-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_11/scaffold_11_1997402-2200753

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for snap_scaffold_11-snap.522-T1
Valid prediction for GlimmerHMM_glimmerT_27151-T1
Valid prediction for GeneMark_model.46875_t
Valid prediction for snap_scaffold_11-snap.516-T1
Valid prediction for GlimmerHMM_glimmerT_27139-T1
Valid prediction for GlimmerHMM_glimmerT_27154-T1
Valid prediction for GlimmerHMM_glimmerT_27162-T1
Valid prediction for GlimmerHMM_glimmerT_27136-T1
Valid prediction for GeneMark_model.46870_t
Valid prediction for GlimmerHMM_glimmerT_27149-T1
Valid prediction for GeneMark_model.46880_t
Valid prediction for GeneMark_model.46867_t
Valid prediction for snap_scaffold_11-snap.525-T1
Valid prediction for pasa_asmbl_5313.p1
Valid prediction for GeneMark_model.46887_t
Couldn't classify 72659, 72672
Sorry, prediction pasa_asmbl_5315.p1 fails validation.
(ATC)	 AG	72659-72672	GT	AAG
(GAT)	 AG	72754-72916	GT	CTG
(GAG)	 AG	73017-73196	GT	AGG
(CTG)	 AG	73275-73371	GT	AGG
(GCG)	 AG	73465-73629	GT	AGG
(AGG)	 AG	74358-74509	GT	CAG
(ACC)	 AG	74899-74992	GT	CTG
(CTC)	 AG	75520-75763	GT	AGG
(GTT)	 AG	75991-76153	GT	AGG
(CTG)	 AG	76255-76347	GT	AGG
(GGC)	 AG	76627-76815	GT	TGG
(CAC)	 AG	76987-77260	GT	CGG
(GGA)	 AG	77380-77491	GT	AGG
(GGT)	 AG	78155-78359	GT	AGG
(ATG)	 AG	78519-78661	GT	AGG
(GAT)	 AG	78758-78915	GT	GGG
(AGG)	 AG	79609-79784	GT	AGG
(AAG)	 AG	80348-80498	GT	AGG
(GAC)	 AG	80622-80821	GT	AGG
(GAG)	 AG	80931-81011	GC	AGG
(ATC)	 AG	81216-81322	GT	AGG
(GCC)	 AG	81480-81572	GT	CGG
(GAT)	 AG	81653-81723	GT	AGG
(ACT)	 AG	81840-81916	GT	TGG
(ACT)	 AG	82013-82183	GT	AGG
(CCG)	 AG	82566-82698	GT	CGG
(GTC)	 AG	82955-83154	GT	AGG
(GAC)	 AG	83797-84026	GT	GGG
(GTG)	 AG	84407-84524	GT	AGG
(GTG)	 AG	84670-84864	GT	TGG
(CTG)	 AG	84990-85091	GT	AGG
(GAT)	 AG	85173-85251	GT	AGG
(CCC)	 AG	85920-86130	GT	AGG
(AGA)	 AG	86374-86443	GT	AGG
(GGA)	 AG	86623-86705	GT	GGG
(GTT)	 AG	86857-86978	GT	AGG
(TCC)	 AG	87926-88080	GT	AGG
(GCA)	 AG	88194-88343	GT	AGG
(GGG)	 AG	88580-88810	CC	GAC
-recovered pasa_asmbl_5315.p1, initial, 78519, 78661
add_exon() Sorry, pasa_asmbl_5315.p1 86857-86978-terminal-2 is invalid.
