-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_12/scaffold_12_14144063-14304411 -reading genomic sequence. ** Processing features (+) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: +) -loading gene prediction evidence. (strand: +)Valid prediction for snap_scaffold_12-snap.2703-T1 Valid prediction for GeneMark_model.53726_t Valid prediction for GeneMark_model.53750_t Valid prediction for snap_scaffold_12-snap.2699-T1 Valid prediction for snap_scaffold_12-snap.2676-T1 Valid prediction for GeneMark_model.53720_t Valid prediction for snap_scaffold_12-snap.2685-T1 Valid prediction for GlimmerHMM_glimmerT_31126-T1 Valid prediction for pasa_asmbl_9037.p1 Valid prediction for CodingQuarry_transcript_10435-T1 Valid prediction for Augustus_model.g20750.t1 Valid prediction for snap_scaffold_12-snap.2675-T1 Valid prediction for GlimmerHMM_glimmerT_31098-T1 Valid prediction for GeneMark_model.53748_t Valid prediction for snap_scaffold_12-snap.2700-T1 Valid prediction for Augustus_model.g20748.t1 Valid prediction for GeneMark_model.53732_t Valid prediction for snap_scaffold_12-snap.2697-T1 Couldn't classify 120126, 120200 Sorry, prediction pasa_asmbl_9045.p1 fails validation. (ACT) AG 120126-120200 GT AGG (ATC) AG 120335-120434 GT GAG (AAA) AG 120890-120964 GT GAG (CCA) AG 121068-121138 GT AGG (CAT) AG 121211-121319 GT CAG (CTG) AG 121535-121608 GT GGG (ATT) AG 121688-121822 GT AGG (GGA) AG 122628-122738 GT AGG (AAG) AG 124692-124769 AG AGA -recovered pasa_asmbl_9045.p1, terminal, 124692, 124769 -recovered pasa_asmbl_9045.p1, internal, 120126, 120200 -recovered pasa_asmbl_9045.p1, internal, 120335, 120434 -recovered pasa_asmbl_9045.p1, internal, 120890, 120964 -recovered pasa_asmbl_9045.p1, internal, 121068, 121138 -recovered pasa_asmbl_9045.p1, internal, 121211, 121319 -recovered pasa_asmbl_9045.p1, internal, 121535, 121608 -recovered pasa_asmbl_9045.p1, internal, 121688, 121822 -recovered pasa_asmbl_9045.p1, internal, 122628, 122738 Valid prediction for GeneMark_model.53744_t Valid prediction for GlimmerHMM_glimmerT_31120-T1 Valid prediction for snap_scaffold_12-snap.2677-T1 Valid prediction for GeneMark_model.53714_t Valid prediction for GeneMark_model.53751_t Valid prediction for GlimmerHMM_glimmerT_31102-T1 Valid prediction for GeneMark_model.53743_t Couldn't classify 24839, 24897 Couldn't classify 26828, 26920 Sorry, prediction pasa_asmbl_9029.p1 fails validation. (TTC) CA 24839-24897 GT AGG (GTA) AG 25297-25429 GT GGG (TCT) AG 25625-25733 GT GGG (AGA) AG 25841-25947 GT AGG (TTG) AG 26828-26920 AT GGA -recovered pasa_asmbl_9029.p1, internal, 25297, 25429 -recovered pasa_asmbl_9029.p1, internal, 25625, 25733 -recovered pasa_asmbl_9029.p1, internal, 25841, 25947 Valid prediction for snap_scaffold_12-snap.2711-T1 Valid prediction for GeneMark_model.53753_t Valid prediction for Augustus_model.g20761.t1 Valid prediction for snap_scaffold_12-snap.2674-T1 