-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_11/scaffold_11_4865541-5103082 -reading genomic sequence. ** Processing features (+) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: +) -loading gene prediction evidence. (strand: +)Valid prediction for GeneMark_model.47694_t Valid prediction for snap_scaffold_11-snap.1235-T1 Valid prediction for GeneMark_model.47761_t Valid prediction for snap_scaffold_11-snap.1231-T1 Valid prediction for GeneMark_model.47754_t Valid prediction for GeneMark_model.47715_t Valid prediction for snap_scaffold_11-snap.1188-T1 Valid prediction for HiQ_model.g18415.t1 Valid prediction for GeneMark_model.47752_t Valid prediction for Augustus_model.g18414.t1 Valid prediction for GeneMark_model.47767_t Valid prediction for GeneMark_model.47731_t Valid prediction for GlimmerHMM_glimmerT_27615-T1 Valid prediction for snap_scaffold_11-snap.1236-T1 Couldn't classify 133668, 133771 Sorry, prediction GeneMark_model.47742_t fails validation. (ATG) GA 132150-132265 GT TGG (GGG) AG 132643-132787 GT AAG (GCT) AG 133103-133177 GT AGG (AAA) AG 133285-133369 GT AGG (GTG) AG 133668-133771 GT AGG -recovered GeneMark_model.47742_t, initial, 132150, 132265 -recovered GeneMark_model.47742_t, terminal, 133285, 133369 -recovered GeneMark_model.47742_t, internal, 132643, 132787 -recovered GeneMark_model.47742_t, internal, 133103, 133177 -recovered GeneMark_model.47742_t, internal, 133285, 133369 -recovered GeneMark_model.47742_t, internal, 133668, 133771 Valid prediction for GeneMark_model.47703_t Valid prediction for snap_scaffold_11-snap.1195-T1 Valid prediction for GlimmerHMM_glimmerT_27608-T1 Valid prediction for GeneMark_model.47700_t Valid prediction for GeneMark_model.47686_t Valid prediction for Augustus_model.g18410.t1 Valid prediction for snap_scaffold_11-snap.1226-T1 Valid prediction for snap_scaffold_11-snap.1238-T1 Valid prediction for GlimmerHMM_glimmerT_27619-T1 Valid prediction for GeneMark_model.47730_t Valid prediction for GlimmerHMM_glimmerT_27621-T1 Valid prediction for GeneMark_model.47750_t Valid prediction for GeneMark_model.47771_t Valid prediction for GlimmerHMM_glimmerT_27617-T1 Valid prediction for GeneMark_model.47698_t Valid prediction for GeneMark_model.47702_t Valid prediction for GeneMark_model.47737_t Valid prediction for snap_scaffold_11-snap.1196-T1 Valid prediction for GeneMark_model.47734_t Valid prediction for snap_scaffold_11-snap.1202-T1 Valid prediction for snap_scaffold_11-snap.1227-T1 Valid prediction for GeneMark_model.47724_t Valid prediction for GeneMark_model.47722_t Valid prediction for snap_scaffold_11-snap.1191-T1 Valid prediction for GeneMark_model.47709_t Valid prediction for snap_scaffold_11-snap.1206-T1 Valid prediction for GeneMark_model.47738_t Valid prediction for GeneMark_model.47744_t Valid prediction for GeneMark_model.47690_t Valid prediction for GeneMark_model.47735_t Valid prediction for GeneMark_model.47707_t Valid prediction for snap_scaffold_11-snap.1221-T1 Valid prediction for snap_scaffold_11-snap.1233-T1 Valid prediction for GlimmerHMM_glimmerT_27610-T1 Valid prediction for GlimmerHMM_glimmerT_27603-T1 Valid prediction for Augustus_model.g18412.t1 Valid prediction for GeneMark_model.47718_t Valid prediction for