-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_11/scaffold_11_8593220-8799293 -reading genomic sequence. ** Processing features (+) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: +) -loading gene prediction evidence. (strand: +)Valid prediction for snap_scaffold_11-snap.1957-T1 Valid prediction for GeneMark_model.48632_t Valid prediction for pasa_asmbl_5790.p1 Valid prediction for CodingQuarry_transcript_8143-T1 Valid prediction for GlimmerHMM_glimmerT_28162-T1 Valid prediction for HiQ_model.g18773.t1 Valid prediction for GeneMark_model.48664_t Valid prediction for snap_scaffold_11-snap.1961-T1 Valid prediction for GeneMark_model.48658_t Valid prediction for GeneMark_model.48646_t Valid prediction for snap_scaffold_11-snap.1967-T1 Valid prediction for GeneMark_model.48643_t Valid prediction for GlimmerHMM_glimmerT_28144-T1 Valid prediction for snap_scaffold_11-snap.1993-T1 Couldn't classify 183578, 183771 Couldn't classify 188380, 188432 Sorry, prediction pasa_asmbl_6292.p1 fails validation. (GAG) TA 183578-183771 GT AGG (GTA) AG 185019-185101 GT AGG (GTT) AG 186776-186881 GT AGG (GTT) AG 187264-187508 GT GGG (GTG) AG 188380-188432 AG TCA -recovered pasa_asmbl_6292.p1, internal, 185019, 185101 -recovered pasa_asmbl_6292.p1, internal, 186776, 186881 -recovered pasa_asmbl_6292.p1, internal, 187264, 187508 Valid prediction for GlimmerHMM_glimmerT_28150-T1 Valid prediction for GlimmerHMM_glimmerT_28153-T1 Valid prediction for GlimmerHMM_glimmerT_28155-T1 Valid prediction for GlimmerHMM_glimmerT_28165-T1 Valid prediction for pasa_asmbl_5788.p1 Valid prediction for pasa_asmbl_5780.p1 Valid prediction for GeneMark_model.48661_t Valid prediction for GlimmerHMM_glimmerT_28140-T1 Valid prediction for GlimmerHMM_glimmerT_28151-T1 Couldn't classify 28096, 28156 Sorry, prediction pasa_asmbl_5778.p2 fails validation. (GCT) AC 28096-28156 GT AGG (GTT) AG 28255-28374 GT AGG (GAA) AG 28458-28548 GT AGG (GGC) AG 28666-28753 AT AAA -recovered pasa_asmbl_5778.p2, terminal, 28666, 28753 -recovered pasa_asmbl_5778.p2, internal, 28255, 28374 -recovered pasa_asmbl_5778.p2, internal, 28458, 28548 Valid prediction for snap_scaffold_11-snap.1994-T1 Valid prediction for GlimmerHMM_glimmerT_28161-T1 Valid prediction for GlimmerHMM_glimmerT_28163-T1 Valid prediction for snap_scaffold_11-snap.1973-T1 Valid prediction for GlimmerHMM_glimmerT_28157-T1 Valid prediction for snap_scaffold_11-snap.1969-T1 Valid prediction for GlimmerHMM_glimmerT_28156-T1 Valid prediction for HiQ_model.g18781.t1 Valid prediction for pasa_asmbl_5784.p1 Valid prediction for Augustus_model.g18769.t1 Valid prediction for snap_scaffold_11-snap.1959-T1 Valid prediction for pasa_asmbl_5779.p1 Valid prediction for CodingQuarry_transcript_8145-T1 Valid prediction for CodingQuarry_transcript_8147-T1 Valid prediction for snap_scaffold_11-snap.1971-T1 Valid prediction for GeneMark_model.48635_t Valid prediction for CodingQuarry_transcript_8153-T1 Valid prediction for CodingQuarry_transcript_8155-T1 Valid prediction for GeneMark_model.48655_t Valid prediction for Augustus_model.g18789.t1 Couldn't classify 96478, 96703 Couldn't classify 96808, 96914 Sorry, prediction