-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_11/scaffold_11_13055303-13307373

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for snap_scaffold_11-snap.2824-T1
Valid prediction for GlimmerHMM_glimmerT_28736-T1
Valid prediction for GeneMark_model.49634_t
Valid prediction for GeneMark_model.49606_t
Valid prediction for GlimmerHMM_glimmerT_28742-T1
Valid prediction for GlimmerHMM_glimmerT_28729-T1
Valid prediction for snap_scaffold_11-snap.2816-T1
Valid prediction for snap_scaffold_11-snap.2825-T1
Valid prediction for GeneMark_model.49622_t
Valid prediction for CodingQuarry_transcript_8246-T1
Couldn't classify 191106, 191135
Sorry, prediction pasa_asmbl_6014.p1 fails validation.
(CCT)	 GC	191106-191135	GT	AGG
(GAT)	 AG	191571-191645	GT	GGG
(AAC)	 AG	191756-191881	GT	AGG
(GAG)	 AG	192202-192319	GT	AGG
(GTT)	 AG	192860-192954	GG	GAG
-recovered pasa_asmbl_6014.p1, terminal, 192860, 192954
-recovered pasa_asmbl_6014.p1, internal, 191571, 191645
-recovered pasa_asmbl_6014.p1, internal, 191756, 191881
-recovered pasa_asmbl_6014.p1, internal, 192202, 192319
Valid prediction for snap_scaffold_11-snap.2803-T1
Valid prediction for Augustus_model.g19190.t1
Valid prediction for Augustus_model.g19191.t1
Valid prediction for GeneMark_model.49618_t
Valid prediction for snap_scaffold_11-snap.2820-T1
Valid prediction for HiQ_model.g19168.t1
Valid prediction for Augustus_model.g19187.t1
Valid prediction for snap_scaffold_11-snap.2809-T1
Valid prediction for snap_scaffold_11-snap.2813-T1
Valid prediction for GeneMark_model.49614_t
Valid prediction for GeneMark_model.49616_t
Valid prediction for Augustus_model.g19171.t1
Valid prediction for Augustus_model.g19167.t1
Valid prediction for Augustus_model.g19181.t1
Valid prediction for snap_scaffold_11-snap.2801-T1
Valid prediction for snap_scaffold_11-snap.2835-T1
Valid prediction for Augustus_model.g19170.t1
Valid prediction for GeneMark_model.49589_t
Couldn't classify 244030, 244126
Sorry, prediction pasa_asmbl_6026.p1 fails validation.
(GAG)	 CA	244030-244126	GT	AGG
(AGG)	 AG	246301-246422	GT	GGG
(GAG)	 AG	246895-246929	GT	AGG
(ACT)	 AG	249684-249828	AA	GAA
-recovered pasa_asmbl_6026.p1, terminal, 249684, 249828
-recovered pasa_asmbl_6026.p1, internal, 246301, 246422
-recovered pasa_asmbl_6026.p1, internal, 246895, 246929
Valid prediction for GeneMark_model.49588_t
Valid prediction for snap_scaffold_11-snap.2799-T1
Valid prediction for GeneMark_model.49596_t
Valid prediction for GeneMark_model.49611_t
Valid prediction for snap_scaffold_11-snap.2802-T1
Valid prediction for GeneMark_model.49626_t
Valid prediction for GeneMark_model.49628_t
Valid prediction for GlimmerHMM_glimmerT_28744-T1
Valid prediction for GeneMark_model.49637_t
Valid prediction for snap_scaffold_11-snap.2840-T1
Valid prediction for GeneMark_model.49630_t
Valid prediction for GeneMark_model.49632_t
Couldn't classify 204175, 204176
Sorry, prediction CodingQuarry_transcript_8254-T1 fails validation.
(ATG)	 TC	204175-204176	GT	ATG
(GAT)	 AG	204266-204333	GT	AGG
(GCG)	 AG	204718-204810	GT	ACG
(ACA)	 AG	205500-205560	GT	GGG
(GGG)	 AG	205756-205801	TG	AGT