snap_scaffold_11-snap.1210-T1 Valid prediction for GeneMark_model.47766_t Valid prediction for snap_scaffold_11-snap.1220-T1 Valid prediction for GeneMark_model.47758_t Valid prediction for GeneMark_model.47720_t Valid prediction for GlimmerHMM_glimmerT_27620-T1 Valid prediction for snap_scaffold_11-snap.1212-T1 Valid prediction for snap_scaffold_11-snap.1217-T1 Valid prediction for pasa_asmbl_5498.p1 Valid prediction for snap_scaffold_11-snap.1209-T1 Valid prediction for GeneMark_model.47717_t Valid prediction for GeneMark_model.47769_t Valid prediction for GeneMark_model.47743_t Valid prediction for GeneMark_model.47756_t Valid prediction for GeneMark_model.47746_t Valid prediction for GeneMark_model.47688_t Valid prediction for GeneMark_model.47774_t Valid prediction for snap_scaffold_11-snap.1203-T1 Valid prediction for GeneMark_model.47726_t Valid prediction for GlimmerHMM_glimmerT_27613-T1 Valid prediction for snap_scaffold_11-snap.1211-T1 Valid prediction for snap_scaffold_11-snap.1200-T1 Valid prediction for GlimmerHMM_glimmerT_27622-T1 Valid prediction for GeneMark_model.47763_t Valid prediction for snap_scaffold_11-snap.1186-T1 Valid prediction for GlimmerHMM_glimmerT_27604-T1 Valid prediction for snap_scaffold_11-snap.1205-T1 Valid prediction for snap_scaffold_11-snap.1228-T1 Valid prediction for CodingQuarry_transcript_8029-T1 Valid prediction for GlimmerHMM_glimmerT_27618-T1 Valid prediction for Augustus_model.g18411.t1 Valid prediction for snap_scaffold_11-snap.1240-T1 Valid prediction for GeneMark_model.47692_t Valid prediction for GeneMark_model.47696_t Valid prediction for snap_scaffold_11-snap.1192-T1 Valid prediction for GeneMark_model.47759_t Couldn't classify 115531, 115618 Sorry, prediction pasa_asmbl_5496.p1 fails validation. (AAG) GT 115531-115618 GT AGG (ACC) AG 116953-117165 GT AGG (ATG) AG 117331-117546 GT AGG (ACG) AG 117900-118121 GT AGG (ACG) AG 119530-119718 GT TGG (AGA) AG 120095-120208 GT AGG (GGG) AG 120345-120535 GT AGG (CCC) AG 120696-120878 CA GAC add_exon() Sorry, pasa_asmbl_5496.p1 117331-117546-initial-1 is invalid. -recovered pasa_asmbl_5496.p1, initial, 117331, 117546 add_exon() Sorry, pasa_asmbl_5496.p1 117900-118121-terminal-1 is invalid. -recovered pasa_asmbl_5496.p1, terminal, 117900, 118121 -recovered pasa_asmbl_5496.p1, terminal, 120696, 120878 -recovered pasa_asmbl_5496.p1, internal, 116953, 117165 -recovered pasa_asmbl_5496.p1, internal, 117331, 117546 -recovered pasa_asmbl_5496.p1, internal, 117900, 118121 -recovered pasa_asmbl_5496.p1, internal, 119530, 119718 -recovered pasa_asmbl_5496.p1, internal, 120095, 120208 -recovered pasa_asmbl_5496.p1, internal, 120345, 120535 Valid prediction for snap_scaffold_11-snap.1216-T1 Valid prediction for Augustus_model.g18408.t1 Valid prediction for GeneMark_model.47741_t Valid prediction for Augustus_model.g18407.t1 -loading the search evidence (protein and EST search results, strand: +) -scoring exons (strand: +) ** Processing features (-) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: -) -loading gene prediction evidence. (strand: -)Valid prediction for snap_scaffold_11-snap.1232-T1 Valid prediction for GeneMark_model.47760_t Valid prediction for GeneMark_model.47770_t Valid prediction for snap_scaffold_11-snap.1237-T1 