pasa_asmbl_6271.p1 fails validation. (CGT) AG 96478-96703 GT AGG (GGC) AG 96808-96914 AC GCA -recovered pasa_asmbl_6271.p1, internal, 96478, 96703 Valid prediction for GlimmerHMM_glimmerT_28146-T1 Valid prediction for GlimmerHMM_glimmerT_28134-T1 Valid prediction for CodingQuarry_transcript_8149-T1 Valid prediction for pasa_asmbl_5783.p1 Valid prediction for pasa_asmbl_5768.p1 Valid prediction for GlimmerHMM_glimmerT_28148-T1 Valid prediction for GeneMark_model.48644_t Valid prediction for Augustus_model.g18770.t1 Valid prediction for Augustus_model.g18790.t1 Couldn't classify 173173, 173341 Couldn't classify 179405, 179460 Sorry, prediction pasa_asmbl_5801.p1 fails validation. (TGG) AG 173173-173341 GT AGG (GTA) AG 173704-173787 GT AGG (ATG) AG 174311-174423 GT AGG (GTG) AG 174934-175033 GT AGG (GAA) AG 176277-176327 GT AGG (GGT) AG 176808-176855 GT AGG (TCT) AG 178670-178759 GT TGG (AGA) AG 179405-179460 AA AAA -recovered pasa_asmbl_5801.p1, initial, 174311, 174423 -recovered pasa_asmbl_5801.p1, internal, 173173, 173341 -recovered pasa_asmbl_5801.p1, internal, 173704, 173787 -recovered pasa_asmbl_5801.p1, internal, 174311, 174423 -recovered pasa_asmbl_5801.p1, internal, 174934, 175033 -recovered pasa_asmbl_5801.p1, internal, 176277, 176327 -recovered pasa_asmbl_5801.p1, internal, 176808, 176855 -recovered pasa_asmbl_5801.p1, internal, 178670, 178759 Valid prediction for CodingQuarry_transcript_8141-T1 Valid prediction for Augustus_model.g18786.t1 Valid prediction for HiQ_model.g18785.t1 Valid prediction for GeneMark_model.48639_t Valid prediction for snap_scaffold_11-snap.1991-T1 Couldn't classify 104778, 104864 Couldn't classify 105140, 105376 Sorry, prediction pasa_asmbl_6215.p1 fails validation. (TCG) CC 104778-104864 GT AGG (GTG) AG 105140-105376 AG ACA Valid prediction for GlimmerHMM_glimmerT_28135-T1 Valid prediction for GeneMark_model.48671_t Valid prediction for CodingQuarry_transcript_8146-T1 Valid prediction for GeneMark_model.48672_t Valid prediction for CodingQuarry_transcript_8157-T1 Valid prediction for HiQ_model.g18767.t1 Valid prediction for pasa_asmbl_5793.p2 Valid prediction for GlimmerHMM_glimmerT_28145-T1 Valid prediction for GlimmerHMM_glimmerT_28137-T1 Valid prediction for GlimmerHMM_glimmerT_28138-T1 Valid prediction for snap_scaffold_11-snap.1998-T1 Valid prediction for HiQ_model.g18766.t1 Valid prediction for HiQ_model.g18774.t1 Valid prediction for GeneMark_model.48651_t Valid prediction for GlimmerHMM_glimmerT_28158-T1 Valid prediction for CodingQuarry_transcript_8154-T1 Valid prediction for GeneMark_model.48656_t Valid prediction for CodingQuarry_transcript_8156-T1 Valid prediction for Augustus_model.g18776.t1 Valid prediction for snap_scaffold_11-snap.1958-T1 Valid prediction for pasa_asmbl_5775.p1 Valid prediction for GlimmerHMM_glimmerT_28141-T1 Valid prediction for CodingQuarry_transcript_8140-T1 Valid prediction for GlimmerHMM_glimmerT_28147-T1 Valid prediction for GeneMark_model.48662_t Valid prediction for snap_scaffold_11-snap.1988-T1 Valid prediction for GeneMark_model.48674_t Valid prediction for snap_scaffold_11-snap.1968-T1 Valid prediction for Augustus_model.g18788.t1 Valid prediction