-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_11/scaffold_11_313756-589460

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for snap_scaffold_11-snap.81-T1
Valid prediction for Augustus_model.g17985.t1
Valid prediction for GlimmerHMM_glimmerT_26877-T1
Valid prediction for GeneMark_model.46380_t
Valid prediction for GeneMark_model.46403_t
Valid prediction for GeneMark_model.46442_t
Valid prediction for snap_scaffold_11-snap.125-T1
Valid prediction for snap_scaffold_11-snap.116-T1
Valid prediction for Augustus_model.g17974.t1
Valid prediction for snap_scaffold_11-snap.121-T1
Valid prediction for GeneMark_model.46452_t
Valid prediction for GeneMark_model.46444_t
Valid prediction for GlimmerHMM_glimmerT_26888-T1
Valid prediction for GeneMark_model.46420_t
Valid prediction for GeneMark_model.46392_t
Valid prediction for GeneMark_model.46376_t
Valid prediction for snap_scaffold_11-snap.83-T1
Valid prediction for GeneMark_model.46396_t
Valid prediction for snap_scaffold_11-snap.93-T1
Valid prediction for GeneMark_model.46418_t
Valid prediction for GlimmerHMM_glimmerT_26859-T1
Valid prediction for snap_scaffold_11-snap.99-T1
Valid prediction for GlimmerHMM_glimmerT_26858-T1
Valid prediction for GlimmerHMM_glimmerT_26870-T1
Valid prediction for snap_scaffold_11-snap.91-T1
Valid prediction for GeneMark_model.46386_t
Valid prediction for snap_scaffold_11-snap.131-T1
Valid prediction for GlimmerHMM_glimmerT_26862-T1
Valid prediction for CodingQuarry_transcript_7915-T1
Valid prediction for pasa_asmbl_5244.p1
Couldn't classify 257930, 258228
Sorry, prediction pasa_asmbl_5251.p1 fails validation.
(ATC)	 AC	257930-258228	GT	CTG
(CCC)	 AG	258622-258694	GT	AGG
(GAA)	 AG	258781-258870	GT	AGG
(ATG)	 AG	259553-259675	GT	AGG
(GGA)	 AG	259833-259937	GT	TGG
(GCC)	 AG	260528-260591	GT	AGG
(GAA)	 AG	260686-260765	GT	AAG
(AAG)	 AG	261348-261449	GT	CGG
(GAA)	 AG	261583-261633	GT	AGG
(AGG)	 AG	262304-262540	GT	AGG
(GTG)	 AG	263592-263713	GT	GGG
(ATG)	 AG	264092-264141	GT	AGG
(GTA)	 AG	264518-264555	AC	AGA
-recovered pasa_asmbl_5251.p1, initial, 259553, 259675
-recovered pasa_asmbl_5251.p1, initial, 264092, 264141
-recovered pasa_asmbl_5251.p1, terminal, 264518, 264555
-recovered pasa_asmbl_5251.p1, internal, 258622, 258694
-recovered pasa_asmbl_5251.p1, internal, 258781, 258870
-recovered pasa_asmbl_5251.p1, internal, 259553, 259675
-recovered pasa_asmbl_5251.p1, internal, 259833, 259937
-recovered pasa_asmbl_5251.p1, internal, 260528, 260591
-recovered pasa_asmbl_5251.p1, internal, 260686, 260765
-recovered pasa_asmbl_5251.p1, internal, 261348, 261449
-recovered pasa_asmbl_5251.p1, internal, 261583, 261633
-recovered pasa_asmbl_5251.p1, internal, 262304, 262540
-recovered pasa_asmbl_5251.p1, internal, 263592, 263713
-recovered pasa_asmbl_5251.p1, internal, 264092, 264141
Valid prediction for snap_scaffold_11-snap.75-T1
Valid prediction for GeneMark_model.46407_t
Valid prediction for snap_scaffold_11-snap.119-T1
Valid prediction for GeneMark_model.46440_t
Valid prediction for GeneMark_model.46388_t
Valid prediction for GlimmerHMM_glimmerT_26855-T1