Couldn't classify 8707, 8791 Couldn't classify 12461, 12580 Sorry, prediction pasa_asmbl_6626.p1 fails validation. (TGG) AG 8707-8791 GT TGG (TGA) AG 10036-10114 GT CTG (GCT) AG 10496-10553 GT AGG (GAG) AG 10826-10918 GT AGG (GCC) AG 11035-11129 GT AGG (GCC) AG 11273-11339 GT AGG (GAG) AG 11461-11733 GT AGG (AGG) AG 12053-12163 GT CGG (ATA) AG 12461-12580 AC CCA -recovered pasa_asmbl_6626.p1, internal, 8707, 8791 -recovered pasa_asmbl_6626.p1, internal, 10036, 10114 -recovered pasa_asmbl_6626.p1, internal, 10496, 10553 -recovered pasa_asmbl_6626.p1, internal, 10826, 10918 -recovered pasa_asmbl_6626.p1, internal, 11035, 11129 -recovered pasa_asmbl_6626.p1, internal, 11273, 11339 -recovered pasa_asmbl_6626.p1, internal, 11461, 11733 -recovered pasa_asmbl_6626.p1, internal, 12053, 12163 Valid prediction for CodingQuarry_transcript_8030-T1 Valid prediction for GeneMark_model.47721_t Valid prediction for GlimmerHMM_glimmerT_27605-T1 Valid prediction for GlimmerHMM_glimmerT_27626-T1 Valid prediction for snap_scaffold_11-snap.1239-T1 Valid prediction for Augustus_model.g18406.t1 Valid prediction for snap_scaffold_11-snap.1215-T1 Valid prediction for snap_scaffold_11-snap.1194-T1 Valid prediction for snap_scaffold_11-snap.1234-T1 Valid prediction for GlimmerHMM_glimmerT_27627-T1 Valid prediction for GlimmerHMM_glimmerT_27616-T1 Valid prediction for snap_scaffold_11-snap.1187-T1 Valid prediction for GeneMark_model.47713_t Valid prediction for GeneMark_model.47732_t Valid prediction for snap_scaffold_11-snap.1199-T1 Valid prediction for GeneMark_model.47764_t Valid prediction for GlimmerHMM_glimmerT_27628-T1 Valid prediction for snap_scaffold_11-snap.1224-T1 Valid prediction for GeneMark_model.47693_t Valid prediction for GeneMark_model.47747_t Valid prediction for GeneMark_model.47755_t Valid prediction for GeneMark_model.47729_t Valid prediction for GeneMark_model.47740_t Valid prediction for GlimmerHMM_glimmerT_27607-T1 Valid prediction for GeneMark_model.47753_t Valid prediction for GeneMark_model.47748_t Valid prediction for snap_scaffold_11-snap.1223-T1 Valid prediction for snap_scaffold_11-snap.1213-T1 Valid prediction for Augustus_model.g18416.t1 Valid prediction for GeneMark_model.47685_t Valid prediction for snap_scaffold_11-snap.1219-T1 Valid prediction for GeneMark_model.47762_t Valid prediction for GeneMark_model.47736_t Valid prediction for GeneMark_model.47708_t Valid prediction for GeneMark_model.47710_t Valid prediction for GeneMark_model.47773_t Valid prediction for Augustus_model.g18422.t1 Valid prediction for GeneMark_model.47749_t Valid prediction for GeneMark_model.47723_t Valid prediction for snap_scaffold_11-snap.1207-T1 Valid prediction for GeneMark_model.47733_t Valid prediction for HiQ_model.g18421.t1 Valid prediction for GeneMark_model.47704_t Couldn't classify 229903, 229923 Sorry, prediction pasa_asmbl_6619.p1 fails validation. (CGA) TG 229903-229923 GT TGG (GGT) AG 230275-230328 GT AGG (GAC) AG 230830-230926 GT AGG (TCA) AG 231132-231256 GT AGG (GAG) AG 231673-231858 GT AGG (GTC) AG 232110-232238 GT AGG (GAG) AG 232427-232523 GT AGG (GTA) AG 232607-232796 GT AGG (GTA) AG 233006-233157 GT TGG (GTC) AG 233381-233535 GT AGG (GCT) AG 233747-233881 CC AAC -recovered pasa_asmbl_6619.p1, terminal, 