-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_12/scaffold_12_12236273-12441161

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for GeneMark_model.53194_t
Valid prediction for snap_scaffold_12-snap.2294-T1
Valid prediction for GeneMark_model.53197_t
Valid prediction for GeneMark_model.53184_t
Valid prediction for snap_scaffold_12-snap.2281-T1
Valid prediction for snap_scaffold_12-snap.2268-T1
Valid prediction for GeneMark_model.53165_t
Valid prediction for snap_scaffold_12-snap.2265-T1
Valid prediction for GeneMark_model.53175_t
Valid prediction for CodingQuarry_transcript_10393-T1
Valid prediction for HiQ_model.g20565.t1
Valid prediction for HiQ_model.g20569.t1
Valid prediction for GeneMark_model.53181_t
Valid prediction for GeneMark_model.53179_t
Valid prediction for CodingQuarry_transcript_10385-T1
Valid prediction for GlimmerHMM_glimmerT_30829-T1
Valid prediction for GeneMark_model.53171_t
Valid prediction for Augustus_model.g20553.t1
Valid prediction for CodingQuarry_transcript_10396-T1
Valid prediction for snap_scaffold_12-snap.2296-T1
Valid prediction for GlimmerHMM_glimmerT_30821-T1
Valid prediction for GeneMark_model.53195_t
Valid prediction for GlimmerHMM_glimmerT_30844-T1
Valid prediction for snap_scaffold_12-snap.2283-T1
Valid prediction for GeneMark_model.53177_t
Valid prediction for GlimmerHMM_glimmerT_30831-T1
Valid prediction for GeneMark_model.53183_t
Valid prediction for snap_scaffold_12-snap.2278-T1
Valid prediction for Augustus_model.g20562.t1
Valid prediction for snap_scaffold_12-snap.2311-T1
Valid prediction for GeneMark_model.53202_t
Valid prediction for Augustus_model.g20564.t1
Valid prediction for snap_scaffold_12-snap.2286-T1
Valid prediction for GeneMark_model.53189_t
Valid prediction for GlimmerHMM_glimmerT_30825-T1
Valid prediction for GlimmerHMM_glimmerT_30845-T1
Valid prediction for GlimmerHMM_glimmerT_30830-T1
Valid prediction for GeneMark_model.53163_t
Valid prediction for GeneMark_model.53172_t
Valid prediction for snap_scaffold_12-snap.2309-T1
Valid prediction for GeneMark_model.53201_t
Valid prediction for snap_scaffold_12-snap.2273-T1
Valid prediction for snap_scaffold_12-snap.2290-T1
Valid prediction for snap_scaffold_12-snap.2284-T1
Valid prediction for snap_scaffold_12-snap.2279-T1
Valid prediction for snap_scaffold_12-snap.2270-T1
Valid prediction for pasa_asmbl_8957.p1
Valid prediction for CodingQuarry_transcript_10392-T1
Valid prediction for GlimmerHMM_glimmerT_30840-T1
Valid prediction for snap_scaffold_12-snap.2289-T1
Valid prediction for snap_scaffold_12-snap.2276-T1
Valid prediction for snap_scaffold_12-snap.2310-T1
Valid prediction for Augustus_model.g20573.t1
Valid prediction for GlimmerHMM_glimmerT_30836-T1
Valid prediction for Augustus_model.g20552.t1
Valid prediction for GeneMark_model.53169_t
Valid prediction for snap_scaffold_12-snap.2277-T1
Valid prediction for GeneMark_model.53174_t
Valid prediction for Augustus_model.g20572.t1
Valid prediction for Augustus_model.g20555.t1
Valid prediction for CodingQuarry_transcript_10386-T1
Valid prediction for GeneMark_model.53190_t
Valid prediction for GeneMark_model.53166_t
Valid prediction for GlimmerHMM_glimmerT_30815-T1
Valid prediction for snap_scaffold_12-snap.2299-T1
Valid prediction for HiQ_model.g20577.t1
Valid prediction for snap_scaffold_12-snap.2293-T1
Valid prediction for pasa_asmbl_8959.p1
Valid prediction for snap_scaffold_12-snap.2303-T1
Valid prediction for GlimmerHMM_glimmerT_30818-T1
Valid prediction for GeneMark_model.53198_t
Valid prediction for GeneMark_model.53187_t
Valid prediction for pasa_asmbl_8950.p1
Valid prediction for CodingQuarry_transcript_10384-T1
Valid prediction for GlimmerHMM_glimmerT_30812-T1
Valid prediction for snap_scaffold_12-snap.2272-T1
Valid prediction for snap_scaffold_12-snap.2264-T1
Valid prediction for CodingQuarry_transcript_10390-T1
Valid prediction for snap_scaffold_12-snap.2263-T1
Valid prediction for CodingQuarry_transcript_10391-T1
Valid prediction for GeneMark_model.53168_t
Valid prediction for snap_scaffold_12-snap.2301-T1
Valid prediction for HiQ_model.g20558.t1
Valid prediction for snap_scaffold_12-snap.2300-T1
Valid prediction for snap_scaffold_12-snap.2295-T1
Valid prediction for snap_scaffold_12-snap.2288-T1
Valid prediction for snap_scaffold_12-snap.2304-T1
Valid prediction for Augustus_model.g20557.t1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Couldn't classify 21522, 21561
Sorry, prediction pasa_asmbl_8015.p1 fails validation.