for GeneMark_model.48649_t Valid prediction for GeneMark_model.48653_t Valid prediction for Augustus_model.g18777.t1 Valid prediction for GeneMark_model.48637_t Valid prediction for snap_scaffold_11-snap.1956-T1 Valid prediction for CodingQuarry_transcript_8142-T1 Valid prediction for GeneMark_model.48636_t Valid prediction for snap_scaffold_11-snap.1982-T1 Valid prediction for snap_scaffold_11-snap.1970-T1 Valid prediction for snap_scaffold_11-snap.1977-T1 Valid prediction for GlimmerHMM_glimmerT_28164-T1 Valid prediction for GeneMark_model.48647_t Valid prediction for GlimmerHMM_glimmerT_28159-T1 Couldn't classify 106761, 106958 Couldn't classify 108146, 108205 Sorry, prediction pasa_asmbl_5786.p2 fails validation. (CAG) AG 106761-106958 GT TGG (GAC) AG 107187-107398 GT AGG (ACA) AG 107771-107936 GT AGG (GTG) AG 108146-108205 GT AGG add_exon() Sorry, pasa_asmbl_5786.p2 107187-107398-terminal-2 is invalid. -recovered pasa_asmbl_5786.p2, terminal, 107187, 107398 -recovered pasa_asmbl_5786.p2, internal, 106761, 106958 -recovered pasa_asmbl_5786.p2, internal, 107187, 107398 -recovered pasa_asmbl_5786.p2, internal, 107771, 107936 -recovered pasa_asmbl_5786.p2, internal, 108146, 108205 Valid prediction for GeneMark_model.48631_t Valid prediction for GeneMark_model.48634_t Valid prediction for Augustus_model.g18783.t1 Couldn't classify 50996, 53317 Couldn't classify 53588, 54022 Sorry, prediction CodingQuarry_transcript_8148-T1 fails validation. (ATG) AA 45976-46114 GT AGG (ATG) AG 47039-47115 GT AGG (TAC) AG 47245-47355 GT ACG (GTG) AG 47445-47735 GT AGG (GCA) AG 48098-48166 GT ACG (GAT) AG 48545-48710 GT CGG (GCA) AG 49099-49419 GT AGG (ATG) AG 50067-50107 GT AGG (AGT) AG 50254-50349 GT AGG (CTG) AG 50533-50721 GT AGG (CAC) AG 50996-53317 CT AGC (CAC) AC 53588-54022 GT AGG (GGG) AG 54355-54495 GT AGG (TTG) AG 55374-55567 GT AGG (CCA) AG 55836-55999 GC AGG (AAG) AG 56498-56601 GT AGG (GTG) AG 56900-56999 GT AGG (TGG) AG 58350-58431 GT AAG (AGT) AG 58732-58846 GT AGG (ATG) AG 60634-60756 GT CGG (TCA) AG 60898-61036 GT AGG (GAG) AG 61159-61376 TG AGT -recovered CodingQuarry_transcript_8148-T1, initial, 45976, 46114 -recovered CodingQuarry_transcript_8148-T1, initial, 47039, 47115 -recovered CodingQuarry_transcript_8148-T1, initial, 50067, 50107 -recovered CodingQuarry_transcript_8148-T1, initial, 60634, 60756 -recovered CodingQuarry_transcript_8148-T1, terminal, 58350, 58431 -recovered CodingQuarry_transcript_8148-T1, terminal, 61159, 61376 -recovered CodingQuarry_transcript_8148-T1, internal, 47039, 47115 -recovered CodingQuarry_transcript_8148-T1, internal, 47245, 47355 -recovered CodingQuarry_transcript_8148-T1, internal, 47445, 47735 -recovered CodingQuarry_transcript_8148-T1, internal, 48098, 48166 -recovered CodingQuarry_transcript_8148-T1, internal, 48545, 48710 -recovered CodingQuarry_transcript_8148-T1, internal, 49099, 49419 -recovered CodingQuarry_transcript_8148-T1, internal, 50067, 50107 -recovered CodingQuarry_transcript_8148-T1, internal, 50254, 50349 -recovered CodingQuarry_transcript_8148-T1, internal, 50533, 50721 -recovered CodingQuarry_transcript_8148-T1, internal, 54355, 54495 -recovered