230830, 230926 -recovered pasa_asmbl_6619.p1, terminal, 233747, 233881 -recovered pasa_asmbl_6619.p1, internal, 230275, 230328 -recovered pasa_asmbl_6619.p1, internal, 230830, 230926 -recovered pasa_asmbl_6619.p1, internal, 231132, 231256 -recovered pasa_asmbl_6619.p1, internal, 231673, 231858 -recovered pasa_asmbl_6619.p1, internal, 232110, 232238 -recovered pasa_asmbl_6619.p1, internal, 232427, 232523 -recovered pasa_asmbl_6619.p1, internal, 232607, 232796 -recovered pasa_asmbl_6619.p1, internal, 233006, 233157 -recovered pasa_asmbl_6619.p1, internal, 233381, 233535 Valid prediction for GlimmerHMM_glimmerT_27606-T1 Valid prediction for GeneMark_model.47757_t Valid prediction for snap_scaffold_11-snap.1193-T1 Valid prediction for GeneMark_model.47706_t Couldn't classify 3884, 4074 Sorry, prediction pasa_asmbl_6627.p1 fails validation. (GGG) GG 3884-4074 GT AGG (GCT) AG 4373-4491 GT CGG (GGC) AG 4677-4839 GT AGG (GTC) AG 5025-5139 GT AGG (AAC) AG 5351-5588 GT CGG (GGG) AG 5825-6071 GT GGG (GGT) AG 6258-6434 GT AAG (GTA) AG 6524-6674 GT AGG (GTG) AG 6881-7210 AC AGA -recovered pasa_asmbl_6627.p1, terminal, 6881, 7210 -recovered pasa_asmbl_6627.p1, internal, 4373, 4491 -recovered pasa_asmbl_6627.p1, internal, 4677, 4839 -recovered pasa_asmbl_6627.p1, internal, 5025, 5139 -recovered pasa_asmbl_6627.p1, internal, 5351, 5588 -recovered pasa_asmbl_6627.p1, internal, 5825, 6071 -recovered pasa_asmbl_6627.p1, internal, 6258, 6434 -recovered pasa_asmbl_6627.p1, internal, 6524, 6674 Valid prediction for GeneMark_model.47765_t Valid prediction for GeneMark_model.47705_t Valid prediction for GlimmerHMM_glimmerT_27629-T1 Valid prediction for snap_scaffold_11-snap.1230-T1 Valid prediction for snap_scaffold_11-snap.1197-T1 Couldn't classify 71075, 71202 Couldn't classify 72094, 72226 Sorry, prediction pasa_asmbl_7357.p1 fails validation. (GGG) AG 71075-71202 GT ATG (AGA) AG 71601-71690 GT AAG (GAA) AG 72094-72226 GG ACG -recovered pasa_asmbl_7357.p1, internal, 71075, 71202 -recovered pasa_asmbl_7357.p1, internal, 71601, 71690 Couldn't classify 15905, 15947 Sorry, prediction pasa_asmbl_6625.p1 fails validation. (GTT) AG 15905-15947 GT CAG (GCC) AG 16087-16224 GT AGG (ATG) AG 17387-17479 GT AGG (CTG) AG 17637-17812 GT ATG (GGT) AG 18034-18092 GT AGG (GCC) AG 18192-18345 GT AGG (CTG) AG 18437-18558 GT AAG (CCC) AG 18852-18939 GT AGG (GAC) AG 19054-19127 GT GGG (TCT) AG 19218-19282 GT AGG (GTA) AG 20363-20466 GT GGG (TTG) AG 20760-20856 GT AGG (GGA) AG 21146-21279 TG GAT add_exon() Sorry, pasa_asmbl_6625.p1 17387-17479-initial-1 is invalid. -recovered pasa_asmbl_6625.p1, initial, 17387, 17479 -recovered pasa_asmbl_6625.p1, terminal, 21146, 21279 -recovered pasa_asmbl_6625.p1, internal, 15905, 15947 -recovered pasa_asmbl_6625.p1, internal, 16087, 16224 -recovered pasa_asmbl_6625.p1, internal, 17387, 17479 -recovered pasa_asmbl_6625.p1, internal, 17637, 17812 -recovered pasa_asmbl_6625.p1, internal, 18034, 18092 -recovered pasa_asmbl_6625.p1, internal, 18192, 18345 -recovered pasa_asmbl_6625.p1, internal, 18437, 18558 -recovered pasa_asmbl_6625.p1, internal, 18852, 18939 -recovered pasa_asmbl_6625.p1, internal, 19054, 19127 -recovered pasa_asmbl_6625.p1, internal, 19218, 19282 -recovered pasa_asmbl_6625.p1, internal, 20363, 