Valid prediction for Augustus_model.g20898.t1 Valid prediction for snap_scaffold_12-snap.3012-T1 Valid prediction for GeneMark_model.54150_t Valid prediction for snap_scaffold_12-snap.3009-T1 Valid prediction for GeneMark_model.54141_t Valid prediction for GeneMark_model.54133_t Valid prediction for GlimmerHMM_glimmerT_31357-T1 Valid prediction for pasa_asmbl_8230.p1 Valid prediction for snap_scaffold_12-snap.3037-T1 Valid prediction for snap_scaffold_12-snap.3035-T1 Valid prediction for snap_scaffold_12-snap.3028-T1 Valid prediction for snap_scaffold_12-snap.2985-T1 Valid prediction for Augustus_model.g20894.t1 Valid prediction for snap_scaffold_12-snap.3031-T1 Valid prediction for snap_scaffold_12-snap.2992-T1 Valid prediction for CodingQuarry_transcript_10469-T1 Valid prediction for GeneMark_model.54100_t Valid prediction for HiQ_model.g20910.t1 Valid prediction for CodingQuarry_transcript_10474-T1 Valid prediction for GeneMark_model.54112_t Valid prediction for GlimmerHMM_glimmerT_31349-T1 Valid prediction for GlimmerHMM_glimmerT_31364-T1 Valid prediction for GeneMark_model.54158_t Valid prediction for GlimmerHMM_glimmerT_31372-T1 Valid prediction for GlimmerHMM_glimmerT_31359-T1 Valid prediction for snap_scaffold_12-snap.3041-T1 Valid prediction for snap_scaffold_12-snap.2983-T1 Valid prediction for Augustus_model.g20912.t1 Valid prediction for GeneMark_model.54148_t Valid prediction for GeneMark_model.54165_t Valid prediction for snap_scaffold_12-snap.3013-T1 Valid prediction for GeneMark_model.54119_t Valid prediction for snap_scaffold_12-snap.2987-T1 Couldn't classify 260057, 260080 Couldn't classify 269010, 269015 Sorry, prediction pasa_asmbl_8228.p1 fails validation. (ATC) CC 260057-260080 GT AGG (GAA) AG 262809-262934 GT GGG (CTG) AG 263132-263242 GT GAG (GGC) AG 263769-263859 GT AGG (TGG) AG 264120-264250 GT GGG (AGT) AG 264598-264652 GT ACG (CCC) AG 265104-265182 GT TGG (GTC) AG 265994-266169 GT AGG (ATG) AG 267899-267971 GT AGG (TTC) AG 268485-268689 GT ACG (CAG) AG 269010-269015 AG AGA add_exon() Sorry, pasa_asmbl_8228.p1 267899-267971-initial-1 is invalid. -recovered pasa_asmbl_8228.p1, initial, 267899, 267971 add_exon() Sorry, pasa_asmbl_8228.p1 263769-263859-terminal-3 is invalid. -recovered pasa_asmbl_8228.p1, terminal, 263769, 263859 -recovered pasa_asmbl_8228.p1, internal, 262809, 262934 -recovered pasa_asmbl_8228.p1, internal, 263132, 263242 -recovered pasa_asmbl_8228.p1, internal, 263769, 263859 -recovered pasa_asmbl_8228.p1, internal, 264120, 264250 -recovered pasa_asmbl_8228.p1, internal, 264598, 264652 -recovered pasa_asmbl_8228.p1, internal, 265104, 265182 -recovered pasa_asmbl_8228.p1, internal, 265994, 266169 -recovered pasa_asmbl_8228.p1, internal, 267899, 267971 -recovered pasa_asmbl_8228.p1, internal, 268485, 268689 Valid prediction for snap_scaffold_12-snap.3003-T1 Valid prediction for Augustus_model.g20908.t1 Valid prediction for snap_scaffold_12-snap.3027-T1 Valid prediction for CodingQuarry_transcript_10468-T1 Valid prediction