-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_11/scaffold_11_5334999-5547650

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for snap_scaffold_11-snap.1307-T1
Valid prediction for GeneMark_model.47849_t
Valid prediction for Augustus_model.g18465.t1
Valid prediction for GeneMark_model.47890_t
Valid prediction for snap_scaffold_11-snap.1333-T1
Valid prediction for snap_scaffold_11-snap.1297-T1
Valid prediction for GeneMark_model.47908_t
Valid prediction for GeneMark_model.47897_t
Valid prediction for GlimmerHMM_glimmerT_27686-T1
Valid prediction for pasa_asmbl_5529.p1
Valid prediction for GeneMark_model.47861_t
Valid prediction for GlimmerHMM_glimmerT_27699-T1
Valid prediction for GeneMark_model.47885_t
Valid prediction for GeneMark_model.47888_t
Valid prediction for GeneMark_model.47899_t
Valid prediction for GeneMark_model.47869_t
Valid prediction for snap_scaffold_11-snap.1318-T1
Valid prediction for GlimmerHMM_glimmerT_27698-T1
Valid prediction for GlimmerHMM_glimmerT_27700-T1
Valid prediction for snap_scaffold_11-snap.1322-T1
Couldn't classify 204506, 204583
Couldn't classify 206324, 206419
Sorry, prediction pasa_asmbl_6302.p1 fails validation.
(TGT)	 AG	204506-204583	GT	AGG
(TTC)	 AG	204822-204983	GT	AGG
(CCG)	 AG	206324-206419	GC	CAG
-recovered pasa_asmbl_6302.p1, internal, 204506, 204583
-recovered pasa_asmbl_6302.p1, internal, 204822, 204983
-recovered pasa_asmbl_6302.p1, internal, 206324, 206419
Valid prediction for GeneMark_model.47910_t
Valid prediction for GeneMark_model.47892_t
Valid prediction for GeneMark_model.47912_t
Valid prediction for GeneMark_model.47900_t
Valid prediction for HiQ_model.g18461.t1
Valid prediction for GeneMark_model.47873_t
Valid prediction for snap_scaffold_11-snap.1320-T1
Valid prediction for snap_scaffold_11-snap.1301-T1
Valid prediction for GlimmerHMM_glimmerT_27681-T1
Valid prediction for Augustus_model.g18452.t1
Valid prediction for snap_scaffold_11-snap.1296-T1
Valid prediction for snap_scaffold_11-snap.1312-T1
Valid prediction for snap_scaffold_11-snap.1305-T1
Valid prediction for GlimmerHMM_glimmerT_27685-T1
Valid prediction for GlimmerHMM_glimmerT_27683-T1
Valid prediction for GlimmerHMM_glimmerT_27692-T1
Valid prediction for GeneMark_model.47907_t
Valid prediction for snap_scaffold_11-snap.1336-T1
Valid prediction for snap_scaffold_11-snap.1304-T1
Valid prediction for GeneMark_model.47854_t
Valid prediction for Augustus_model.g18450.t1
Valid prediction for GeneMark_model.47887_t
Valid prediction for GlimmerHMM_glimmerT_27670-T1
Valid prediction for GeneMark_model.47867_t
Valid prediction for GlimmerHMM_glimmerT_27668-T1
Valid prediction for snap_scaffold_11-snap.1315-T1
Couldn't classify 196975, 197064
Sorry, prediction pasa_asmbl_5531.p1 fails validation.