Valid prediction for GeneMark_model.53723_t Couldn't classify 133862, 133897 Sorry, prediction pasa_asmbl_9053.p1 fails validation. (AGA) AC 133862-133897 GT GGG (ATC) AG 134014-134046 GT CGG (AAA) AG 134152-135218 GT TGG (GAG) AG 135324-135487 GT AGG (GGC) AG 135624-135770 GT AGG (GCT) AG 135900-136115 GT AGG (GCT) AG 136383-136564 AA AGA -recovered pasa_asmbl_9053.p1, terminal, 136383, 136564 -recovered pasa_asmbl_9053.p1, internal, 134014, 134046 -recovered pasa_asmbl_9053.p1, internal, 134152, 135218 -recovered pasa_asmbl_9053.p1, internal, 135324, 135487 -recovered pasa_asmbl_9053.p1, internal, 135624, 135770 -recovered pasa_asmbl_9053.p1, internal, 135900, 136115 Valid prediction for snap_scaffold_12-snap.2704-T1 Valid prediction for GeneMark_model.53724_t Valid prediction for Augustus_model.g20768.t1 Valid prediction for Augustus_model.g20763.t1 Couldn't classify 132458, 132517 Sorry, prediction pasa_asmbl_9051.p1 fails validation. (ATG) TC 128862-128897 GT TGG (CGA) AG 129612-129750 GT AGG (ACT) AG 129919-129997 GT GAG (GAT) AG 130112-130158 GT AGG (GCA) AG 130396-130574 GT CGG (GTG) AG 130688-130794 GT AAG (GTA) AG 130940-131033 GT AGG (GTG) AG 131149-131302 GT AGG (GCT) AG 131474-131589 GT GGG (GTG) AG 131679-131805 GT TGG (GGC) AG 131912-132222 GT GGG (GCT) AG 132458-132517 GT TCG -recovered pasa_asmbl_9051.p1, initial, 128862, 128897 add_exon() Sorry, pasa_asmbl_9051.p1 130112-130158-terminal-2 is invalid. -recovered pasa_asmbl_9051.p1, terminal, 130112, 130158 -recovered pasa_asmbl_9051.p1, internal, 129612, 129750 -recovered pasa_asmbl_9051.p1, internal, 129919, 129997 -recovered pasa_asmbl_9051.p1, internal, 130112, 130158 -recovered pasa_asmbl_9051.p1, internal, 130396, 130574 -recovered pasa_asmbl_9051.p1, internal, 130688, 130794 -recovered pasa_asmbl_9051.p1, internal, 130940, 131033 -recovered pasa_asmbl_9051.p1, internal, 131149, 131302 -recovered pasa_asmbl_9051.p1, internal, 131474, 131589 -recovered pasa_asmbl_9051.p1, internal, 131679, 131805 -recovered pasa_asmbl_9051.p1, internal, 131912, 132222 -recovered pasa_asmbl_9051.p1, internal, 132458, 132517 Valid prediction for snap_scaffold_12-snap.2692-T1 Valid prediction for CodingQuarry_transcript_10436-T1 Valid prediction for pasa_asmbl_9036.p1 Valid prediction for CodingQuarry_transcript_10434-T1 Valid prediction for GeneMark_model.53756_t Valid prediction for GeneMark_model.53738_t Valid prediction for GlimmerHMM_glimmerT_31101-T1 Valid prediction for GlimmerHMM_glimmerT_31114-T1 Valid prediction for GlimmerHMM_glimmerT_31115-T1 Valid prediction for GeneMark_model.53711_t Valid prediction for snap_scaffold_12-snap.2678-T1 Valid prediction for GeneMark_model.53741_t Valid prediction for Augustus_model.g20766.t1 Valid prediction for HiQ_model.g20751.t1 Valid prediction for CodingQuarry_transcript_10429-T1 Valid prediction for snap_scaffold_12-snap.2691-T1 Valid