-recovered CodingQuarry_transcript_8254-T1, terminal, 205756, 205801
-recovered CodingQuarry_transcript_8254-T1, internal, 204266, 204333
-recovered CodingQuarry_transcript_8254-T1, internal, 204718, 204810
-recovered CodingQuarry_transcript_8254-T1, internal, 205500, 205560
Valid prediction for Augustus_model.g19192.t1
Valid prediction for snap_scaffold_11-snap.2831-T1
Valid prediction for GeneMark_model.49591_t
Valid prediction for GlimmerHMM_glimmerT_28730-T1
Valid prediction for GeneMark_model.49639_t
Valid prediction for pasa_asmbl_6000.p1
Valid prediction for Augustus_model.g19189.t1
Valid prediction for snap_scaffold_11-snap.2805-T1
Valid prediction for Augustus_model.g19180.t1
Valid prediction for GlimmerHMM_glimmerT_28745-T1
Valid prediction for snap_scaffold_11-snap.2830-T1
Valid prediction for GeneMark_model.49601_t
Valid prediction for GeneMark_model.49619_t
Valid prediction for snap_scaffold_11-snap.2815-T1
Valid prediction for GlimmerHMM_glimmerT_28741-T1
Valid prediction for GeneMark_model.49590_t
Valid prediction for snap_scaffold_11-snap.2842-T1
Valid prediction for snap_scaffold_11-snap.2838-T1
Valid prediction for CodingQuarry_transcript_8253-T1
Couldn't classify 191106, 191135
Sorry, prediction pasa_asmbl_6012.p1 fails validation.
(CCT)	 GC	191106-191135	GT	AGG
(GAT)	 AG	191571-191645	GT	GGG
(AAC)	 AG	191756-191881	GT	AGG
(GAG)	 AG	192202-192319	GT	AGG
(GTT)	 AG	192860-192950	GT	TGG
(CGG)	 AG	193663-193761	GT	CAG
(GAT)	 AG	194177-194342	GG	GAG
-recovered pasa_asmbl_6012.p1, terminal, 194177, 194342
-recovered pasa_asmbl_6012.p1, internal, 191571, 191645
-recovered pasa_asmbl_6012.p1, internal, 191756, 191881
-recovered pasa_asmbl_6012.p1, internal, 192202, 192319
-recovered pasa_asmbl_6012.p1, internal, 192860, 192950
-recovered pasa_asmbl_6012.p1, internal, 193663, 193761
Valid prediction for GlimmerHMM_glimmerT_28738-T1
Valid prediction for HiQ_model.g19169.t1
Valid prediction for snap_scaffold_11-snap.2822-T1
Valid prediction for GlimmerHMM_glimmerT_28747-T1
Valid prediction for HiQ_model.g19185.t1
Valid prediction for pasa_asmbl_6269.p1
Valid prediction for snap_scaffold_11-snap.2797-T1
Couldn't classify 29986, 30109
Sorry, prediction pasa_asmbl_5996.p1 fails validation.
(GAA)	 AG	29986-30109	GT	AGG
(CAA)	 AG	31002-31165	GT	AGG
(GCA)	 AG	31286-31381	GT	CAG
(TTA)	 AG	31614-31688	AG	AAA
-recovered pasa_asmbl_5996.p1, terminal, 31614, 31688
-recovered pasa_asmbl_5996.p1, internal, 29986, 30109
-recovered pasa_asmbl_5996.p1, internal, 31002, 31165
-recovered pasa_asmbl_5996.p1, internal, 31286, 31381
Couldn't classify 236539, 236679
Couldn't classify 240480, 240551
Sorry, prediction pasa_asmbl_6229.p1 fails validation.
(CTG)	 AG	236539-236679	GT	CCG
(GCC)	 AG	237879-237991	GT	AGG
(GAT)	 AG	239495-239609	GT	TGG
(GCC)	 AG	240480-240551	GG	AAG
-recovered pasa_asmbl_6229.p1, internal, 236539, 236679
-recovered pasa_asmbl_6229.p1, internal, 237879, 237991
-recovered pasa_asmbl_6229.p1, internal, 239495, 239609
Couldn't classify 56271, 56380
Couldn't classify 59336, 59444
Sorry, prediction pasa_asmbl_6010.p1 fails validation.