Valid prediction for snap_scaffold_11-snap.114-T1
Valid prediction for GlimmerHMM_glimmerT_26875-T1
Valid prediction for Augustus_model.g17980.t1
Valid prediction for snap_scaffold_11-snap.104-T1
Valid prediction for snap_scaffold_11-snap.73-T1
Valid prediction for Augustus_model.g17981.t1
Valid prediction for GeneMark_model.46378_t
Valid prediction for GeneMark_model.46446_t
Valid prediction for Augustus_model.g17991.t1
Valid prediction for snap_scaffold_11-snap.85-T1
Valid prediction for GeneMark_model.46436_t
Valid prediction for GeneMark_model.46438_t
Valid prediction for GeneMark_model.46415_t
Valid prediction for GeneMark_model.46413_t
Valid prediction for snap_scaffold_11-snap.95-T1
Valid prediction for Augustus_model.g17979.t1
Valid prediction for CodingQuarry_transcript_7914-T1
Valid prediction for snap_scaffold_11-snap.107-T1
Valid prediction for GeneMark_model.46417_t
Valid prediction for GeneMark_model.46430_t
Valid prediction for GeneMark_model.46450_t
Valid prediction for GeneMark_model.46419_t
Valid prediction for HiQ_model.g17973.t1
Valid prediction for Augustus_model.g17987.t1
Valid prediction for GeneMark_model.46449_t
Valid prediction for GeneMark_model.46454_t
Valid prediction for GlimmerHMM_glimmerT_26884-T1
Valid prediction for GeneMark_model.46429_t
Couldn't classify 267772, 267906
Sorry, prediction pasa_asmbl_5252.p1 fails validation.
(CCC)	 CC	267772-267906	GT	AGG
(TCC)	 AG	269149-269235	GT	AGG
(GTC)	 AG	269461-269579	GT	AGG
(AGA)	 AG	269682-269740	GT	AGG
(CTT)	 AG	269837-269934	GT	AGG
(ATC)	 AG	270485-270553	GT	CTG
(GTC)	 AG	271456-271500	GT	AGG
(TTT)	 AG	272554-272669	GT	AGG
(GGT)	 AG	273582-273639	AA	GAA
-recovered pasa_asmbl_5252.p1, terminal, 273582, 273639
-recovered pasa_asmbl_5252.p1, internal, 269149, 269235
-recovered pasa_asmbl_5252.p1, internal, 269461, 269579
-recovered pasa_asmbl_5252.p1, internal, 269682, 269740
-recovered pasa_asmbl_5252.p1, internal, 269837, 269934
-recovered pasa_asmbl_5252.p1, internal, 270485, 270553
-recovered pasa_asmbl_5252.p1, internal, 271456, 271500
-recovered pasa_asmbl_5252.p1, internal, 272554, 272669
Valid prediction for snap_scaffold_11-snap.88-T1
Valid prediction for snap_scaffold_11-snap.97-T1
Valid prediction for snap_scaffold_11-snap.103-T1
Valid prediction for GlimmerHMM_glimmerT_26856-T1
Valid prediction for GeneMark_model.46409_t
Valid prediction for GlimmerHMM_glimmerT_26879-T1
Valid prediction for snap_scaffold_11-snap.92-T1
Valid prediction for snap_scaffold_11-snap.72-T1
Valid prediction for snap_scaffold_11-snap.69-T1
Sorry, intron length (7) is less than minimum required (10)
Valid prediction for snap_scaffold_11-snap.70-T1
Valid prediction for GlimmerHMM_glimmerT_26881-T1
Valid prediction for snap_scaffold_11-snap.127-T1
Valid prediction for snap_scaffold_11-snap.106-T1
Valid prediction for GeneMark_model.46402_t
Valid prediction for snap_scaffold_11-snap.94-T1
Valid prediction for GeneMark_model.46390_t
Valid prediction for Augustus_model.g17983.t1
Couldn't classify 255940, 256479
Sorry, prediction pasa_asmbl_5249.p1 fails validation.
