-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_1074

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Couldn't classify 2813, 3087
Sorry, prediction GeneMark_model.108848_t fails validation.
(AGA)	 AG	2813-3087	GT	CAG
-recovered GeneMark_model.108848_t, internal, 2813, 3087

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Couldn't classify 2957, 3117
Sorry, prediction snap_scaffold_1074-snap.1-T1 fails validation.
(ATG)	 GA	242-295	GT	AGG
(ATG)	 AG	904-994	GT	ATG
(CGA)	 AG	2596-2637	GT	AGG
(GGC)	 AG	2957-3117	GT	GCG
-recovered snap_scaffold_1074-snap.1-T1, initial, 242, 295
-recovered snap_scaffold_1074-snap.1-T1, initial, 904, 994
-recovered snap_scaffold_1074-snap.1-T1, internal, 904, 994
-recovered snap_scaffold_1074-snap.1-T1, internal, 2596, 2637
-recovered snap_scaffold_1074-snap.1-T1, internal, 2957, 3117
Couldn't classify 2957, 3020
Sorry, prediction Augustus_model.g41507.t1 fails validation.
(ATG)	 CG	2598-2637	GT	AGG
(GGC)	 AG	2957-3020	GT	TGG
-recovered Augustus_model.g41507.t1, initial, 2598, 2637
-recovered Augustus_model.g41507.t1, internal, 2957, 3020

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 3366
-exon list size: 10


building trellis

8.3    
16.7    
25.0    
33.3    
41.7    
50.0    
58.3    
66.7    
75.0    
83.3    
91.7    
-found 1 predictions from path traversal

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support