-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_1037

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for snap_scaffold_1037-snap.1-T1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Couldn't classify 1685, 1729
Couldn't classify 2609, 3434
Sorry, prediction GeneMark_model.108789_t fails validation.
(AGA)	 AG	1685-1729	GT	GAG
(AGA)	 AG	1757-1927	GT	GAG
(ACA)	 AG	2127-2339	GT	GAG
(ACA)	 AG	2363-2587	GT	GAG
(AGA)	 AG	2609-3434	GT	GAG
-recovered GeneMark_model.108789_t, internal, 1685, 1729
-recovered GeneMark_model.108789_t, internal, 1757, 1927
-recovered GeneMark_model.108789_t, internal, 2127, 2339
-recovered GeneMark_model.108789_t, internal, 2363, 2587
-recovered GeneMark_model.108789_t, internal, 2609, 3434

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 3502
-exon list size: 11


building trellis

7.7    
15.4    
23.1    
30.8    
38.5    
46.2    
53.8    
61.5    
69.2    
76.9    
84.6    
92.3    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support