(TCC)	 CG	21522-21561	GT	CAG
(CTG)	 AG	21681-21847	GT	TGG
(GTG)	 AG	22254-22362	GT	GGG
(GTT)	 AG	22531-22661	TG	AAT
-recovered pasa_asmbl_8015.p1, terminal, 22531, 22661
-recovered pasa_asmbl_8015.p1, internal, 21681, 21847
-recovered pasa_asmbl_8015.p1, internal, 22254, 22362
Valid prediction for snap_scaffold_12-snap.2282-T1
Valid prediction for GlimmerHMM_glimmerT_30814-T1
Valid prediction for Augustus_model.g20570.t1
Valid prediction for CodingQuarry_transcript_10380-T1
Valid prediction for Augustus_model.g20575.t1
Valid prediction for GeneMark_model.53185_t
Valid prediction for snap_scaffold_12-snap.2274-T1
Valid prediction for GlimmerHMM_glimmerT_30828-T1
Valid prediction for GeneMark_model.53193_t
Valid prediction for GeneMark_model.53186_t
Valid prediction for Augustus_model.g20554.t1
Valid prediction for GeneMark_model.53176_t
Valid prediction for snap_scaffold_12-snap.2285-T1
Valid prediction for CodingQuarry_transcript_10383-T1
Valid prediction for Augustus_model.g20571.t1
Valid prediction for snap_scaffold_12-snap.2269-T1
Valid prediction for GeneMark_model.53199_t
Couldn't classify 43548, 43700
Couldn't classify 44059, 44151
Sorry, prediction pasa_asmbl_8012.p1 fails validation.
(CGC)	 AC	43548-43700	GT	AGG
(GTG)	 AG	43861-43953	GT	AGG
(GTG)	 AG	44059-44151	CA	CCC
-recovered pasa_asmbl_8012.p1, internal, 43861, 43953
Valid prediction for snap_scaffold_12-snap.2287-T1
Sorry, intron length (4) is less than minimum required (10)
Valid prediction for GlimmerHMM_glimmerT_30816-T1
Valid prediction for GeneMark_model.53167_t
Valid prediction for snap_scaffold_12-snap.2291-T1
Valid prediction for CodingQuarry_transcript_10387-T1
Valid prediction for GlimmerHMM_glimmerT_30842-T1
Valid prediction for GlimmerHMM_glimmerT_30835-T1
Valid prediction for GlimmerHMM_glimmerT_30824-T1
Valid prediction for CodingQuarry_transcript_10389-T1
Valid prediction for HiQ_model.g20559.t1
Valid prediction for Augustus_model.g20567.t1
Valid prediction for GeneMark_model.53180_t
Couldn't classify 117420, 117471
Couldn't classify 118630, 118794
Sorry, prediction pasa_asmbl_8004.p1 fails validation.
