-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_11/scaffold_11_7685207-7930374

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for GlimmerHMM_glimmerT_28013-T1
Valid prediction for Augustus_model.g18681.t1
Valid prediction for Augustus_model.g18669.t1
Valid prediction for CodingQuarry_transcript_8100-T1
Valid prediction for snap_scaffold_11-snap.1777-T1
Valid prediction for GlimmerHMM_glimmerT_28023-T1
Valid prediction for snap_scaffold_11-snap.1809-T1
Valid prediction for HiQ_model.g18662.t1
Valid prediction for GlimmerHMM_glimmerT_28018-T1
Valid prediction for snap_scaffold_11-snap.1803-T1
Valid prediction for GeneMark_model.48453_t
Valid prediction for CodingQuarry_transcript_8102-T1
Valid prediction for CodingQuarry_transcript_8093-T1
Valid prediction for CodingQuarry_transcript_8094-T1
Valid prediction for GeneMark_model.48413_t
Valid prediction for snap_scaffold_11-snap.1812-T1
Valid prediction for GlimmerHMM_glimmerT_28012-T1
Valid prediction for snap_scaffold_11-snap.1823-T1
Valid prediction for pasa_asmbl_5653.p1
Valid prediction for GlimmerHMM_glimmerT_28020-T1
Valid prediction for GlimmerHMM_glimmerT_28010-T1
Valid prediction for GlimmerHMM_glimmerT_28009-T1
Valid prediction for GlimmerHMM_glimmerT_28025-T1
Valid prediction for GeneMark_model.48427_t
Valid prediction for snap_scaffold_11-snap.1822-T1
Valid prediction for snap_scaffold_11-snap.1785-T1
Sorry, intron length (7) is less than minimum required (10)
Valid prediction for snap_scaffold_11-snap.1796-T1
Valid prediction for snap_scaffold_11-snap.1783-T1
Valid prediction for GeneMark_model.48439_t
Valid prediction for HiQ_model.g18679.t1
Valid prediction for GlimmerHMM_glimmerT_28026-T1
Valid prediction for GeneMark_model.48448_t
Valid prediction for GeneMark_model.48465_t
Couldn't classify 134175, 134258
Sorry, prediction pasa_asmbl_5648.p1 fails validation.
(AGA)	 GC	134175-134258	GT	AGG
(GCA)	 AG	134355-134499	GT	AGG
(GTC)	 AG	136188-136281	GT	TCG
(CAT)	 AG	136508-136646	GT	AGG
(TGT)	 AG	136758-136926	GT	GGG
(TGG)	 AG	137087-137124	AG	GAA
-recovered pasa_asmbl_5648.p1, terminal, 137087, 137124
-recovered pasa_asmbl_5648.p1, internal, 134355, 134499
-recovered pasa_asmbl_5648.p1, internal, 136188, 136281
-recovered pasa_asmbl_5648.p1, internal, 136508, 136646
-recovered pasa_asmbl_5648.p1, internal, 136758, 136926
Valid prediction for GeneMark_model.48432_t
Valid prediction for GeneMark_model.48421_t
Valid prediction for Augustus_model.g18680.t1
Valid prediction for GeneMark_model.48425_t
Valid prediction for GeneMark_model.48452_t
Valid prediction for CodingQuarry_transcript_8101-T1
Valid prediction for pasa_asmbl_5644.p1
Valid prediction for GeneMark_model.48435_t
Valid prediction for snap_scaffold_11-snap.1817-T1
Valid prediction for CodingQuarry_transcript_8099-T1
Valid prediction for Augustus_model.g18656.t1
Valid prediction for snap_scaffold_11-snap.1800-T1
Valid prediction for CodingQuarry_transcript_8105-T1
Valid prediction for GlimmerHMM_glimmerT_28004-T1
Valid prediction for pasa_asmbl_5655.p1
Couldn't classify 223668, 223850
Sorry, prediction pasa_asmbl_5661.p1 fails validation.