-recovered pasa_asmbl_5315.p1, terminal, 86857, 86978
-recovered pasa_asmbl_5315.p1, terminal, 88580, 88810
-recovered pasa_asmbl_5315.p1, internal, 72659, 72672
-recovered pasa_asmbl_5315.p1, internal, 72754, 72916
-recovered pasa_asmbl_5315.p1, internal, 73017, 73196
-recovered pasa_asmbl_5315.p1, internal, 73275, 73371
-recovered pasa_asmbl_5315.p1, internal, 73465, 73629
-recovered pasa_asmbl_5315.p1, internal, 74358, 74509
-recovered pasa_asmbl_5315.p1, internal, 74899, 74992
-recovered pasa_asmbl_5315.p1, internal, 75520, 75763
-recovered pasa_asmbl_5315.p1, internal, 75991, 76153
-recovered pasa_asmbl_5315.p1, internal, 76255, 76347
-recovered pasa_asmbl_5315.p1, internal, 76627, 76815
-recovered pasa_asmbl_5315.p1, internal, 76987, 77260
-recovered pasa_asmbl_5315.p1, internal, 77380, 77491
-recovered pasa_asmbl_5315.p1, internal, 78155, 78359
-recovered pasa_asmbl_5315.p1, internal, 78519, 78661
-recovered pasa_asmbl_5315.p1, internal, 78758, 78915
-recovered pasa_asmbl_5315.p1, internal, 79609, 79784
-recovered pasa_asmbl_5315.p1, internal, 80348, 80498
-recovered pasa_asmbl_5315.p1, internal, 80622, 80821
-recovered pasa_asmbl_5315.p1, internal, 80931, 81011
-recovered pasa_asmbl_5315.p1, internal, 81216, 81322
-recovered pasa_asmbl_5315.p1, internal, 81480, 81572
-recovered pasa_asmbl_5315.p1, internal, 81653, 81723
-recovered pasa_asmbl_5315.p1, internal, 81840, 81916
-recovered pasa_asmbl_5315.p1, internal, 82013, 82183
-recovered pasa_asmbl_5315.p1, internal, 82566, 82698
-recovered pasa_asmbl_5315.p1, internal, 82955, 83154
-recovered pasa_asmbl_5315.p1, internal, 83797, 84026
-recovered pasa_asmbl_5315.p1, internal, 84407, 84524
-recovered pasa_asmbl_5315.p1, internal, 84670, 84864
-recovered pasa_asmbl_5315.p1, internal, 84990, 85091
-recovered pasa_asmbl_5315.p1, internal, 85173, 85251
-recovered pasa_asmbl_5315.p1, internal, 85920, 86130
-recovered pasa_asmbl_5315.p1, internal, 86374, 86443
-recovered pasa_asmbl_5315.p1, internal, 86623, 86705
-recovered pasa_asmbl_5315.p1, internal, 86857, 86978
-recovered pasa_asmbl_5315.p1, internal, 87926, 88080
-recovered pasa_asmbl_5315.p1, internal, 88194, 88343
Valid prediction for GeneMark_model.46890_t
Valid prediction for Augustus_model.g18136.t1
Valid prediction for snap_scaffold_11-snap.537-T1
Valid prediction for snap_scaffold_11-snap.530-T1
Valid prediction for snap_scaffold_11-snap.535-T1
Valid prediction for GlimmerHMM_glimmerT_27163-T1
Valid prediction for snap_scaffold_11-snap.514-T1
Valid prediction for CodingQuarry_transcript_7952-T1
Valid prediction for GlimmerHMM_glimmerT_27147-T1
Valid prediction for GlimmerHMM_glimmerT_27144-T1
Valid prediction for GlimmerHMM_glimmerT_27153-T1
Valid prediction for GeneMark_model.46850_t
Valid prediction for snap_scaffold_11-snap.543-T1
Valid prediction for GeneMark_model.46876_t
Valid prediction for GeneMark_model.46889_t
Valid prediction for GeneMark_model.46882_t
Valid prediction for HiQ_model.g18137.t1
Valid prediction for GeneMark_model.46862_t
Valid prediction for Augustus_model.g18141.t1
Valid prediction for Augustus_model.g18132.t1
Valid prediction for HiQ_model.g18129.t1
Valid prediction for GeneMark_model.46865_t
Valid prediction for snap_scaffold_11-snap.540-T1
Valid prediction for GlimmerHMM_glimmerT_27145-T1
Valid prediction for HiQ_model.g18127.t1
Valid prediction for GeneMark_model.46878_t
Valid prediction for GlimmerHMM_glimmerT_27133-T1
Valid prediction for Augustus_model.g18121.t1
Valid prediction for GeneMark_model.46858_t
Valid prediction for GeneMark_model.46855_t
Valid prediction for snap_scaffold_11-snap.544-T1
Valid prediction for GeneMark_model.46872_t
Valid prediction for snap_scaffold_11-snap.510-T1
Valid prediction for GeneMark_model.46885_t
Valid prediction for snap_scaffold_11-snap.518-T1
Valid prediction for snap_scaffold_11-snap.527-T1
Valid prediction for Augustus_model.g18142.t1
Valid prediction for snap_scaffold_11-snap.531-T1
Valid prediction for GeneMark_model.46863_t
Valid prediction for GeneMark_model.46873_t
Couldn't classify 108116, 108238
Sorry, prediction CodingQuarry_transcript_7957-T1 fails validation.