(CCT)	 AG	117420-117471	GT	AGG
(CCG)	 AG	117753-118015	GT	AGG
(GTG)	 AG	118198-118521	GT	AGG
(GAT)	 AG	118630-118794	CC	CCC
-recovered pasa_asmbl_8004.p1, internal, 117420, 117471
-recovered pasa_asmbl_8004.p1, internal, 117753, 118015
-recovered pasa_asmbl_8004.p1, internal, 118198, 118521
Valid prediction for GlimmerHMM_glimmerT_30827-T1
Valid prediction for GlimmerHMM_glimmerT_30837-T1
Valid prediction for Augustus_model.g20556.t1
Valid prediction for GlimmerHMM_glimmerT_30823-T1
Valid prediction for GeneMark_model.53192_t
Valid prediction for snap_scaffold_12-snap.2302-T1
Valid prediction for GlimmerHMM_glimmerT_30820-T1
Valid prediction for snap_scaffold_12-snap.2306-T1
Valid prediction for Augustus_model.g20566.t1
Valid prediction for CodingQuarry_transcript_10388-T1
Valid prediction for GlimmerHMM_glimmerT_30833-T1
Valid prediction for snap_scaffold_12-snap.2297-T1
Valid prediction for snap_scaffold_12-snap.2267-T1
Valid prediction for GlimmerHMM_glimmerT_30822-T1
Valid prediction for snap_scaffold_12-snap.2305-T1
Valid prediction for snap_scaffold_12-snap.2298-T1
Valid prediction for GlimmerHMM_glimmerT_30826-T1
Valid prediction for pasa_asmbl_7989.p1
Valid prediction for CodingQuarry_transcript_10382-T1
Valid prediction for snap_scaffold_12-snap.2271-T1
Valid prediction for CodingQuarry_transcript_10381-T1
Valid prediction for Augustus_model.g20561.t1
Valid prediction for GlimmerHMM_glimmerT_30834-T1
Valid prediction for Augustus_model.g20560.t1
Valid prediction for GeneMark_model.53196_t
Valid prediction for GlimmerHMM_glimmerT_30843-T1
Valid prediction for GlimmerHMM_glimmerT_30813-T1
Valid prediction for GlimmerHMM_glimmerT_30819-T1
Couldn't classify 119509, 119569
Couldn't classify 123888, 124917
Sorry, prediction pasa_asmbl_8003.p1 fails validation.
(GAG)	 AT	119509-119569	GT	GGG
(GCT)	 AG	119697-119842	GT	AGG
(GTG)	 AG	120063-120205	GT	AGG
(GAC)	 AG	120371-120584	GT	AGG
(ACT)	 AG	120891-121066	GT	AGG
(GGG)	 AG	121191-121353	GT	AGG
(GGT)	 AG	121671-121766	GT	AGG
(GAG)	 AG	121889-122005	GT	AGG
(TCC)	 AG	122165-122333	GT	AGG
(AAG)	 AG	122467-122663	GT	AGG
(GTG)	 AG	122879-123237	GT	AAG
(GGT)	 AG	123349-123501	GT	AGG
(GTC)	 AG	123633-123782	GT	AGG
(AGG)	 AG	123888-124917	CC	CCC
-recovered pasa_asmbl_8003.p1, internal, 119697, 119842
-recovered pasa_asmbl_8003.p1, internal, 120063, 120205
-recovered pasa_asmbl_8003.p1, internal, 120371, 120584
-recovered pasa_asmbl_8003.p1, internal, 120891, 121066
-recovered pasa_asmbl_8003.p1, internal, 121191, 121353
-recovered pasa_asmbl_8003.p1, internal, 121671, 121766
-recovered pasa_asmbl_8003.p1, internal, 121889, 122005
-recovered pasa_asmbl_8003.p1, internal, 122165, 122333
-recovered pasa_asmbl_8003.p1, internal, 122467, 122663
-recovered pasa_asmbl_8003.p1, internal, 122879, 123237
-recovered pasa_asmbl_8003.p1, internal, 123349, 123501
-recovered pasa_asmbl_8003.p1, internal, 123633, 123782
Valid prediction for GlimmerHMM_glimmerT_30817-T1
Valid prediction for GeneMark_model.53200_t
Couldn't classify 113759, 113856
Couldn't classify 116349, 116452
Sorry, prediction pasa_asmbl_8352.p1 fails validation.