(GCG)	 AG	56271-56380	GT	AGG
(GAA)	 AG	59092-59217	GT	AAG
(GTT)	 AG	59336-59444	GA	GTG
-recovered pasa_asmbl_6010.p1, terminal, 59092, 59217
-recovered pasa_asmbl_6010.p1, internal, 56271, 56380
-recovered pasa_asmbl_6010.p1, internal, 59092, 59217
Valid prediction for GeneMark_model.49603_t
Valid prediction for GlimmerHMM_glimmerT_28731-T1
Valid prediction for snap_scaffold_11-snap.2827-T1
Valid prediction for GeneMark_model.49624_t
Valid prediction for CodingQuarry_transcript_8255-T1
Valid prediction for snap_scaffold_11-snap.2806-T1
Valid prediction for Augustus_model.g19172.t1
Valid prediction for GlimmerHMM_glimmerT_28746-T1
Valid prediction for GeneMark_model.49636_t
Valid prediction for GeneMark_model.49609_t
Valid prediction for GeneMark_model.49607_t
Valid prediction for CodingQuarry_transcript_8247-T1
Valid prediction for CodingQuarry_transcript_8248-T1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for GeneMark_model.49625_t
Valid prediction for snap_scaffold_11-snap.2826-T1
Valid prediction for GlimmerHMM_glimmerT_28739-T1
Valid prediction for GlimmerHMM_glimmerT_28740-T1
Valid prediction for CodingQuarry_transcript_8250-T1
Valid prediction for GeneMark_model.49617_t
Valid prediction for CodingQuarry_transcript_8252-T1
Valid prediction for GlimmerHMM_glimmerT_28734-T1
Valid prediction for GeneMark_model.49613_t
Valid prediction for snap_scaffold_11-snap.2836-T1
Valid prediction for snap_scaffold_11-snap.2808-T1
Valid prediction for Augustus_model.g19183.t1
Valid prediction for snap_scaffold_11-snap.2834-T1
Valid prediction for snap_scaffold_11-snap.2812-T1
Valid prediction for GlimmerHMM_glimmerT_28733-T1
Valid prediction for snap_scaffold_11-snap.2841-T1
Valid prediction for HiQ_model.g19186.t1
Valid prediction for Augustus_model.g19188.t1
Valid prediction for pasa_asmbl_7105.p1
Valid prediction for GeneMark_model.49602_t
Valid prediction for snap_scaffold_11-snap.2823-T1
Valid prediction for GlimmerHMM_glimmerT_28728-T1
Valid prediction for GlimmerHMM_glimmerT_28737-T1
Valid prediction for Augustus_model.g19176.t1
Valid prediction for GeneMark_model.49598_t
Valid prediction for GeneMark_model.49595_t
Valid prediction for snap_scaffold_11-snap.2798-T1
Valid prediction for GeneMark_model.49635_t
Valid prediction for snap_scaffold_11-snap.2800-T1
Valid prediction for GeneMark_model.49610_t
Valid prediction for GeneMark_model.49631_t
Valid prediction for GeneMark_model.49592_t
Valid prediction for GeneMark_model.49605_t
Valid prediction for snap_scaffold_11-snap.2818-T1
Valid prediction for GeneMark_model.49608_t
Valid prediction for GeneMark_model.49621_t
Valid prediction for Augustus_model.g19174.t1
Valid prediction for GeneMark_model.49599_t
Valid prediction for GlimmerHMM_glimmerT_28732-T1
Valid prediction for GlimmerHMM_glimmerT_28743-T1
Valid prediction for Augustus_model.g19179.t1
Valid prediction for GeneMark_model.49638_t
Valid prediction for snap_scaffold_11-snap.2832-T1
Sorry, intron length (7) is less than minimum required (10)
Valid prediction for Augustus_model.g19175.t1
Valid prediction for GeneMark_model.49604_t