(ATG)	 TC	104641-104679	GT	GGG
(ACA)	 AG	105186-105227	GT	TGG
(CCT)	 AG	105344-105418	GT	CTG
(GCC)	 AG	106226-106387	GT	TTG
(AAA)	 AG	106687-106765	GT	GCG
(AGG)	 AG	107220-107521	GT	ATG
(GCT)	 CA	108116-108238	GT	TGG
(GGA)	 AG	108596-108785	GT	AGG
(GGG)	 AG	109537-109718	GT	CCG
(CCC)	 AG	109875-110054	GT	AGG
(ATC)	 AG	111018-111116	GT	AAG
(GGT)	 AG	111586-111690	AC	AGA
-recovered CodingQuarry_transcript_7957-T1, initial, 104641, 104679
-recovered CodingQuarry_transcript_7957-T1, terminal, 111586, 111690
-recovered CodingQuarry_transcript_7957-T1, internal, 105186, 105227
-recovered CodingQuarry_transcript_7957-T1, internal, 105344, 105418
-recovered CodingQuarry_transcript_7957-T1, internal, 106226, 106387
-recovered CodingQuarry_transcript_7957-T1, internal, 106687, 106765
-recovered CodingQuarry_transcript_7957-T1, internal, 107220, 107521
-recovered CodingQuarry_transcript_7957-T1, internal, 108596, 108785
-recovered CodingQuarry_transcript_7957-T1, internal, 109537, 109718
-recovered CodingQuarry_transcript_7957-T1, internal, 109875, 110054
-recovered CodingQuarry_transcript_7957-T1, internal, 111018, 111116
Valid prediction for snap_scaffold_11-snap.538-T1
Valid prediction for Augustus_model.g18123.t1
Valid prediction for GlimmerHMM_glimmerT_27161-T1
Valid prediction for snap_scaffold_11-snap.541-T1
Valid prediction for GlimmerHMM_glimmerT_27146-T1
Valid prediction for HiQ_model.g18125.t1
Valid prediction for GlimmerHMM_glimmerT_27140-T1
Valid prediction for snap_scaffold_11-snap.549-T1
Valid prediction for CodingQuarry_transcript_7959-T1
Couldn't classify 146370, 146539
Sorry, prediction pasa_asmbl_5324.p1 fails validation.
(AGG)	 AC	146370-146539	GT	AGG
(GGA)	 AG	146631-146730	GT	AGG
(AGA)	 AG	146847-147013	GT	AGG
(GGA)	 AG	147271-147346	AA	AGA
-recovered pasa_asmbl_5324.p1, terminal, 147271, 147346
-recovered pasa_asmbl_5324.p1, internal, 146631, 146730
-recovered pasa_asmbl_5324.p1, internal, 146847, 147013
Valid prediction for GlimmerHMM_glimmerT_27158-T1
Valid prediction for GeneMark_model.46857_t
Valid prediction for GeneMark_model.46848_t
Valid prediction for GeneMark_model.46846_t
Valid prediction for Augustus_model.g18130.t1
Valid prediction for snap_scaffold_11-snap.550-T1
Valid prediction for snap_scaffold_11-snap.536-T1
Valid prediction for snap_scaffold_11-snap.509-T1
Valid prediction for pasa_asmbl_5319.p1
Valid prediction for GlimmerHMM_glimmerT_27142-T1
Valid prediction for snap_scaffold_11-snap.504-T1
Valid prediction for GlimmerHMM_glimmerT_27155-T1
Valid prediction for GeneMark_model.46884_t
Valid prediction for snap_scaffold_11-snap.548-T1
Valid prediction for CodingQuarry_transcript_7954-T1
Valid prediction for Augustus_model.g18128.t1
Valid prediction for Augustus_model.g18134.t1
Valid prediction for GeneMark_model.46860_t
Valid prediction for snap_scaffold_11-snap.521-T1
Valid prediction for snap_scaffold_11-snap.545-T1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for GeneMark_model.46879_t
Valid prediction for GeneMark_model.46881_t
Valid prediction for pasa_asmbl_6451.p1
Valid prediction for Augustus_model.g18140.t1
Valid prediction for CodingQuarry_transcript_7953-T1
Valid prediction for snap_scaffold_11-snap.532-T1
Valid prediction for GeneMark_model.46877_t