(AGG)	 GG	113759-113856	GT	AAG
(TCT)	 AG	114367-114529	GT	AGG
(GTG)	 AG	114656-114803	GT	GGG
(GAA)	 AG	114914-115147	GT	AGG
(GTC)	 AG	115249-115343	GT	TGG
(GAC)	 AG	115616-115771	GT	AGG
(GTG)	 AG	115872-115953	GT	GGG
(GAG)	 AG	116045-116236	GT	AGG
(GGG)	 AG	116349-116452	AA	CCA
-recovered pasa_asmbl_8352.p1, internal, 114367, 114529
-recovered pasa_asmbl_8352.p1, internal, 114656, 114803
-recovered pasa_asmbl_8352.p1, internal, 114914, 115147
-recovered pasa_asmbl_8352.p1, internal, 115249, 115343
-recovered pasa_asmbl_8352.p1, internal, 115616, 115771
-recovered pasa_asmbl_8352.p1, internal, 115872, 115953
-recovered pasa_asmbl_8352.p1, internal, 116045, 116236
Valid prediction for GeneMark_model.53178_t
Valid prediction for GeneMark_model.53164_t
Couldn't classify 57848, 64852
Sorry, prediction pasa_asmbl_8009.p1 fails validation.
(ATG)	 CG	57848-64852	AA	ACA
Valid prediction for GeneMark_model.53188_t
Valid prediction for GeneMark_model.53170_t
Valid prediction for GlimmerHMM_glimmerT_30841-T1
Couldn't classify 155486, 155537
Sorry, prediction pasa_asmbl_7982.p1 fails validation.
(CAC)	 GT	155486-155537	GT	CGG
(CCT)	 AG	155695-155941	GT	AGG
(GGG)	 AG	156339-156519	GT	GAG
(GAG)	 AG	156615-156735	GT	AGG
(ACT)	 AG	157878-157993	GT	CTG
(CTC)	 AG	158350-158436	AA	GAA
-recovered pasa_asmbl_7982.p1, terminal, 155695, 155941
-recovered pasa_asmbl_7982.p1, terminal, 158350, 158436
-recovered pasa_asmbl_7982.p1, internal, 155695, 155941
-recovered pasa_asmbl_7982.p1, internal, 156339, 156519
-recovered pasa_asmbl_7982.p1, internal, 156615, 156735
-recovered pasa_asmbl_7982.p1, internal, 157878, 157993
Valid prediction for GlimmerHMM_glimmerT_30838-T1
Valid prediction for GeneMark_model.53191_t
Valid prediction for Augustus_model.g20568.t1
Valid prediction for snap_scaffold_12-snap.2266-T1
Valid prediction for HiQ_model.g20563.t1
Valid prediction for pasa_asmbl_8001.p1
Valid prediction for GlimmerHMM_glimmerT_30832-T1
Valid prediction for Augustus_model.g20574.t1
Valid prediction for snap_scaffold_12-snap.2307-T1
Valid prediction for CodingQuarry_transcript_10379-T1
Valid prediction for snap_scaffold_12-snap.2280-T1
Valid prediction for snap_scaffold_12-snap.2292-T1
Valid prediction for CodingQuarry_transcript_10395-T1
Couldn't classify 65797, 66615
Sorry, prediction pasa_asmbl_8329.p2 fails validation.
(TGC)	 CC	65797-66615	AA	GAA
Valid prediction for snap_scaffold_12-snap.2308-T1
Couldn't classify 125095, 125448
Couldn't classify 126273, 126523
Sorry, prediction pasa_asmbl_8002.p1 fails validation.
(TCT)	 TC	125095-125448	GT	AGG
(GGA)	 AG	125556-125733	GT	AGG
(CTC)	 AG	125994-126119	GT	CGG
(GTG)	 AG	126273-126523	GG	CTG
add_exon() Sorry, pasa_asmbl_8002.p1 125556-125733-terminal-3 is invalid.
-recovered pasa_asmbl_8002.p1, terminal, 125556, 125733
-recovered pasa_asmbl_8002.p1, internal, 125556, 125733
-recovered pasa_asmbl_8002.p1, internal, 125994, 126119
Valid prediction for Augustus_model.g20576.t1
Couldn't classify 41361, 41386
Couldn't classify 42745, 42879
Sorry, prediction pasa_asmbl_8014.p1 fails validation.