(ATG)	 CC	193870-194090	GT	TGG
(CCA)	 AG	194273-194330	GT	AGG
(TTC)	 AG	194493-194579	GT	AGG
(AGA)	 AG	194698-194934	GT	AAG
(GAG)	 AG	195075-195154	GT	AGG
(GTT)	 AG	195404-195548	GT	AGG
(TGT)	 AG	195841-195999	GT	AGG
(CAC)	 AG	196154-196269	GT	GGG
(AGG)	 AG	196384-196507	GT	AGG
(ACC)	 AG	196786-196866	GT	ACG
(GAG)	 AG	196975-197064	GT	AGG
-recovered pasa_asmbl_5531.p1, initial, 193870, 194090
-recovered pasa_asmbl_5531.p1, internal, 194273, 194330
-recovered pasa_asmbl_5531.p1, internal, 194493, 194579
-recovered pasa_asmbl_5531.p1, internal, 194698, 194934
-recovered pasa_asmbl_5531.p1, internal, 195075, 195154
-recovered pasa_asmbl_5531.p1, internal, 195404, 195548
-recovered pasa_asmbl_5531.p1, internal, 195841, 195999
-recovered pasa_asmbl_5531.p1, internal, 196154, 196269
-recovered pasa_asmbl_5531.p1, internal, 196384, 196507
-recovered pasa_asmbl_5531.p1, internal, 196786, 196866
-recovered pasa_asmbl_5531.p1, internal, 196975, 197064
Valid prediction for GlimmerHMM_glimmerT_27687-T1
Valid prediction for GeneMark_model.47874_t
Valid prediction for GlimmerHMM_glimmerT_27702-T1
Valid prediction for snap_scaffold_11-snap.1330-T1
Valid prediction for GeneMark_model.47853_t
Valid prediction for GeneMark_model.47864_t
Valid prediction for Augustus_model.g18451.t1
Valid prediction for snap_scaffold_11-snap.1334-T1
Valid prediction for snap_scaffold_11-snap.1309-T1
Valid prediction for Augustus_model.g18453.t1
Valid prediction for Augustus_model.g18446.t1
Valid prediction for GeneMark_model.47857_t
Valid prediction for Augustus_model.g18462.t1
Valid prediction for GeneMark_model.47855_t
Valid prediction for GeneMark_model.47884_t
Valid prediction for GeneMark_model.47859_t
Valid prediction for GeneMark_model.47876_t
Valid prediction for GeneMark_model.47882_t
Valid prediction for snap_scaffold_11-snap.1323-T1
Valid prediction for GeneMark_model.47880_t
Valid prediction for GlimmerHMM_glimmerT_27676-T1
Valid prediction for GlimmerHMM_glimmerT_27703-T1
Valid prediction for CodingQuarry_transcript_8043-T1
Valid prediction for GeneMark_model.47894_t
Valid prediction for GlimmerHMM_glimmerT_27679-T1
Valid prediction for snap_scaffold_11-snap.1337-T1
Valid prediction for snap_scaffold_11-snap.1298-T1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for pasa_asmbl_6648.p1
Valid prediction for GeneMark_model.47906_t
Valid prediction for GeneMark_model.47896_t
Valid prediction for GeneMark_model.47903_t
Valid prediction for GeneMark_model.47865_t
Valid prediction for GeneMark_model.47878_t
Valid prediction for GlimmerHMM_glimmerT_27669-T1
Valid prediction for snap_scaffold_11-snap.1300-T1
Valid prediction for GlimmerHMM_glimmerT_27682-T1
Valid prediction for GeneMark_model.47909_t
Valid prediction for GeneMark_model.47863_t
Valid prediction for CodingQuarry_transcript_8042-T1
Valid prediction for snap_scaffold_11-snap.1326-T1
Valid prediction for GeneMark_model.47872_t
Valid prediction for GeneMark_model.47852_t
Valid prediction for GlimmerHMM_glimmerT_27694-T1
Valid prediction for GeneMark_model.47891_t
Valid prediction for GlimmerHMM_glimmerT_27675-T1
Valid prediction for GlimmerHMM_glimmerT_27697-T1
Valid prediction for snap_scaffold_11-snap.1335-T1
Valid prediction for snap_scaffold_11-snap.1319-T1
Valid prediction for GlimmerHMM_glimmerT_27677-T1
Valid prediction for pasa_asmbl_6632.p1
Valid prediction for GeneMark_model.47860_t
Valid prediction for GeneMark_model.47901_t
Valid prediction for snap_scaffold_11-snap.1331-T1
Valid prediction for Augustus_model.g18448.t1
Valid prediction for GeneMark_model.47856_t
Valid prediction for HiQ_model.g18460.t1
Valid prediction for GlimmerHMM_glimmerT_27671-T1
Valid prediction for GeneMark_model.47850_t
Valid prediction for GlimmerHMM_glimmerT_27672-T1
Valid prediction for snap_scaffold_11-snap.1311-T1
Valid prediction for GlimmerHMM_glimmerT_27691-T1
Valid prediction for snap_scaffold_11-snap.1302-T1
Valid prediction for snap_scaffold_11-snap.1299-T1
Valid prediction for Augustus_model.g18447.t1
Valid prediction for GlimmerHMM_glimmerT_27701-T1
Valid prediction for GeneMark_model.47883_t
Valid prediction for Augustus_model.g18445.t1
Valid prediction for GlimmerHMM_glimmerT_27690-T1
Valid prediction for GlimmerHMM_glimmerT_27689-T1
Valid prediction for snap_scaffold_11-snap.1317-T1
Valid prediction for snap_scaffold_11-snap.1327-T1
Valid prediction for Augustus_model.g18459.t1
Valid prediction for pasa_asmbl_6640.p1
Valid prediction for GlimmerHMM_glimmerT_27693-T1
Valid prediction for CodingQuarry_transcript_8039-T1
Valid prediction for GeneMark_model.47889_t
Valid prediction for GeneMark_model.47898_t
Couldn't classify 32167, 32327
Couldn't classify 34600, 34634
Sorry, prediction pasa_asmbl_6646.p1 fails validation.