CodingQuarry_transcript_8148-T1, internal, 55374, 55567 -recovered CodingQuarry_transcript_8148-T1, internal, 55836, 55999 -recovered CodingQuarry_transcript_8148-T1, internal, 56498, 56601 -recovered CodingQuarry_transcript_8148-T1, internal, 56900, 56999 -recovered CodingQuarry_transcript_8148-T1, internal, 58350, 58431 -recovered CodingQuarry_transcript_8148-T1, internal, 58732, 58846 -recovered CodingQuarry_transcript_8148-T1, internal, 60634, 60756 -recovered CodingQuarry_transcript_8148-T1, internal, 60898, 61036 Couldn't classify 265, 450 Sorry, prediction pasa_asmbl_5767.p2 fails validation. (ATT) AT 265-450 GT ATG (GTT) AG 793-933 CT GAC -recovered pasa_asmbl_5767.p2, terminal, 793, 933 Valid prediction for CodingQuarry_transcript_8151-T1 Couldn't classify 108578, 108631 Sorry, prediction pasa_asmbl_5787.p2 fails validation. (TGC) AC 108578-108631 GT ACG (GCC) AG 108730-108780 GT AGG (ATC) AG 109038-109250 CT AAC -recovered pasa_asmbl_5787.p2, terminal, 109038, 109250 -recovered pasa_asmbl_5787.p2, internal, 108730, 108780 Valid prediction for snap_scaffold_11-snap.1990-T1 Valid prediction for GeneMark_model.48642_t Valid prediction for snap_scaffold_11-snap.1997-T1 Valid prediction for snap_scaffold_11-snap.1996-T1 Valid prediction for HiQ_model.g18775.t1 Valid prediction for GeneMark_model.48665_t Valid prediction for GeneMark_model.48660_t Valid prediction for snap_scaffold_11-snap.1983-T1 Valid prediction for snap_scaffold_11-snap.1981-T1 Valid prediction for snap_scaffold_11-snap.1963-T1 Valid prediction for GeneMark_model.48630_t Valid prediction for Augustus_model.g18784.t1 Valid prediction for GeneMark_model.48667_t Valid prediction for snap_scaffold_11-snap.1964-T1 Valid prediction for GeneMark_model.48669_t Valid prediction for GeneMark_model.48640_t Valid prediction for HiQ_model.g18772.t1 Valid prediction for GlimmerHMM_glimmerT_28143-T1 Valid prediction for Augustus_model.g18779.t1 Valid prediction for GlimmerHMM_glimmerT_28142-T1 Couldn't classify 196933, 197047 Couldn't classify 197071, 197390 Sorry, prediction CodingQuarry_transcript_8158-T1 fails validation. (ATG) TC 196933-197047 CT ACC (CTC) AC 197071-197390 GA GAG Valid prediction for pasa_asmbl_5798.p1 Valid prediction for snap_scaffold_11-snap.1962-T1 -loading the search evidence (protein and EST search results, strand: +) -scoring exons (strand: +) ** Processing features (-) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: -) -loading gene prediction evidence. (strand: -)Valid prediction for GeneMark_model.48654_t Valid prediction for snap_scaffold_11-snap.1960-T1 Valid prediction for HiQ_model.g18771.t1 Couldn't classify 23377, 23733 Sorry, prediction pasa_asmbl_5804.p1 fails validation. (ACA) CC 23377-23733 GT GGG Valid prediction for snap_scaffold_11-snap.1989-T1 Valid prediction for GeneMark_model.48676_t Valid prediction for GeneMark_model.48663_t Valid prediction for snap_scaffold_11-snap.1992-T1 Valid prediction for GeneMark_model.48633_t Valid prediction for snap_scaffold_11-snap.1972-T1 Valid prediction for GeneMark_model.48675_t Valid prediction for snap_scaffold_11-snap.1995-T1 Valid prediction for snap_scaffold_11-snap.1975-T1 Valid