-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_11/scaffold_11_3931988-4192489

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for GlimmerHMM_glimmerT_27504-T1
Valid prediction for GeneMark_model.47486_t
Valid prediction for snap_scaffold_11-snap.1026-T1
Valid prediction for snap_scaffold_11-snap.983-T1
Valid prediction for GeneMark_model.47462_t
Valid prediction for Augustus_model.g18333.t1
Valid prediction for GeneMark_model.47465_t
Valid prediction for GeneMark_model.47470_t
Valid prediction for snap_scaffold_11-snap.1022-T1
Valid prediction for snap_scaffold_11-snap.991-T1
Valid prediction for snap_scaffold_11-snap.1018-T1
Valid prediction for snap_scaffold_11-snap.1034-T1
Valid prediction for GeneMark_model.47458_t
Valid prediction for GlimmerHMM_glimmerT_27480-T1
Valid prediction for snap_scaffold_11-snap.1004-T1
Valid prediction for snap_scaffold_11-snap.986-T1
Valid prediction for GeneMark_model.47468_t
Valid prediction for GeneMark_model.47472_t
Valid prediction for snap_scaffold_11-snap.988-T1
Valid prediction for snap_scaffold_11-snap.1027-T1
Valid prediction for GeneMark_model.47432_t
Valid prediction for snap_scaffold_11-snap.1035-T1
Valid prediction for snap_scaffold_11-snap.1000-T1
Valid prediction for GlimmerHMM_glimmerT_27491-T1
Valid prediction for snap_scaffold_11-snap.1017-T1
Valid prediction for snap_scaffold_11-snap.1023-T1
Valid prediction for snap_scaffold_11-snap.1029-T1
Valid prediction for snap_scaffold_11-snap.1011-T1
Valid prediction for snap_scaffold_11-snap.995-T1
Valid prediction for GlimmerHMM_glimmerT_27487-T1
Valid prediction for GlimmerHMM_glimmerT_27501-T1
Valid prediction for snap_scaffold_11-snap.1020-T1
Valid prediction for snap_scaffold_11-snap.993-T1
Valid prediction for GeneMark_model.47451_t
Valid prediction for GeneMark_model.47417_t
Valid prediction for snap_scaffold_11-snap.1014-T1
Valid prediction for GeneMark_model.47428_t
Valid prediction for GeneMark_model.47437_t
Valid prediction for GeneMark_model.47443_t
Valid prediction for GeneMark_model.47484_t
Valid prediction for snap_scaffold_11-snap.997-T1
Valid prediction for GlimmerHMM_glimmerT_27472-T1
Couldn't classify 15302, 15620
Sorry, prediction pasa_asmbl_5431.p1 fails validation.
(GCT)	 AG	15302-15620	GT	TGG
(GTG)	 AG	16164-16458	GT	AGG
(CTC)	 AG	16661-16781	TC	AGT
-recovered pasa_asmbl_5431.p1, terminal, 16661, 16781
-recovered pasa_asmbl_5431.p1, internal, 15302, 15620
-recovered pasa_asmbl_5431.p1, internal, 16164, 16458
Valid prediction for GlimmerHMM_glimmerT_27478-T1
Valid prediction for Augustus_model.g18334.t1
Valid prediction for Augustus_model.g18324.t1
Valid prediction for snap_scaffold_11-snap.981-T1
Valid prediction for GeneMark_model.47420_t
Valid prediction for GlimmerHMM_glimmerT_27505-T1
Valid prediction for snap_scaffold_11-snap.1010-T1
Valid prediction for GeneMark_model.47479_t
Valid prediction for Augustus_model.g18327.t1
Valid prediction for snap_scaffold_11-snap.999-T1
Valid prediction for GeneMark_model.47450_t
Valid prediction for snap_scaffold_11-snap.1006-T1
Valid prediction for GeneMark_model.47422_t
Valid prediction for snap_scaffold_11-snap.1032-T1
Valid prediction for snap_scaffold_11-snap.1012-T1
Valid prediction for GlimmerHMM_glimmerT_27482-T1
Valid prediction for snap_scaffold_11-snap.979-T1
Valid prediction for GlimmerHMM_glimmerT_27485-T1
Valid prediction for GlimmerHMM_glimmerT_27495-T1
Valid prediction for snap_scaffold_11-snap.989-T1
Valid prediction for GeneMark_model.47446_t
Valid prediction for GlimmerHMM_glimmerT_27497-T1
Valid prediction for GeneMark_model.47442_t
Valid prediction for snap_scaffold_11-snap.1031-T1
Valid prediction for GeneMark_model.47488_t
Valid prediction for GeneMark_model.47445_t
Valid prediction for GeneMark_model.47460_t