prediction for snap_scaffold_12-snap.2688-T1 Valid prediction for GlimmerHMM_glimmerT_31106-T1 Valid prediction for pasa_asmbl_9039.p1 Valid prediction for CodingQuarry_transcript_10432-T1 Valid prediction for snap_scaffold_12-snap.2702-T1 Valid prediction for HiQ_model.g20760.t1 Valid prediction for Augustus_model.g20762.t1 Valid prediction for HiQ_model.g20757.t1 Valid prediction for GlimmerHMM_glimmerT_31117-T1 Valid prediction for snap_scaffold_12-snap.2694-T1 Valid prediction for snap_scaffold_12-snap.2682-T1 Valid prediction for snap_scaffold_12-snap.2709-T1 Couldn't classify 17213, 17404 Sorry, prediction pasa_asmbl_9026.p1 fails validation. (CTG) AC 17213-17404 GT AGG (GTG) AG 17529-17636 GT GGG (GTG) AG 17844-17963 GT GGG (GTG) AG 18244-18381 GT AGG (CTG) AG 18917-19612 AG AGA -recovered pasa_asmbl_9026.p1, terminal, 18917, 19612 -recovered pasa_asmbl_9026.p1, internal, 17529, 17636 -recovered pasa_asmbl_9026.p1, internal, 17844, 17963 -recovered pasa_asmbl_9026.p1, internal, 18244, 18381 Valid prediction for Augustus_model.g20746.t1 Valid prediction for GlimmerHMM_glimmerT_31123-T1 Valid prediction for Augustus_model.g20759.t1 Valid prediction for HiQ_model.g20754.t1 Valid prediction for Augustus_model.g20744.t1 Valid prediction for GeneMark_model.53736_t Valid prediction for GeneMark_model.53740_t Valid prediction for GeneMark_model.53746_t Valid prediction for GeneMark_model.53734_t Valid prediction for GeneMark_model.53754_t Couldn't classify 79972, 80048 Couldn't classify 82395, 82529 Sorry, prediction CodingQuarry_transcript_10433-T1 fails validation. (ATG) TA 74392-74445 GT GGG (AAT) AG 74601-74786 GT CGG (GAC) AG 76997-77102 GT TGG (GAC) AG 77707-77900 GT AGG (GCG) AG 78225-78325 GT AGG (GTA) AG 78472-78601 GT TGG (ATC) AG 78767-78870 GT GAG (GGA) AG 79277-79405 GT GGG (CCA) AG 79523-79744 GT AGG (AGA) AG 79972-80048 GG GAG (AGG) GC 82395-82529 GT CGG (ATG) AG 82659-82701 GT GAG (GTA) AG 82885-83008 GT AGG (AAG) AG 83187-83354 GT AGG (GAG) AG 83507-83604 GT AAG (GGA) AG 83773-83980 GT AGG (GAG) AG 84378-84443 AG GAA -recovered CodingQuarry_transcript_10433-T1, initial, 74392, 74445 -recovered CodingQuarry_transcript_10433-T1, initial, 82659, 82701 -recovered CodingQuarry_transcript_10433-T1, terminal, 79972, 80048 -recovered CodingQuarry_transcript_10433-T1, terminal, 84378, 84443 -recovered CodingQuarry_transcript_10433-T1, internal, 74601, 74786 -recovered CodingQuarry_transcript_10433-T1, internal, 76997, 77102 -recovered CodingQuarry_transcript_10433-T1, internal, 77707, 77900 -recovered CodingQuarry_transcript_10433-T1, internal, 78225, 78325 -recovered CodingQuarry_transcript_10433-T1, internal, 78472, 78601 -recovered CodingQuarry_transcript_10433-T1, internal, 78767, 78870 -recovered CodingQuarry_transcript_10433-T1, internal, 79277, 79405 -recovered CodingQuarry_transcript_10433-T1, internal, 79523, 79744 -recovered