(ACA)	 GC	223668-223850	GT	GGG
(TCT)	 AG	223979-224133	GT	TAG
(CTA)	 AG	225818-225946	GT	AGG
(AAT)	 AG	227732-227861	GT	AGG
(AAC)	 AG	227978-228131	GT	TGG
(GTC)	 AG	228527-228717	GA	GAG
-recovered pasa_asmbl_5661.p1, terminal, 228527, 228717
-recovered pasa_asmbl_5661.p1, internal, 223979, 224133
-recovered pasa_asmbl_5661.p1, internal, 225818, 225946
-recovered pasa_asmbl_5661.p1, internal, 227732, 227861
-recovered pasa_asmbl_5661.p1, internal, 227978, 228131
Valid prediction for GeneMark_model.48455_t
Valid prediction for snap_scaffold_11-snap.1815-T1
Valid prediction for snap_scaffold_11-snap.1811-T1
Valid prediction for snap_scaffold_11-snap.1818-T1
Valid prediction for pasa_asmbl_5665.p1
Valid prediction for GlimmerHMM_glimmerT_28001-T1
Valid prediction for CodingQuarry_transcript_8098-T1
Valid prediction for GeneMark_model.48443_t
Valid prediction for GlimmerHMM_glimmerT_28017-T1
Valid prediction for GeneMark_model.48442_t
Valid prediction for snap_scaffold_11-snap.1798-T1
Valid prediction for HiQ_model.g18673.t1
Valid prediction for GeneMark_model.48444_t
Valid prediction for snap_scaffold_11-snap.1802-T1
Valid prediction for snap_scaffold_11-snap.1782-T1
Valid prediction for GlimmerHMM_glimmerT_28016-T1
Valid prediction for GeneMark_model.48446_t
Valid prediction for HiQ_model.g18665.t1
Valid prediction for GeneMark_model.48458_t
Valid prediction for GeneMark_model.48417_t
Valid prediction for Augustus_model.g18666.t1
Valid prediction for HiQ_model.g18675.t1
Valid prediction for GeneMark_model.48461_t
Valid prediction for GlimmerHMM_glimmerT_28008-T1
Valid prediction for snap_scaffold_11-snap.1813-T1
Valid prediction for GeneMark_model.48462_t
Valid prediction for GeneMark_model.48438_t
Valid prediction for GeneMark_model.48451_t
Valid prediction for HiQ_model.g18674.t1
Valid prediction for GlimmerHMM_glimmerT_27996-T1
Valid prediction for snap_scaffold_11-snap.1819-T1
Valid prediction for GlimmerHMM_glimmerT_28007-T1
Valid prediction for GeneMark_model.48429_t
Valid prediction for snap_scaffold_11-snap.1775-T1
Valid prediction for GeneMark_model.48419_t
Valid prediction for pasa_asmbl_5651.p1
Valid prediction for GeneMark_model.48463_t
Valid prediction for snap_scaffold_11-snap.1821-T1
Valid prediction for snap_scaffold_11-snap.1776-T1
Valid prediction for snap_scaffold_11-snap.1792-T1
Valid prediction for GeneMark_model.48460_t
Valid prediction for HiQ_model.g18676.t1
Valid prediction for snap_scaffold_11-snap.1788-T1
Valid prediction for GeneMark_model.48430_t
Valid prediction for GeneMark_model.48436_t
Valid prediction for snap_scaffold_11-snap.1778-T1
Couldn't classify 89593, 89758
Sorry, prediction pasa_asmbl_5646.p1 fails validation.