20466 -recovered pasa_asmbl_6625.p1, internal, 20760, 20856 Valid prediction for snap_scaffold_11-snap.1204-T1 Valid prediction for snap_scaffold_11-snap.1190-T1 Valid prediction for GeneMark_model.47716_t Valid prediction for GlimmerHMM_glimmerT_27625-T1 Valid prediction for GeneMark_model.47745_t Valid prediction for GeneMark_model.47691_t Valid prediction for snap_scaffold_11-snap.1229-T1 Valid prediction for GlimmerHMM_glimmerT_27630-T1 Valid prediction for GeneMark_model.47714_t Valid prediction for Augustus_model.g18409.t1 Valid prediction for Augustus_model.g18417.t1 Valid prediction for HiQ_model.g18404.t1 Valid prediction for GeneMark_model.47712_t Valid prediction for GeneMark_model.47687_t Valid prediction for snap_scaffold_11-snap.1225-T1 Valid prediction for GeneMark_model.47719_t Valid prediction for snap_scaffold_11-snap.1201-T1 Valid prediction for GeneMark_model.47772_t Valid prediction for GeneMark_model.47697_t Valid prediction for GeneMark_model.47699_t Valid prediction for GeneMark_model.47695_t Valid prediction for GlimmerHMM_glimmerT_27623-T1 Valid prediction for Augustus_model.g18418.t1 Valid prediction for GeneMark_model.47711_t Valid prediction for snap_scaffold_11-snap.1198-T1 Valid prediction for snap_scaffold_11-snap.1189-T1 Valid prediction for GeneMark_model.47689_t Valid prediction for GlimmerHMM_glimmerT_27612-T1 Valid prediction for GlimmerHMM_glimmerT_27611-T1 Valid prediction for Augustus_model.g18413.t1 Valid prediction for GeneMark_model.47701_t Valid prediction for GeneMark_model.47768_t Valid prediction for Augustus_model.g18419.t1 Valid prediction for GlimmerHMM_glimmerT_27614-T1 Valid prediction for GeneMark_model.47728_t Valid prediction for Augustus_model.g18405.t1 Valid prediction for snap_scaffold_11-snap.1214-T1 Valid prediction for snap_scaffold_11-snap.1208-T1 Valid prediction for GlimmerHMM_glimmerT_27624-T1 Valid prediction for GeneMark_model.47725_t Valid prediction for HiQ_model.g18423.t1 Valid prediction for GeneMark_model.47751_t Couldn't classify 29973, 30218 Sorry, prediction pasa_asmbl_6624.p1 fails validation. (TAT) AT 29973-30218 GT AGG (GTC) AG 31140-31217 GT AGG (GCT) AG 31471-31617 GT TGG (GGT) AG 31740-31901 GT TGG (GCG) AG 32034-32111 GT TGG (GTC) AG 32314-32497 GT CGG (GGA) AG 32644-32715 GT AGG (GGA) AG 32840-32911 GT TGG (ATT) AG 33070-33237 GT ACG (ACA) AG 33452-33654 GT AGG (TCA) AG 33977-34087 GT AGG (CCA) AG 34220-34396 GG GAG -recovered pasa_asmbl_6624.p1, terminal, 34220, 34396 -recovered pasa_asmbl_6624.p1, internal, 31140, 31217 -recovered pasa_asmbl_6624.p1, internal, 31471, 31617 -recovered pasa_asmbl_6624.p1, internal, 31740, 31901 -recovered pasa_asmbl_6624.p1, internal, 32034, 32111 -recovered pasa_asmbl_6624.p1, internal, 32314, 32497 -recovered pasa_asmbl_6624.p1, internal, 32644, 32715 -recovered pasa_asmbl_6624.p1, internal, 32840, 32911 -recovered pasa_asmbl_6624.p1, internal, 33070, 33237 -recovered pasa_asmbl_6624.p1, internal, 33452, 33654 -recovered pasa_asmbl_6624.p1, internal, 33977, 34087 Valid prediction for GeneMark_model.47727_t Valid prediction for Augustus_model.g18420.t1 Valid prediction for GlimmerHMM_glimmerT_27609-T1 Valid prediction for GlimmerHMM_glimmerT_27602-T1 Valid prediction for GeneMark_model.47739_t