-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_1182

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Couldn't classify 2958, 2978
Sorry, prediction GeneMark_model.109005_t fails validation.
(ATG)	 AA	2157-2161	GT	GAG
(AAA)	 AG	2217-2819	GT	GGG
(GAG)	 AG	2958-2978	GT	ATG
-recovered GeneMark_model.109005_t, initial, 2157, 2161
-recovered GeneMark_model.109005_t, internal, 2217, 2819
-recovered GeneMark_model.109005_t, internal, 2958, 2978

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Couldn't classify 2769, 2880
Sorry, prediction Augustus_model.g41566.t1 fails validation.
(ATG)	 CG	2636-2660	GT	TGG
(GTT)	 AG	2769-2880	GT	AAG
-recovered Augustus_model.g41566.t1, initial, 2636, 2660
-recovered Augustus_model.g41566.t1, internal, 2769, 2880

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 3015
-exon list size: 8


building trellis

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-found 1 predictions from path traversal

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support