-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_12/scaffold_12_13900965-14146948

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for GlimmerHMM_glimmerT_31088-T1
Valid prediction for GeneMark_model.53673_t
Valid prediction for GeneMark_model.53692_t
Valid prediction for snap_scaffold_12-snap.2651-T1
Valid prediction for GeneMark_model.53629_t
Valid prediction for GeneMark_model.53658_t
Valid prediction for GeneMark_model.53700_t
Valid prediction for GeneMark_model.53623_t
Valid prediction for GeneMark_model.53702_t
Valid prediction for snap_scaffold_12-snap.2665-T1
Valid prediction for HiQ_model.g20731.t1
Valid prediction for GeneMark_model.53644_t
Valid prediction for GlimmerHMM_glimmerT_31071-T1
Valid prediction for GeneMark_model.53690_t
Valid prediction for GeneMark_model.53625_t
Valid prediction for GeneMark_model.53642_t
Valid prediction for GeneMark_model.53664_t
Valid prediction for snap_scaffold_12-snap.2656-T1
Valid prediction for snap_scaffold_12-snap.2639-T1
Valid prediction for GlimmerHMM_glimmerT_31079-T1
Valid prediction for snap_scaffold_12-snap.2632-T1
Valid prediction for snap_scaffold_12-snap.2654-T1
Valid prediction for snap_scaffold_12-snap.2652-T1
Valid prediction for GlimmerHMM_glimmerT_31096-T1
Valid prediction for Augustus_model.g20736.t1
Valid prediction for GeneMark_model.53688_t
Valid prediction for GeneMark_model.53698_t
Valid prediction for GlimmerHMM_glimmerT_31083-T1
Valid prediction for snap_scaffold_12-snap.2636-T1
Valid prediction for GeneMark_model.53662_t
Valid prediction for GeneMark_model.53681_t
Valid prediction for GeneMark_model.53637_t
Valid prediction for Augustus_model.g20733.t1
Valid prediction for HiQ_model.g20730.t1
Valid prediction for GeneMark_model.53706_t
Valid prediction for GlimmerHMM_glimmerT_31068-T1
Valid prediction for GeneMark_model.53694_t
Valid prediction for GeneMark_model.53631_t
Valid prediction for GeneMark_model.53650_t
Valid prediction for Augustus_model.g20727.t1
Valid prediction for snap_scaffold_12-snap.2630-T1
Valid prediction for GeneMark_model.53633_t
Valid prediction for snap_scaffold_12-snap.2660-T1
Valid prediction for GlimmerHMM_glimmerT_31091-T1
Valid prediction for Augustus_model.g20734.t1
Valid prediction for GeneMark_model.53684_t
Couldn't classify 234549, 234593
Sorry, prediction pasa_asmbl_9023.p1 fails validation.
(AAT)	 AC	234549-234593	GT	AAG
(TTG)	 AG	234808-234947	GT	GGG
(GAT)	 AG	235118-235239	GT	TGG
(AGC)	 AG	235555-235698	GT	CGG
(TGA)	 AG	236106-236213	GT	AGG
(GGG)	 AG	236370-236556	GT	GCG
(TTT)	 AG	236672-236795	GT	ACG
(GTG)	 AG	236849-236962	AC	AGA
-recovered pasa_asmbl_9023.p1, terminal, 236849, 236962
-recovered pasa_asmbl_9023.p1, internal, 234808, 234947
-recovered pasa_asmbl_9023.p1, internal, 235118, 235239
-recovered pasa_asmbl_9023.p1, internal, 235555, 235698
-recovered pasa_asmbl_9023.p1, internal, 236106, 236213
-recovered pasa_asmbl_9023.p1, internal, 236370, 236556
-recovered pasa_asmbl_9023.p1, internal, 236672, 236795
Valid prediction for snap_scaffold_12-snap.2657-T1
Valid prediction for GeneMark_model.53639_t
Valid prediction for GlimmerHMM_glimmerT_31074-T1
Couldn't classify 165821, 165910
Sorry, prediction pasa_asmbl_9016.p1 fails validation.
(ATG)	 GA	163117-163623	GT	AGG
(GAA)	 AG	164374-164469	GT	AGG
(GAG)	 AG	165821-165910	NN	NNN
-recovered pasa_asmbl_9016.p1, initial, 163117, 163623
-recovered pasa_asmbl_9016.p1, internal, 164374, 164469
Valid prediction for GlimmerHMM_glimmerT_31082-T1
Valid prediction for Augustus_model.g20723.t1
Valid prediction for GeneMark_model.53666_t
Couldn't classify 158088, 158196
Sorry, prediction pasa_asmbl_9015.p1 fails validation.