Valid prediction for GeneMark_model.46853_t
Valid prediction for GlimmerHMM_glimmerT_27132-T1
Valid prediction for GeneMark_model.46891_t
Valid prediction for snap_scaffold_11-snap.512-T1
Valid prediction for GeneMark_model.46886_t
Valid prediction for snap_scaffold_11-snap.505-T1
Valid prediction for GlimmerHMM_glimmerT_27160-T1
Valid prediction for GlimmerHMM_glimmerT_27156-T1
Valid prediction for GeneMark_model.46852_t
Valid prediction for GeneMark_model.46883_t
Valid prediction for GlimmerHMM_glimmerT_27150-T1
Valid prediction for snap_scaffold_11-snap.511-T1
Valid prediction for snap_scaffold_11-snap.534-T1
Valid prediction for HiQ_model.g18135.t1
Valid prediction for GeneMark_model.46854_t
Valid prediction for snap_scaffold_11-snap.508-T1
Valid prediction for snap_scaffold_11-snap.533-T1
Valid prediction for CodingQuarry_transcript_7951-T1
Valid prediction for GlimmerHMM_glimmerT_27134-T1
Valid prediction for snap_scaffold_11-snap.526-T1
Valid prediction for CodingQuarry_transcript_7958-T1
Valid prediction for GlimmerHMM_glimmerT_27131-T1
Valid prediction for HiQ_model.g18126.t1
Valid prediction for snap_scaffold_11-snap.517-T1
Valid prediction for HiQ_model.g18124.t1
Valid prediction for snap_scaffold_11-snap.529-T1
Valid prediction for snap_scaffold_11-snap.539-T1
Valid prediction for CodingQuarry_transcript_7956-T1
Valid prediction for GeneMark_model.46888_t
Valid prediction for snap_scaffold_11-snap.547-T1
Valid prediction for snap_scaffold_11-snap.515-T1
Valid prediction for CodingQuarry_transcript_7955-T1
Valid prediction for snap_scaffold_11-snap.546-T1
Valid prediction for GlimmerHMM_glimmerT_27157-T1
Valid prediction for GlimmerHMM_glimmerT_27135-T1
Valid prediction for Augustus_model.g18120.t1
Couldn't classify 86595, 86639
Sorry, prediction pasa_asmbl_6454.p1 fails validation.
(AAG)	 AC	86595-86639	GT	AGG
(GTC)	 AG	86846-86916	GT	GTG
(GCA)	 AG	87509-87653	GT	AGG
(GAA)	 AG	90050-90145	GT	GGG
(AAT)	 AG	90894-90941	GA	GAG
-recovered pasa_asmbl_6454.p1, terminal, 90894, 90941
-recovered pasa_asmbl_6454.p1, internal, 86846, 86916
-recovered pasa_asmbl_6454.p1, internal, 87509, 87653
-recovered pasa_asmbl_6454.p1, internal, 90050, 90145
Valid prediction for snap_scaffold_11-snap.507-T1
Valid prediction for snap_scaffold_11-snap.524-T1
Valid prediction for GeneMark_model.46845_t
Valid prediction for Augustus_model.g18131.t1
Valid prediction for GlimmerHMM_glimmerT_27159-T1
Valid prediction for GlimmerHMM_glimmerT_27148-T1
Valid prediction for GlimmerHMM_glimmerT_27152-T1
Valid prediction for snap_scaffold_11-snap.506-T1
Valid prediction for GeneMark_model.46859_t
Valid prediction for pasa_asmbl_6449.p1
Valid prediction for GeneMark_model.46869_t
Valid prediction for GlimmerHMM_glimmerT_27138-T1
Valid prediction for GeneMark_model.46864_t
Valid prediction for GeneMark_model.46874_t
Valid prediction for GlimmerHMM_glimmerT_27141-T1
Valid prediction for GeneMark_model.46856_t
Valid prediction for snap_scaffold_11-snap.542-T1
Valid prediction for Augustus_model.g18139.t1
Valid prediction for snap_scaffold_11-snap.523-T1
Valid prediction for snap_scaffold_11-snap.528-T1
Couldn't classify 202109, 202150
Sorry, prediction pasa_asmbl_6446.p1 fails validation.