(AGC)	 AC	89593-89758	GT	AGG
(GAG)	 AG	89850-89956	GT	CTG
(GGC)	 AG	90047-90194	GT	AGG
(ACA)	 AG	90329-90345	GT	CGG
(CCA)	 AG	90464-90580	GT	CAG
(GTG)	 AG	90720-90840	GT	CAG
(GAA)	 AG	91046-91109	GT	GGG
(GGC)	 AG	91206-91254	GT	AGG
(GTG)	 AG	91339-91451	GT	AGG
(CTT)	 AG	91592-91709	GT	AGG
(TGT)	 AG	91796-91895	GT	CAG
(CTG)	 AG	92112-92308	GT	GGG
(GCT)	 AG	92569-92706	GT	AGG
(CAC)	 AG	93147-93233	AC	AAA
-recovered pasa_asmbl_5646.p1, terminal, 93147, 93233
-recovered pasa_asmbl_5646.p1, internal, 89850, 89956
-recovered pasa_asmbl_5646.p1, internal, 90047, 90194
-recovered pasa_asmbl_5646.p1, internal, 90329, 90345
-recovered pasa_asmbl_5646.p1, internal, 90464, 90580
-recovered pasa_asmbl_5646.p1, internal, 90720, 90840
-recovered pasa_asmbl_5646.p1, internal, 91046, 91109
-recovered pasa_asmbl_5646.p1, internal, 91206, 91254
-recovered pasa_asmbl_5646.p1, internal, 91339, 91451
-recovered pasa_asmbl_5646.p1, internal, 91592, 91709
-recovered pasa_asmbl_5646.p1, internal, 91796, 91895
-recovered pasa_asmbl_5646.p1, internal, 92112, 92308
-recovered pasa_asmbl_5646.p1, internal, 92569, 92706
Valid prediction for GlimmerHMM_glimmerT_27998-T1
Valid prediction for GeneMark_model.48466_t
Valid prediction for CodingQuarry_transcript_8103-T1
Valid prediction for GlimmerHMM_glimmerT_28022-T1
Valid prediction for snap_scaffold_11-snap.1793-T1
Valid prediction for CodingQuarry_transcript_8104-T1
Valid prediction for snap_scaffold_11-snap.1789-T1
Valid prediction for HiQ_model.g18682.t1
Valid prediction for GlimmerHMM_glimmerT_28015-T1
Valid prediction for GlimmerHMM_glimmerT_28024-T1
Valid prediction for Augustus_model.g18667.t1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for snap_scaffold_11-snap.1804-T1
Valid prediction for snap_scaffold_11-snap.1795-T1
Valid prediction for GeneMark_model.48456_t
Valid prediction for Augustus_model.g18664.t1
Valid prediction for GlimmerHMM_glimmerT_28005-T1
Valid prediction for Augustus_model.g18660.t1
Valid prediction for snap_scaffold_11-snap.1781-T1
Valid prediction for GlimmerHMM_glimmerT_27999-T1
Valid prediction for GeneMark_model.48431_t
Valid prediction for GeneMark_model.48454_t
Valid prediction for Augustus_model.g18658.t1
Valid prediction for snap_scaffold_11-snap.1787-T1
Valid prediction for Augustus_model.g18671.t1
Valid prediction for GeneMark_model.48418_t
Valid prediction for Augustus_model.g18678.t1
Valid prediction for CodingQuarry_transcript_8095-T1
Valid prediction for snap_scaffold_11-snap.1810-T1
Couldn't classify 59830, 60037
Sorry, prediction pasa_asmbl_6783.p1 fails validation.