(AGA)	 GC	32167-32327	GT	GGG
(TCG)	 AG	32692-32793	GT	AGG
(CCG)	 AG	32893-32980	GT	AGG
(GCC)	 AG	33121-33255	GT	AGG
(TTG)	 AG	33449-33521	GT	TGG
(TCC)	 AG	33659-33825	GT	AGG
(GAG)	 AG	33927-34022	GT	AGG
(GAG)	 AG	34121-34259	GT	AGG
(AGG)	 AG	34351-34497	GC	AGG
(ATC)	 AG	34600-34634	AC	CCA
add_exon() Sorry, pasa_asmbl_6646.p1 34121-34259-terminal-3 is invalid.
-recovered pasa_asmbl_6646.p1, terminal, 34121, 34259
-recovered pasa_asmbl_6646.p1, internal, 32692, 32793
-recovered pasa_asmbl_6646.p1, internal, 32893, 32980
-recovered pasa_asmbl_6646.p1, internal, 33121, 33255
-recovered pasa_asmbl_6646.p1, internal, 33449, 33521
-recovered pasa_asmbl_6646.p1, internal, 33659, 33825
-recovered pasa_asmbl_6646.p1, internal, 33927, 34022
-recovered pasa_asmbl_6646.p1, internal, 34121, 34259
-recovered pasa_asmbl_6646.p1, internal, 34351, 34497
Valid prediction for snap_scaffold_11-snap.1310-T1
Valid prediction for CodingQuarry_transcript_8041-T1
Valid prediction for Augustus_model.g18449.t1
Valid prediction for GeneMark_model.47868_t
Valid prediction for GeneMark_model.47871_t
Couldn't classify 30421, 30604
Sorry, prediction pasa_asmbl_6647.p1 fails validation.
(ATG)	 AG	29384-29496	GT	GAG
(TGA)	 AG	30421-30604	CG	CCC
-recovered pasa_asmbl_6647.p1, initial, 29384, 29496
-recovered pasa_asmbl_6647.p1, internal, 29384, 29496
Valid prediction for GlimmerHMM_glimmerT_27673-T1
Valid prediction for GeneMark_model.47905_t
Valid prediction for GeneMark_model.47895_t
Valid prediction for snap_scaffold_11-snap.1306-T1
Valid prediction for GlimmerHMM_glimmerT_27688-T1
Couldn't classify 34841, 35024
Couldn't classify 35211, 35377
Sorry, prediction pasa_asmbl_7287.p1 fails validation.
(TCA)	 TG	34841-35024	GT	AGG
(GTG)	 AG	35211-35377	TA	GGT
Couldn't classify 50156, 50173
Sorry, prediction pasa_asmbl_6636.p1 fails validation.