Valid prediction for GlimmerHMM_glimmerT_27506-T1
Valid prediction for GlimmerHMM_glimmerT_27486-T1
Valid prediction for GeneMark_model.47481_t
Valid prediction for GlimmerHMM_glimmerT_27496-T1
Valid prediction for GeneMark_model.47418_t
Valid prediction for GeneMark_model.47463_t
Valid prediction for GeneMark_model.47457_t
Valid prediction for GeneMark_model.47476_t
Valid prediction for GeneMark_model.47425_t
Valid prediction for GeneMark_model.47452_t
Valid prediction for GlimmerHMM_glimmerT_27471-T1
Valid prediction for GeneMark_model.47439_t
Valid prediction for GeneMark_model.47483_t
Valid prediction for GlimmerHMM_glimmerT_27498-T1
Valid prediction for GlimmerHMM_glimmerT_27489-T1
Valid prediction for GeneMark_model.47477_t
Valid prediction for GeneMark_model.47474_t
Valid prediction for GeneMark_model.47454_t
Valid prediction for GeneMark_model.47436_t
Valid prediction for GlimmerHMM_glimmerT_27507-T1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for GeneMark_model.47456_t
Valid prediction for GlimmerHMM_glimmerT_27494-T1
Valid prediction for snap_scaffold_11-snap.1030-T1
Valid prediction for GeneMark_model.47466_t
Valid prediction for snap_scaffold_11-snap.980-T1
Valid prediction for GlimmerHMM_glimmerT_27473-T1
Couldn't classify 128481, 129134
Sorry, prediction pasa_asmbl_6568.p1 fails validation.
(TTC)	 GC	128481-129134	AG	GTA
Valid prediction for GeneMark_model.47429_t
Valid prediction for GeneMark_model.47424_t
Valid prediction for GeneMark_model.47447_t
Valid prediction for snap_scaffold_11-snap.1016-T1
Valid prediction for GeneMark_model.47475_t
Valid prediction for Augustus_model.g18332.t1
Valid prediction for GeneMark_model.47459_t
Valid prediction for GeneMark_model.47441_t
Valid prediction for snap_scaffold_11-snap.987-T1
Valid prediction for snap_scaffold_11-snap.1019-T1
Valid prediction for GeneMark_model.47434_t
Valid prediction for snap_scaffold_11-snap.976-T1
Valid prediction for GeneMark_model.47453_t
Valid prediction for GlimmerHMM_glimmerT_27484-T1
Valid prediction for GlimmerHMM_glimmerT_27492-T1
Valid prediction for GlimmerHMM_glimmerT_27483-T1
Valid prediction for GeneMark_model.47419_t
Valid prediction for snap_scaffold_11-snap.1021-T1
Valid prediction for GeneMark_model.47471_t
Valid prediction for snap_scaffold_11-snap.1013-T1
Valid prediction for snap_scaffold_11-snap.1005-T1
Valid prediction for GeneMark_model.47487_t
Valid prediction for Augustus_model.g18325.t1
Valid prediction for GlimmerHMM_glimmerT_27470-T1
Valid prediction for Augustus_model.g18336.t1
Valid prediction for GlimmerHMM_glimmerT_27488-T1
Valid prediction for snap_scaffold_11-snap.1025-T1
Valid prediction for GeneMark_model.47435_t
Valid prediction for Augustus_model.g18335.t1
Valid prediction for Augustus_model.g18328.t1
Valid prediction for snap_scaffold_11-snap.1009-T1
Valid prediction for snap_scaffold_11-snap.982-T1
Valid prediction for GlimmerHMM_glimmerT_27477-T1
Valid prediction for GeneMark_model.47473_t
Valid prediction for GeneMark_model.47440_t
Valid prediction for snap_scaffold_11-snap.992-T1
Valid prediction for snap_scaffold_11-snap.1003-T1
Valid prediction for GlimmerHMM_glimmerT_27476-T1
Valid prediction for GlimmerHMM_glimmerT_27475-T1
Valid prediction for GeneMark_model.47485_t
Valid prediction for GeneMark_model.47438_t
Valid prediction for GeneMark_model.47431_t
Valid prediction for snap_scaffold_11-snap.1033-T1
Valid prediction for GeneMark_model.47455_t
Valid prediction for GlimmerHMM_glimmerT_27490-T1
Valid prediction for Augustus_model.g18331.t1
Valid prediction for snap_scaffold_11-snap.1036-T1
Valid prediction for snap_scaffold_11-snap.1002-T1
Valid prediction for GeneMark_model.47464_t
Valid prediction for snap_scaffold_11-snap.998-T1
Valid prediction for snap_scaffold_11-snap.985-T1