(GGA)	 GA	59830-60037	GT	AGG
(GCG)	 AG	60492-60578	GT	AGG
(GCG)	 AG	60763-63272	GT	TTG
(GTG)	 AG	63384-63510	GT	AGG
(GGT)	 AG	66220-66437	GT	AGG
(GTC)	 AG	66575-66730	GT	GAG
-recovered pasa_asmbl_6783.p1, terminal, 66575, 66730
-recovered pasa_asmbl_6783.p1, internal, 60492, 60578
-recovered pasa_asmbl_6783.p1, internal, 60763, 63272
-recovered pasa_asmbl_6783.p1, internal, 63384, 63510
-recovered pasa_asmbl_6783.p1, internal, 66220, 66437
-recovered pasa_asmbl_6783.p1, internal, 66575, 66730
Valid prediction for snap_scaffold_11-snap.1790-T1
Valid prediction for snap_scaffold_11-snap.1797-T1
Valid prediction for pasa_asmbl_6782.p1
Valid prediction for GeneMark_model.48414_t
Valid prediction for GeneMark_model.48420_t
Valid prediction for GlimmerHMM_glimmerT_27997-T1
Valid prediction for CodingQuarry_transcript_8097-T1
Valid prediction for GeneMark_model.48428_t
Valid prediction for snap_scaffold_11-snap.1816-T1
Valid prediction for snap_scaffold_11-snap.1808-T1
Valid prediction for snap_scaffold_11-snap.1780-T1
Valid prediction for pasa_asmbl_6780.p1
Valid prediction for snap_scaffold_11-snap.1806-T1
Valid prediction for snap_scaffold_11-snap.1805-T1
Valid prediction for snap_scaffold_11-snap.1799-T1
Valid prediction for GeneMark_model.48433_t
Valid prediction for HiQ_model.g18657.t1
Valid prediction for GeneMark_model.48437_t
Valid prediction for snap_scaffold_11-snap.1784-T1
Valid prediction for snap_scaffold_11-snap.1794-T1
Valid prediction for GeneMark_model.48415_t
Valid prediction for GeneMark_model.48457_t
Valid prediction for snap_scaffold_11-snap.1791-T1
Valid prediction for GeneMark_model.48450_t
Valid prediction for Augustus_model.g18672.t1
Valid prediction for snap_scaffold_11-snap.1801-T1
Valid prediction for snap_scaffold_11-snap.1820-T1
Valid prediction for GlimmerHMM_glimmerT_28014-T1
Couldn't classify 217232, 217306
Sorry, prediction pasa_asmbl_6777.p1 fails validation.
(TTA)	 AG	217232-217306	GT	AGG
(AAT)	 AG	217471-217563	GT	GAG
(AAT)	 AG	218051-218134	GT	AGG
(ATG)	 AG	218483-218506	GT	AGG
(GCA)	 AG	218614-218703	GT	ATG
(GCA)	 AG	219748-219848	GT	AGG
(CAT)	 AG	220074-220443	GT	AGG
-recovered pasa_asmbl_6777.p1, initial, 218483, 218506
-recovered pasa_asmbl_6777.p1, terminal, 220074, 220443
-recovered pasa_asmbl_6777.p1, internal, 217232, 217306
-recovered pasa_asmbl_6777.p1, internal, 217471, 217563
-recovered pasa_asmbl_6777.p1, internal, 218051, 218134
-recovered pasa_asmbl_6777.p1, internal, 218483, 218506
-recovered pasa_asmbl_6777.p1, internal, 218614, 218703
-recovered pasa_asmbl_6777.p1, internal, 219748, 219848
-recovered pasa_asmbl_6777.p1, internal, 220074, 220443
Valid prediction for HiQ_model.g18670.t1
Valid prediction for GlimmerHMM_glimmerT_28002-T1
Valid prediction for CodingQuarry_transcript_8091-T1
Valid prediction for Augustus_model.g18659.t1
Valid prediction for GeneMark_model.48423_t
Valid prediction for GlimmerHMM_glimmerT_28006-T1
Valid prediction for snap_scaffold_11-snap.1814-T1
Valid prediction for GlimmerHMM_glimmerT_28003-T1
Valid prediction for GeneMark_model.48441_t
Valid prediction for GlimmerHMM_glimmerT_28021-T1
Valid prediction for pasa_asmbl_6776.p1
Valid prediction for GeneMark_model.48459_t
Valid prediction for GeneMark_model.48426_t
Valid prediction for GeneMark_model.48464_t
Valid prediction for GeneMark_model.48449_t
Valid prediction for GeneMark_model.48434_t
Valid prediction for GeneMark_model.48440_t
Valid prediction for Augustus_model.g18668.t1
Valid prediction for CodingQuarry_transcript_8092-T1
Couldn't classify 138741, 139460
Sorry, prediction pasa_asmbl_5647.p1 fails validation.