for CodingQuarry_transcript_10472-T1 Valid prediction for CodingQuarry_transcript_10473-T1 Couldn't classify 86788, 86891 Sorry, prediction pasa_asmbl_8229.p1 fails validation. (ACG) AG 86788-86891 GT AGG (AAA) AG 87640-87771 GT AGG (CTT) AG 87999-88103 GT CGG (TTA) AG 88212-88274 GT AGG (CTC) AG 88414-88548 GT AGG (ACA) AG 88829-88978 GT ATG (AGA) AG 89314-89413 GT AGG (GAG) AG 89582-89644 CT AGC add_exon() Sorry, pasa_asmbl_8229.p1 86788-86891-terminal-2 is invalid. -recovered pasa_asmbl_8229.p1, terminal, 86788, 86891 -recovered pasa_asmbl_8229.p1, terminal, 89582, 89644 -recovered pasa_asmbl_8229.p1, internal, 86788, 86891 -recovered pasa_asmbl_8229.p1, internal, 87640, 87771 -recovered pasa_asmbl_8229.p1, internal, 87999, 88103 -recovered pasa_asmbl_8229.p1, internal, 88212, 88274 -recovered pasa_asmbl_8229.p1, internal, 88414, 88548 -recovered pasa_asmbl_8229.p1, internal, 88829, 88978 -recovered pasa_asmbl_8229.p1, internal, 89314, 89413 Valid prediction for Augustus_model.g20905.t1 Valid prediction for snap_scaffold_12-snap.2996-T1 -loading the search evidence (protein and EST search results, strand: -) -scoring exons (strand: -)Error with prediction: snap lend_intergenic: 16636, rend_intergenic: 1893 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 20957, rend_intergenic: 19970 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 32730, rend_intergenic: 28856 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 40746, rend_intergenic: 37752 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 42782, rend_intergenic: 40880 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 43645, rend_intergenic: 42847 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 49109, rend_intergenic: 43786 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 62508, rend_intergenic: 49167 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 65309, rend_intergenic: 62995 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 75634, rend_intergenic: 66798 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 86711, rend_intergenic: 75773 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 103854, rend_intergenic: 87527 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 113507, rend_intergenic: 113361 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 115188, rend_intergenic: 113664 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 118353, rend_intergenic: 116100 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 133137, rend_intergenic: 120454 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 140995, rend_intergenic: 133168 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 143814, rend_intergenic: 141930 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 153201, rend_intergenic: 144316 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 162269, rend_intergenic: 154582 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 184919, rend_intergenic: 176010 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 199833, rend_intergenic: 