(ATG)	 AA	200141-200332	GT	AGG
(GAC)	 AG	200651-200828	GT	TGG
(GGG)	 AG	200938-200993	GT	AGG
(GTT)	 AG	201182-201252	GT	AGG
(GGA)	 AG	201377-201482	GT	CGG
(TGT)	 AG	201566-201697	GT	CGG
(AAT)	 AG	201895-202005	GT	AGG
(GAT)	 AG	202109-202150	CC	AGC
-recovered pasa_asmbl_6446.p1, initial, 200141, 200332
-recovered pasa_asmbl_6446.p1, internal, 200651, 200828
-recovered pasa_asmbl_6446.p1, internal, 200938, 200993
-recovered pasa_asmbl_6446.p1, internal, 201182, 201252
-recovered pasa_asmbl_6446.p1, internal, 201377, 201482
-recovered pasa_asmbl_6446.p1, internal, 201566, 201697
-recovered pasa_asmbl_6446.p1, internal, 201895, 202005
Valid prediction for snap_scaffold_11-snap.513-T1
Valid prediction for GlimmerHMM_glimmerT_27143-T1
Valid prediction for GeneMark_model.46871_t
Valid prediction for GeneMark_model.46861_t
Valid prediction for snap_scaffold_11-snap.520-T1
Valid prediction for pasa_asmbl_6457.p1
Valid prediction for snap_scaffold_11-snap.503-T1
Valid prediction for snap_scaffold_11-snap.502-T1
Valid prediction for GeneMark_model.46847_t
Valid prediction for Augustus_model.g18138.t1
Valid prediction for snap_scaffold_11-snap.519-T1
Valid prediction for GeneMark_model.46866_t
Valid prediction for Augustus_model.g18133.t1
Valid prediction for Augustus_model.g18122.t1
Valid prediction for GlimmerHMM_glimmerT_27137-T1
Valid prediction for GeneMark_model.46849_t

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 15580, rend_intergenic: 13149  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 38714, rend_intergenic: 17315  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 43115, rend_intergenic: 39638  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 50377, rend_intergenic: 43903  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 54111, rend_intergenic: 51477  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 88810, rend_intergenic: 78557  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 101117, rend_intergenic: 98053  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 107904, rend_intergenic: 106675  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 110160, rend_intergenic: 107985  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 132504, rend_intergenic: 126006  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 164019, rend_intergenic: 163729  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 174164, rend_intergenic: 164284  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 188349, rend_intergenic: 178486  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 194895, rend_intergenic: 191801  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 203352
-exon list size: 924


building trellis

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22.0    
22.1    
22.2    
22.4    
22.5    
22.6    
22.7    
22.8    
22.9    
23.0    
23.1    
23.2    
23.3    
23.4    
23.5    
23.7    
23.8    
23.9    
24.0    
24.1    
24.2    
24.3    
24.4    
24.5    
24.6    
24.7    
24.8    
24.9    
25.1    
25.2    
25.3    
25.4    
25.5    
25.6    
25.7    
25.8    
25.9    
26.0    
26.1    
26.2    
26.3    
26.5    
26.6    
26.7    
26.8    
26.9    
27.0    
27.1    
27.2    
27.3    
27.4    
27.5    
27.6    
27.8    
27.9    
28.0    
28.1    
28.2    
28.3    
28.4    
28.5    
28.6    
28.7    
28.8    
28.9    
29.0    
29.2    
29.3    
29.4    
29.5    
29.6    
29.7    
29.8    
29.9    
30.0    
30.1    
30.2    
30.3    
30.5    
30.6    
30.7    
30.8    
30.9    
31.0    
31.1    
31.2    
31.3    