(CAG)	 CG	158088-158196	GT	AGG
(CAG)	 AG	158390-159450	CC	AGC
-recovered pasa_asmbl_9015.p1, terminal, 158390, 159450
Valid prediction for snap_scaffold_12-snap.2642-T1
Sorry, intron length (3) is less than minimum required (10)
Sorry, intron length (9) is less than minimum required (10)
Couldn't classify 166938, 167007
Sorry, prediction pasa_asmbl_9017.p1 fails validation.
(CAA)	 TA	166938-167007	GT	AGG
(GTG)	 AG	167183-167733	GC	GAG
-recovered pasa_asmbl_9017.p1, terminal, 167183, 167733
-recovered pasa_asmbl_9017.p1, internal, 167183, 167733
Valid prediction for snap_scaffold_12-snap.2640-T1
Valid prediction for GeneMark_model.53708_t
Valid prediction for GlimmerHMM_glimmerT_31070-T1
Valid prediction for Augustus_model.g20724.t1
Valid prediction for snap_scaffold_12-snap.2670-T1
Valid prediction for GeneMark_model.53679_t
Valid prediction for GeneMark_model.53682_t
Valid prediction for GeneMark_model.53660_t
Valid prediction for GeneMark_model.53647_t
Valid prediction for Augustus_model.g20735.t1
Valid prediction for GeneMark_model.53677_t
Valid prediction for pasa_asmbl_9014.p1
Valid prediction for GlimmerHMM_glimmerT_31089-T1
Valid prediction for snap_scaffold_12-snap.2645-T1
Valid prediction for GlimmerHMM_glimmerT_31087-T1
Valid prediction for GeneMark_model.53675_t
Valid prediction for GeneMark_model.53669_t
Valid prediction for Augustus_model.g20719.t1
Valid prediction for Augustus_model.g20720.t1
Valid prediction for GeneMark_model.53656_t
Valid prediction for GeneMark_model.53653_t
Valid prediction for GeneMark_model.53627_t
Valid prediction for GlimmerHMM_glimmerT_31065-T1
Valid prediction for snap_scaffold_12-snap.2663-T1
Valid prediction for GeneMark_model.53667_t
Valid prediction for GeneMark_model.53654_t
Valid prediction for GeneMark_model.53671_t
Valid prediction for GlimmerHMM_glimmerT_31067-T1
Valid prediction for snap_scaffold_12-snap.2638-T1
Valid prediction for Augustus_model.g20722.t1
Valid prediction for Augustus_model.g20725.t1
Couldn't classify 181821, 181854
Sorry, prediction pasa_asmbl_9018.p1 fails validation.
(CAG)	 TC	181821-181854	GT	AGG
(AGC)	 AG	181968-182102	GT	CTG
(GTG)	 AG	182267-182376	GT	AGG
(TTT)	 AG	182597-182744	GT	AGG
(AAT)	 AG	182933-182958	CG	GAC
-recovered pasa_asmbl_9018.p1, terminal, 182933, 182958
-recovered pasa_asmbl_9018.p1, internal, 181968, 182102
-recovered pasa_asmbl_9018.p1, internal, 182267, 182376
-recovered pasa_asmbl_9018.p1, internal, 182597, 182744
Valid prediction for GeneMark_model.53686_t
Valid prediction for GlimmerHMM_glimmerT_31076-T1
Valid prediction for snap_scaffold_12-snap.2637-T1
Valid prediction for snap_scaffold_12-snap.2668-T1
Valid prediction for GeneMark_model.53652_t
Valid prediction for GlimmerHMM_glimmerT_31086-T1
Valid prediction for snap_scaffold_12-snap.2647-T1
Valid prediction for GlimmerHMM_glimmerT_31072-T1
Valid prediction for Augustus_model.g20738.t1
Valid prediction for snap_scaffold_12-snap.2641-T1
Valid prediction for Augustus_model.g20743.t1
Couldn't classify 234184, 234254
Sorry, prediction pasa_asmbl_9019.p1 fails validation.