CodingQuarry_transcript_10433-T1, internal, 82659, 82701 -recovered CodingQuarry_transcript_10433-T1, internal, 82885, 83008 -recovered CodingQuarry_transcript_10433-T1, internal, 83187, 83354 -recovered CodingQuarry_transcript_10433-T1, internal, 83507, 83604 -recovered CodingQuarry_transcript_10433-T1, internal, 83773, 83980 Valid prediction for Augustus_model.g20755.t1 Valid prediction for snap_scaffold_12-snap.2706-T1 Valid prediction for pasa_asmbl_9040.p1 Valid prediction for GlimmerHMM_glimmerT_31105-T1 Valid prediction for GlimmerHMM_glimmerT_31119-T1 Valid prediction for GlimmerHMM_glimmerT_31124-T1 Valid prediction for snap_scaffold_12-snap.2672-T1 Valid prediction for snap_scaffold_12-snap.2684-T1 Valid prediction for GeneMark_model.53715_t Valid prediction for snap_scaffold_12-snap.2693-T1 Valid prediction for snap_scaffold_12-snap.2690-T1 Valid prediction for GlimmerHMM_glimmerT_31100-T1 Couldn't classify 35037, 35205 Sorry, prediction pasa_asmbl_9035.p1 fails validation. (ATG) AC 34082-34284 GT AAG (TTT) AG 34411-34516 GT AGG (GAG) AG 34826-34926 GT TGG (GCG) AG 35037-35205 AT GCA -recovered pasa_asmbl_9035.p1, initial, 34082, 34284 -recovered pasa_asmbl_9035.p1, internal, 34411, 34516 -recovered pasa_asmbl_9035.p1, internal, 34826, 34926 Valid prediction for GeneMark_model.53758_t Valid prediction for GeneMark_model.53716_t Valid prediction for GeneMark_model.53728_t Valid prediction for snap_scaffold_12-snap.2681-T1 Couldn't classify 27658, 27854 Sorry, prediction pasa_asmbl_9030.p2 fails validation. (CTA) TC 27658-27854 GT GTG (ATC) AG 28175-28280 GT GAG -recovered pasa_asmbl_9030.p2, terminal, 28175, 28280 -recovered pasa_asmbl_9030.p2, internal, 28175, 28280 Valid prediction for Augustus_model.g20745.t1 Couldn't classify 139017, 139041 Couldn't classify 142453, 142484 Sorry, prediction pasa_asmbl_9055.p1 fails validation. (CAC) CG 139017-139041 GT AGG (TTT) AG 139160-139284 GC AGG (GCC) AG 139446-139491 GT GGG (TAC) AG 139769-139912 GT AGG (AGA) AG 140029-140218 GT AGG (GAA) AG 140339-140405 GT AGG (GTT) AG 140544-140625 GT GGG (GAT) AG 140726-140787 GT GGG (AGT) AG 140882-141012 GT AAG (GTT) AG 141116-141273 GT AGG (AGA) AG 142453-142484 GT GAG add_exon() Sorry, pasa_asmbl_9055.p1 141116-141273-terminal-2 is invalid. -recovered pasa_asmbl_9055.p1, terminal, 141116, 141273 -recovered pasa_asmbl_9055.p1, internal, 139160, 139284 -recovered pasa_asmbl_9055.p1, internal, 139446, 139491 -recovered pasa_asmbl_9055.p1, internal, 139769, 139912 -recovered pasa_asmbl_9055.p1, internal, 140029, 140218 -recovered pasa_asmbl_9055.p1, internal, 140339, 140405 -recovered pasa_asmbl_9055.p1, internal, 140544, 140625 -recovered pasa_asmbl_9055.p1, internal, 140726, 140787 -recovered pasa_asmbl_9055.p1, internal, 140882, 141012 -recovered pasa_asmbl_9055.p1, internal, 141116, 141273 -recovered pasa_asmbl_9055.p1, internal, 142453, 142484 Valid prediction