Valid prediction for GlimmerHMM_glimmerT_28727-T1
Valid prediction for snap_scaffold_11-snap.2817-T1
Valid prediction for Augustus_model.g19182.t1
Valid prediction for snap_scaffold_11-snap.2833-T1
Valid prediction for snap_scaffold_11-snap.2804-T1
Valid prediction for snap_scaffold_11-snap.2810-T1
Valid prediction for snap_scaffold_11-snap.2829-T1
Valid prediction for Augustus_model.g19177.t1
Valid prediction for GeneMark_model.49620_t
Valid prediction for GeneMark_model.49629_t
Valid prediction for GeneMark_model.49600_t
Valid prediction for snap_scaffold_11-snap.2837-T1
Valid prediction for Augustus_model.g19178.t1
Couldn't classify 171788, 172294
Sorry, prediction pasa_asmbl_7101.p2 fails validation.
(GGA)	 TA	171788-172294	CT	GAC
Valid prediction for GeneMark_model.49597_t
Valid prediction for GeneMark_model.49612_t
Valid prediction for snap_scaffold_11-snap.2814-T1
Valid prediction for GeneMark_model.49623_t
Valid prediction for GeneMark_model.49593_t
Valid prediction for snap_scaffold_11-snap.2839-T1
Valid prediction for snap_scaffold_11-snap.2821-T1
Valid prediction for GeneMark_model.49594_t
Valid prediction for GeneMark_model.49615_t
Valid prediction for CodingQuarry_transcript_8251-T1
Valid prediction for snap_scaffold_11-snap.2811-T1
Valid prediction for GeneMark_model.49633_t
Valid prediction for snap_scaffold_11-snap.2828-T1
Valid prediction for snap_scaffold_11-snap.2819-T1
Valid prediction for Augustus_model.g19173.t1
Valid prediction for snap_scaffold_11-snap.2843-T1
Valid prediction for Augustus_model.g19184.t1
Valid prediction for snap_scaffold_11-snap.2807-T1
Valid prediction for GlimmerHMM_glimmerT_28735-T1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 15793, rend_intergenic: 9602  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 62265, rend_intergenic: 57215  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 73573, rend_intergenic: 68437  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 88085, rend_intergenic: 84107  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 100064, rend_intergenic: 88375  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 106840, rend_intergenic: 100091  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 131412, rend_intergenic: 127796  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 138140, rend_intergenic: 133423  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 151434, rend_intergenic: 144890  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 156696, rend_intergenic: 152389  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 165690, rend_intergenic: 161365  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 170687, rend_intergenic: 169985  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 231279, rend_intergenic: 226845  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 234544, rend_intergenic: 232215  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 237940, rend_intergenic: 234835  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 249828, rend_intergenic: 237993  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 252071
-exon list size: 748