(CTG)	 AG	41361-41386	GT	AGG
(GAA)	 AG	41672-41852	GT	AGG
(CCT)	 AG	42745-42879	AC	ACA
-recovered pasa_asmbl_8014.p1, internal, 41361, 41386
-recovered pasa_asmbl_8014.p1, internal, 41672, 41852
Valid prediction for GeneMark_model.53173_t
Valid prediction for Augustus_model.g20551.t1
Valid prediction for GlimmerHMM_glimmerT_30839-T1
Valid prediction for GeneMark_model.53182_t
Couldn't classify 95407, 95713
Sorry, prediction pasa_asmbl_8006.p1 fails validation.
(GCT)	 TG	95407-95713	GT	AGG
(ATG)	 AG	96201-96383	GT	AGG
(CTA)	 AG	96540-96657	GT	AAG
(GAC)	 AG	96818-96919	GT	AGG
(TGA)	 AG	97137-97260	GT	AGG
(GTG)	 AG	97524-97585	GT	GAG
(TGA)	 AG	97744-97879	GT	AGG
(CTC)	 AG	97970-98071	GT	AGG
(GCA)	 AG	98156-98272	GT	AGG
(GAG)	 AG	98374-98541	GT	AGG
(GAC)	 AG	98622-98719	GT	AGG
(GTT)	 AG	98806-98925	GT	AGG
(GCT)	 AG	98998-99127	GT	CGG
(GAG)	 AG	99222-99316	GT	CAG
(GTC)	 AG	99422-99470	GT	AGG
(GGC)	 AG	99574-99651	GT	AGG
(CAC)	 AG	99763-99903	CA	GAC
add_exon() Sorry, pasa_asmbl_8006.p1 96201-96383-initial-1 is invalid.
-recovered pasa_asmbl_8006.p1, initial, 96201, 96383
-recovered pasa_asmbl_8006.p1, terminal, 99763, 99903
-recovered pasa_asmbl_8006.p1, internal, 96201, 96383
-recovered pasa_asmbl_8006.p1, internal, 96540, 96657
-recovered pasa_asmbl_8006.p1, internal, 96818, 96919
-recovered pasa_asmbl_8006.p1, internal, 97137, 97260
-recovered pasa_asmbl_8006.p1, internal, 97524, 97585
-recovered pasa_asmbl_8006.p1, internal, 97744, 97879
-recovered pasa_asmbl_8006.p1, internal, 97970, 98071
-recovered pasa_asmbl_8006.p1, internal, 98156, 98272
-recovered pasa_asmbl_8006.p1, internal, 98374, 98541
-recovered pasa_asmbl_8006.p1, internal, 98622, 98719
-recovered pasa_asmbl_8006.p1, internal, 98806, 98925
-recovered pasa_asmbl_8006.p1, internal, 98998, 99127
-recovered pasa_asmbl_8006.p1, internal, 99222, 99316
-recovered pasa_asmbl_8006.p1, internal, 99422, 99470
-recovered pasa_asmbl_8006.p1, internal, 99574, 99651
Valid prediction for snap_scaffold_12-snap.2275-T1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 16828, rend_intergenic: 12764  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 24678, rend_intergenic: 20342  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 29493, rend_intergenic: 24862  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 33462, rend_intergenic: 30352  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 40866, rend_intergenic: 36444  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 68157, rend_intergenic: 53055  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 79756, rend_intergenic: 76579  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 94548, rend_intergenic: 81081  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 109486, rend_intergenic: 105546  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 119694, rend_intergenic: 115249  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 131478, rend_intergenic: 119732  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 147211, rend_intergenic: 145897  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 165007, rend_intergenic: 159337  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 178164, rend_intergenic: 174152  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 204889
-exon list size: 817


building trellis

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21.7    
21.9    
22.0    
22.1    
22.2    
22.3    
22.5    
22.6    
22.7    
22.8    
23.0    
23.1    
23.2    
23.3    
23.4    