for HiQ_model.g20747.t1 Valid prediction for snap_scaffold_12-snap.2708-T1 Valid prediction for GlimmerHMM_glimmerT_31122-T1 -loading the search evidence (protein and EST search results, strand: +) -scoring exons (strand: +) ** Processing features (-) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: -) -loading gene prediction evidence. (strand: -)Couldn't classify 116203, 116310 Sorry, prediction pasa_asmbl_8123.p1 fails validation. (ACA) AC 116203-116310 GT TGG (CTG) AG 117340-117432 GT AGG (CTG) AG 117561-117694 GT AGG (TAA) AG 117862-117986 GT GAG (AAG) AG 118122-118268 GT CCG (CCT) AG 118478-118513 GT AGG (TGG) AG 118639-118774 GT AGG (GCA) AG 119041-119161 GT AGG (ATC) AG 119268-119341 GT GTG (GTA) AG 119640-119763 GT GGG (ATT) AG 120370-120567 GA AGG -recovered pasa_asmbl_8123.p1, terminal, 120370, 120567 -recovered pasa_asmbl_8123.p1, internal, 117340, 117432 -recovered pasa_asmbl_8123.p1, internal, 117561, 117694 -recovered pasa_asmbl_8123.p1, internal, 117862, 117986 -recovered pasa_asmbl_8123.p1, internal, 118122, 118268 -recovered pasa_asmbl_8123.p1, internal, 118478, 118513 -recovered pasa_asmbl_8123.p1, internal, 118639, 118774 -recovered pasa_asmbl_8123.p1, internal, 119041, 119161 -recovered pasa_asmbl_8123.p1, internal, 119268, 119341 -recovered pasa_asmbl_8123.p1, internal, 119640, 119763 Couldn't classify 113139, 113230 Sorry, prediction pasa_asmbl_8128.p1 fails validation. (ATG) TC 111152-111305 GT AGG (AGA) AG 111708-111891 GT AGG (CTT) AG 112975-113030 GT TGG (TCC) AG 113139-113230 AG CGA -recovered pasa_asmbl_8128.p1, initial, 111152, 111305 -recovered pasa_asmbl_8128.p1, internal, 111708, 111891 -recovered pasa_asmbl_8128.p1, internal, 112975, 113030 Valid prediction for GlimmerHMM_glimmerT_31107-T1 Valid prediction for GeneMark_model.53729_t Valid prediction for GeneMark_model.53712_t Valid prediction for GeneMark_model.53755_t Valid prediction for GlimmerHMM_glimmerT_31113-T1 Valid prediction for GlimmerHMM_glimmerT_31099-T1 Valid prediction for CodingQuarry_transcript_10438-T1 Valid prediction for snap_scaffold_12-snap.2710-T1 Valid prediction for CodingQuarry_transcript_10439-T1 Valid prediction for GlimmerHMM_glimmerT_31108-T1 Valid prediction for snap_scaffold_12-snap.2713-T1 Valid prediction for GlimmerHMM_glimmerT_31110-T1 Valid prediction for GeneMark_model.53733_t Valid prediction for GlimmerHMM_glimmerT_31104-T1 Valid prediction for GeneMark_model.53731_t Valid prediction for snap_scaffold_12-snap.2696-T1 Valid prediction for GeneMark_model.53730_t Valid prediction for snap_scaffold_12-snap.2686-T1 Valid prediction for GeneMark_model.53727_t Valid prediction for GeneMark_model.53719_t Valid prediction for GlimmerHMM_glimmerT_31111-T1 Valid prediction for GlimmerHMM_glimmerT_31103-T1 Couldn't classify 128940, 128995 Sorry, prediction pasa_asmbl_8290.p1 fails validation. (GCT) CT 128940-128995 GT AGG (GTA) AG 