Valid prediction for GlimmerHMM_glimmerT_27474-T1
Valid prediction for snap_scaffold_11-snap.1001-T1
Valid prediction for GeneMark_model.47489_t
Valid prediction for GlimmerHMM_glimmerT_27508-T1
Valid prediction for GlimmerHMM_glimmerT_27499-T1
Valid prediction for GeneMark_model.47423_t
Valid prediction for GlimmerHMM_glimmerT_27500-T1
Valid prediction for GlimmerHMM_glimmerT_27502-T1
Valid prediction for GeneMark_model.47426_t
Valid prediction for snap_scaffold_11-snap.978-T1
Valid prediction for snap_scaffold_11-snap.1028-T1
Valid prediction for GeneMark_model.47421_t
Valid prediction for GeneMark_model.47449_t
Valid prediction for snap_scaffold_11-snap.990-T1
Valid prediction for GlimmerHMM_glimmerT_27493-T1
Valid prediction for GeneMark_model.47444_t
Valid prediction for GlimmerHMM_glimmerT_27481-T1
Valid prediction for GeneMark_model.47433_t
Valid prediction for GeneMark_model.47430_t
Valid prediction for snap_scaffold_11-snap.994-T1
Valid prediction for snap_scaffold_11-snap.1007-T1
Valid prediction for GeneMark_model.47427_t
Valid prediction for GeneMark_model.47478_t
Valid prediction for Augustus_model.g18330.t1
Valid prediction for GeneMark_model.47480_t
Valid prediction for GlimmerHMM_glimmerT_27503-T1
Valid prediction for snap_scaffold_11-snap.1008-T1
Valid prediction for GeneMark_model.47469_t
Valid prediction for snap_scaffold_11-snap.1024-T1
Valid prediction for GeneMark_model.47482_t
Valid prediction for Augustus_model.g18329.t1
Valid prediction for snap_scaffold_11-snap.984-T1
Valid prediction for Augustus_model.g18326.t1
Valid prediction for snap_scaffold_11-snap.977-T1
Valid prediction for GlimmerHMM_glimmerT_27479-T1
Valid prediction for snap_scaffold_11-snap.1015-T1
Valid prediction for GeneMark_model.47461_t
Valid prediction for snap_scaffold_11-snap.996-T1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 21451, rend_intergenic: 18292  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 22532, rend_intergenic: 21600  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 29100, rend_intergenic: 24571  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 32395, rend_intergenic: 29398  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 35927, rend_intergenic: 32992  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 42442, rend_intergenic: 37943  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 43828, rend_intergenic: 42463  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 46321, rend_intergenic: 44128  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 57097, rend_intergenic: 51508  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 61348, rend_intergenic: 58387  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 63288, rend_intergenic: 61920  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 67851, rend_intergenic: 66270  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 76903, rend_intergenic: 69131  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 82261, rend_intergenic: 79787  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 101032, rend_intergenic: 88247  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 109897, rend_intergenic: 105964  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 111661, rend_intergenic: 109922  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 128296, rend_intergenic: 120877  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 149027, rend_intergenic: 138623  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 155281, rend_intergenic: 151169  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 184160, rend_intergenic: 165483  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 194652, rend_intergenic: 188994  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 197523, rend_intergenic: 197123  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 211727, rend_intergenic: 201649  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 219239, rend_intergenic: 214138  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 230606, rend_intergenic: 230054  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 244088, rend_intergenic: 231785  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 249374, rend_intergenic: 245763  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 251852, rend_intergenic: 250416  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 260502