prediction for CodingQuarry_transcript_8144-T1 Valid prediction for Augustus_model.g18768.t1 Valid prediction for GlimmerHMM_glimmerT_28152-T1 Valid prediction for snap_scaffold_11-snap.1980-T1 Valid prediction for Augustus_model.g18778.t1 Valid prediction for Augustus_model.g18791.t1 Valid prediction for GeneMark_model.48652_t Valid prediction for CodingQuarry_transcript_8150-T1 Valid prediction for GeneMark_model.48666_t Valid prediction for GeneMark_model.48641_t Valid prediction for GlimmerHMM_glimmerT_28139-T1 Valid prediction for GlimmerHMM_glimmerT_28149-T1 Valid prediction for GeneMark_model.48648_t Valid prediction for HiQ_model.g18782.t1 Valid prediction for GeneMark_model.48673_t Valid prediction for snap_scaffold_11-snap.1976-T1 Valid prediction for snap_scaffold_11-snap.1987-T1 Valid prediction for snap_scaffold_11-snap.1979-T1 Valid prediction for snap_scaffold_11-snap.1984-T1 Valid prediction for GeneMark_model.48645_t Couldn't classify 91035, 91165 Sorry, prediction pasa_asmbl_6849.p1 fails validation. (AGA) CC 91035-91165 GT AGG (AAA) AG 91772-91890 GT AGG (GGG) AG 92157-92312 GT CGG (AGG) AG 92437-92541 GT GGG (GTC) AG 92811-93020 GT AGG (GCT) AG 93493-93682 GT AGG (TGA) AG 93934-94036 AC GAA -recovered pasa_asmbl_6849.p1, terminal, 93934, 94036 -recovered pasa_asmbl_6849.p1, internal, 91772, 91890 -recovered pasa_asmbl_6849.p1, internal, 92157, 92312 -recovered pasa_asmbl_6849.p1, internal, 92437, 92541 -recovered pasa_asmbl_6849.p1, internal, 92811, 93020 -recovered pasa_asmbl_6849.p1, internal, 93493, 93682 Valid prediction for pasa_asmbl_6853.p1 Valid prediction for Augustus_model.g18787.t1 Valid prediction for CodingQuarry_transcript_8152-T1 Valid prediction for pasa_asmbl_6847.p1 Valid prediction for snap_scaffold_11-snap.1978-T1 Valid prediction for GeneMark_model.48650_t Valid prediction for GlimmerHMM_glimmerT_28167-T1 Valid prediction for GlimmerHMM_glimmerT_28166-T1 Valid prediction for snap_scaffold_11-snap.1986-T1 Valid prediction for GeneMark_model.48670_t Valid prediction for GlimmerHMM_glimmerT_28160-T1 Valid prediction for GlimmerHMM_glimmerT_28154-T1 Valid prediction for GlimmerHMM_glimmerT_28136-T1 Valid prediction for snap_scaffold_11-snap.1974-T1 Sorry, intron length (3) is less than minimum required (10) Sorry, intron length (9) is less than minimum required (10) Valid prediction for HiQ_model.g18780.t1 Valid prediction for GeneMark_model.48657_t Valid prediction for snap_scaffold_11-snap.1965-T1 Sorry, intron length (3) is less than minimum required (10) Valid prediction for snap_scaffold_11-snap.1985-T1 Valid prediction for GeneMark_model.48638_t Valid prediction for GeneMark_model.48668_t Valid prediction for snap_scaffold_11-snap.1966-T1 -loading the search evidence (protein and EST search results, strand: -) -scoring exons (strand: -)Error with prediction: snap lend_intergenic: 61376, rend_intergenic: 51016 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 105438, rend_intergenic: 97624 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 107914, rend_intergenic: 106112 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 149352, rend_intergenic: 145172 