-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_11/scaffold_11_584128-859246

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for snap_scaffold_11-snap.174-T1
Valid prediction for snap_scaffold_11-snap.168-T1
Valid prediction for Augustus_model.g17994.t1
Valid prediction for snap_scaffold_11-snap.187-T1
Valid prediction for snap_scaffold_11-snap.188-T1
Valid prediction for GlimmerHMM_glimmerT_26916-T1
Valid prediction for snap_scaffold_11-snap.181-T1
Valid prediction for GeneMark_model.46517_t
Valid prediction for GlimmerHMM_glimmerT_26929-T1
Valid prediction for snap_scaffold_11-snap.164-T1
Valid prediction for snap_scaffold_11-snap.186-T1
Valid prediction for GeneMark_model.46479_t
Valid prediction for GeneMark_model.46457_t
Valid prediction for GlimmerHMM_glimmerT_26921-T1
Valid prediction for snap_scaffold_11-snap.160-T1
Valid prediction for GeneMark_model.46505_t
Valid prediction for Augustus_model.g18004.t1
Valid prediction for GeneMark_model.46519_t
Valid prediction for GlimmerHMM_glimmerT_26891-T1
Valid prediction for CodingQuarry_transcript_7920-T1
Valid prediction for GeneMark_model.46490_t
Valid prediction for GeneMark_model.46525_t
Valid prediction for GeneMark_model.46477_t
Valid prediction for GeneMark_model.46503_t
Valid prediction for GeneMark_model.46482_t
Valid prediction for Augustus_model.g17998.t1
Valid prediction for snap_scaffold_11-snap.151-T1
Valid prediction for snap_scaffold_11-snap.158-T1
Valid prediction for GeneMark_model.46465_t
Valid prediction for snap_scaffold_11-snap.135-T1
Valid prediction for HiQ_model.g18012.t1
Valid prediction for GeneMark_model.46472_t
Valid prediction for Augustus_model.g18000.t1
Valid prediction for GeneMark_model.46501_t
Valid prediction for snap_scaffold_11-snap.140-T1
Valid prediction for snap_scaffold_11-snap.171-T1
Valid prediction for GeneMark_model.46454_t
Valid prediction for GlimmerHMM_glimmerT_26918-T1
Valid prediction for GeneMark_model.46529_t
Valid prediction for snap_scaffold_11-snap.190-T1
Valid prediction for Augustus_model.g18001.t1
Valid prediction for GeneMark_model.46514_t
Valid prediction for GlimmerHMM_glimmerT_26923-T1
Valid prediction for snap_scaffold_11-snap.131-T1
Valid prediction for GlimmerHMM_glimmerT_26926-T1
Valid prediction for GlimmerHMM_glimmerT_26895-T1
Couldn't classify 267424, 267627
Sorry, prediction pasa_asmbl_5266.p1 fails validation.
(CGG)	 GA	267424-267627	GT	AGG
(GGT)	 AG	269514-269616	GT	CGG
(GGA)	 AG	269698-269760	GT	AGG
(GTC)	 AG	269845-269895	GT	GGG
(TGT)	 AG	270027-270093	GT	AAG
(TAT)	 AG	270399-270506	GT	AGG
(ATT)	 AG	270647-270728	GT	AGG
(GAG)	 AG	270959-271085	GT	TGG
(GCA)	 AG	271171-271325	GT	ATG
(GCT)	 AG	272761-272885	GT	GCG
(CAT)	 AG	273032-273129	GT	AGG
(CGA)	 AG	273261-273410	GT	CAG
(TCA)	 AG	273614-273666	AG	AAA
-recovered pasa_asmbl_5266.p1, terminal, 273614, 273666
-recovered pasa_asmbl_5266.p1, internal, 269514, 269616
-recovered pasa_asmbl_5266.p1, internal, 269698, 269760
-recovered pasa_asmbl_5266.p1, internal, 269845, 269895
-recovered pasa_asmbl_5266.p1, internal, 270027, 270093
-recovered pasa_asmbl_5266.p1, internal, 270399, 270506
-recovered pasa_asmbl_5266.p1, internal, 270647, 270728
-recovered pasa_asmbl_5266.p1, internal, 270959, 271085
-recovered pasa_asmbl_5266.p1, internal, 271171, 271325
-recovered pasa_asmbl_5266.p1, internal, 272761, 272885
-recovered pasa_asmbl_5266.p1, internal, 273032, 273129
-recovered pasa_asmbl_5266.p1, internal, 273261, 273410
Valid prediction for GlimmerHMM_glimmerT_26915-T1
Valid prediction for snap_scaffold_11-snap.184-T1
Valid prediction for GlimmerHMM_glimmerT_26908-T1
Valid prediction for GeneMark_model.46523_t
Valid prediction for HiQ_model.g18006.t1
Valid prediction for snap_scaffold_11-snap.169-T1
Valid prediction for GeneMark_model.46533_t
Couldn't classify 263184, 263348
Couldn't classify 264446, 265050
Sorry, prediction pasa_asmbl_5260.p1 fails validation.