-exon list size: 984


building trellis

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51.4    
51.5    
51.6    
51.7    
51.8    
51.9    
52.0    
52.1    
52.2    
52.3    
52.4    
52.5    
52.6    
52.7    
52.8    
52.9    
53.0    
53.1    
53.2    
53.3    
53.4    
53.5    
53.7    
53.8    
53.9    
54.0    
54.1    
54.2    
54.3    
54.4    
54.5    
54.6    
54.7    
54.8    
54.9    
55.0    
55.1    
55.2    
55.3    
55.4    
55.5    
55.6    
55.7    
55.8    
55.9    
56.0    
56.1    
56.2    
56.3    
56.4    
56.5    
56.6    
56.7    
56.8    
56.9    
57.0    
57.1    
57.2    
57.3    
57.4    
57.5    
57.6    
57.7    
57.8    
57.9    
58.0    
58.1    
58.2    
58.3    
58.4    
58.5    
58.6    
58.7    
58.8    
58.9    
59.0    
59.1    
59.2    
59.3    
59.4    
59.5    
59.6    
59.7    
59.8    
59.9    
60.0    
60.1    
60.2    
60.3    
60.4    
60.5    
60.6    
60.8    
60.9    
61.0    
61.1    
61.2    
61.3    
61.4    
61.5    
61.6    
61.7    
61.8    
61.9    
62.0    
62.1    
62.2    
62.3    
62.4    
62.5    
62.6    
62.7    
62.8    
62.9    
63.0    
63.1    
63.2    
63.3    
63.4    
63.5    
63.6    
63.7    
63.8    
63.9    
64.0    
64.1    
64.2    
64.3    
64.4    
64.5    
64.6    
64.7    
64.8    
64.9    
65.0    
65.1    
65.2    
65.3    
65.4    
65.5    
65.6    
65.7    
65.8    
65.9    
66.0    
66.1    
66.2    
66.3    
66.4    
66.5    
66.6    
66.7    
66.8    
66.9    
67.0    
67.1    
67.2    
67.3    
67.4    
67.5    
67.6    
67.7    
67.8    
68.0    
68.1    
68.2    
68.3    
68.4    
68.5    
68.6    
68.7    
68.8    
68.9    
69.0    
69.1    
69.2    
69.3    
69.4    
69.5    
69.6    
69.7    
69.8    
69.9    
70.0    
70.1    
70.2    
70.3    
70.4    
70.5    
70.6    
70.7    
70.8    
70.9    
71.0    
71.1    
71.2    
71.3    
71.4    
71.5    
71.6    
71.7    
71.8    
71.9    
72.0    
72.1    
72.2    
72.3    
72.4    
72.5    
72.6    
72.7    
72.8    
72.9    
73.0    
73.1    
73.2    
73.3    
73.4    
73.5    
73.6    
73.7    
73.8    
73.9    
74.0    
74.1    
74.2    
74.3    
74.4    
74.5    
74.6    
74.7    
74.8    
74.9    
75.1    
75.2    
75.3    
75.4    
75.5    
75.6    
75.7    
75.8    
75.9    
76.0    
76.1    
76.2    
76.3    
76.4    
76.5    
76.6    
76.7    
76.8    
76.9    
77.0    
77.1    
77.2    
77.3    
77.4    
77.5    
77.6    
77.7    
77.8    
77.9    
78.0    
78.1    
78.2    
78.3    
78.4    
78.5    
78.6    
78.7    
78.8    
78.9    
79.0    
79.1    
79.2    
79.3    
79.4    
79.5    
79.6    
79.7    
79.8    
79.9    
80.0    
80.1    
80.2    
80.3    
80.4    
80.5    
80.6    
80.7    
80.8    
80.9    
81.0    
81.1    
81.2    
81.3    
81.4    
81.5    
81.6    
81.7    
81.8    
81.9    
82.0    
82.2    
82.3    
82.4    
82.5    
82.6    
82.7    
82.8    
82.9    
83.0    
83.1    
83.2    
83.3    
83.4    
83.5    
83.6    
83.7    
83.8    
83.9    
84.0    
84.1    
84.2    
84.3    
84.4    
84.5    
84.6    
84.7    
84.8    
84.9    
85.0    
85.1    
85.2    
85.3    
85.4    
85.5    
85.6    
85.7    
85.8    
85.9    
86.0    
86.1    
86.2    
86.3    
86.4    
86.5    
86.6    
86.7    
86.8    