(CCC)	 CA	50156-50173	GT	TGG
(CAA)	 AG	50316-50366	GT	GAG
(CCT)	 AG	51095-51199	GT	AGG
(AGC)	 AG	51712-51822	GT	TTG
(ATC)	 AG	52344-52465	GT	GCG
(GGA)	 AG	52820-52943	GT	ACG
(CTG)	 AG	53203-53298	GT	AGG
(GAT)	 AG	53488-53593	GT	AAG
(ATG)	 AG	54723-54798	GT	AAG
(ATT)	 AG	54890-54929	GT	GGG
(AAA)	 AG	55190-55276	GT	AGG
(GAT)	 AG	55721-55880	GT	AGG
(AGC)	 AG	55999-56084	GT	AGG
(GGT)	 AG	56329-56382	GT	AAG
add_exon() Sorry, pasa_asmbl_6636.p1 54723-54798-initial-1 is invalid.
-recovered pasa_asmbl_6636.p1, initial, 54723, 54798
-recovered pasa_asmbl_6636.p1, terminal, 56329, 56382
-recovered pasa_asmbl_6636.p1, internal, 50316, 50366
-recovered pasa_asmbl_6636.p1, internal, 51095, 51199
-recovered pasa_asmbl_6636.p1, internal, 51712, 51822
-recovered pasa_asmbl_6636.p1, internal, 52344, 52465
-recovered pasa_asmbl_6636.p1, internal, 52820, 52943
-recovered pasa_asmbl_6636.p1, internal, 53203, 53298
-recovered pasa_asmbl_6636.p1, internal, 53488, 53593
-recovered pasa_asmbl_6636.p1, internal, 54723, 54798
-recovered pasa_asmbl_6636.p1, internal, 54890, 54929
-recovered pasa_asmbl_6636.p1, internal, 55190, 55276
-recovered pasa_asmbl_6636.p1, internal, 55721, 55880
-recovered pasa_asmbl_6636.p1, internal, 55999, 56084
-recovered pasa_asmbl_6636.p1, internal, 56329, 56382
Valid prediction for snap_scaffold_11-snap.1313-T1
Valid prediction for GlimmerHMM_glimmerT_27704-T1
Valid prediction for GlimmerHMM_glimmerT_27674-T1
Valid prediction for GlimmerHMM_glimmerT_27684-T1
Valid prediction for snap_scaffold_11-snap.1316-T1
Couldn't classify 37145, 37532
Sorry, prediction pasa_asmbl_6644.p1 fails validation.
(GGC)	 TG	37145-37532	GT	AGG
(ACA)	 AG	37835-38004	GT	AGG
(GTG)	 AG	38248-38402	GT	AGG
(GCT)	 AG	38617-38777	GT	GGG
(GAG)	 AG	39035-39115	GT	TGG
(ACG)	 AG	39256-39503	GT	AGG
(GCG)	 AG	39758-39972	GT	AGG
(TGT)	 AG	40109-40425	GT	AGG
(AGG)	 AG	40630-40805	GT	AGG
(GTA)	 AG	41848-41935	GT	AGG
(CGG)	 AG	42191-42363	CA	AAC
-recovered pasa_asmbl_6644.p1, terminal, 42191, 42363
-recovered pasa_asmbl_6644.p1, internal, 37835, 38004
-recovered pasa_asmbl_6644.p1, internal, 38248, 38402
-recovered pasa_asmbl_6644.p1, internal, 38617, 38777
-recovered pasa_asmbl_6644.p1, internal, 39035, 39115
-recovered pasa_asmbl_6644.p1, internal, 39256, 39503
-recovered pasa_asmbl_6644.p1, internal, 39758, 39972
-recovered pasa_asmbl_6644.p1, internal, 40109, 40425
-recovered pasa_asmbl_6644.p1, internal, 40630, 40805
-recovered pasa_asmbl_6644.p1, internal, 41848, 41935
Valid prediction for Augustus_model.g18464.t1
Valid prediction for snap_scaffold_11-snap.1308-T1
Valid prediction for GeneMark_model.47879_t
Valid prediction for snap_scaffold_11-snap.1328-T1
Valid prediction for snap_scaffold_11-snap.1324-T1
Valid prediction for GlimmerHMM_glimmerT_27695-T1
Valid prediction for GeneMark_model.47877_t
Valid prediction for GeneMark_model.47902_t
Valid prediction for snap_scaffold_11-snap.1321-T1
Valid prediction for GeneMark_model.47893_t
Valid prediction for GlimmerHMM_glimmerT_27680-T1
Valid prediction for snap_scaffold_11-snap.1303-T1
Valid prediction for HiQ_model.g18458.t1
Valid prediction for GeneMark_model.47866_t
Valid prediction for Augustus_model.g18463.t1
Valid prediction for GeneMark_model.47851_t
Valid prediction for GeneMark_model.47911_t
Valid prediction for HiQ_model.g18457.t1
Valid prediction for HiQ_model.g18455.t1
Valid prediction for Augustus_model.g18456.t1
Valid prediction for GlimmerHMM_glimmerT_27696-T1
Valid prediction for GeneMark_model.47904_t
Valid prediction for GlimmerHMM_glimmerT_27678-T1
Couldn't classify 57685, 57827
Sorry, prediction pasa_asmbl_6634.p1 fails validation.