(GAA)	 AG	263184-263348	GT	AGG
(GAG)	 AG	263497-263599	GT	CAG
(TCA)	 AG	264013-264165	GT	TGG
(GAT)	 AG	264446-265050	CA	GCC
-recovered pasa_asmbl_5260.p1, internal, 263184, 263348
-recovered pasa_asmbl_5260.p1, internal, 263497, 263599
-recovered pasa_asmbl_5260.p1, internal, 264013, 264165
Valid prediction for GeneMark_model.46486_t
Valid prediction for GeneMark_model.46491_t
Valid prediction for GeneMark_model.46531_t
Valid prediction for GeneMark_model.46494_t
Valid prediction for GeneMark_model.46484_t
Valid prediction for snap_scaffold_11-snap.179-T1
Valid prediction for Augustus_model.g18005.t1
Valid prediction for GeneMark_model.46463_t
Valid prediction for GlimmerHMM_glimmerT_26927-T1
Valid prediction for GeneMark_model.46522_t
Valid prediction for GlimmerHMM_glimmerT_26934-T1
Valid prediction for snap_scaffold_11-snap.147-T1
Valid prediction for snap_scaffold_11-snap.167-T1
Valid prediction for GeneMark_model.46475_t
Valid prediction for GlimmerHMM_glimmerT_26932-T1
Valid prediction for GeneMark_model.46461_t
Valid prediction for GeneMark_model.46469_t
Valid prediction for GeneMark_model.46507_t
Valid prediction for snap_scaffold_11-snap.154-T1
Valid prediction for snap_scaffold_11-snap.177-T1
Valid prediction for Augustus_model.g18011.t1
Valid prediction for CodingQuarry_transcript_7919-T1
Valid prediction for GeneMark_model.46499_t
Valid prediction for GeneMark_model.46467_t
Couldn't classify 203246, 203359
Sorry, prediction pasa_asmbl_5258.p1 fails validation.
(GCA)	 GC	203246-203359	GT	TGG
(GAG)	 AG	203892-203986	GT	TTG
(CGC)	 AG	204083-204212	GC	GAG
-recovered pasa_asmbl_5258.p1, terminal, 204083, 204212
-recovered pasa_asmbl_5258.p1, internal, 203892, 203986
-recovered pasa_asmbl_5258.p1, internal, 204083, 204212
Valid prediction for GeneMark_model.46496_t
Valid prediction for GeneMark_model.46506_t
Valid prediction for GeneMark_model.46527_t
Valid prediction for snap_scaffold_11-snap.180-T1
Valid prediction for GlimmerHMM_glimmerT_26894-T1
Valid prediction for snap_scaffold_11-snap.166-T1
Valid prediction for GeneMark_model.46520_t
Valid prediction for snap_scaffold_11-snap.175-T1
Valid prediction for GeneMark_model.46470_t
Valid prediction for GeneMark_model.46493_t
Valid prediction for GlimmerHMM_glimmerT_26902-T1
Valid prediction for GeneMark_model.46455_t
Valid prediction for Augustus_model.g18008.t1
Valid prediction for Augustus_model.g18009.t1
Valid prediction for snap_scaffold_11-snap.172-T1
Valid prediction for snap_scaffold_11-snap.155-T1
Sorry, intron length (8) is less than minimum required (10)
Valid prediction for snap_scaffold_11-snap.149-T1
Valid prediction for Augustus_model.g18003.t1
Valid prediction for snap_scaffold_11-snap.133-T1