31.4    
31.5    
31.6    
31.7    
31.9    
32.0    
32.1    
32.2    
32.3    
32.4    
32.5    
32.6    
32.7    
32.8    
32.9    
33.0    
33.2    
33.3    
33.4    
33.5    
33.6    
33.7    
33.8    
33.9    
34.0    
34.1    
34.2    
34.3    
34.4    
34.6    
34.7    
34.8    
34.9    
35.0    
35.1    
35.2    
35.3    
35.4    
35.5    
35.6    
35.7    
35.9    
36.0    
36.1    
36.2    
36.3    
36.4    
36.5    
36.6    
36.7    
36.8    
36.9    
37.0    
37.1    
37.3    
37.4    
37.5    
37.6    
37.7    
37.8    
37.9    
38.0    
38.1    
38.2    
38.3    
38.4    
38.6    
38.7    
38.8    
38.9    
39.0    
39.1    
39.2    
39.3    
39.4    
39.5    
39.6    
39.7    
39.8    
40.0    
40.1    
40.2    
40.3    
40.4    
40.5    
40.6    
40.7    
40.8    
40.9    
41.0    
41.1    
41.3    
41.4    
41.5    
41.6    
41.7    
41.8    
41.9    
42.0    
42.1    
42.2    
42.3    
42.4    
42.5    
42.7    
42.8    
42.9    
43.0    
43.1    
43.2    
43.3    
43.4    
43.5    
43.6    
43.7    
43.8    
44.0    
44.1    
44.2    
44.3    
44.4    
44.5    
44.6    
44.7    
44.8    
44.9    
45.0    
45.1    
45.2    
45.4    
45.5    
45.6    
45.7    
45.8    
45.9    
46.0    
46.1    
46.2    
46.3    
46.4    
46.5    
46.7    
46.8    
46.9    
47.0    
47.1    
47.2    
47.3    
47.4    
47.5    
47.6    
47.7    
47.8    
47.9    
48.1    
48.2    
48.3    
48.4    
48.5    
48.6    
48.7    
48.8    
48.9    
49.0    
49.1    
49.2    
49.4    
49.5    
49.6    
49.7    
49.8    
49.9    
50.0    
50.1    
50.2    
50.3    
50.4    
50.5    
50.6    
50.8    
50.9    
51.0    
51.1    
51.2    
51.3    
51.4    
51.5    
51.6    
51.7    
51.8    
51.9    
52.1    
52.2    
52.3    
52.4    
52.5    
52.6    
52.7    
52.8    
52.9    
53.0    
53.1    
53.2    
53.3    
53.5    
53.6    
53.7    
53.8    
53.9    
54.0    
54.1    
54.2    
54.3    
54.4    
54.5    
54.6    
54.8    
54.9    
55.0    
55.1    
55.2    
55.3    
55.4    
55.5    
55.6    
55.7    
55.8    
55.9    
56.0    
56.2    
56.3    
56.4    
56.5    
56.6    
56.7    
56.8    
56.9    
57.0    
57.1    
57.2    
57.3    
57.5    
57.6    
57.7    
57.8    
57.9    
58.0    
58.1    
58.2    
58.3    
58.4    
58.5    
58.6    
58.7    
58.9    
59.0    
59.1    
59.2    
59.3    
59.4    
59.5    
59.6    
59.7    
59.8    
59.9    
60.0    
60.2    
60.3    
60.4    
60.5    
60.6    
60.7    
60.8    
60.9    
61.0    
61.1    
61.2    
61.3    
61.4    
61.6    
61.7    
61.8    
61.9    
62.0    
62.1    
62.2    
62.3    
62.4    
62.5    
62.6    
62.7    
62.9    
63.0    
63.1    
63.2    
63.3    
63.4    
63.5    
63.6    
63.7    
63.8    
63.9    
64.0    
64.1    
64.3    
64.4    
64.5    
64.6    
64.7    
64.8    
64.9    
65.0    
65.1    
65.2    
65.3    
65.4    
65.6    
65.7    
65.8    
65.9    
66.0    
66.1    
66.2    
66.3    
66.4    
66.5    
66.6    
66.7    
66.8    
67.0    
67.1    
67.2    
67.3    
67.4    
67.5    
67.6    
67.7    
67.8    
67.9    
68.0    
68.1    
68.3    
68.4    
68.5    
68.6    
68.7    
68.8    
68.9    
69.0    
69.1    
69.2    
69.3    
69.4    
69.5    
69.7    
69.8    
69.9    
70.0    
70.1    
70.2    
70.3    
70.4    
70.5    
70.6    
70.7    
70.8    
71.0    
71.1    
71.2    
71.3    
71.4    
71.5    
71.6    
71.7    
71.8    
71.9    
72.0    
72.1    
72.2    
72.4    
72.5    
72.6    
72.7    
72.8    
72.9    
73.0    
73.1    
73.2    
73.3    
73.4    
73.5    
73.7    