195498 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 219878, rend_intergenic: 209286 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 225560, rend_intergenic: 221095 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 254059, rend_intergenic: 248328 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 273902, rend_intergenic: 269238 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -building DP trellis -building trellis in range 1 - 276330 -exon list size: 1250 building trellis 0.1 0.2 0.2 0.3 0.4 0.5 0.6 0.6 0.7 0.8 0.9 1.0 1.0 1.1 1.2 1.3 1.4 1.4 1.5 1.6 1.7 1.8 1.8 1.9 2.0 2.1 2.2 2.2 2.3 2.4 2.5 2.6 2.6 2.7 2.8 2.9 3.0 3.0 3.1 3.2 3.3 3.4 3.4 3.5 3.6 3.7 3.8 3.8 3.9 4.0 4.1 4.2 4.2 4.3 4.4 4.5 4.6 4.6 4.7 4.8 4.9 5.0 5.0 5.1 5.2 5.3 5.4 5.4 5.5 5.6 5.7 5.8 5.8 5.9 6.0 6.1 6.2 6.2 6.3 6.4 6.5 6.5 6.6 6.7 6.8 6.9 6.9 7.0 7.1 7.2 7.3 7.3 7.4 7.5 7.6 7.7 7.7 7.8 7.9 8.0 8.1 8.1 8.2 8.3 8.4 8.5 8.5 8.6 8.7 8.8 8.9 8.9 9.0 9.1 9.2 9.3 9.3 9.4 9.5 9.6 9.7 9.7 9.8 9.9 10.0 10.1 10.1 10.2 10.3 10.4 10.5 10.5 10.6 10.7 10.8 10.9 10.9 11.0 11.1 11.2 11.3 11.3 11.4 11.5 11.6 11.7 11.7 11.8 11.9 12.0 12.1 12.1 12.2 12.3 12.4 12.5 12.5 12.6 12.7 12.8 12.9 12.9 13.0 13.1 13.2 13.3 13.3 13.4 13.5 13.6 13.7 13.7 13.8 13.9 14.0 14.1 14.1 14.2 14.3 14.4 14.5 14.5 14.6 14.7 14.8 14.9 14.9 15.0 15.1 15.2 15.3 15.3 15.4 15.5 15.6 15.7 15.7 15.8 15.9 16.0 16.1 16.1 16.2 16.3 16.4 16.5 16.5 16.6 16.7 16.8 16.9 16.9 17.0 17.1 17.2 17.3 17.3 17.4 17.5 17.6 17.7 17.7 17.8 17.9 18.0 18.1 18.1 18.2 18.3 18.4 18.5 18.5 18.6 18.7 18.8 18.8 18.9 19.0 19.1 19.2 19.2 19.3 19.4 19.5 19.6 19.6 19.7 19.8 19.9 20.0 20.0 20.1 20.2 20.3 20.4 20.4 20.5 20.6 20.7 20.8 20.8 20.9 21.0 21.1 21.2 21.2 21.3 21.4 21.5 21.6 21.6 21.7 21.8 21.9 22.0 22.0 22.1 22.2 22.3 22.4 22.4 22.5 22.6 22.7 22.8 22.8 22.9 23.0 23.1 23.2 23.2 23.3 23.4 23.5 23.6 23.6 23.7 23.8 23.9 24.0 24.0 24.1 24.2 24.3 24.4 24.4 24.5 24.6 24.7 24.8 24.8 24.9 25.0 25.1 25.2 25.2 25.3 25.4 25.5 25.6 25.6 25.7 25.8 25.9 26.0 26.0 26.1 26.2 26.3 26.4 26.4 26.5 26.6 26.7 26.8 26.8 26.9 27.0 27.1 27.2 27.2 27.3 27.4 27.5 27.6 27.6 27.7 27.8 27.9 28.0 28.0 28.1 28.2 28.3 28.4 28.4 28.5 28.6 28.7 28.8 28.8 28.9 29.0 29.1 29.2 29.2 29.3 29.4 29.5 29.6 29.6 29.7 29.8 29.9 30.0 30.0 30.1 30.2 30.3 30.4 30.4 30.5 30.6 30.7 30.8 30.8 30.9 31.0 31.1 31.2 31.2 31.3 31.4 31.5 31.5 31.6 31.7 31.8 31.9 31.9 32.0 32.1 32.2 32.3 32.3 32.4 32.5 32.6 32.7 32.7 32.8 32.9 33.0 33.1 33.1 33.2 33.3 33.4 33.5 33.5 33.6 33.7 33.8 33.9 33.9 34.0 34.1 34.2 34.3 34.3 34.4 34.5 34.6 34.7 34.7 34.8 34.9 35.0 35.1 35.1 35.2 35.3 35.4 35.5 35.5 35.6 35.7 35.8 35.9 35.9 36.0 36.1 36.2 36.3 36.3 36.4 36.5 36.6 36.7 36.7 36.8 36.9 37.0 37.1 37.1 37.2 37.3 37.4 37.5 37.5 37.6 37.7 37.8 37.9 37.9 38.0 38.1 38.2 38.3 38.3 38.4 38.5 38.6 38.7 38.7 38.8 38.9 39.0 39.1 39.1 39.2 39.3 39.4 39.5 39.5 39.6 39.7 39.8 39.9 39.9 40.0 40.1 40.2 40.3 40.3 40.4 40.5 40.6 40.7 40.7 40.8 40.9 41.0 41.1 41.1 41.2 41.3 41.4 41.5 41.5 41.6 41.7 41.8 41.9 41.9 42.0 42.1 42.2 