(ATG)	 GC	231143-231326	GT	AGG
(ACT)	 AG	231486-231615	GT	ATG
(ATC)	 AG	233788-233834	GT	AGG
(AGC)	 AG	234184-234254	AT	ACA
-recovered pasa_asmbl_9019.p1, initial, 231143, 231326
-recovered pasa_asmbl_9019.p1, internal, 231486, 231615
-recovered pasa_asmbl_9019.p1, internal, 233788, 233834

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for GlimmerHMM_glimmerT_31069-T1
Valid prediction for GeneMark_model.53651_t
Valid prediction for snap_scaffold_12-snap.2658-T1
Valid prediction for snap_scaffold_12-snap.2649-T1
Valid prediction for Augustus_model.g20721.t1
Valid prediction for GeneMark_model.53657_t
Valid prediction for Augustus_model.g20737.t1
Valid prediction for GlimmerHMM_glimmerT_31092-T1
Couldn't classify 50178, 50777
Sorry, prediction pasa_asmbl_8299.p1 fails validation.
(CCC)	 TT	50178-50777	CT	CTC
Valid prediction for Augustus_model.g20740.t1
Valid prediction for GeneMark_model.53626_t
Valid prediction for GeneMark_model.53678_t
Valid prediction for CodingQuarry_transcript_10425-T1
Valid prediction for GeneMark_model.53630_t
Valid prediction for GeneMark_model.53636_t
Valid prediction for snap_scaffold_12-snap.2659-T1
Valid prediction for GeneMark_model.53704_t
Valid prediction for GeneMark_model.53693_t
Valid prediction for GeneMark_model.53710_t
Valid prediction for snap_scaffold_12-snap.2669-T1
Valid prediction for HiQ_model.g20742.t1
Valid prediction for snap_scaffold_12-snap.2631-T1
Valid prediction for GeneMark_model.53643_t
Valid prediction for GeneMark_model.53655_t
Valid prediction for GlimmerHMM_glimmerT_31078-T1
Valid prediction for GeneMark_model.53645_t
Valid prediction for GeneMark_model.53624_t
Valid prediction for GlimmerHMM_glimmerT_31085-T1
Valid prediction for GeneMark_model.53665_t
Valid prediction for CodingQuarry_transcript_10424-T1
Valid prediction for CodingQuarry_transcript_10426-T1
Valid prediction for snap_scaffold_12-snap.2646-T1
Valid prediction for GeneMark_model.53689_t
Valid prediction for GlimmerHMM_glimmerT_31084-T1
Valid prediction for snap_scaffold_12-snap.2653-T1
Valid prediction for GlimmerHMM_glimmerT_31064-T1
Couldn't classify 50838, 52394
Sorry, prediction pasa_asmbl_8102.p1 fails validation.
(CCC)	 AA	50838-52394	TA	GAT
Valid prediction for snap_scaffold_12-snap.2629-T1
Valid prediction for GeneMark_model.53697_t
Valid prediction for GeneMark_model.53683_t
Couldn't classify 91403, 91612
Sorry, prediction pasa_asmbl_8100.p1 fails validation.
(CGA)	 CC	91403-91612	GT	AGG
(TAT)	 AG	91830-92002	GT	AGG
(GAT)	 AG	92189-92255	GC	GAG
-recovered pasa_asmbl_8100.p1, terminal, 92189, 92255
-recovered pasa_asmbl_8100.p1, internal, 91830, 92002
-recovered pasa_asmbl_8100.p1, internal, 92189, 92255
Valid prediction for snap_scaffold_12-snap.2644-T1
Couldn't classify 26260, 26619
Sorry, prediction pasa_asmbl_8115.p1 fails validation.