Valid prediction for GlimmerHMM_glimmerT_26913-T1
Valid prediction for GlimmerHMM_glimmerT_26901-T1
Valid prediction for GeneMark_model.46534_t
Valid prediction for snap_scaffold_11-snap.142-T1
Valid prediction for snap_scaffold_11-snap.137-T1
Valid prediction for GlimmerHMM_glimmerT_26905-T1
Valid prediction for GeneMark_model.46510_t
Valid prediction for GlimmerHMM_glimmerT_26925-T1
Valid prediction for GlimmerHMM_glimmerT_26933-T1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for snap_scaffold_11-snap.146-T1
Valid prediction for snap_scaffold_11-snap.157-T1
Valid prediction for snap_scaffold_11-snap.143-T1
Valid prediction for GlimmerHMM_glimmerT_26924-T1
Valid prediction for GeneMark_model.46480_t
Valid prediction for GeneMark_model.46488_t
Valid prediction for GeneMark_model.46526_t
Valid prediction for Augustus_model.g18010.t1
Valid prediction for HiQ_model.g17992.t1
Valid prediction for GeneMark_model.46471_t
Valid prediction for snap_scaffold_11-snap.134-T1
Valid prediction for GlimmerHMM_glimmerT_26893-T1
Valid prediction for GeneMark_model.46489_t
Valid prediction for GeneMark_model.46500_t
Valid prediction for snap_scaffold_11-snap.139-T1
Valid prediction for Augustus_model.g18002.t1
Valid prediction for GlimmerHMM_glimmerT_26928-T1
Valid prediction for snap_scaffold_11-snap.152-T1
Valid prediction for GlimmerHMM_glimmerT_26900-T1
Valid prediction for GeneMark_model.46511_t
Valid prediction for Augustus_model.g17995.t1
Valid prediction for snap_scaffold_11-snap.150-T1
Valid prediction for GeneMark_model.46483_t
Valid prediction for GeneMark_model.46468_t
Valid prediction for Augustus_model.g17997.t1
Valid prediction for GeneMark_model.46460_t
Valid prediction for GeneMark_model.46528_t
Valid prediction for snap_scaffold_11-snap.153-T1
Valid prediction for GeneMark_model.46512_t
Valid prediction for GeneMark_model.46466_t
Valid prediction for Augustus_model.g17993.t1
Valid prediction for GeneMark_model.46478_t
Valid prediction for GeneMark_model.46473_t
Valid prediction for snap_scaffold_11-snap.182-T1
Valid prediction for GeneMark_model.46516_t
Valid prediction for snap_scaffold_11-snap.145-T1
Valid prediction for snap_scaffold_11-snap.161-T1
Valid prediction for GlimmerHMM_glimmerT_26907-T1
Valid prediction for GlimmerHMM_glimmerT_26917-T1
Valid prediction for GlimmerHMM_glimmerT_26922-T1
Valid prediction for GlimmerHMM_glimmerT_26896-T1
Valid prediction for snap_scaffold_11-snap.156-T1
Couldn't classify 265233, 265359
Sorry, prediction pasa_asmbl_6371.p1 fails validation.
(GAA)	 CA	265233-265359	GT	AGG
(ATG)	 AG	266017-266195	GT	AGG
(ACG)	 AG	266892-267074	CC	AAC
add_exon() Sorry, pasa_asmbl_6371.p1 266017-266195-initial-1 is invalid.