73.8    
73.9    
74.0    
74.1    
74.2    
74.3    
74.4    
74.5    
74.6    
74.7    
74.8    
74.9    
75.1    
75.2    
75.3    
75.4    
75.5    
75.6    
75.7    
75.8    
75.9    
76.0    
76.1    
76.2    
76.3    
76.5    
76.6    
76.7    
76.8    
76.9    
77.0    
77.1    
77.2    
77.3    
77.4    
77.5    
77.6    
77.8    
77.9    
78.0    
78.1    
78.2    
78.3    
78.4    
78.5    
78.6    
78.7    
78.8    
78.9    
79.0    
79.2    
79.3    
79.4    
79.5    
79.6    
79.7    
79.8    
79.9    
80.0    
80.1    
80.2    
80.3    
80.5    
80.6    
80.7    
80.8    
80.9    
81.0    
81.1    
81.2    
81.3    
81.4    
81.5    
81.6    
81.7    
81.9    
82.0    
82.1    
82.2    
82.3    
82.4    
82.5    
82.6    
82.7    
82.8    
82.9    
83.0    
83.2    
83.3    
83.4    
83.5    
83.6    
83.7    
83.8    
83.9    
84.0    
84.1    
84.2    
84.3    
84.4    
84.6    
84.7    
84.8    
84.9    
85.0    
85.1    
85.2    
85.3    
85.4    
85.5    
85.6    
85.7    
85.9    
86.0    
86.1    
86.2    
86.3    
86.4    
86.5    
86.6    
86.7    
86.8    
86.9    
87.0    
87.1    
87.3    
87.4    
87.5    
87.6    
87.7    
87.8    
87.9    
88.0    
88.1    
88.2    
88.3    
88.4    
88.6    
88.7    
88.8    
88.9    
89.0    
89.1    
89.2    
89.3    
89.4    
89.5    
89.6    
89.7    
89.8    
90.0    
90.1    
90.2    
90.3    
90.4    
90.5    
90.6    
90.7    
90.8    
90.9    
91.0    
91.1    
91.3    
91.4    
91.5    
91.6    
91.7    
91.8    
91.9    
92.0    
92.1    
92.2    
92.3    
92.4    
92.5    
92.7    
92.8    
92.9    
93.0    
93.1    
93.2    
93.3    
93.4    
93.5    
93.6    
93.7    
93.8    
94.0    
94.1    
94.2    
94.3    
94.4    
94.5    
94.6    
94.7    
94.8    
94.9    
95.0    
95.1    
95.2    
95.4    
95.5    
95.6    
95.7    
95.8    
95.9    
96.0    
96.1    
96.2    
96.3    
96.4    
96.5    
96.7    
96.8    
96.9    
97.0    
97.1    
97.2    
97.3    
97.4    
97.5    
97.6    
97.7    
97.8    
97.9    
98.1    
98.2    
98.3    
98.4    
98.5    
98.6    
98.7    
98.8    
98.9    
99.0    
99.1    
99.2    
99.4    
99.5    
99.6    
99.7    
99.8    
99.9    
-found 33 predictions from path traversal
Error with prediction: snap lend_intergenic: 15580, rend_intergenic: 13149  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 38714, rend_intergenic: 17315  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 43115, rend_intergenic: 39638  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 50377, rend_intergenic: 43903  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 54111, rend_intergenic: 51477  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 88810, rend_intergenic: 78557  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 101117, rend_intergenic: 98053  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 107904, rend_intergenic: 106675  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 110160, rend_intergenic: 107985  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 132504, rend_intergenic: 126006  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 164019, rend_intergenic: 163729  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 174164, rend_intergenic: 164284  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 188349, rend_intergenic: 178486  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 194895, rend_intergenic: 191801  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 26 predictions persist after filtering for low support