(GCC)	 CA	26260-26619	AA	GGA
Valid prediction for GeneMark_model.53661_t
Valid prediction for GeneMark_model.53676_t
Valid prediction for GeneMark_model.53709_t
Valid prediction for GlimmerHMM_glimmerT_31077-T1
Valid prediction for GeneMark_model.53628_t
Valid prediction for GeneMark_model.53635_t
Valid prediction for snap_scaffold_12-snap.2671-T1
Valid prediction for GeneMark_model.53646_t
Valid prediction for GeneMark_model.53701_t
Valid prediction for snap_scaffold_12-snap.2625-T1
Valid prediction for GlimmerHMM_glimmerT_31066-T1
Valid prediction for snap_scaffold_12-snap.2627-T1
Valid prediction for GlimmerHMM_glimmerT_31075-T1
Valid prediction for HiQ_model.g20729.t1
Valid prediction for GeneMark_model.53685_t
Valid prediction for GeneMark_model.53640_t
Valid prediction for snap_scaffold_12-snap.2626-T1
Valid prediction for snap_scaffold_12-snap.2628-T1
Valid prediction for GeneMark_model.53632_t
Valid prediction for GlimmerHMM_glimmerT_31080-T1
Valid prediction for GlimmerHMM_glimmerT_31095-T1
Valid prediction for GeneMark_model.53670_t
Valid prediction for Augustus_model.g20728.t1
Valid prediction for GeneMark_model.53695_t
Valid prediction for HiQ_model.g20726.t1
Valid prediction for snap_scaffold_12-snap.2667-T1
Valid prediction for GlimmerHMM_glimmerT_31094-T1
Valid prediction for snap_scaffold_12-snap.2655-T1
Valid prediction for snap_scaffold_12-snap.2664-T1
Valid prediction for GeneMark_model.53663_t
Valid prediction for snap_scaffold_12-snap.2661-T1
Sorry, intron length (4) is less than minimum required (10)
Valid prediction for GeneMark_model.53659_t
Valid prediction for GeneMark_model.53680_t
Valid prediction for Augustus_model.g20741.t1
Valid prediction for GeneMark_model.53641_t
Valid prediction for GeneMark_model.53648_t
Valid prediction for GeneMark_model.53649_t
Valid prediction for GeneMark_model.53687_t
Valid prediction for GeneMark_model.53696_t
Valid prediction for pasa_asmbl_8086.p1
Valid prediction for snap_scaffold_12-snap.2648-T1
Valid prediction for snap_scaffold_12-snap.2633-T1
Valid prediction for Augustus_model.g20732.t1
Valid prediction for GlimmerHMM_glimmerT_31063-T1
Valid prediction for snap_scaffold_12-snap.2643-T1
Valid prediction for GeneMark_model.53705_t
Valid prediction for pasa_asmbl_8107.p1
Valid prediction for GeneMark_model.53634_t
Valid prediction for GlimmerHMM_glimmerT_31093-T1
Valid prediction for snap_scaffold_12-snap.2650-T1
Valid prediction for snap_scaffold_12-snap.2635-T1
Valid prediction for GlimmerHMM_glimmerT_31081-T1
Valid prediction for pasa_asmbl_8120.p1
Valid prediction for GlimmerHMM_glimmerT_31097-T1
Couldn't classify 48295, 48869
Sorry, prediction pasa_asmbl_8103.p2 fails validation.
(ATG)	 GG	48057-48159	GT	GGG
(GCG)	 AG	48295-48869	AT	AGA
-recovered pasa_asmbl_8103.p2, initial, 48057, 48159
Valid prediction for GlimmerHMM_glimmerT_31073-T1
Valid prediction for GeneMark_model.53668_t
Valid prediction for GeneMark_model.53638_t
Valid prediction for snap_scaffold_12-snap.2634-T1
Valid prediction for GeneMark_model.53707_t
Valid prediction for GeneMark_model.53699_t
Valid prediction for snap_scaffold_12-snap.2662-T1
Valid prediction for GeneMark_model.53691_t
Valid prediction for Augustus_model.g20739.t1
Valid prediction for GlimmerHMM_glimmerT_31090-T1
Valid prediction for snap_scaffold_12-snap.2666-T1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 39834, rend_intergenic: 39273  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 41628, rend_intergenic: 40681  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 45143, rend_intergenic: 41677  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 64147, rend_intergenic: 46144  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 112443, rend_intergenic: 64212  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 124548, rend_intergenic: 113461  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 136111, rend_intergenic: 131680  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 167733, rend_intergenic: 164165  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 176716, rend_intergenic: 169288  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 182958, rend_intergenic: 178656  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 192583, rend_intergenic: 190736  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 207629, rend_intergenic: 199438  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 216834, rend_intergenic: 208601  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 224375, rend_intergenic: 222879  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 234805, rend_intergenic: 231143  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 236962, rend_intergenic: 234847  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 245984