(ATG)	 AA	253325-253453	GT	AGG
(GTT)	 AG	253619-253734	GT	GTG
(GCC)	 AG	253909-254011	GT	AGG
(GTG)	 AG	254198-254371	GT	TGG
(GAG)	 AG	254469-254549	GT	TGG
(GAG)	 AG	254817-254980	GT	CGG
(ACG)	 AG	255259-255359	GT	GGG
(GAG)	 AG	255667-255824	GT	AGG
(ATC)	 AG	255940-256479	GG	GGG
-recovered pasa_asmbl_5249.p1, initial, 253325, 253453
-recovered pasa_asmbl_5249.p1, internal, 253619, 253734
-recovered pasa_asmbl_5249.p1, internal, 253909, 254011
-recovered pasa_asmbl_5249.p1, internal, 254198, 254371
-recovered pasa_asmbl_5249.p1, internal, 254469, 254549
-recovered pasa_asmbl_5249.p1, internal, 254817, 254980
-recovered pasa_asmbl_5249.p1, internal, 255259, 255359
-recovered pasa_asmbl_5249.p1, internal, 255667, 255824
Valid prediction for GeneMark_model.46385_t
Valid prediction for GeneMark_model.46374_t
Valid prediction for GeneMark_model.46423_t
Valid prediction for GeneMark_model.46411_t
Valid prediction for GeneMark_model.46405_t
Valid prediction for GlimmerHMM_glimmerT_26874-T1
Valid prediction for GeneMark_model.46394_t
Valid prediction for GeneMark_model.46421_t
Valid prediction for snap_scaffold_11-snap.110-T1
Valid prediction for GlimmerHMM_glimmerT_26867-T1
Valid prediction for GeneMark_model.46425_t
Valid prediction for GeneMark_model.46432_t
Valid prediction for GeneMark_model.46427_t
Valid prediction for snap_scaffold_11-snap.87-T1
Valid prediction for snap_scaffold_11-snap.78-T1
Valid prediction for snap_scaffold_11-snap.90-T1
Valid prediction for GeneMark_model.46434_t

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for snap_scaffold_11-snap.112-T1
Valid prediction for snap_scaffold_11-snap.122-T1
Valid prediction for GeneMark_model.46443_t
Valid prediction for GeneMark_model.46435_t
Valid prediction for GlimmerHMM_glimmerT_26873-T1
Valid prediction for Augustus_model.g17984.t1
Valid prediction for GlimmerHMM_glimmerT_26869-T1
Valid prediction for snap_scaffold_11-snap.102-T1
Valid prediction for GlimmerHMM_glimmerT_26887-T1
Valid prediction for snap_scaffold_11-snap.71-T1
Valid prediction for snap_scaffold_11-snap.82-T1
Valid prediction for GeneMark_model.46410_t
Couldn't classify 264654, 264778
Couldn't classify 265947, 266090
Sorry, prediction pasa_asmbl_6367.p1 fails validation.
(GCT)	 CT	264654-264778	GT	AGG
(CTG)	 AG	265710-265824	GT	AGG
(GAA)	 AG	265947-266090	AC	CAA
-recovered pasa_asmbl_6367.p1, internal, 265710, 265824
Valid prediction for GeneMark_model.46414_t
Valid prediction for snap_scaffold_11-snap.118-T1
Valid prediction for snap_scaffold_11-snap.74-T1
Valid prediction for snap_scaffold_11-snap.96-T1
Valid prediction for GlimmerHMM_glimmerT_26871-T1
Valid prediction for snap_scaffold_11-snap.98-T1
Valid prediction for snap_scaffold_11-snap.80-T1
Valid prediction for GlimmerHMM_glimmerT_26854-T1
Valid prediction for Augustus_model.g17988.t1
Valid prediction for GeneMark_model.46375_t
Valid prediction for GlimmerHMM_glimmerT_26882-T1
Valid prediction for snap_scaffold_11-snap.123-T1
Valid prediction for snap_scaffold_11-snap.129-T1
Valid prediction for GeneMark_model.46373_t
Valid prediction for snap_scaffold_11-snap.100-T1
Valid prediction for snap_scaffold_11-snap.115-T1
Valid prediction for GlimmerHMM_glimmerT_26861-T1
Valid prediction for GeneMark_model.46408_t
Valid prediction for Augustus_model.g17978.t1
Valid prediction for snap_scaffold_11-snap.77-T1
Valid prediction for snap_scaffold_11-snap.130-T1
Valid prediction for GeneMark_model.46445_t
Valid prediction for GeneMark_model.46377_t
Valid prediction for GlimmerHMM_glimmerT_26866-T1