-recovered pasa_asmbl_6371.p1, initial, 266017, 266195
-recovered pasa_asmbl_6371.p1, terminal, 266892, 267074
-recovered pasa_asmbl_6371.p1, internal, 266017, 266195
Valid prediction for snap_scaffold_11-snap.132-T1
Valid prediction for GeneMark_model.46498_t
Valid prediction for GeneMark_model.46508_t
Valid prediction for GeneMark_model.46481_t
Valid prediction for GeneMark_model.46521_t
Valid prediction for GeneMark_model.46462_t
Valid prediction for GeneMark_model.46497_t
Valid prediction for GlimmerHMM_glimmerT_26906-T1
Valid prediction for HiQ_model.g18007.t1
Valid prediction for GlimmerHMM_glimmerT_26899-T1
Valid prediction for GlimmerHMM_glimmerT_26911-T1
Valid prediction for GlimmerHMM_glimmerT_26910-T1
Valid prediction for snap_scaffold_11-snap.162-T1
Valid prediction for GlimmerHMM_glimmerT_26903-T1
Valid prediction for GeneMark_model.46495_t
Valid prediction for snap_scaffold_11-snap.176-T1
Valid prediction for snap_scaffold_11-snap.138-T1
Valid prediction for GlimmerHMM_glimmerT_26890-T1
Valid prediction for GlimmerHMM_glimmerT_26892-T1
Valid prediction for GeneMark_model.46532_t
Valid prediction for snap_scaffold_11-snap.189-T1
Valid prediction for snap_scaffold_11-snap.178-T1
Valid prediction for GeneMark_model.46458_t
Valid prediction for snap_scaffold_11-snap.141-T1
Valid prediction for GlimmerHMM_glimmerT_26919-T1
Valid prediction for GeneMark_model.46459_t
Valid prediction for GlimmerHMM_glimmerT_26914-T1
Valid prediction for GeneMark_model.46464_t
Valid prediction for snap_scaffold_11-snap.165-T1
Valid prediction for snap_scaffold_11-snap.159-T1
Valid prediction for GeneMark_model.46509_t
Valid prediction for GeneMark_model.46456_t
Valid prediction for snap_scaffold_11-snap.136-T1
Valid prediction for GlimmerHMM_glimmerT_26909-T1
Valid prediction for snap_scaffold_11-snap.173-T1
Valid prediction for GeneMark_model.46487_t
Valid prediction for GeneMark_model.46530_t
Valid prediction for GlimmerHMM_glimmerT_26897-T1
Valid prediction for GlimmerHMM_glimmerT_26912-T1
Valid prediction for snap_scaffold_11-snap.183-T1
Valid prediction for snap_scaffold_11-snap.170-T1
Valid prediction for GlimmerHMM_glimmerT_26904-T1
Valid prediction for snap_scaffold_11-snap.148-T1
Valid prediction for snap_scaffold_11-snap.185-T1
Valid prediction for Augustus_model.g17999.t1
Valid prediction for GlimmerHMM_glimmerT_26898-T1
Valid prediction for GeneMark_model.46474_t
Valid prediction for Augustus_model.g17996.t1
Valid prediction for GeneMark_model.46524_t
Valid prediction for GlimmerHMM_glimmerT_26930-T1
Valid prediction for GeneMark_model.46476_t
Valid prediction for snap_scaffold_11-snap.163-T1
Valid prediction for GlimmerHMM_glimmerT_26931-T1
Valid prediction for snap_scaffold_11-snap.144-T1
Valid prediction for GeneMark_model.46502_t
Valid prediction for GeneMark_model.46485_t
Valid prediction for GlimmerHMM_glimmerT_26920-T1
Valid prediction for GeneMark_model.46504_t

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: GlimmerHMM lend_intergenic: 11314, rend_intergenic: 11311  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 13890, rend_intergenic: 6639  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 21321, rend_intergenic: 14130  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 27365, rend_intergenic: 21923  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 29196, rend_intergenic: 27384  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 35634, rend_intergenic: 30247  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 43716, rend_intergenic: 36308  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 46589, rend_intergenic: 43733  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 68671, rend_intergenic: 57420  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 73342, rend_intergenic: 71664  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 93201, rend_intergenic: 84346  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 98491, rend_intergenic: 93231  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 