Valid prediction for snap_scaffold_11-snap.1218-T1 Valid prediction for snap_scaffold_11-snap.1222-T1 -loading the search evidence (protein and EST search results, strand: -) -scoring exons (strand: -)Error with prediction: snap lend_intergenic: 6717, rend_intergenic: 3662 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 11101, rend_intergenic: 8527 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 19318, rend_intergenic: 11738 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 38036, rend_intergenic: 20108 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 47720, rend_intergenic: 39278 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 51713, rend_intergenic: 48662 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 61016, rend_intergenic: 59475 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 72196, rend_intergenic: 62364 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 94881, rend_intergenic: 78113 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 101720, rend_intergenic: 94975 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 106055, rend_intergenic: 101787 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 120878, rend_intergenic: 106876 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 126970, rend_intergenic: 123643 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 140072, rend_intergenic: 128461 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 152375, rend_intergenic: 144323 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 183820, rend_intergenic: 162521 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 190000, rend_intergenic: 184109 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 195110, rend_intergenic: 192199 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 200640, rend_intergenic: 196187 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 209374, rend_intergenic: 205224 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 227663, rend_intergenic: 217546 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 234797, rend_intergenic: 231902 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -building DP trellis -building trellis in range 1 - 237542 -exon list size: 1125 building trellis 0.1 0.2 0.3 0.4 0.4 0.5 0.6 0.7 0.8 0.9 1.0 1.1 1.2 1.2 1.3 1.4 1.5 1.6 1.7 1.8 1.9 2.0 2.0 2.1 2.2 2.3 2.4 2.5 2.6 2.7 2.8 2.8 2.9 3.0 3.1 3.2 3.3 3.4 3.5 3.5 3.6 3.7 3.8 3.9 4.0 4.1 4.2 4.3 4.3 4.4 4.5 4.6 4.7 4.8 4.9 5.0 5.1 5.1 5.2 5.3 5.4 5.5 5.6 5.7 5.8 5.9 5.9 6.0 6.1 6.2 6.3 6.4 6.5 6.6 6.7 6.7 6.8 6.9 7.0 7.1 7.2 7.3 7.4 7.5 7.5 7.6 7.7 7.8 7.9 8.0 8.1 8.2 8.3 8.3 8.4 8.5 8.6 8.7 8.8 8.9 9.0 9.1 9.1 9.2 9.3 9.4 9.5 9.6 9.7 9.8 9.8 9.9 10.0 10.1 10.2 10.3 10.4 10.5 10.6 10.6 10.7 10.8 10.9 11.0 11.1 11.2 11.3 11.4 11.4 11.5 11.6 11.7 11.8 11.9 12.0 12.1 12.2 12.2 12.3 12.4 12.5 12.6 12.7 12.8 12.9 13.0 13.0 13.1 13.2 13.3 13.4 13.5 13.6 13.7 13.8 13.8 13.9 14.0 14.1 14.2 14.3 14.4 14.5 14.6 14.6 14.7 14.8 14.9 15.0 15.1 15.2 15.3 15.4 15.4 15.5 15.6 15.7 15.8 15.9 16.0 16.1 16.1 16.2 16.3 16.4 16.5 16.6 16.7 16.8 16.9 16.9 17.0 17.1 17.2 17.3 17.4 17.5 17.6 17.7 17.7 17.8 17.9 18.0 18.1 18.2 18.3 18.4 18.5 18.5 18.6 18.7 18.8 18.9 19.0 19.1 19.2 19.3 19.3 19.4 19.5 19.6 19.7 19.8 19.9 20.0 20.1 20.1 20.2 20.3 20.4 20.5 20.6 20.7 