building trellis

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62.4    
62.5    
62.7    
62.8    
62.9    
63.1    
63.2    
63.3    
63.5    
63.6    
63.7    
63.9    
64.0    
64.1    
64.3    
64.4    
64.5    
64.7    
64.8    
64.9    
65.1    
65.2    
65.3    
65.5    
65.6    
65.7    
65.9    
66.0    
66.1    
66.3    
66.4    
66.5    
66.7    
66.8    
66.9    
67.1    
67.2    
67.3    
67.5    
67.6    
67.7    
67.9    
68.0    
68.1    
68.3    
68.4    
68.5    
68.7    
68.8    
68.9    
69.1    
69.2    
69.3    
69.5    
69.6    
69.7    
69.9    
70.0    
70.1    
70.3    
70.4    
70.5    
70.7    
70.8    
70.9    
71.1    
71.2    
71.3    
71.5    
71.6    
71.7    
71.9    
72.0    
72.1    
72.3    
72.4    
72.5    
72.7    
72.8    
72.9    
73.1    
73.2    
73.3    
73.5    
73.6    
73.7    
73.9    
74.0    
74.1    
74.3    
74.4    
74.5    
74.7    
74.8    
74.9    
75.1    
75.2    
75.3    
75.5    
75.6    
75.7    
75.9    
76.0    
76.1    
76.3    
76.4    
76.5    
76.7    
76.8    
76.9    
77.1    
77.2    
77.3    
77.5    
77.6    
77.7    
77.9    
78.0    
78.1    
78.3    
78.4    
78.5    
78.7    
78.8    
78.9    
79.1    
79.2    
79.3    
79.5    
79.6    
79.7    
79.9    
80.0    
80.1    
80.3    
80.4    
80.5    
80.7    
80.8    
80.9    
81.1    
81.2    
81.3    
81.5    
81.6    
81.7    
81.9    
82.0    
82.1    
82.3    
82.4    
82.5    
82.7    
82.8    
82.9    
83.1    
83.2    
83.3    
83.5    
83.6    
83.7    
83.9    
84.0    
84.1    
84.3    
84.4    
84.5    
84.7    
84.8    
84.9    
85.1    
85.2    
85.3    
85.5    
85.6    
85.7    
85.9    
86.0    
86.1    
86.3    
86.4    
86.5    
86.7    
86.8    
86.9    
87.1    
87.2    
87.3    
87.5    
87.6    
87.7    
87.9    
88.0    
88.1    
88.3    
88.4    
88.5    
88.7    
88.8    
88.9    
89.1    
89.2    
89.3    
89.5    
89.6    
89.7    
89.9    
90.0    
90.1    
90.3    
90.4    
90.5    
90.7    
90.8    
90.9    
91.1    
91.2    
91.3    
91.5    
91.6    
91.7    
91.9    
92.0    
92.1    
92.3    
92.4    
92.5    
92.7    
92.8    
92.9    
93.1    
93.2    
93.3    
93.5    
93.6    
93.7    
93.9    
94.0    
94.1    
94.3    
94.4    
94.5    
94.7    
94.8    
94.9    
95.1    
95.2    
95.3    
95.5    
95.6    
95.7    
95.9    
96.0    
96.1    
96.3    
96.4    
96.5    
96.7    
96.8    
96.9    
97.1    
97.2    
97.3    
97.5    
97.6    
97.7    
97.9    
98.0    
98.1    
98.3    
98.4    
98.5    
98.7    
98.8    
98.9    
99.1    
99.2    
99.3    
99.5    
99.6    
99.7    
99.9    
-found 38 predictions from path traversal
Error with prediction: snap lend_intergenic: 15793, rend_intergenic: 9602  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 62265, rend_intergenic: 57215  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 73573, rend_intergenic: 68437  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 88085, rend_intergenic: 84107  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 100064, rend_intergenic: 88375  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 106840, rend_intergenic: 100091  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 131412, rend_intergenic: 127796  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 138140, rend_intergenic: 133423  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 151434, rend_intergenic: 144890  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 156696, rend_intergenic: 152389  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 165690, rend_intergenic: 161365  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 170687, rend_intergenic: 169985  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 231279, rend_intergenic: 226845  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 234544, rend_intergenic: 232215  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 237940, rend_intergenic: 234835  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 249828, rend_intergenic: 237993  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 20 predictions persist after filtering for low support

-building DP trellis

-building trellis in range 1 - 20713
-exon list size: 25


building trellis

3.7    
7.4    
11.1    
14.8    
18.5    
22.2    
25.9    
29.6    
33.3    
37.0    
40.7    
44.4    
48.1    
51.9    
55.6    
59.3    
63.0    
66.7    
70.4    
74.1    
77.8    
81.5    
85.2    
88.9    
92.6    
96.3    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support

-building DP trellis

-building trellis in range 1 - 19262
-exon list size: 22


building trellis

4.2    
8.3    
12.5    
16.7    
20.8    
25.0    
29.2    
33.3    
37.5    
41.7    
45.8    
50.0    
54.2    
58.3    
62.5    
66.7    
70.8    
75.0    
79.2    
83.3    
87.5    
91.7    
95.8    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support

-building DP trellis

-building trellis in range 1 - 18972
-exon list size: 20


building trellis

4.5    
9.1    
13.6    
18.2    
22.7    
27.3    
31.8    
36.4    
40.9    
45.5    
50.0    
54.5    
59.1    
63.6    
68.2    
72.7    
77.3    
81.8    
86.4    
90.9    
95.5    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support

-building DP trellis

-building trellis in range 1 - 16324
-exon list size: 18


building trellis

5.0    
10.0    
15.0    
20.0    
25.0    
30.0    
35.0    
40.0    
45.0    
50.0    
55.0    
60.0    
65.0    
70.0    
75.0    
80.0    
85.0    
90.0    
95.0    
-found 1 predictions from path traversal

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support

-building DP trellis

-building trellis in range 4100 - 16324
-exon list size: 15


building trellis

5.9    
11.8    
17.6    
23.5    
29.4    
35.3    
41.2    
47.1    
52.9    
58.8    
64.7    
70.6    
76.5    
82.4    
88.2    
94.1    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support