23.6    
23.7    
23.8    
23.9    
24.1    
24.2    
24.3    
24.4    
24.5    
24.7    
24.8    
24.9    
25.0    
25.2    
25.3    
25.4    
25.5    
25.6    
25.8    
25.9    
26.0    
26.1    
26.3    
26.4    
26.5    
26.6    
26.7    
26.9    
27.0    
27.1    
27.2    
27.4    
27.5    
27.6    
27.7    
27.8    
28.0    
28.1    
28.2    
28.3    
28.4    
28.6    
28.7    
28.8    
28.9    
29.1    
29.2    
29.3    
29.4    
29.5    
29.7    
29.8    
29.9    
30.0    
30.2    
30.3    
30.4    
30.5    
30.6    
30.8    
30.9    
31.0    
31.1    
31.3    
31.4    
31.5    
31.6    
31.7    
31.9    
32.0    
32.1    
32.2    
32.4    
32.5    
32.6    
32.7    
32.8    
33.0    
33.1    
33.2    
33.3    
33.5    
33.6    
33.7    
33.8    
33.9    
34.1    
34.2    
34.3    
34.4    
34.6    
34.7    
34.8    
34.9    
35.0    
35.2    
35.3    
35.4    
35.5    
35.7    
35.8    
35.9    
36.0    
36.1    
36.3    
36.4    
36.5    
36.6    
36.8    
36.9    
37.0    
37.1    
37.2    
37.4    
37.5    
37.6    
37.7    
37.9    
38.0    
38.1    
38.2    
38.3    
38.5    
38.6    
38.7    
38.8    
38.9    
39.1    
39.2    
39.3    
39.4    
39.6    
39.7    
39.8    
39.9    
40.0    
40.2    
40.3    
40.4    
40.5    
40.7    
40.8    
40.9    
41.0    
41.1    
41.3    
41.4    
41.5    
41.6    
41.8    
41.9    
42.0    
42.1    
42.2    
42.4    
42.5    
42.6    
42.7    
42.9    
43.0    
43.1    
43.2    
43.3    
43.5    
43.6    
43.7    
43.8    
44.0    
44.1    
44.2    
44.3    
44.4    
44.6    
44.7    
44.8    
44.9    
45.1    
45.2    
45.3    
45.4    
45.5    
45.7    
45.8    
45.9    
46.0    
46.2    
46.3    
46.4    
46.5    
46.6    
46.8    
46.9    
47.0    
47.1    
47.3    
47.4    
47.5    
47.6    
47.7    
47.9    
48.0    
48.1    
48.2    
48.4    
48.5    
48.6    
48.7    
48.8    
49.0    
49.1    
49.2    
49.3    
49.5    
49.6    
49.7    
49.8    
49.9    
50.1    
50.2    
50.3    
50.4    
50.5    
50.7    
50.8    
50.9    
51.0    
51.2    
51.3    
51.4    
51.5    
51.6    
51.8    
51.9    
52.0    
52.1    
52.3    
52.4    
52.5    
52.6    
52.7    
52.9    
53.0    
53.1    
53.2    
53.4    
53.5    
53.6    
53.7    
53.8    
54.0    
54.1    
54.2    
54.3    
54.5    
54.6    
54.7    
54.8    
54.9    
55.1    
55.2    
55.3    
55.4    
55.6    
55.7    
55.8    
55.9    
56.0    
56.2    
56.3    
56.4    
56.5    
56.7    
56.8    
56.9    
57.0    
57.1    
57.3    
57.4    
57.5    
57.6    
57.8    
57.9    
58.0    
58.1    
58.2    
58.4    
58.5    
58.6    
58.7    
58.9    
59.0    
59.1    
59.2    
59.3    
59.5    
59.6    
59.7    
59.8    
60.0    
60.1    
60.2    
60.3    
60.4    
60.6    
60.7    
60.8    
60.9    
61.1    
61.2    
61.3    
61.4    
61.5    
61.7    
61.8    
61.9    
62.0    
62.1    
62.3    
62.4    
62.5    
62.6    
62.8    
62.9    
63.0    
63.1    
63.2    
63.4    
63.5    
63.6    
63.7    
63.9    
64.0    
64.1    
64.2    
64.3    
64.5    
64.6    
64.7    
64.8    
65.0    
65.1    
65.2    
65.3    
65.4    
65.6    
65.7    
65.8    
65.9    
66.1    
66.2    
66.3    
66.4    
66.5    
66.7    
66.8    
66.9    
67.0    
67.2    
67.3    
67.4    
67.5    
67.6    
67.8    
67.9    
68.0    
68.1    
68.3    
68.4    
68.5    
68.6    
68.7    
68.9    
69.0    
69.1    
69.2    
69.4    
69.5    
69.6    
69.7    
69.8    
70.0    
70.1    
70.2    
70.3    
70.5    
70.6    
70.7    
70.8    