20.8 20.9 20.9 21.0 21.1 21.2 21.3 21.4 21.5 21.6 21.7 21.7 21.8 21.9 22.0 22.1 22.2 22.3 22.4 22.4 22.5 22.6 22.7 22.8 22.9 23.0 23.1 23.2 23.2 23.3 23.4 23.5 23.6 23.7 23.8 23.9 24.0 24.0 24.1 24.2 24.3 24.4 24.5 24.6 24.7 24.8 24.8 24.9 25.0 25.1 25.2 25.3 25.4 25.5 25.6 25.6 25.7 25.8 25.9 26.0 26.1 26.2 26.3 26.4 26.4 26.5 26.6 26.7 26.8 26.9 27.0 27.1 27.2 27.2 27.3 27.4 27.5 27.6 27.7 27.8 27.9 28.0 28.0 28.1 28.2 28.3 28.4 28.5 28.6 28.7 28.7 28.8 28.9 29.0 29.1 29.2 29.3 29.4 29.5 29.5 29.6 29.7 29.8 29.9 30.0 30.1 30.2 30.3 30.3 30.4 30.5 30.6 30.7 30.8 30.9 31.0 31.1 31.1 31.2 31.3 31.4 31.5 31.6 31.7 31.8 31.9 31.9 32.0 32.1 32.2 32.3 32.4 32.5 32.6 32.7 32.7 32.8 32.9 33.0 33.1 33.2 33.3 33.4 33.5 33.5 33.6 33.7 33.8 33.9 34.0 34.1 34.2 34.3 34.3 34.4 34.5 34.6 34.7 34.8 34.9 35.0 35.0 35.1 35.2 35.3 35.4 35.5 35.6 35.7 35.8 35.8 35.9 36.0 36.1 36.2 36.3 36.4 36.5 36.6 36.6 36.7 36.8 36.9 37.0 37.1 37.2 37.3 37.4 37.4 37.5 37.6 37.7 37.8 37.9 38.0 38.1 38.2 38.2 38.3 38.4 38.5 38.6 38.7 38.8 38.9 39.0 39.0 39.1 39.2 39.3 39.4 39.5 39.6 39.7 39.8 39.8 39.9 40.0 40.1 40.2 40.3 40.4 40.5 40.6 40.6 40.7 40.8 40.9 41.0 41.1 41.2 41.3 41.3 41.4 41.5 41.6 41.7 41.8 41.9 42.0 42.1 42.1 42.2 42.3 42.4 42.5 42.6 42.7 42.8 42.9 42.9 43.0 43.1 43.2 43.3 43.4 43.5 43.6 43.7 43.7 43.8 43.9 44.0 44.1 44.2 44.3 44.4 44.5 44.5 44.6 44.7 44.8 44.9 45.0 45.1 45.2 45.3 45.3 45.4 45.5 45.6 45.7 45.8 45.9 46.0 46.1 46.1 46.2 46.3 46.4 46.5 46.6 46.7 46.8 46.9 46.9 47.0 47.1 47.2 47.3 47.4 47.5 47.6 47.6 47.7 47.8 47.9 48.0 48.1 48.2 48.3 48.4 48.4 48.5 48.6 48.7 48.8 48.9 49.0 49.1 49.2 49.2 49.3 49.4 49.5 49.6 49.7 49.8 49.9 50.0 50.0 50.1 50.2 50.3 50.4 50.5 50.6 50.7 50.8 50.8 50.9 51.0 51.1 51.2 51.3 51.4 51.5 51.6 51.6 51.7 51.8 51.9 52.0 52.1 52.2 52.3 52.4 52.4 52.5 52.6 52.7 52.8 52.9 53.0 53.1 53.1 53.2 53.3 53.4 53.5 53.6 53.7 53.8 53.9 53.9 54.0 54.1 54.2 54.3 54.4 54.5 54.6 54.7 54.7 54.8 54.9 55.0 55.1 55.2 55.3 55.4 55.5 55.5 55.6 55.7 55.8 55.9 56.0 56.1 56.2 56.3 56.3 56.4 56.5 56.6 56.7 56.8 56.9 57.0 57.1 57.1 57.2 57.3 57.4 57.5 57.6 57.7 57.8 57.9 57.9 58.0 58.1 58.2 58.3 58.4 58.5 58.6 58.7 58.7 58.8 58.9 59.0 59.1 59.2 59.3 59.4 59.4 59.5 59.6 59.7 59.8 59.9 60.0 60.1 60.2 60.2 60.3 60.4 60.5 60.6 60.7 60.8 60.9 61.0 61.0 61.1 61.2 61.3 61.4 61.5 61.6 61.7 61.8 61.8 61.9 62.0 62.1 62.2 62.3 62.4 62.5 62.6 62.6 62.7 62.8 62.9 63.0 63.1 63.2 63.3 63.4 63.4 63.5 63.6 63.7 63.8 63.9 64.0 64.1 64.2 64.2 64.3 64.4 64.5 64.6 64.7 64.8 64.9 65.0 65.0 65.1 65.2 65.3 65.4 65.5 65.6 65.7 65.7 65.8 65.9 66.0 66.1 66.2 66.3 66.4 66.5 66.5 66.6 66.7 66.8 66.9 67.0 67.1 67.2 67.3 67.3 67.4 67.5 67.6 67.7 67.8 67.9 68.0 68.1 68.1 68.2 68.3 68.4 68.5 68.6 68.7 68.8 68.9 68.9 69.0 69.1 69.2 69.3 69.4 69.5 69.6 69.7 69.7 69.8 69.9 70.0 70.1 70.2 70.3 70.4 70.5 70.5 70.6 70.7 70.8 70.9 71.0 71.1 71.2 71.3 71.3 71.4 71.5 71.6 71.7 71.8 71.9 72.0 72.0 72.1 72.2 72.3 72.4 72.5 72.6 72.7 72.8 72.8 72.9 73.0 73.1 73.2 73.3 73.4 73.5 73.6 73.6 73.7 73.8 73.9 74.0 74.1 74.2 74.3 74.4 74.4 74.5 74.6 74.7 74.8 74.9 75.0 75.1 75.2 75.2 75.3 75.4 75.5 75.6 75.7 75.8 75.9 76.0 76.0 76.1 76.2 76.3 76.4 76.5 76.6 76.7 76.8 76.8 76.9 77.0 77.1 77.2 77.3 77.4 77.5 77.6 77.6 77.7 77.8 77.9 78.0 78.1 78.2 78.3 78.3 78.4 78.5 78.6 