Valid prediction for GlimmerHMM_glimmerT_26878-T1
Valid prediction for GeneMark_model.46433_t
Valid prediction for GlimmerHMM_glimmerT_26860-T1
Valid prediction for GlimmerHMM_glimmerT_26868-T1
Valid prediction for HiQ_model.g17990.t1
Valid prediction for GeneMark_model.46448_t
Valid prediction for GlimmerHMM_glimmerT_26857-T1
Valid prediction for GeneMark_model.46453_t
Valid prediction for snap_scaffold_11-snap.126-T1
Valid prediction for snap_scaffold_11-snap.109-T1
Valid prediction for GeneMark_model.46393_t
Valid prediction for snap_scaffold_11-snap.113-T1
Valid prediction for CodingQuarry_transcript_7916-T1
Valid prediction for snap_scaffold_11-snap.79-T1
Valid prediction for CodingQuarry_transcript_7913-T1
Valid prediction for snap_scaffold_11-snap.101-T1
Valid prediction for GlimmerHMM_glimmerT_26883-T1
Valid prediction for GeneMark_model.46441_t
Valid prediction for GeneMark_model.46381_t
Valid prediction for GeneMark_model.46416_t
Valid prediction for GeneMark_model.46387_t
Valid prediction for snap_scaffold_11-snap.117-T1
Valid prediction for snap_scaffold_11-snap.128-T1
Valid prediction for Augustus_model.g17982.t1
Valid prediction for GeneMark_model.46382_t
Valid prediction for snap_scaffold_11-snap.111-T1
Sorry, intron length (3) is less than minimum required (10)
Valid prediction for GlimmerHMM_glimmerT_26853-T1
Valid prediction for GeneMark_model.46400_t
Valid prediction for pasa_asmbl_6369.p1
Valid prediction for snap_scaffold_11-snap.108-T1
Valid prediction for GeneMark_model.46437_t
Valid prediction for GlimmerHMM_glimmerT_26885-T1
Valid prediction for GeneMark_model.46391_t
Valid prediction for Augustus_model.g17976.t1
Valid prediction for GeneMark_model.46395_t
Valid prediction for Augustus_model.g17977.t1
Valid prediction for GeneMark_model.46412_t
Valid prediction for GlimmerHMM_glimmerT_26864-T1
Valid prediction for Augustus_model.g17972.t1
Valid prediction for GlimmerHMM_glimmerT_26872-T1
Valid prediction for GeneMark_model.46406_t
Valid prediction for GeneMark_model.46424_t
Valid prediction for snap_scaffold_11-snap.120-T1
Valid prediction for GeneMark_model.46439_t
Valid prediction for Augustus_model.g17971.t1
Valid prediction for snap_scaffold_11-snap.124-T1
Valid prediction for GeneMark_model.46404_t
Valid prediction for GeneMark_model.46401_t
Valid prediction for GeneMark_model.46431_t
Valid prediction for GeneMark_model.46422_t
Valid prediction for GeneMark_model.46398_t
Valid prediction for GeneMark_model.46384_t
Valid prediction for GlimmerHMM_glimmerT_26880-T1
Valid prediction for snap_scaffold_11-snap.86-T1
Sorry, intron length (7) is less than minimum required (10)
Valid prediction for GeneMark_model.46383_t
Valid prediction for GlimmerHMM_glimmerT_26865-T1
Valid prediction for snap_scaffold_11-snap.84-T1
Valid prediction for Augustus_model.g17975.t1
Valid prediction for snap_scaffold_11-snap.105-T1
Sorry, intron length (3) is less than minimum required (10)
Sorry, intron length (3) is less than minimum required (10)
Valid prediction for snap_scaffold_11-snap.89-T1
Valid prediction for GeneMark_model.46379_t
Valid prediction for snap_scaffold_11-snap.76-T1
Valid prediction for Augustus_model.g17986.t1
Valid prediction for GeneMark_model.46397_t
Valid prediction for Augustus_model.g17989.t1
Valid prediction for GeneMark_model.46426_t
Valid prediction for snap_scaffold_11-snap.68-T1
Valid prediction for GlimmerHMM_glimmerT_26863-T1
Couldn't classify 258829, 258924
Sorry, prediction pasa_asmbl_7326.p1 fails validation.