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 178061, rend_intergenic: 173210 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 178954, rend_intergenic: 178086 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 189527, rend_intergenic: 184831 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 195956, rend_intergenic: 189746 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -building DP trellis -building trellis in range 1 - 206074 -exon list size: 852 building trellis 0.1 0.2 0.4 0.5 0.6 0.7 0.8 0.9 1.1 1.2 1.3 1.4 1.5 1.6 1.8 1.9 2.0 2.1 2.2 2.3 2.5 2.6 2.7 2.8 2.9 3.0 3.2 3.3 3.4 3.5 3.6 3.7 3.9 4.0 4.1 4.2 4.3 4.4 4.6 4.7 4.8 4.9 5.0 5.2 5.3 5.4 5.5 5.6 5.7 5.9 6.0 6.1 6.2 6.3 6.4 6.6 6.7 6.8 6.9 7.0 7.1 7.3 7.4 7.5 7.6 7.7 7.8 8.0 8.1 8.2 8.3 8.4 8.5 8.7 8.8 8.9 9.0 9.1 9.3 9.4 9.5 9.6 9.7 9.8 10.0 10.1 10.2 10.3 10.4 10.5 10.7 10.8 10.9 11.0 11.1 11.2 11.4 11.5 11.6 11.7 11.8 11.9 12.1 12.2 12.3 12.4 12.5 12.6 12.8 12.9 13.0 13.1 13.2 13.3 13.5 13.6 13.7 13.8 13.9 14.1 14.2 14.3 14.4 14.5 14.6 14.8 14.9 15.0 15.1 15.2 15.3 15.5 15.6 15.7 15.8 15.9 16.0 16.2 16.3 16.4 16.5 16.6 16.7 16.9 17.0 17.1 17.2 17.3 17.4 17.6 17.7 17.8 17.9 18.0 18.1 18.3 18.4 18.5 18.6 18.7 18.9 19.0 19.1 19.2 19.3 19.4 19.6 19.7 19.8 19.9 20.0 20.1 20.3 20.4 20.5 20.6 20.7 20.8 21.0 21.1 21.2 21.3 21.4 21.5 21.7 21.8 21.9 22.0 22.1 22.2 22.4 22.5 22.6 22.7 22.8 23.0 23.1 23.2 23.3 23.4 23.5 23.7 23.8 23.9 24.0 24.1 24.2 24.4 24.5 24.6 24.7 24.8 24.9 25.1 25.2 25.3 25.4 25.5 25.6 25.8 25.9 26.0 26.1 26.2 26.3 26.5 26.6 26.7 26.8 26.9 27.0 27.2 27.3 27.4 27.5 27.6 27.8 27.9 28.0 28.1 28.2 28.3 28.5 28.6 28.7 28.8 28.9 29.0 29.2 29.3 29.4 29.5 29.6 29.7 29.9 30.0 30.1 30.2 30.3 30.4 30.6 30.7 30.8 30.9 31.0 31.1 31.3 31.4 31.5 31.6 31.7 31.9 32.0 32.1 32.2 32.3 32.4 32.6 32.7 32.8 32.9 33.0 33.1 33.3 33.4 33.5 33.6 33.7 33.8 34.0 34.1 34.2 34.3 34.4 34.5 34.7 34.8 34.9 35.0 35.1 35.2 35.4 35.5 35.6 35.7 35.8 35.9 36.1 36.2 36.3 36.4 36.5 36.7 36.8 36.9 37.0 37.1 37.2 37.4 37.5 37.6 37.7 37.8 37.9 38.1 38.2 38.3 38.4 38.5 38.6 38.8 38.9 39.0 39.1 39.2 39.3 39.5 39.6 39.7 39.8 39.9 40.0 40.2 40.3 40.4 40.5 40.6 40.7 40.9 41.0 41.1 41.2 41.3 41.5 41.6 41.7 41.8 41.9 42.0 42.2 42.3 42.4 42.5 42.6 42.7 42.9 43.0 43.1 43.2 43.3 43.4 43.6 43.7 43.8 43.9 44.0 44.1 44.3 44.4 44.5 44.6 44.7 44.8 45.0 45.1 45.2 45.3 45.4 45.6 45.7 45.8 45.9 46.0 46.1 46.3 46.4 46.5 46.6 46.7 46.8 47.0 47.1 47.2 47.3 47.4 47.5 47.7 47.8 47.9 48.0 48.1 48.2 48.4 48.5 48.6 48.7 48.8 48.9 49.1 49.2 49.3 49.4 49.5 49.6 49.8 49.9 50.0 50.1 50.2 50.4 50.5 50.6 50.7 50.8 50.9 51.1 51.2 51.3 51.4 51.5 51.6 51.8 51.9 52.0 52.1 52.2 52.3 52.5 52.6 52.7 52.8 52.9 53.0 53.2 53.3 53.4 53.5 53.6 53.7 53.9 54.0 54.1 54.2 54.3 54.4 54.6 54.7 54.8 54.9 55.0 55.2 55.3 55.4 55.5 55.6 55.7 55.9 56.0 56.1 56.2 56.3 56.4 56.6 56.7 56.8 56.9 57.0 57.1 57.3 57.4 57.5 57.6 57.7 57.8 58.0 58.1 58.2 58.3 58.4 58.5 58.7 58.8 58.9 59.0 59.1 59.3 59.4 59.5 59.6 59.7 59.8 60.0 60.1 60.2 60.3 60.4 60.5 60.7 60.8 60.9 61.0 61.1 61.2 61.4 61.5 61.6 61.7 61.8 61.9 62.1 62.2 62.3 62.4 62.5 62.6 62.8 62.9 63.0 63.1 63.2 63.3 63.5 63.6 63.7 63.8 63.9 64.1 64.2 64.3 64.4 64.5 64.6 64.8 64.9 65.0 65.1 65.2 65.3 