78.7 78.8 78.9 79.0 79.1 79.1 79.2 79.3 79.4 79.5 79.6 79.7 79.8 79.9 79.9 80.0 80.1 80.2 80.3 80.4 80.5 80.6 80.7 80.7 80.8 80.9 81.0 81.1 81.2 81.3 81.4 81.5 81.5 81.6 81.7 81.8 81.9 82.0 82.1 82.2 82.3 82.3 82.4 82.5 82.6 82.7 82.8 82.9 83.0 83.1 83.1 83.2 83.3 83.4 83.5 83.6 83.7 83.8 83.9 83.9 84.0 84.1 84.2 84.3 84.4 84.5 84.6 84.6 84.7 84.8 84.9 85.0 85.1 85.2 85.3 85.4 85.4 85.5 85.6 85.7 85.8 85.9 86.0 86.1 86.2 86.2 86.3 86.4 86.5 86.6 86.7 86.8 86.9 87.0 87.0 87.1 87.2 87.3 87.4 87.5 87.6 87.7 87.8 87.8 87.9 88.0 88.1 88.2 88.3 88.4 88.5 88.6 88.6 88.7 88.8 88.9 89.0 89.1 89.2 89.3 89.4 89.4 89.5 89.6 89.7 89.8 89.9 90.0 90.1 90.2 90.2 90.3 90.4 90.5 90.6 90.7 90.8 90.9 90.9 91.0 91.1 91.2 91.3 91.4 91.5 91.6 91.7 91.7 91.8 91.9 92.0 92.1 92.2 92.3 92.4 92.5 92.5 92.6 92.7 92.8 92.9 93.0 93.1 93.2 93.3 93.3 93.4 93.5 93.6 93.7 93.8 93.9 94.0 94.1 94.1 94.2 94.3 94.4 94.5 94.6 94.7 94.8 94.9 94.9 95.0 95.1 95.2 95.3 95.4 95.5 95.6 95.7 95.7 95.8 95.9 96.0 96.1 96.2 96.3 96.4 96.5 96.5 96.6 96.7 96.8 96.9 97.0 97.1 97.2 97.2 97.3 97.4 97.5 97.6 97.7 97.8 97.9 98.0 98.0 98.1 98.2 98.3 98.4 98.5 98.6 98.7 98.8 98.8 98.9 99.0 99.1 99.2 99.3 99.4 99.5 99.6 99.6 99.7 99.8 99.9 -found 49 predictions from path traversal Error with prediction: snap lend_intergenic: 6717, rend_intergenic: 3662 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 11101, rend_intergenic: 8527 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 19318, rend_intergenic: 11738 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 38036, rend_intergenic: 20108 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 47720, rend_intergenic: 39278 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 51713, rend_intergenic: 48662 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 61016, rend_intergenic: 59475 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 72196, rend_intergenic: 62364 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 94881, rend_intergenic: 78113 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 101720, rend_intergenic: 94975 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 106055, rend_intergenic: 101787 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 120878, rend_intergenic: 106876 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 126970, rend_intergenic: 123643 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 140072, rend_intergenic: 128461 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 152375, rend_intergenic: 144323 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 183820, rend_intergenic: 162521 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 190000, rend_intergenic: 184109 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 195110, rend_intergenic: 192199 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 200640, rend_intergenic: 196187 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 209374, rend_intergenic: 205224 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 227663, rend_intergenic: 217546 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 234797, rend_intergenic: 231902 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -reporting highest scoring path thru the trellis. -found 19 predictions persist after filtering for low support