100812, rend_intergenic: 99093  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 106805, rend_intergenic: 101292  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 120120, rend_intergenic: 110092  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 125907, rend_intergenic: 120213  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 130811, rend_intergenic: 129169  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 131547, rend_intergenic: 131261  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 139727, rend_intergenic: 132442  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 158905, rend_intergenic: 144265  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 171321, rend_intergenic: 163305  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 200032, rend_intergenic: 191347  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 201869, rend_intergenic: 200245  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 207955, rend_intergenic: 204038  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 219446, rend_intergenic: 209951  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 227148, rend_intergenic: 222197  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 236345, rend_intergenic: 227449  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 246367, rend_intergenic: 241546  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 266479, rend_intergenic: 257915  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 275119
-exon list size: 1218


building trellis

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29.8    
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31.0    
31.1    
31.1    
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31.3    
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31.5    
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31.6    
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31.9    
32.0    
32.0    
32.1    
32.2    
32.3    
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32.5    
32.5    
32.6    
32.7    
32.8    
32.9    
33.0    
33.0    
33.1    
33.2    
33.3    
33.4    
33.4    
33.5    
33.6    
33.7    
33.8    
33.9    
33.9    
34.0    
34.1    
34.2    
34.3    
34.3    
34.4    
34.5    
34.6    
34.7    
34.8    
34.8    
34.9    
35.0    
35.1    
35.2    
35.2    
35.3    
35.4    
35.5    
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35.7    
35.7    
35.8    
35.9    
36.0    
36.1    
36.1    
36.2    
36.3    
36.4    
36.5    
36.6    
36.6    
36.7    
36.8    
36.9    
37.0    
37.0    
37.1    
37.2    
37.3    
37.4    
37.5    
37.5    
37.6    
37.7    
37.8    
37.9    
38.0    
38.0    
38.1    
38.2    
38.3    
38.4    
38.4    
38.5    
38.6    
38.7    
38.8    
38.9    
38.9    
39.0    
39.1    
39.2    
39.3    
39.3    
39.4    
39.5    
39.6    
39.7    
39.8    
39.8    
39.9    
40.0    
40.1    
40.2    
40.2    
40.3    
40.4    
40.5    
40.6    
40.7    
40.7    
40.8    
40.9    
41.0    
41.1    
41.1    
41.2    
41.3    
41.4    
41.5    
41.6    
41.6    
41.7    
41.8    
41.9    
42.0    
42.0    
42.1    
42.2    
42.3    
42.4    
42.5    
42.5    
42.6    
42.7    
42.8    
42.9    
43.0    
43.0    
43.1    
43.2    
43.3    
43.4    
43.4    
43.5    
43.6    
43.7    
43.8    
43.9    
43.9    
44.0    
44.1    
44.2    
44.3    
44.3    
44.4    
44.5    
44.6    
44.7    
44.8    
44.8    
44.9    
45.0    
45.1    
45.2    
45.2    
45.3    
45.4    
45.5    
45.6    
45.7    
45.7    
45.8    
45.9    
46.0    
46.1    
46.1    
46.2    
46.3    
46.4    
46.5    
46.6    
46.6    
46.7    
46.8    
46.9    
47.0    
47.0    
47.1    
47.2    
47.3    
47.4    
47.5    
47.5    
47.6    
47.7    
47.8    
47.9    
48.0    
48.0    
48.1    
48.2    
48.3    
48.4    
48.4    
48.5    
48.6    
48.7    
48.8    
48.9    
48.9    
49.0    
49.1    
49.2    
49.3    
49.3    
49.4    
49.5    
49.6    
49.7    
49.8    
49.8    
49.9    
50.0    
50.1    
50.2    
50.2    
50.3    
50.4    
50.5    