65.5 65.6 65.7 65.8 65.9 66.0 66.2 66.3 66.4 66.5 66.6 66.7 66.9 67.0 67.1 67.2 67.3 67.4 67.6 67.7 67.8 67.9 68.0 68.1 68.3 68.4 68.5 68.6 68.7 68.9 69.0 69.1 69.2 69.3 69.4 69.6 69.7 69.8 69.9 70.0 70.1 70.3 70.4 70.5 70.6 70.7 70.8 71.0 71.1 71.2 71.3 71.4 71.5 71.7 71.8 71.9 72.0 72.1 72.2 72.4 72.5 72.6 72.7 72.8 73.0 73.1 73.2 73.3 73.4 73.5 73.7 73.8 73.9 74.0 74.1 74.2 74.4 74.5 74.6 74.7 74.8 74.9 75.1 75.2 75.3 75.4 75.5 75.6 75.8 75.9 76.0 76.1 76.2 76.3 76.5 76.6 76.7 76.8 76.9 77.0 77.2 77.3 77.4 77.5 77.6 77.8 77.9 78.0 78.1 78.2 78.3 78.5 78.6 78.7 78.8 78.9 79.0 79.2 79.3 79.4 79.5 79.6 79.7 79.9 80.0 80.1 80.2 80.3 80.4 80.6 80.7 80.8 80.9 81.0 81.1 81.3 81.4 81.5 81.6 81.7 81.9 82.0 82.1 82.2 82.3 82.4 82.6 82.7 82.8 82.9 83.0 83.1 83.3 83.4 83.5 83.6 83.7 83.8 84.0 84.1 84.2 84.3 84.4 84.5 84.7 84.8 84.9 85.0 85.1 85.2 85.4 85.5 85.6 85.7 85.8 85.9 86.1 86.2 86.3 86.4 86.5 86.7 86.8 86.9 87.0 87.1 87.2 87.4 87.5 87.6 87.7 87.8 87.9 88.1 88.2 88.3 88.4 88.5 88.6 88.8 88.9 89.0 89.1 89.2 89.3 89.5 89.6 89.7 89.8 89.9 90.0 90.2 90.3 90.4 90.5 90.6 90.7 90.9 91.0 91.1 91.2 91.3 91.5 91.6 91.7 91.8 91.9 92.0 92.2 92.3 92.4 92.5 92.6 92.7 92.9 93.0 93.1 93.2 93.3 93.4 93.6 93.7 93.8 93.9 94.0 94.1 94.3 94.4 94.5 94.6 94.7 94.8 95.0 95.1 95.2 95.3 95.4 95.6 95.7 95.8 95.9 96.0 96.1 96.3 96.4 96.5 96.6 96.7 96.8 97.0 97.1 97.2 97.3 97.4 97.5 97.7 97.8 97.9 98.0 98.1 98.2 98.4 98.5 98.6 98.7 98.8 98.9 99.1 99.2 99.3 99.4 99.5 99.6 99.8 99.9 -found 35 predictions from path traversal Error with prediction: snap lend_intergenic: 61376, rend_intergenic: 51016 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 105438, rend_intergenic: 97624 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 107914, rend_intergenic: 106112 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 149352, rend_intergenic: 145172 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 178061, rend_intergenic: 173210 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 178954, rend_intergenic: 178086 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 189527, rend_intergenic: 184831 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 195956, rend_intergenic: 189746 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -reporting highest scoring path thru the trellis. -found 31 predictions persist after filtering for low support -building DP trellis -building trellis in range 195650 - 206074 -exon list size: 32 building trellis 2.9 5.9 8.8 11.8 14.7 17.6 20.6 23.5 26.5 29.4 32.4 35.3 38.2 41.2 44.1 47.1 50.0 52.9 55.9 58.8 61.8 64.7 67.6 70.6 73.5 76.5 79.4 82.4 85.3 88.2 91.2 94.1 97.1 -found 1 predictions from path traversal -reporting highest scoring path thru the trellis. -found 0 predictions persist after filtering for low support -building DP trellis -building trellis in range 195930 - 206074 -exon list size: 30 building trellis 3.1 6.2 9.4 12.5 15.6 18.8 21.9 25.0 28.1 31.2 34.4 37.5 40.6 43.8 46.9 50.0 53.1 56.2 59.4 62.5 65.6 68.8 71.9 75.0 78.1 81.2 84.4 87.5 90.6 93.8 96.9 -found 1 predictions from path traversal -reporting highest scoring path thru the trellis. -found 0 predictions persist after filtering for low support