(ATG)	 AG	256611-256716	GT	AGG
(GAG)	 AG	257419-257619	GT	CGG
(GGT)	 AG	257698-257880	GT	AGG
(GGG)	 AG	258003-258028	GT	AGG
(GAC)	 AG	258829-258924	TA	CAT
-recovered pasa_asmbl_7326.p1, initial, 256611, 256716
add_exon() Sorry, pasa_asmbl_7326.p1 257698-257880-terminal-1 is invalid.
-recovered pasa_asmbl_7326.p1, terminal, 257698, 257880
-recovered pasa_asmbl_7326.p1, internal, 256611, 256716
-recovered pasa_asmbl_7326.p1, internal, 257419, 257619
-recovered pasa_asmbl_7326.p1, internal, 257698, 257880
-recovered pasa_asmbl_7326.p1, internal, 258003, 258028
Valid prediction for GeneMark_model.46451_t
Valid prediction for GlimmerHMM_glimmerT_26886-T1
Valid prediction for GlimmerHMM_glimmerT_26876-T1
Sorry, intron length (4) is less than minimum required (10)

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 14215, rend_intergenic: 2840  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 18027, rend_intergenic: 15684  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 31208, rend_intergenic: 28935  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 35631, rend_intergenic: 31423  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 40629, rend_intergenic: 38635  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 44747, rend_intergenic: 41071  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 45470, rend_intergenic: 44782  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 53887, rend_intergenic: 50848  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 54776, rend_intergenic: 54419  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 57696, rend_intergenic: 55294  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 61894, rend_intergenic: 58072  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 72370, rend_intergenic: 64129  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 110369, rend_intergenic: 73137  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 124497, rend_intergenic: 111607  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 129492, rend_intergenic: 125948  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 143165, rend_intergenic: 130078  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 147017, rend_intergenic: 143170  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 184597, rend_intergenic: 177582  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 188567, rend_intergenic: 185114  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 196851, rend_intergenic: 189519  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 207824, rend_intergenic: 197630  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 214865, rend_intergenic: 208204  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 216379, rend_intergenic: 215982  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 219209, rend_intergenic: 216534  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 226237, rend_intergenic: 221006  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 231340, rend_intergenic: 226492  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 232332, rend_intergenic: 232142  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 233989, rend_intergenic: 232335  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 258232, rend_intergenic: 254221  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 273377, rend_intergenic: 258726  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 275705
-exon list size: 1237


building trellis

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34.1    
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35.2    
35.3    
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35.5    
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37.0    
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37.3    
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39.1    
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40.0    
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41.2    
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42.1    
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42.3    
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43.2    
43.3    
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43.7    
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44.0    
44.1    
44.1    
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44.3    
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44.5    
44.6    
44.6    
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44.8    
44.9    
45.0    
45.0    
45.1    
45.2    
45.3    
45.4    
45.4    
45.5    
45.6    
45.7    
45.8    