50.6    
50.7    
50.7    
50.8    
50.9    
51.0    
51.1    
51.1    
51.2    
51.3    
51.4    
51.5    
51.6    
51.6    
51.7    
51.8    
51.9    
52.0    
52.0    
52.1    
52.2    
52.3    
52.4    
52.5    
52.5    
52.6    
52.7    
52.8    
52.9    
53.0    
53.0    
53.1    
53.2    
53.3    
53.4    
53.4    
53.5    
53.6    
53.7    
53.8    
53.9    
53.9    
54.0    
54.1    
54.2    
54.3    
54.3    
54.4    
54.5    
54.6    
54.7    
54.8    
54.8    
54.9    
55.0    
55.1    
55.2    
55.2    
55.3    
55.4    
55.5    
55.6    
55.7    
55.7    
55.8    
55.9    
56.0    
56.1    
56.1    
56.2    
56.3    
56.4    
56.5    
56.6    
56.6    
56.7    
56.8    
56.9    
57.0    
57.0    
57.1    
57.2    
57.3    
57.4    
57.5    
57.5    
57.6    
57.7    
57.8    
57.9    
58.0    
58.0    
58.1    
58.2    
58.3    
58.4    
58.4    
58.5    
58.6    
58.7    
58.8    
58.9    
58.9    
59.0    
59.1    
59.2    
59.3    
59.3    
59.4    
59.5    
59.6    
59.7    
59.8    
59.8    
59.9    
60.0    
60.1    
60.2    
60.2    
60.3    
60.4    
60.5    
60.6    
60.7    
60.7    
60.8    
60.9    
61.0    
61.1    
61.1    
61.2    
61.3    
61.4    
61.5    
61.6    
61.6    
61.7    
61.8    
61.9    
62.0    
62.0    
62.1    
62.2    
62.3    
62.4    
62.5    
62.5    
62.6    
62.7    
62.8    
62.9    
63.0    
63.0    
63.1    
63.2    
63.3    
63.4    
63.4    
63.5    
63.6    
63.7    
63.8    
63.9    
63.9    
64.0    
64.1    
64.2    
64.3    
64.3    
64.4    
64.5    
64.6    
64.7    
64.8    
64.8    
64.9    
65.0    
65.1    
65.2    
65.2    
65.3    
65.4    
65.5    
65.6    
65.7    
65.7    
65.8    
65.9    
66.0    
66.1    
66.1    
66.2    
66.3    
66.4    
66.5    
66.6    
66.6    
66.7    
66.8    
66.9    
67.0    
67.0    
67.1    
67.2    
67.3    
67.4    
67.5    
67.5    
67.6    
67.7    
67.8    
67.9    
68.0    
68.0    
68.1    
68.2    
68.3    
68.4    
68.4    
68.5    
68.6    
68.7    
68.8    
68.9    
68.9    
69.0    
69.1    
69.2    
69.3    
69.3    
69.4    
69.5    
69.6    
69.7    
69.8    
69.8    
69.9    
70.0    
70.1    
70.2    
70.2    
70.3    
70.4    
70.5    
70.6    
70.7    
70.7    
70.8    
70.9    
71.0    
71.1    
71.1    
71.2    
71.3    
71.4    
71.5    
71.6    
71.6    
71.7    
71.8    
71.9    
72.0    
72.0    
72.1    
72.2    
72.3    
72.4    
72.5    
72.5    
72.6    
72.7    
72.8    
72.9    
73.0    
73.0    
73.1    
73.2    
73.3    
73.4    
73.4    
73.5    
73.6    
73.7    
73.8    
73.9    
73.9    
74.0    
74.1    
74.2    
74.3    
74.3    
74.4    
74.5    
74.6    
74.7    
74.8    
74.8    
74.9    
75.0    
75.1    
75.2    
75.2    
75.3    
75.4    
75.5    
75.6    
75.7    
75.7    
75.8    
75.9    
76.0    
76.1    
76.1    
76.2    
76.3    
76.4    
76.5    
76.6    
76.6    
76.7    
76.8    
76.9    
77.0    
77.0    
77.1    
77.2    
77.3    
77.4    
77.5    
77.5    
77.6    
77.7    
77.8    
77.9    
78.0    
78.0    
78.1    
78.2    
78.3    
78.4    
78.4    
78.5    
78.6    
78.7    
78.8    
78.9    
78.9    
79.0    
79.1    
79.2    
79.3    
79.3    
79.4    
79.5    
79.6    
79.7    
79.8    
79.8    
79.9    
80.0    
80.1    
80.2    
80.2    
80.3    
80.4    
80.5    
80.6    
80.7    
80.7    
80.8    
80.9    
81.0    
81.1    
81.1    
81.2    
81.3    
81.4    
81.5    
81.6    
81.6    
81.7    
81.8    
81.9    
82.0    
82.0    
82.1    
82.2    
82.3    
82.4    
82.5    
82.5    
82.6    
82.7    
82.8    
82.9    
83.0    
83.0    
83.1    
83.2    
83.3    
83.4    
83.4    
83.5    
83.6    
83.7    
83.8    
83.9    
83.9    
84.0    
84.1    
84.2    
84.3    
84.3    
84.4    
84.5    
84.6    
84.7    
84.8    
84.8    
84.9    
85.0    
85.1    
85.2    
85.2    
85.3    
85.4    
85.5    
85.6    
85.7    
85.7    
85.8    
85.9    
86.0    
86.1    
86.1    
86.2    
86.3    
86.4    
86.5    
86.6    
86.6    
86.7    
86.8    
86.9    
87.0    
87.0    
87.1    
87.2    