129103-129232 GT AAG (GAA) AG 129338-129514 GG GAG -recovered pasa_asmbl_8290.p1, terminal, 129338, 129514 -recovered pasa_asmbl_8290.p1, internal, 129103, 129232 Valid prediction for GeneMark_model.53737_t Couldn't classify 126460, 126666 Couldn't classify 127649, 127725 Sorry, prediction pasa_asmbl_8289.p1 fails validation. (ACA) CC 126460-126666 GT GGG (AGA) AG 126760-126820 GT AAG (TCA) AG 127293-127406 GT GGG (CTT) AG 127649-127725 GT ATG -recovered pasa_asmbl_8289.p1, internal, 126760, 126820 -recovered pasa_asmbl_8289.p1, internal, 127293, 127406 -recovered pasa_asmbl_8289.p1, internal, 127649, 127725 Valid prediction for Augustus_model.g20758.t1 Valid prediction for GeneMark_model.53721_t Valid prediction for snap_scaffold_12-snap.2683-T1 Valid prediction for GeneMark_model.53757_t Valid prediction for Augustus_model.g20749.t1 Valid prediction for snap_scaffold_12-snap.2695-T1 Valid prediction for snap_scaffold_12-snap.2673-T1 Valid prediction for GeneMark_model.53742_t Valid prediction for GlimmerHMM_glimmerT_31112-T1 Valid prediction for snap_scaffold_12-snap.2679-T1 Couldn't classify 12215, 12499 Sorry, prediction pasa_asmbl_8136.p1 fails validation. (TAC) CA 12215-12499 GT GAG (GGG) AG 12540-12579 GT ACG (TGT) AG 14425-14730 GT AGG (CCT) AG 14944-15833 TC AAT -recovered pasa_asmbl_8136.p1, terminal, 14944, 15833 -recovered pasa_asmbl_8136.p1, internal, 12540, 12579 -recovered pasa_asmbl_8136.p1, internal, 14425, 14730 Valid prediction for snap_scaffold_12-snap.2698-T1 Valid prediction for GlimmerHMM_glimmerT_31125-T1 Valid prediction for GeneMark_model.53713_t Valid prediction for snap_scaffold_12-snap.2689-T1 Valid prediction for GlimmerHMM_glimmerT_31118-T1 Valid prediction for snap_scaffold_12-snap.2687-T1 Valid prediction for GeneMark_model.53749_t Valid prediction for Augustus_model.g20765.t1 Valid prediction for GeneMark_model.53725_t Valid prediction for GlimmerHMM_glimmerT_31121-T1 Valid prediction for snap_scaffold_12-snap.2712-T1 Valid prediction for CodingQuarry_transcript_10431-T1 Valid prediction for GlimmerHMM_glimmerT_31116-T1 Valid prediction for Augustus_model.g20752.t1 Valid prediction for GeneMark_model.53745_t Valid prediction for snap_scaffold_12-snap.2705-T1 Valid prediction for GeneMark_model.53722_t Valid prediction for Augustus_model.g20756.t1 Valid prediction for Augustus_model.g20767.t1 Valid prediction for Augustus_model.g20753.t1 Valid prediction for GeneMark_model.53752_t Valid prediction for GeneMark_model.53739_t Valid prediction for GeneMark_model.53735_t Valid prediction for HiQ_model.g20764.t1 Valid prediction for GeneMark_model.53717_t Valid prediction for snap_scaffold_12-snap.2701-T1 Valid prediction for snap_scaffold_12-snap.2707-T1 Valid prediction for snap_scaffold_12-snap.2680-T1 Valid prediction for GlimmerHMM_glimmerT_31109-T1 -loading the search evidence (protein and EST search results, strand: -) -scoring exons (strand: -)Error with prediction: snap lend_intergenic: 9975, rend_intergenic: 4169 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 11575, rend_intergenic: 10919 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 28280, rend_intergenic: 24078 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 44822, rend_intergenic: 39961 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 47381, rend_intergenic: 45452 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 71424, rend_intergenic: 56899 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 85132, rend_intergenic: 74559 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 95339, rend_intergenic: 92698 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 107957, rend_intergenic: 100866 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 126436, rend_intergenic: 118358 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 136564, rend_intergenic: 129542 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -building DP trellis -building trellis in range 1 - 160349 -exon list size: 728 building trellis 0.1 0.3 0.4 0.5 0.7 0.8 1.0 1.1 1.2 1.4 1.5 1.6 1.8 1.9 2.1 2.2 2.3 2.5 2.6 2.7 2.9 3.0 3.2 3.3 3.4 3.6 3.7 3.8 4.0 4.1 4.2 4.4 4.5 4.7 4.8 4.9 5.1 5.2 5.3 5.5 5.6 5.8 5.9 6.0 6.2 6.3 6.4 6.6 6.7 6.8 7.0 7.1 7.3 7.4 7.5 7.7 7.8 7.9 8.1 8.2 8.4 8.5 8.6 8.8 8.9 9.0 9.2 9.3 9.5 9.6 9.7 9.9 10.0 10.1 10.3 10.4 10.5 10.7 10.8 11.0 11.1 11.2 11.4 11.5 11.6 11.8 11.9 12.1 12.2 12.3 12.5 12.6 12.7 12.9 13.0 13.2 13.3 13.4 13.6 13.7 13.8 14.0 14.1 14.2 14.4 14.5 14.7 14.8 14.9 15.1 15.2 15.3 15.5 15.6 15.8 15.9 16.0 16.2 16.3 16.4 16.6 16.7 16.8 17.0 17.1 17.3 17.4 17.5 17.7 17.8 17.9 18.1 18.2 18.4 18.5 18.6 18.8 18.9 19.0 19.2 19.3 19.5 19.6 19.7 19.9 20.0 20.1 20.3 20.4 20.5 20.7 20.8 21.0 21.1 21.2 21.4 21.5 21.6 21.8 21.9 22.1 22.2 22.3 22.5 22.6 22.7 22.9 23.0 23.2 23.3 23.4 23.6 23.7 23.8 24.0 24.1 24.2 24.4 24.5 24.7 24.8 24.9 25.1 25.2 25.3 25.5 25.6 25.8 25.9 26.0 26.2 26.3 26.4 26.6 26.7 26.8 27.0 27.1 27.3 27.4 27.5 27.7 27.8 27.9 28.1 28.2 28.4 28.5 28.6 28.8 28.9 29.0 29.2 29.3 29.5 29.6 29.7 29.9 30.0 30.1 30.3 30.4 30.5 30.7 30.8 31.0 31.1 31.2 31.4 31.5 31.6 31.8 31.9 32.1 32.2 32.3 32.5 32.6 32.7 32.9 33.0 33.2 33.3 33.4 33.6 33.7 33.8 34.0 34.1 34.2 34.4 34.5 34.7 34.8 34.9 35.1 35.2 35.3 35.5 35.6 35.8 35.9 36.0 36.2 36.3 36.4 36.6 36.7 36.8 37.0 37.1 37.3 37.4 37.5 37.7 37.8 37.9 38.1 38.2 38.4 38.5 38.6 38.8 38.9 39.0 39.2 39.3 39.5 39.6 39.7 39.9 40.0 40.1 40.3 40.4 40.5 40.7 40.8 41.0 41.1 41.2 41.4 41.5 41.6 41.8 41.9 42.1 42.2 42.3 42.5 42.6 42.7 42.9 43.0 43.2 43.3 43.4 43.6 43.7 43.8 44.0 44.1 44.2 44.4 44.5 44.7 44.8 44.9 45.1 45.2 45.3 45.5 45.6 45.8 45.9 46.0 46.2 46.3 46.4 46.6 46.7 46.8 47.0 47.1 47.3 47.4 47.5 47.7 47.8 47.9 48.1 48.2 48.4 48.5 48.6 48.8 48.9 49.0 49.2 49.3 49.5 49.6 49.7 49.9 50.0 50.1 50.3 50.4 50.5 50.7 50.8 51.0 51.1 51.2 