(CTT)	 GC	138741-139460	GT	AGG
Valid prediction for snap_scaffold_11-snap.1779-T1
Sorry, intron length (4) is less than minimum required (10)
Valid prediction for GeneMark_model.48445_t
Valid prediction for GlimmerHMM_glimmerT_28011-T1
Valid prediction for GlimmerHMM_glimmerT_28000-T1
Valid prediction for snap_scaffold_11-snap.1786-T1
Valid prediction for Augustus_model.g18663.t1
Valid prediction for Augustus_model.g18677.t1
Valid prediction for GeneMark_model.48422_t
Valid prediction for GeneMark_model.48447_t
Valid prediction for GlimmerHMM_glimmerT_28019-T1
Valid prediction for CodingQuarry_transcript_8096-T1
Valid prediction for GeneMark_model.48416_t
Valid prediction for GeneMark_model.48424_t
Valid prediction for Augustus_model.g18661.t1
Valid prediction for snap_scaffold_11-snap.1807-T1
Couldn't classify 59122, 59199
Couldn't classify 59527, 59610
Sorry, prediction pasa_asmbl_7348.p1 fails validation.
(AGG)	 AG	59122-59199	GT	AGG
(GTG)	 AG	59290-59427	GT	AGG
(TTT)	 AG	59527-59610	AA	GGA
-recovered pasa_asmbl_7348.p1, internal, 59122, 59199
-recovered pasa_asmbl_7348.p1, internal, 59290, 59427

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 20125, rend_intergenic: 14761  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 29474, rend_intergenic: 20467  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 35953, rend_intergenic: 30057  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 46103, rend_intergenic: 37049  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 51167, rend_intergenic: 46129  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 80196, rend_intergenic: 73594  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 93217, rend_intergenic: 88865  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 104930, rend_intergenic: 102322  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 107339, rend_intergenic: 106195  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 114077, rend_intergenic: 111310  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 184110, rend_intergenic: 181115  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 227069, rend_intergenic: 223236  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 245168
-exon list size: 747


building trellis

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44.7    
44.9    
45.0    
45.1    
45.3    
45.4    
45.5    
45.7    
45.8    
45.9    
46.1    
46.2    
46.3    
46.5    
46.6    
46.7    
46.9    
47.0    
47.1    
47.3    
47.4    
47.5    
47.7    
47.8    
47.9    
48.1    
48.2    
48.3    
48.5    
48.6    
48.7    
48.9    
49.0    
49.1    
49.3    
49.4    
49.5    
49.7    
49.8    
49.9    
50.1    
50.2    
50.3    
50.5    
50.6    
50.7    
50.9    
51.0    
51.1    
51.3    
51.4    
51.5    
51.7    
51.8    
51.9    
52.1    
52.2    
52.3    
52.5    
52.6    
52.7    
52.9    
53.0    
53.1    
53.3    
53.4    
53.5    
53.7    
53.8    
53.9    
54.1    
54.2    
54.3    
54.5    
54.6    
54.7    
54.9    
55.0    
55.1    
55.3    
55.4    
55.5    
55.7    
55.8    
55.9    
56.1    
56.2    
56.3    
56.5    
56.6    
56.7    
56.9    
57.0    
57.1    
57.3    
57.4    
57.5    
57.7    
57.8    
57.9    
58.1    
58.2    
58.3    
58.5    
58.6    
58.7    
58.9    
59.0    
59.1    
59.3    
59.4    
59.5    
59.7    
59.8    
59.9    
60.1    
60.2    
60.3    
60.5    
60.6    
60.7    
60.9    
61.0    
61.1    
61.3    
61.4    
61.5    
61.7    
61.8    
61.9    
62.1    
62.2    
62.3    
62.5    
62.6    
62.8    
62.9    
63.0    
63.2    
63.3    
63.4    
63.6    
63.7    
63.8    