42.3 42.3 42.4 42.5 42.6 42.7 42.7 42.8 42.9 43.0 43.1 43.1 43.2 43.3 43.4 43.5 43.5 43.6 43.7 43.8 43.8 43.9 44.0 44.1 44.2 44.2 44.3 44.4 44.5 44.6 44.6 44.7 44.8 44.9 45.0 45.0 45.1 45.2 45.3 45.4 45.4 45.5 45.6 45.7 45.8 45.8 45.9 46.0 46.1 46.2 46.2 46.3 46.4 46.5 46.6 46.6 46.7 46.8 46.9 47.0 47.0 47.1 47.2 47.3 47.4 47.4 47.5 47.6 47.7 47.8 47.8 47.9 48.0 48.1 48.2 48.2 48.3 48.4 48.5 48.6 48.6 48.7 48.8 48.9 49.0 49.0 49.1 49.2 49.3 49.4 49.4 49.5 49.6 49.7 49.8 49.8 49.9 50.0 50.1 50.2 50.2 50.3 50.4 50.5 50.6 50.6 50.7 50.8 50.9 51.0 51.0 51.1 51.2 51.3 51.4 51.4 51.5 51.6 51.7 51.8 51.8 51.9 52.0 52.1 52.2 52.2 52.3 52.4 52.5 52.6 52.6 52.7 52.8 52.9 53.0 53.0 53.1 53.2 53.3 53.4 53.4 53.5 53.6 53.7 53.8 53.8 53.9 54.0 54.1 54.2 54.2 54.3 54.4 54.5 54.6 54.6 54.7 54.8 54.9 55.0 55.0 55.1 55.2 55.3 55.4 55.4 55.5 55.6 55.7 55.8 55.8 55.9 56.0 56.1 56.2 56.2 56.3 56.4 56.5 56.5 56.6 56.7 56.8 56.9 56.9 57.0 57.1 57.2 57.3 57.3 57.4 57.5 57.6 57.7 57.7 57.8 57.9 58.0 58.1 58.1 58.2 58.3 58.4 58.5 58.5 58.6 58.7 58.8 58.9 58.9 59.0 59.1 59.2 59.3 59.3 59.4 59.5 59.6 59.7 59.7 59.8 59.9 60.0 60.1 60.1 60.2 60.3 60.4 60.5 60.5 60.6 60.7 60.8 60.9 60.9 61.0 61.1 61.2 61.3 61.3 61.4 61.5 61.6 61.7 61.7 61.8 61.9 62.0 62.1 62.1 62.2 62.3 62.4 62.5 62.5 62.6 62.7 62.8 62.9 62.9 63.0 63.1 63.2 63.3 63.3 63.4 63.5 63.6 63.7 63.7 63.8 63.9 64.0 64.1 64.1 64.2 64.3 64.4 64.5 64.5 64.6 64.7 64.8 64.9 64.9 65.0 65.1 65.2 65.3 65.3 65.4 65.5 65.6 65.7 65.7 65.8 65.9 66.0 66.1 66.1 66.2 66.3 66.4 66.5 66.5 66.6 66.7 66.8 66.9 66.9 67.0 67.1 67.2 67.3 67.3 67.4 67.5 67.6 67.7 67.7 67.8 67.9 68.0 68.1 68.1 68.2 68.3 68.4 68.5 68.5 68.6 68.7 68.8 68.8 68.9 69.0 69.1 69.2 69.2 69.3 69.4 69.5 69.6 69.6 69.7 69.8 69.9 70.0 70.0 70.1 70.2 70.3 70.4 70.4 70.5 70.6 70.7 70.8 70.8 70.9 71.0 71.1 71.2 71.2 71.3 71.4 71.5 71.6 71.6 71.7 71.8 71.9 72.0 72.0 72.1 72.2 72.3 72.4 72.4 72.5 72.6 72.7 72.8 72.8 72.9 73.0 73.1 73.2 73.2 73.3 73.4 73.5 73.6 73.6 73.7 73.8 73.9 74.0 74.0 74.1 74.2 74.3 74.4 74.4 74.5 74.6 74.7 74.8 74.8 74.9 75.0 75.1 75.2 75.2 75.3 75.4 75.5 75.6 75.6 75.7 75.8 75.9 76.0 76.0 76.1 76.2 76.3 76.4 76.4 76.5 76.6 76.7 76.8 76.8 76.9 77.0 77.1 77.2 77.2 77.3 77.4 77.5 77.6 77.6 77.7 77.8 77.9 78.0 78.0 78.1 78.2 78.3 78.4 78.4 78.5 78.6 78.7 78.8 78.8 78.9 79.0 79.1 79.2 79.2 79.3 79.4 79.5 79.6 79.6 79.7 79.8 79.9 80.0 80.0 80.1 80.2 80.3 80.4 80.4 80.5 80.6 80.7 80.8 80.8 80.9 81.0 81.1 81.2 81.2 81.3 81.4 81.5 81.5 81.6 81.7 81.8 81.9 81.9 82.0 82.1 82.2 82.3 82.3 82.4 82.5 82.6 82.7 82.7 82.8 82.9 83.0 83.1 83.1 83.2 83.3 83.4 83.5 83.5 83.6 83.7 83.8 83.9 83.9 84.0 84.1 84.2 84.3 84.3 84.4 84.5 84.6 84.7 84.7 84.8 84.9 85.0 85.1 85.1 85.2 85.3 85.4 85.5 85.5 85.6 85.7 85.8 85.9 85.9 86.0 86.1 86.2 86.3 86.3 86.4 86.5 86.6 86.7 86.7 86.8 86.9 87.0 87.1 87.1 87.2 87.3 87.4 87.5 87.5 87.6 87.7 87.8 87.9 87.9 88.0 88.1 88.2 88.3 88.3 88.4 88.5 88.6 88.7 88.7 88.8 88.9 89.0 89.1 89.1 89.2 89.3 89.4 89.5 89.5 89.6 89.7 89.8 89.9 89.9 90.0 90.1 90.2 90.3 