86.9    
87.0    
87.1    
87.2    
87.3    
87.4    
87.5    
87.6    
87.7    
87.8    
87.9    
88.0    
88.1    
88.2    
88.3    
88.4    
88.5    
88.6    
88.7    
88.8    
88.9    
89.0    
89.1    
89.2    
89.4    
89.5    
89.6    
89.7    
89.8    
89.9    
90.0    
90.1    
90.2    
90.3    
90.4    
90.5    
90.6    
90.7    
90.8    
90.9    
91.0    
91.1    
91.2    
91.3    
91.4    
91.5    
91.6    
91.7    
91.8    
91.9    
92.0    
92.1    
92.2    
92.3    
92.4    
92.5    
92.6    
92.7    
92.8    
92.9    
93.0    
93.1    
93.2    
93.3    
93.4    
93.5    
93.6    
93.7    
93.8    
93.9    
94.0    
94.1    
94.2    
94.3    
94.4    
94.5    
94.6    
94.7    
94.8    
94.9    
95.0    
95.1    
95.2    
95.3    
95.4    
95.5    
95.6    
95.7    
95.8    
95.9    
96.0    
96.1    
96.2    
96.3    
96.5    
96.6    
96.7    
96.8    
96.9    
97.0    
97.1    
97.2    
97.3    
97.4    
97.5    
97.6    
97.7    
97.8    
97.9    
98.0    
98.1    
98.2    
98.3    
98.4    
98.5    
98.6    
98.7    
98.8    
98.9    
99.0    
99.1    
99.2    
99.3    
99.4    
99.5    
99.6    
99.7    
99.8    
99.9    
-found 49 predictions from path traversal
Error with prediction: snap lend_intergenic: 21451, rend_intergenic: 18292  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 22532, rend_intergenic: 21600  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 29100, rend_intergenic: 24571  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 32395, rend_intergenic: 29398  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 35927, rend_intergenic: 32992  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 42442, rend_intergenic: 37943  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 43828, rend_intergenic: 42463  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 46321, rend_intergenic: 44128  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 57097, rend_intergenic: 51508  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 61348, rend_intergenic: 58387  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 63288, rend_intergenic: 61920  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 67851, rend_intergenic: 66270  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 76903, rend_intergenic: 69131  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 82261, rend_intergenic: 79787  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 101032, rend_intergenic: 88247  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 109897, rend_intergenic: 105964  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 111661, rend_intergenic: 109922  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 128296, rend_intergenic: 120877  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 149027, rend_intergenic: 138623  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 155281, rend_intergenic: 151169  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 184160, rend_intergenic: 165483  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 194652, rend_intergenic: 188994  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 197523, rend_intergenic: 197123  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 211727, rend_intergenic: 201649  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 219239, rend_intergenic: 214138  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 230606, rend_intergenic: 230054  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 244088, rend_intergenic: 231785  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 249374, rend_intergenic: 245763  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 251852, rend_intergenic: 250416  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 11 predictions persist after filtering for low support