(TTC)	 AC	57685-57827	GT	AGG
(TTC)	 AG	58091-58272	GT	AGG
(CAG)	 AG	58401-58502	GT	AAG
(GCA)	 AG	58636-58750	GT	GGG
(GTA)	 AG	58958-59086	GT	AGG
(ACA)	 AG	59236-59548	AG	AAA
-recovered pasa_asmbl_6634.p1, terminal, 59236, 59548
-recovered pasa_asmbl_6634.p1, internal, 58091, 58272
-recovered pasa_asmbl_6634.p1, internal, 58401, 58502
-recovered pasa_asmbl_6634.p1, internal, 58636, 58750
-recovered pasa_asmbl_6634.p1, internal, 58958, 59086
Valid prediction for GeneMark_model.47886_t
Valid prediction for GeneMark_model.47862_t
Valid prediction for GeneMark_model.47881_t
Valid prediction for snap_scaffold_11-snap.1332-T1
Valid prediction for GeneMark_model.47913_t
Valid prediction for snap_scaffold_11-snap.1314-T1
Valid prediction for snap_scaffold_11-snap.1325-T1
Valid prediction for GeneMark_model.47875_t
Valid prediction for snap_scaffold_11-snap.1329-T1
Valid prediction for GeneMark_model.47870_t
Valid prediction for GeneMark_model.47858_t
Valid prediction for Augustus_model.g18454.t1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 15598, rend_intergenic: 9412  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 26472, rend_intergenic: 19437  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 36430, rend_intergenic: 28459  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 48546, rend_intergenic: 39311  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 67158, rend_intergenic: 50413  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 93170, rend_intergenic: 78493  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 98836, rend_intergenic: 93361  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 111301, rend_intergenic: 100630  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 114492, rend_intergenic: 113908  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 115485, rend_intergenic: 115279  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 125819, rend_intergenic: 116801  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 130113, rend_intergenic: 128762  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 132505, rend_intergenic: 130941  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 176679, rend_intergenic: 171870  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 198342, rend_intergenic: 197824  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 200516, rend_intergenic: 198738  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 212652
-exon list size: 918


building trellis

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24.6    
24.7    
24.8    
24.9    
25.0    
25.1    
25.2    
25.3    
25.4    
25.5    
25.7    
25.8    
25.9    
26.0    
26.1    
26.2    
26.3    
26.4    
26.5    
26.6    
26.7    
26.8    
27.0    
27.1    
27.2    
27.3    
27.4    
27.5    
27.6    
27.7    
27.8    
27.9    
28.0    
28.2    
28.3    
28.4    
28.5    
28.6    
28.7    
28.8    
28.9    
29.0    
29.1    
29.2    
29.3    
29.5    
29.6    
29.7    
29.8    
29.9    
30.0    
30.1    
30.2    
30.3    
30.4    
30.5    
30.7    
30.8    
30.9    
31.0    
31.1    
31.2    
31.3    
31.4    
31.5    
31.6    
31.7    
31.8    
32.0    
32.1    
32.2    
32.3    
32.4    
32.5    
32.6    
32.7    
32.8    
32.9    
33.0    
33.2    
33.3    
33.4    
33.5    
33.6    
33.7    
33.8    
33.9    
34.0    
34.1    
34.2    
34.3    
34.5    
34.6    
34.7    
34.8    
34.9    
35.0    
35.1    
35.2    
35.3    