90.3 90.4 90.5 90.6 90.7 90.7 90.8 90.9 91.0 91.1 91.1 91.2 91.3 91.4 91.5 91.5 91.6 91.7 91.8 91.9 91.9 92.0 92.1 92.2 92.3 92.3 92.4 92.5 92.6 92.7 92.7 92.8 92.9 93.0 93.1 93.1 93.2 93.3 93.4 93.5 93.5 93.6 93.7 93.8 93.8 93.9 94.0 94.1 94.2 94.2 94.3 94.4 94.5 94.6 94.6 94.7 94.8 94.9 95.0 95.0 95.1 95.2 95.3 95.4 95.4 95.5 95.6 95.7 95.8 95.8 95.9 96.0 96.1 96.2 96.2 96.3 96.4 96.5 96.6 96.6 96.7 96.8 96.9 97.0 97.0 97.1 97.2 97.3 97.4 97.4 97.5 97.6 97.7 97.8 97.8 97.9 98.0 98.1 98.2 98.2 98.3 98.4 98.5 98.6 98.6 98.7 98.8 98.9 99.0 99.0 99.1 99.2 99.3 99.4 99.4 99.5 99.6 99.7 99.8 99.8 99.9 -found 60 predictions from path traversal Error with prediction: snap lend_intergenic: 16636, rend_intergenic: 1893 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 20957, rend_intergenic: 19970 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 32730, rend_intergenic: 28856 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 40746, rend_intergenic: 37752 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 42782, rend_intergenic: 40880 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 43645, rend_intergenic: 42847 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 49109, rend_intergenic: 43786 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 62508, rend_intergenic: 49167 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 65309, rend_intergenic: 62995 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 75634, rend_intergenic: 66798 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 86711, rend_intergenic: 75773 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 103854, rend_intergenic: 87527 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 113507, rend_intergenic: 113361 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 115188, rend_intergenic: 113664 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 118353, rend_intergenic: 116100 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 133137, rend_intergenic: 120454 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 140995, rend_intergenic: 133168 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 143814, rend_intergenic: 141930 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 153201, rend_intergenic: 144316 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 162269, rend_intergenic: 154582 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 184919, rend_intergenic: 176010 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 199833, rend_intergenic: 195498 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 219878, rend_intergenic: 209286 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 225560, rend_intergenic: 221095 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 254059, rend_intergenic: 248328 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 273902, rend_intergenic: 269238 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -reporting highest scoring path thru the trellis. -found 29 predictions persist after filtering for low support