51.4 51.5 51.6 51.8 51.9 52.1 52.2 52.3 52.5 52.6 52.7 52.9 53.0 53.2 53.3 53.4 53.6 53.7 53.8 54.0 54.1 54.2 54.4 54.5 54.7 54.8 54.9 55.1 55.2 55.3 55.5 55.6 55.8 55.9 56.0 56.2 56.3 56.4 56.6 56.7 56.8 57.0 57.1 57.3 57.4 57.5 57.7 57.8 57.9 58.1 58.2 58.4 58.5 58.6 58.8 58.9 59.0 59.2 59.3 59.5 59.6 59.7 59.9 60.0 60.1 60.3 60.4 60.5 60.7 60.8 61.0 61.1 61.2 61.4 61.5 61.6 61.8 61.9 62.1 62.2 62.3 62.5 62.6 62.7 62.9 63.0 63.2 63.3 63.4 63.6 63.7 63.8 64.0 64.1 64.2 64.4 64.5 64.7 64.8 64.9 65.1 65.2 65.3 65.5 65.6 65.8 65.9 66.0 66.2 66.3 66.4 66.6 66.7 66.8 67.0 67.1 67.3 67.4 67.5 67.7 67.8 67.9 68.1 68.2 68.4 68.5 68.6 68.8 68.9 69.0 69.2 69.3 69.5 69.6 69.7 69.9 70.0 70.1 70.3 70.4 70.5 70.7 70.8 71.0 71.1 71.2 71.4 71.5 71.6 71.8 71.9 72.1 72.2 72.3 72.5 72.6 72.7 72.9 73.0 73.2 73.3 73.4 73.6 73.7 73.8 74.0 74.1 74.2 74.4 74.5 74.7 74.8 74.9 75.1 75.2 75.3 75.5 75.6 75.8 75.9 76.0 76.2 76.3 76.4 76.6 76.7 76.8 77.0 77.1 77.3 77.4 77.5 77.7 77.8 77.9 78.1 78.2 78.4 78.5 78.6 78.8 78.9 79.0 79.2 79.3 79.5 79.6 79.7 79.9 80.0 80.1 80.3 80.4 80.5 80.7 80.8 81.0 81.1 81.2 81.4 81.5 81.6 81.8 81.9 82.1 82.2 82.3 82.5 82.6 82.7 82.9 83.0 83.2 83.3 83.4 83.6 83.7 83.8 84.0 84.1 84.2 84.4 84.5 84.7 84.8 84.9 85.1 85.2 85.3 85.5 85.6 85.8 85.9 86.0 86.2 86.3 86.4 86.6 86.7 86.8 87.0 87.1 87.3 87.4 87.5 87.7 87.8 87.9 88.1 88.2 88.4 88.5 88.6 88.8 88.9 89.0 89.2 89.3 89.5 89.6 89.7 89.9 90.0 90.1 90.3 90.4 90.5 90.7 90.8 91.0 91.1 91.2 91.4 91.5 91.6 91.8 91.9 92.1 92.2 92.3 92.5 92.6 92.7 92.9 93.0 93.2 93.3 93.4 93.6 93.7 93.8 94.0 94.1 94.2 94.4 94.5 94.7 94.8 94.9 95.1 95.2 95.3 95.5 95.6 95.8 95.9 96.0 96.2 96.3 96.4 96.6 96.7 96.8 97.0 97.1 97.3 97.4 97.5 97.7 97.8 97.9 98.1 98.2 98.4 98.5 98.6 98.8 98.9 99.0 99.2 99.3 99.5 99.6 99.7 99.9 -found 33 predictions from path traversal Error with prediction: snap lend_intergenic: 9975, rend_intergenic: 4169 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 11575, rend_intergenic: 10919 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 28280, rend_intergenic: 24078 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 44822, rend_intergenic: 39961 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 47381, rend_intergenic: 45452 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 71424, rend_intergenic: 56899 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 85132, rend_intergenic: 74559 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 95339, rend_intergenic: 92698 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 107957, rend_intergenic: 100866 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 126436, rend_intergenic: 118358 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 136564, rend_intergenic: 129542 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -reporting highest scoring path thru the trellis. -found 25 predictions persist after filtering for low support