87.3    
87.4    
87.5    
87.5    
87.6    
87.7    
87.8    
87.9    
88.0    
88.0    
88.1    
88.2    
88.3    
88.4    
88.4    
88.5    
88.6    
88.7    
88.8    
88.9    
88.9    
89.0    
89.1    
89.2    
89.3    
89.3    
89.4    
89.5    
89.6    
89.7    
89.8    
89.8    
89.9    
90.0    
90.1    
90.2    
90.2    
90.3    
90.4    
90.5    
90.6    
90.7    
90.7    
90.8    
90.9    
91.0    
91.1    
91.1    
91.2    
91.3    
91.4    
91.5    
91.6    
91.6    
91.7    
91.8    
91.9    
92.0    
92.0    
92.1    
92.2    
92.3    
92.4    
92.5    
92.5    
92.6    
92.7    
92.8    
92.9    
93.0    
93.0    
93.1    
93.2    
93.3    
93.4    
93.4    
93.5    
93.6    
93.7    
93.8    
93.9    
93.9    
94.0    
94.1    
94.2    
94.3    
94.3    
94.4    
94.5    
94.6    
94.7    
94.8    
94.8    
94.9    
95.0    
95.1    
95.2    
95.2    
95.3    
95.4    
95.5    
95.6    
95.7    
95.7    
95.8    
95.9    
96.0    
96.1    
96.1    
96.2    
96.3    
96.4    
96.5    
96.6    
96.6    
96.7    
96.8    
96.9    
97.0    
97.0    
97.1    
97.2    
97.3    
97.4    
97.5    
97.5    
97.6    
97.7    
97.8    
97.9    
98.0    
98.0    
98.1    
98.2    
98.3    
98.4    
98.4    
98.5    
98.6    
98.7    
98.8    
98.9    
98.9    
99.0    
99.1    
99.2    
99.3    
99.3    
99.4    
99.5    
99.6    
99.7    
99.8    
99.8    
99.9    
-found 62 predictions from path traversal
Error with prediction: GlimmerHMM lend_intergenic: 11314, rend_intergenic: 11311  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 13890, rend_intergenic: 6639  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 21321, rend_intergenic: 14130  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 27365, rend_intergenic: 21923  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 29196, rend_intergenic: 27384  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 35634, rend_intergenic: 30247  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 43716, rend_intergenic: 36308  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 46589, rend_intergenic: 43733  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 68671, rend_intergenic: 57420  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 73342, rend_intergenic: 71664  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 93201, rend_intergenic: 84346  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 98491, rend_intergenic: 93231  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 100812, rend_intergenic: 99093  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 106805, rend_intergenic: 101292  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 120120, rend_intergenic: 110092  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 125907, rend_intergenic: 120213  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 130811, rend_intergenic: 129169  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 131547, rend_intergenic: 131261  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 139727, rend_intergenic: 132442  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 158905, rend_intergenic: 144265  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 171321, rend_intergenic: 163305  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 200032, rend_intergenic: 191347  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 201869, rend_intergenic: 200245  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 207955, rend_intergenic: 204038  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 219446, rend_intergenic: 209951  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 227148, rend_intergenic: 222197  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 236345, rend_intergenic: 227449  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 246367, rend_intergenic: 241546  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 266479, rend_intergenic: 257915  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 31 predictions persist after filtering for low support