35.4    
35.5    
35.7    
35.8    
35.9    
36.0    
36.1    
36.2    
36.3    
36.4    
36.5    
36.6    
36.7    
36.8    
37.0    
37.1    
37.2    
37.3    
37.4    
37.5    
37.6    
37.7    
37.8    
37.9    
38.0    
38.2    
38.3    
38.4    
38.5    
38.6    
38.7    
38.8    
38.9    
39.0    
39.1    
39.2    
39.3    
39.5    
39.6    
39.7    
39.8    
39.9    
40.0    
40.1    
40.2    
40.3    
40.4    
40.5    
40.7    
40.8    
40.9    
41.0    
41.1    
41.2    
41.3    
41.4    
41.5    
41.6    
41.7    
41.8    
42.0    
42.1    
42.2    
42.3    
42.4    
42.5    
42.6    
42.7    
42.8    
42.9    
43.0    
43.2    
43.3    
43.4    
43.5    
43.6    
43.7    
43.8    
43.9    
44.0    
44.1    
44.2    
44.3    
44.5    
44.6    
44.7    
44.8    
44.9    
45.0    
45.1    
45.2    
45.3    
45.4    
45.5    
45.7    
45.8    
45.9    
46.0    
46.1    
46.2    
46.3    
46.4    
46.5    
46.6    
46.7    
46.8    
47.0    
47.1    
47.2    
47.3    
47.4    
47.5    
47.6    
47.7    
47.8    
47.9    
48.0    
48.2    
48.3    
48.4    
48.5    
48.6    
48.7    
48.8    
48.9    
49.0    
49.1    
49.2    
49.3    
49.5    
49.6    
49.7    
49.8    
49.9    
50.0    
50.1    
50.2    
50.3    
50.4    
50.5    
50.7    
50.8    
50.9    
51.0    
51.1    
51.2    
51.3    
51.4    
51.5    
51.6    
51.7    
51.8    
52.0    
52.1    
52.2    
52.3    
52.4    
52.5    
52.6    
52.7    
52.8    
52.9    
53.0    
53.2    
53.3    
53.4    
53.5    
53.6    
53.7    
53.8    
53.9    
54.0    
54.1    
54.2    
54.3    
54.5    
54.6    
54.7    
54.8    
54.9    
55.0    
55.1    
55.2    
55.3    
55.4    
55.5    
55.7    
55.8    
55.9    
56.0    
56.1    
56.2    
56.3    
56.4    
56.5    
56.6    
56.7    
56.8    
57.0    
57.1    
57.2    
57.3    
57.4    
57.5    
57.6    
57.7    
57.8    
57.9    
58.0    
58.2    
58.3    
58.4    
58.5    
58.6    
58.7    
58.8    
58.9    
59.0    
59.1    
59.2    
59.3    
59.5    
59.6    
59.7    
59.8    
59.9    
60.0    
60.1    
60.2    
60.3    
60.4    
60.5    
60.7    
60.8    
60.9    
61.0    
61.1    
61.2    
61.3    
61.4    
61.5    
61.6    
61.7    
61.8    
62.0    
62.1    
62.2    
62.3    
62.4    
62.5    
62.6    
62.7    
62.8    
62.9    
63.0    
63.2    
63.3    
63.4    
63.5    
63.6    
63.7    
63.8    
63.9    
64.0    
64.1    
64.2    
64.3    
64.5    
64.6    
64.7    
64.8    
64.9    
65.0    
65.1    
65.2    
65.3    
65.4    
65.5    
65.7    
65.8    
65.9    
66.0    
66.1    
66.2    
66.3    
66.4    
66.5    
66.6    
66.7    
66.8    
67.0    
67.1    
67.2    
67.3    
67.4    
67.5    
67.6    
67.7    
67.8    
67.9    
68.0    
68.2    
68.3    
68.4    
68.5    
68.6    
68.7    
68.8    
68.9    
69.0    
69.1    
69.2    
69.3    
69.5    
69.6    
69.7    
69.8    
69.9    
70.0    
70.1    
70.2    
70.3    
70.4    
70.5    
70.7    
70.8    
70.9    
71.0    
71.1    
71.2    
71.3    
71.4    
71.5    
71.6    
71.7    
71.8    
72.0    
72.1    
72.2    
72.3    
72.4    
72.5    
72.6    
72.7    
72.8    
72.9    
73.0    
73.2    
73.3    
73.4    
73.5    
73.6    
73.7    
73.8    
73.9    
74.0    
74.1    
74.2    
74.3    
74.5    
74.6    
74.7    
74.8    
74.9    
75.0    
75.1    
75.2    
75.3    
75.4    
75.5    
75.7    
75.8    
75.9    
76.0    
76.1    
76.2    
76.3    
76.4    
76.5    
76.6    
76.7    