-exon list size: 1054


building trellis

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33.9    
34.0    
34.1    
34.2    
34.3    
34.4    
34.5    
34.6    
34.7    
34.8    
34.8    
34.9    
35.0    
35.1    
35.2    
35.3    
35.4    
35.5    
35.6    
35.7    
35.8    
35.9    
36.0    
36.1    
36.2    
36.3    
36.4    
36.5    
36.6    
36.6    
36.7    
36.8    
36.9    
37.0    
37.1    
37.2    
37.3    
37.4    
37.5    
37.6    
37.7    
37.8    
37.9    
38.0    
38.1    
38.2    
38.3    
38.4    
38.4    
38.5    
38.6    
38.7    
38.8    
38.9    
39.0    
39.1    
39.2    
39.3    
39.4    
39.5    
39.6    
39.7    
39.8    
39.9    
40.0    
40.1    
40.2    
40.2    
40.3    
40.4    
40.5    
40.6    
40.7    
40.8    
40.9    
41.0    
41.1    
41.2    
41.3    
41.4    
41.5    
41.6    
41.7    
41.8    
41.9    
42.0    
42.0    
42.1    
42.2    
42.3    
42.4    
42.5    
42.6    
42.7    
42.8    
42.9    
43.0    
43.1    
43.2    
43.3    
43.4    
43.5    
43.6    
43.7    
43.8    
43.8    
43.9    
44.0    
44.1    
44.2    
44.3    
44.4    
44.5    
44.6    
44.7    
44.8    
44.9    
45.0    
45.1    
45.2    
45.3    
45.4    
45.5    
45.5    
45.6    
45.7    
45.8    
45.9    
46.0    
46.1    
46.2    
46.3    
46.4    
46.5    
46.6    
46.7    
46.8    
46.9    
47.0    
47.1    
47.2    
47.3    
47.3    
47.4    
47.5    
47.6    
47.7    
47.8    
47.9    
48.0    
48.1    
48.2    
48.3    
48.4    
48.5    
48.6    
48.7    
48.8    
48.9    
49.0    
49.1    
49.1    
49.2    
49.3    
49.4    
49.5    
49.6    
49.7    
49.8    
49.9    
50.0    
50.1    
50.2    
50.3    
50.4    
50.5    
50.6    
50.7    
50.8    
50.9    
50.9    
51.0    
51.1    
51.2    
51.3    
51.4    
51.5    
51.6    
51.7    
51.8    
51.9    
52.0    
52.1    
52.2    
52.3    
52.4    
52.5    
52.6    
52.7    
52.7    
52.8    
52.9    
53.0    
53.1    
53.2    
53.3    
53.4    
53.5    
53.6    
53.7    
53.8    
53.9    
54.0    
54.1    
54.2    
54.3    
54.4    
54.5    
54.5    
54.6    
54.7    
54.8    
54.9    
55.0    
55.1    
55.2    
55.3    
55.4    
55.5    
55.6    
55.7    
55.8    
55.9    
56.0    
56.1    
56.2    
56.2    
56.3    
56.4    
56.5    
56.6    
56.7    
56.8    
56.9    
57.0    
57.1    
57.2    
57.3    
57.4    
57.5    
57.6    
57.7    
57.8    
57.9    
58.0    
58.0    
58.1    
58.2    
58.3    
58.4    
58.5    
58.6    
58.7    
58.8    
58.9    
59.0    
59.1    
59.2    
59.3    
59.4    
59.5    
59.6    
59.7    
59.8    
59.8    
59.9    
60.0    
60.1    
60.2    
60.3    
60.4    
60.5    
60.6    
60.7    
60.8    
60.9    
61.0    
61.1    
61.2    
61.3    
61.4    
61.5    
61.6    
61.6    
61.7    
61.8    
61.9    
62.0    
62.1    
62.2    
62.3    
62.4    
62.5    
62.6    
62.7    
62.8    
62.9    
63.0    
63.1    
63.2    
63.3    
63.4    
63.4    
63.5    
63.6    
63.7    
63.8    
63.9    
64.0    
64.1    
64.2    
64.3    
64.4    
64.5    
64.6    
64.7    
64.8    
64.9    
65.0    
65.1    
65.2    
65.2    
65.3    
65.4    
65.5    
65.6    
65.7    
65.8    
65.9    
66.0    
66.1    
66.2    
66.3    
66.4    
66.5    
66.6    
66.7    
66.8    
66.9    
67.0    
67.0    
67.1    
67.2    
67.3    
67.4    
67.5    
67.6    
67.7    
67.8    
67.9    
68.0    
68.1    
68.2    
68.3    
68.4    
68.5    
68.6    
68.7    
68.8    
68.8    
68.9    
69.0    
69.1    
69.2    
69.3    
69.4    
69.5    
69.6    
69.7    
69.8    
69.9    
70.0    
70.1    
70.2    
70.3    
70.4    
70.5    
70.5    
70.6    
70.7    
70.8    
70.9    
71.0    
71.1    
71.2    
71.3    
71.4    
71.5    