64.0    
64.1    
64.2    
64.4    
64.5    
64.6    
64.8    
64.9    
65.0    
65.2    
65.3    
65.4    
65.6    
65.7    
65.8    
66.0    
66.1    
66.2    
66.4    
66.5    
66.6    
66.8    
66.9    
67.0    
67.2    
67.3    
67.4    
67.6    
67.7    
67.8    
68.0    
68.1    
68.2    
68.4    
68.5    
68.6    
68.8    
68.9    
69.0    
69.2    
69.3    
69.4    
69.6    
69.7    
69.8    
70.0    
70.1    
70.2    
70.4    
70.5    
70.6    
70.8    
70.9    
71.0    
71.2    
71.3    
71.4    
71.6    
71.7    
71.8    
72.0    
72.1    
72.2    
72.4    
72.5    
72.6    
72.8    
72.9    
73.0    
73.2    
73.3    
73.4    
73.6    
73.7    
73.8    
74.0    
74.1    
74.2    
74.4    
74.5    
74.6    
74.8    
74.9    
75.0    
75.2    
75.3    
75.4    
75.6    
75.7    
75.8    
76.0    
76.1    
76.2    
76.4    
76.5    
76.6    
76.8    
76.9    
77.0    
77.2    
77.3    
77.4    
77.6    
77.7    
77.8    
78.0    
78.1    
78.2    
78.4    
78.5    
78.6    
78.8    
78.9    
79.0    
79.2    
79.3    
79.4    
79.6    
79.7    
79.8    
80.0    
80.1    
80.2    
80.4    
80.5    
80.6    
80.8    
80.9    
81.0    
81.2    
81.3    
81.4    
81.6    
81.7    
81.8    
82.0    
82.1    
82.2    
82.4    
82.5    
82.6    
82.8    
82.9    
83.0    
83.2    
83.3    
83.4    
83.6    
83.7    
83.8    
84.0    
84.1    
84.2    
84.4    
84.5    
84.6    
84.8    
84.9    
85.0    
85.2    
85.3    
85.4    
85.6    
85.7    
85.8    
86.0    
86.1    
86.2    
86.4    
86.5    
86.6    
86.8    
86.9    
87.0    
87.2    
87.3    
87.4    
87.6    
87.7    
87.9    
88.0    
88.1    
88.3    
88.4    
88.5    
88.7    
88.8    
88.9    
89.1    
89.2    
89.3    
89.5    
89.6    
89.7    
89.9    
90.0    
90.1    
90.3    
90.4    
90.5    
90.7    
90.8    
90.9    
91.1    
91.2    
91.3    
91.5    
91.6    
91.7    
91.9    
92.0    
92.1    
92.3    
92.4    
92.5    
92.7    
92.8    
92.9    
93.1    
93.2    
93.3    
93.5    
93.6    
93.7    
93.9    
94.0    
94.1    
94.3    
94.4    
94.5    
94.7    
94.8    
94.9    
95.1    
95.2    
95.3    
95.5    
95.6    
95.7    
95.9    
96.0    
96.1    
96.3    
96.4    
96.5    
96.7    
96.8    
96.9    
97.1    
97.2    
97.3    
97.5    
97.6    
97.7    
97.9    
98.0    
98.1    
98.3    
98.4    
98.5    
98.7    
98.8    
98.9    
99.1    
99.2    
99.3    
99.5    
99.6    
99.7    
99.9    
-found 31 predictions from path traversal
Error with prediction: snap lend_intergenic: 20125, rend_intergenic: 14761  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 29474, rend_intergenic: 20467  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 35953, rend_intergenic: 30057  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 46103, rend_intergenic: 37049  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 51167, rend_intergenic: 46129  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 80196, rend_intergenic: 73594  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 93217, rend_intergenic: 88865  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 104930, rend_intergenic: 102322  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 107339, rend_intergenic: 106195  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 114077, rend_intergenic: 111310  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 184110, rend_intergenic: 181115  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 227069, rend_intergenic: 223236  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 27 predictions persist after filtering for low support