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46.0    
46.1    
46.2    
46.2    
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47.0    
47.1    
47.1    
47.2    
47.3    
47.4    
47.5    
47.5    
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47.8    
47.9    
47.9    
48.0    
48.1    
48.2    
48.3    
48.3    
48.4    
48.5    
48.6    
48.7    
48.7    
48.8    
48.9    
49.0    
49.1    
49.2    
49.2    
49.3    
49.4    
49.5    
49.6    
49.6    
49.7    
49.8    
49.9    
50.0    
50.0    
50.1    
50.2    
50.3    
50.4    
50.4    
50.5    
50.6    
50.7    
50.8    
50.8    
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51.0    
51.1    
51.2    
51.3    
51.3    
51.4    
51.5    
51.6    
51.7    
51.7    
51.8    
51.9    
52.0    
52.1    
52.1    
52.2    
52.3    
52.4    
52.5    
52.5    
52.6    
52.7    
52.8    
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52.9    
53.0    
53.1    
53.2    
53.3    
53.3    
53.4    
53.5    
53.6    
53.7    
53.8    
53.8    
53.9    
54.0    
54.1    
54.2    
54.2    
54.3    
54.4    
54.5    
54.6    
54.6    
54.7    
54.8    
54.9    
55.0    
55.0    
55.1    
55.2    
55.3    
55.4    
55.4    
55.5    
55.6    
55.7    
55.8    
55.9    
55.9    
56.0    
56.1    
56.2    
56.3    
56.3    
56.4    
56.5    
56.6    
56.7    
56.7    
56.8    
56.9    
57.0    
57.1    
57.1    
57.2    
57.3    
57.4    
57.5    
57.5    
57.6    
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57.9    
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58.2    
58.3    
58.4    
58.4    
58.5    
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58.8    
58.9    
59.0    
59.1    
59.2    
59.2    
59.3    
59.4    
59.5    
59.6    
59.6    
59.7    
59.8    
59.9    
60.0    
60.0    
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60.2    
60.3    
60.4    
60.5    
60.5    
60.6    
60.7    
60.8    
60.9    
60.9    
61.0    
61.1    
61.2    
61.3    
61.3    
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61.5    
61.6    
61.7    
61.7    
61.8    
61.9    
62.0    
62.1    
62.1    
62.2    
62.3    
62.4    
62.5    
62.6    
62.6    
62.7    
62.8    
62.9    
63.0    
63.0    
63.1    
63.2    
63.3    
63.4    
63.4    
63.5    
63.6    
63.7    
63.8    
63.8    
63.9    
64.0    
64.1    
64.2    
64.2    
64.3    
64.4    
64.5    
64.6    
64.6    
64.7    
64.8    
64.9    
65.0    
65.1    
65.1    
65.2    
65.3    
65.4    
65.5    
65.5    
65.6    
65.7    
65.8    
65.9    
65.9    
66.0    
66.1    
66.2    
66.3    
66.3    
66.4    
66.5    
66.6    
66.7    
66.7    
66.8    
66.9    
67.0    
67.1    
67.2    
67.2    
67.3    
67.4    
67.5    
67.6    
67.6    
67.7    
67.8    
67.9    
68.0    
68.0    
68.1    
68.2    
68.3    
68.4    
68.4    
68.5    
68.6    
68.7    
68.8    
68.8    
68.9    
69.0    
69.1    
69.2    
69.2    
69.3    
69.4    
69.5    
69.6    
69.7    
69.7    
69.8    
69.9    
70.0    
70.1    
70.1    
70.2    
70.3    
70.4    
70.5    
70.5    
70.6    
70.7    
70.8    
70.9    
70.9    
71.0    
71.1    
71.2    
71.3    
71.3    
71.4    
71.5    
71.6    
71.7    
71.8    
71.8    
71.9    
72.0    
72.1    
72.2    
72.2    
72.3    
72.4    
72.5    
72.6    
72.6    
72.7    
72.8    
72.9    
73.0    
73.0    
73.1    
73.2    
73.3    
73.4    
73.4    
73.5    
73.6    
73.7    
73.8    
73.8    
73.9    
74.0    
74.1    
74.2    
74.3    
74.3    
74.4    
74.5    
74.6    
74.7    
74.7    
74.8    
74.9    
75.0    
75.1    
75.1    
75.2    
75.3    
75.4    
75.5    
75.5    
75.6    
75.7    
75.8    
75.9    
75.9    
76.0    
76.1    
76.2    
76.3    
76.4    
76.4    
76.5    
76.6    
76.7    
76.8    
76.8    
76.9    
77.0    
77.1    
77.2    
77.2    
77.3    
77.4    
77.5    
77.6    
77.6    
77.7    
77.8    
77.9    
78.0    
78.0    
78.1    
78.2    
78.3    
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78.5    
78.5    
78.6    
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78.8    
78.9    
78.9    
79.0    
79.1    
79.2    
79.3    
79.3    
79.4    
79.5    
79.6    
79.7    
79.7    
79.8    
79.9    
80.0    
80.1    
80.1    
80.2    
80.3    
80.4    
80.5    
80.5    
80.6    
80.7    
80.8    
80.9    
81.0    
81.0    
81.1    
81.2    
81.3    
81.4    
81.4    
81.5    
81.6    
81.7    
81.8    
81.8    
81.9    
82.0    
82.1    
82.2    
82.2    
82.3    
82.4    
82.5    
82.6    
82.6    
82.7    
82.8    
82.9    
83.0    
83.1    
83.1    
83.2    
83.3    
83.4    
83.5    