71.6    
71.7    
71.8    
71.9    
72.0    
72.1    
72.2    
72.3    
72.3    
72.4    
72.5    
72.6    
72.7    
72.8    
72.9    
73.0    
73.1    
73.2    
73.3    
73.4    
73.5    
73.6    
73.7    
73.8    
73.9    
74.0    
74.1    
74.1    
74.2    
74.3    
74.4    
74.5    
74.6    
74.7    
74.8    
74.9    
75.0    
75.1    
75.2    
75.3    
75.4    
75.5    
75.6    
75.7    
75.8    
75.9    
75.9    
76.0    
76.1    
76.2    
76.3    
76.4    
76.5    
76.6    
76.7    
76.8    
76.9    
77.0    
77.1    
77.2    
77.3    
77.4    
77.5    
77.6    
77.7    
77.7    
77.8    
77.9    
78.0    
78.1    
78.2    
78.3    
78.4    
78.5    
78.6    
78.7    
78.8    
78.9    
79.0    
79.1    
79.2    
79.3    
79.4    
79.5    
79.5    
79.6    
79.7    
79.8    
79.9    
80.0    
80.1    
80.2    
80.3    
80.4    
80.5    
80.6    
80.7    
80.8    
80.9    
81.0    
81.1    
81.2    
81.2    
81.3    
81.4    
81.5    
81.6    
81.7    
81.8    
81.9    
82.0    
82.1    
82.2    
82.3    
82.4    
82.5    
82.6    
82.7    
82.8    
82.9    
83.0    
83.0    
83.1    
83.2    
83.3    
83.4    
83.5    
83.6    
83.7    
83.8    
83.9    
84.0    
84.1    
84.2    
84.3    
84.4    
84.5    
84.6    
84.7    
84.8    
84.8    
84.9    
85.0    
85.1    
85.2    
85.3    
85.4    
85.5    
85.6    
85.7    
85.8    
85.9    
86.0    
86.1    
86.2    
86.3    
86.4    
86.5    
86.6    
86.6    
86.7    
86.8    
86.9    
87.0    
87.1    
87.2    
87.3    
87.4    
87.5    
87.6    
87.7    
87.8    
87.9    
88.0    
88.1    
88.2    
88.3    
88.4    
88.4    
88.5    
88.6    
88.7    
88.8    
88.9    
89.0    
89.1    
89.2    
89.3    
89.4    
89.5    
89.6    
89.7    
89.8    
89.9    
90.0    
90.1    
90.2    
90.2    
90.3    
90.4    
90.5    
90.6    
90.7    
90.8    
90.9    
91.0    
91.1    
91.2    
91.3    
91.4    
91.5    
91.6    
91.7    
91.8    
91.9    
92.0    
92.0    
92.1    
92.2    
92.3    
92.4    
92.5    
92.6    
92.7    
92.8    
92.9    
93.0    
93.1    
93.2    
93.3    
93.4    
93.5    
93.6    
93.7    
93.8    
93.8    
93.9    
94.0    
94.1    
94.2    
94.3    
94.4    
94.5    
94.6    
94.7    
94.8    
94.9    
95.0    
95.1    
95.2    
95.3    
95.4    
95.5    
95.5    
95.6    
95.7    
95.8    
95.9    
96.0    
96.1    
96.2    
96.3    
96.4    
96.5    
96.6    
96.7    
96.8    
96.9    
97.0    
97.1    
97.2    
97.3    
97.3    
97.4    
97.5    
97.6    
97.7    
97.8    
97.9    
98.0    
98.1    
98.2    
98.3    
98.4    
98.5    
98.6    
98.7    
98.8    
98.9    
99.0    
99.1    
99.1    
99.2    
99.3    
99.4    
99.5    
99.6    
99.7    
99.8    
99.9    
-found 57 predictions from path traversal
Error with prediction: snap lend_intergenic: 39834, rend_intergenic: 39273  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 41628, rend_intergenic: 40681  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 45143, rend_intergenic: 41677  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 64147, rend_intergenic: 46144  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 112443, rend_intergenic: 64212  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 124548, rend_intergenic: 113461  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 136111, rend_intergenic: 131680  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 167733, rend_intergenic: 164165  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 176716, rend_intergenic: 169288  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 182958, rend_intergenic: 178656  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 192583, rend_intergenic: 190736  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 207629, rend_intergenic: 199438  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 216834, rend_intergenic: 208601  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 224375, rend_intergenic: 222879  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 234805, rend_intergenic: 231143  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 236962, rend_intergenic: 234847  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 26 predictions persist after filtering for low support