76.8    
77.0    
77.1    
77.2    
77.3    
77.4    
77.5    
77.6    
77.7    
77.8    
77.9    
78.0    
78.2    
78.3    
78.4    
78.5    
78.6    
78.7    
78.8    
78.9    
79.0    
79.1    
79.2    
79.3    
79.5    
79.6    
79.7    
79.8    
79.9    
80.0    
80.1    
80.2    
80.3    
80.4    
80.5    
80.7    
80.8    
80.9    
81.0    
81.1    
81.2    
81.3    
81.4    
81.5    
81.6    
81.7    
81.8    
82.0    
82.1    
82.2    
82.3    
82.4    
82.5    
82.6    
82.7    
82.8    
82.9    
83.0    
83.2    
83.3    
83.4    
83.5    
83.6    
83.7    
83.8    
83.9    
84.0    
84.1    
84.2    
84.3    
84.5    
84.6    
84.7    
84.8    
84.9    
85.0    
85.1    
85.2    
85.3    
85.4    
85.5    
85.7    
85.8    
85.9    
86.0    
86.1    
86.2    
86.3    
86.4    
86.5    
86.6    
86.7    
86.8    
87.0    
87.1    
87.2    
87.3    
87.4    
87.5    
87.6    
87.7    
87.8    
87.9    
88.0    
88.2    
88.3    
88.4    
88.5    
88.6    
88.7    
88.8    
88.9    
89.0    
89.1    
89.2    
89.3    
89.5    
89.6    
89.7    
89.8    
89.9    
90.0    
90.1    
90.2    
90.3    
90.4    
90.5    
90.7    
90.8    
90.9    
91.0    
91.1    
91.2    
91.3    
91.4    
91.5    
91.6    
91.7    
91.8    
92.0    
92.1    
92.2    
92.3    
92.4    
92.5    
92.6    
92.7    
92.8    
92.9    
93.0    
93.2    
93.3    
93.4    
93.5    
93.6    
93.7    
93.8    
93.9    
94.0    
94.1    
94.2    
94.3    
94.5    
94.6    
94.7    
94.8    
94.9    
95.0    
95.1    
95.2    
95.3    
95.4    
95.5    
95.7    
95.8    
95.9    
96.0    
96.1    
96.2    
96.3    
96.4    
96.5    
96.6    
96.7    
96.8    
97.0    
97.1    
97.2    
97.3    
97.4    
97.5    
97.6    
97.7    
97.8    
97.9    
98.0    
98.2    
98.3    
98.4    
98.5    
98.6    
98.7    
98.8    
98.9    
99.0    
99.1    
99.2    
99.3    
99.5    
99.6    
99.7    
99.8    
99.9    
-found 53 predictions from path traversal
Error with prediction: snap lend_intergenic: 15598, rend_intergenic: 9412  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 26472, rend_intergenic: 19437  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 36430, rend_intergenic: 28459  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 48546, rend_intergenic: 39311  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 67158, rend_intergenic: 50413  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 93170, rend_intergenic: 78493  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 98836, rend_intergenic: 93361  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 111301, rend_intergenic: 100630  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 114492, rend_intergenic: 113908  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 115485, rend_intergenic: 115279  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 125819, rend_intergenic: 116801  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 130113, rend_intergenic: 128762  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 132505, rend_intergenic: 130941  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 176679, rend_intergenic: 171870  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 198342, rend_intergenic: 197824  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 200516, rend_intergenic: 198738  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 20 predictions persist after filtering for low support