83.5    
83.6    
83.7    
83.8    
83.9    
83.9    
84.0    
84.1    
84.2    
84.3    
84.3    
84.4    
84.5    
84.6    
84.7    
84.7    
84.8    
84.9    
85.0    
85.1    
85.1    
85.2    
85.3    
85.4    
85.5    
85.6    
85.6    
85.7    
85.8    
85.9    
86.0    
86.0    
86.1    
86.2    
86.3    
86.4    
86.4    
86.5    
86.6    
86.7    
86.8    
86.8    
86.9    
87.0    
87.1    
87.2    
87.2    
87.3    
87.4    
87.5    
87.6    
87.7    
87.7    
87.8    
87.9    
88.0    
88.1    
88.1    
88.2    
88.3    
88.4    
88.5    
88.5    
88.6    
88.7    
88.8    
88.9    
88.9    
89.0    
89.1    
89.2    
89.3    
89.3    
89.4    
89.5    
89.6    
89.7    
89.7    
89.8    
89.9    
90.0    
90.1    
90.2    
90.2    
90.3    
90.4    
90.5    
90.6    
90.6    
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90.8    
90.9    
91.0    
91.0    
91.1    
91.2    
91.3    
91.4    
91.4    
91.5    
91.6    
91.7    
91.8    
91.8    
91.9    
92.0    
92.1    
92.2    
92.3    
92.3    
92.4    
92.5    
92.6    
92.7    
92.7    
92.8    
92.9    
93.0    
93.1    
93.1    
93.2    
93.3    
93.4    
93.5    
93.5    
93.6    
93.7    
93.8    
93.9    
93.9    
94.0    
94.1    
94.2    
94.3    
94.4    
94.4    
94.5    
94.6    
94.7    
94.8    
94.8    
94.9    
95.0    
95.1    
95.2    
95.2    
95.3    
95.4    
95.5    
95.6    
95.6    
95.7    
95.8    
95.9    
96.0    
96.0    
96.1    
96.2    
96.3    
96.4    
96.4    
96.5    
96.6    
96.7    
96.8    
96.9    
96.9    
97.0    
97.1    
97.2    
97.3    
97.3    
97.4    
97.5    
97.6    
97.7    
97.7    
97.8    
97.9    
98.0    
98.1    
98.1    
98.2    
98.3    
98.4    
98.5    
98.5    
98.6    
98.7    
98.8    
98.9    
99.0    
99.0    
99.1    
99.2    
99.3    
99.4    
99.4    
99.5    
99.6    
99.7    
99.8    
99.8    
99.9    
-found 46 predictions from path traversal
Error with prediction: snap lend_intergenic: 14215, rend_intergenic: 2840  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 18027, rend_intergenic: 15684  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 31208, rend_intergenic: 28935  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 35631, rend_intergenic: 31423  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 40629, rend_intergenic: 38635  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 44747, rend_intergenic: 41071  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 45470, rend_intergenic: 44782  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 53887, rend_intergenic: 50848  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 54776, rend_intergenic: 54419  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 57696, rend_intergenic: 55294  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 61894, rend_intergenic: 58072  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 72370, rend_intergenic: 64129  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 110369, rend_intergenic: 73137  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 124497, rend_intergenic: 111607  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 129492, rend_intergenic: 125948  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 143165, rend_intergenic: 130078  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 147017, rend_intergenic: 143170  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 184597, rend_intergenic: 177582  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 188567, rend_intergenic: 185114  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 196851, rend_intergenic: 189519  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 207824, rend_intergenic: 197630  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 214865, rend_intergenic: 208204  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 216379, rend_intergenic: 215982  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 219209, rend_intergenic: 216534  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 226237, rend_intergenic: 221006  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 231340, rend_intergenic: 226492  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 232332, rend_intergenic: 232142  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 233989, rend_intergenic: 232335  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 258232, rend_intergenic: 254221  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 273377, rend_intergenic: 258726  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 32 predictions persist after filtering for low support