70.9    
71.1    
71.2    
71.3    
71.4    
71.6    
71.7    
71.8    
71.9    
72.0    
72.2    
72.3    
72.4    
72.5    
72.6    
72.8    
72.9    
73.0    
73.1    
73.3    
73.4    
73.5    
73.6    
73.7    
73.9    
74.0    
74.1    
74.2    
74.4    
74.5    
74.6    
74.7    
74.8    
75.0    
75.1    
75.2    
75.3    
75.5    
75.6    
75.7    
75.8    
75.9    
76.1    
76.2    
76.3    
76.4    
76.6    
76.7    
76.8    
76.9    
77.0    
77.2    
77.3    
77.4    
77.5    
77.7    
77.8    
77.9    
78.0    
78.1    
78.3    
78.4    
78.5    
78.6    
78.8    
78.9    
79.0    
79.1    
79.2    
79.4    
79.5    
79.6    
79.7    
79.9    
80.0    
80.1    
80.2    
80.3    
80.5    
80.6    
80.7    
80.8    
81.0    
81.1    
81.2    
81.3    
81.4    
81.6    
81.7    
81.8    
81.9    
82.1    
82.2    
82.3    
82.4    
82.5    
82.7    
82.8    
82.9    
83.0    
83.2    
83.3    
83.4    
83.5    
83.6    
83.8    
83.9    
84.0    
84.1    
84.2    
84.4    
84.5    
84.6    
84.7    
84.9    
85.0    
85.1    
85.2    
85.3    
85.5    
85.6    
85.7    
85.8    
86.0    
86.1    
86.2    
86.3    
86.4    
86.6    
86.7    
86.8    
86.9    
87.1    
87.2    
87.3    
87.4    
87.5    
87.7    
87.8    
87.9    
88.0    
88.2    
88.3    
88.4    
88.5    
88.6    
88.8    
88.9    
89.0    
89.1    
89.3    
89.4    
89.5    
89.6    
89.7    
89.9    
90.0    
90.1    
90.2    
90.4    
90.5    
90.6    
90.7    
90.8    
91.0    
91.1    
91.2    
91.3    
91.5    
91.6    
91.7    
91.8    
91.9    
92.1    
92.2    
92.3    
92.4    
92.6    
92.7    
92.8    
92.9    
93.0    
93.2    
93.3    
93.4    
93.5    
93.7    
93.8    
93.9    
94.0    
94.1    
94.3    
94.4    
94.5    
94.6    
94.7    
94.9    
95.0    
95.1    
95.2    
95.4    
95.5    
95.6    
95.7    
95.8    
96.0    
96.1    
96.2    
96.3    
96.5    
96.6    
96.7    
96.8    
96.9    
97.1    
97.2    
97.3    
97.4    
97.6    
97.7    
97.8    
97.9    
98.0    
98.2    
98.3    
98.4    
98.5    
98.7    
98.8    
98.9    
99.0    
99.1    
99.3    
99.4    
99.5    
99.6    
99.8    
99.9    
-found 41 predictions from path traversal
Error with prediction: snap lend_intergenic: 16828, rend_intergenic: 12764  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 24678, rend_intergenic: 20342  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 29493, rend_intergenic: 24862  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 33462, rend_intergenic: 30352  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 40866, rend_intergenic: 36444  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 68157, rend_intergenic: 53055  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 79756, rend_intergenic: 76579  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 94548, rend_intergenic: 81081  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 109486, rend_intergenic: 105546  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 119694, rend_intergenic: 115249  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 131478, rend_intergenic: 119732  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 147211, rend_intergenic: 145897  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 165007, rend_intergenic: 159337  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 178164, rend_intergenic: 174152  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 27 predictions persist after filtering for low support