-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_1132

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for snap_scaffold_1132-snap.1-T1
add_exon() Sorry, snap_scaffold_1132-snap.1-T1 2835-3034-terminal-1 is invalid.
Couldn't classify 206, 238
Sorry, prediction GeneMark_model.108942_t fails validation.
(TGT)	 AG	206-238	GC	GGG
(GCT)	 AG	260-386	AG	AAA
-recovered GeneMark_model.108942_t, terminal, 260, 386
-recovered GeneMark_model.108942_t, internal, 206, 238

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)
-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 3191
-exon list size: 2


building trellis

25.0    
50.0    
75.0    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support